TCONS_00055816 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00055816
Unique Name	TCONS_00055816
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	380

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_260:22781..44688+
coding sequence from alignment at scaffold_260:22781..44688+

transcript sequence

>TCONS_00055816 ID=TCONS_00055816|Name=TCONS_00055816|organism=Clytia hemisphaerica|type=transcript|length=380bp
aaaaaaaccagcaaaagaaagaaaacatggcTGCACGTGCAGCTGTTAGG
AAAGACTCAACAAATTCCAAGTTTGAAGAACTTTGTCACCTATGGCTATT
TGAAACAGCTGCATATAGATTTTGTAGaagttttttagattttgaaaatt
gctttGAATGCTTGTTACGTTATGGTAGTATCTTGAAGCACTTGATTGCC
TTAGATGGTCATCTCCAGAAGCAGGAACCAACATCTTGGCATTTCTTTAT
CGAATTGAtcatccaaagttttgaaacagaaaacaagaaaggattacttc
AGCTCTTGAACCagGttgataaattaaattttcaaaacaaagacaAGAGA
AATTTACAATTATTTCTAAATACAAAGGTA

Run BLAST on NCBI

protein sequence of TCONS_00055816-protein

>TCONS_00055816-protein ID=TCONS_00055816-protein|Name=TCONS_00055816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=126bp
KNQQKKENMAARAAVRKDSTNSKFEELCHLWLFETAAYRFCRSFLDFENC
FECLLRYGSILKHLIALDGHLQKQEPTSWHFFIELIIQSFETENKKGLLQ
LLNQVDKLNFQNKDKRNLQLFLNTKV

Run BLAST on NCBI

transcript from alignment at scaffold_260:22781..44688+

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00055816 ID=TCONS_00055816|Name=TCONS_00055816|organism=Clytia hemisphaerica|type=transcript|length=21908bp|location=Sequence derived from alignment at scaffold_260:22781..44688+ (Clytia hemisphaerica)
aaaaaaaccagcaaaagaaagaaaacatggcTGCACGTGCAGCTGTTAGG
AAAGACTCAACAAATTCCAAGTTTGAAGAACTTTGTCACCTATGGCTATT
TGAAACAGCTGCATATAGATTTTGTAGaagttttttagattttgaaaatt
gctttGAATGCTTGTTACGTTATGGTAGTATCTTGAAGCGtaagatattt
ttctcttcactgtttttatatgttttaccgtggaagtcgggtaacttgca
tcagtggaggctaatgtAATATGAATAGCCCtaaaatgacctggctggtt
cttaaaatacaaagttaaagcaaaacaaaaatggtagagtagagctgcga
gcggagctgcatctgcgtagttcatttgttttgaaattttgctgctttgt
tTGATTCaagtgcgtttggtttgggaacaaCGCGAAATGCTAccgatgtc
taaacttttcaatatatctccagcaGTCACGggaatccttgcatttgcac
aggGTTCAACAGTCAAGCACATCTGTCCAAATGAGCGGGCTGTACATTTG
AACGGGGTTTCTGACACTCAGTTCAAATGAGATAggccagacccgatcaa
tcgaacttgtcgaaccaattgaacaatcgaactaatcgaactccatcgag
cGATTAAagtacgattaaaaaaattaatcgaactctaagattttttaaaa
gattgtgagtgttccattaagtttgatcaatgggtttcggttcgatcagt
tcgataaatcaattttgttcgacaagtttgtgctgctctgccaccgtata
tattagcttcttttcaaagccaaattcggaatgcaaatcgggaaattact
tccgataacggattagtacacacttttcctgtatccttttagcgccagag
gcggtttgttggggagtagcaacagaggggctacggactttattccggat
agacaaatatccgggtacaataaacgtcaacctgttaagtccgggaactg
tcgaaatggcaatcgcatgccaggacaaagtttttgcaagcaagGGAAGa
tatatgaggatttaatatcatcgaactaatcgaactatttactgaccgaa
ctaatcgaactgctattgcttcaaaaattgtgagtgttcgattaggttcg
attaatttttttaatcgaactttaatcgttcgatggagttcgattagttc
gattgttcgattggttcgacaagttcgattgatcgggtctgggaTCAGGC
TAAAAGAGTGAAAATGAATagaaatgaacttcaaactaaAAACGGGGGAA
AACGAAGAATAccgggaactttatttttctattagaagtttcttcaatct
tccaagaaaccaggggatgtcaatcgaaaatttcGATTGTCGAACCGATC
GGAtataatcgaaaccaatcgaagtgattgatcgaATCGATCGAAGCCAA
TCGAAGTGATCGATCGAAacgatcgaagtcaatcgaagatTTAGATCATT
TTAAGattgatttggttcgattgtattcgattggCTTCAATTGATTTggt
caatcacttcgattggtttcgattataTTCGATCGGTTCGacaattttca
gttttcatttttattatggGAATACAATTGCGATCATTTATATCCAGGTG
AAACGTGTATTTTCTACATTTTCCAACGTCGTAATATCATATTGATACAC
ATCCATTGGTGAGGGCGAGAATCTGGAAACCCTCTGGAGAATACCCTCGT
ATCAGAGATCCGGTGGAGCACTCCGCCAGCCtccgccccactggaaaatt
tagccaaaaaaTAGTCGTCGGTGGAAAAAATAACCTGAAGTTTTAACCCA
CTTTAAAACAACCAAATGACTTTACTCCTCATTTTTATCCACACtgaagg
aaaaaattttcaccgGGGCGGCATTGAGACAGTGGCGTGTGAGCgagaga
atgaaaaaaaaacgccAATACagtataaagaaaagaaaaaccaaCGAAGT
TACAGTCTATTCATTAATTTGATTGTAATGATCAATGgcctcatttttta
tttttggccacTTTTTTAATGTTGTATATATTACGTAGCGTATATAATTT
TATGAATtgttaaatttgataaaaaaggtGGTTCTTGTTTTCCTCTTCAC
GACTCTCAAGCAGCACGCTCTCTGTAAACAGCTCATAATGGTAACAAACA
ACCAGTAACATTGTTGATAATAATACCGACAGTACTCCAAAGGGCCATAA
CTTTTAAAGCAAATACTACTTTTGCTTGctttgtttttgcatttttggag
TCTTCCTTAAATTCTGCGTCGATCGGTAGGTGATTTGTAGGCACTTAAAG
CAAAACCAAGGCTACCGGAGcctctgaaagtcaaacttttgatgaaattc
AATGAGGTCAAAATTCTTAAAGTGGCTTGGCAGTGAACGTGAAATAGTGT
TAggtctttttttgtatttttctcacCGGTTTTCATCGGGACGGATCCTT
CATAGTTCGcaccccccctttataaaggggggggtagcgatgttcagaaa
atctcagaaaggggggggtaagagaattttttCTAGAAAGGGGGAAGTTT
TCAGAAAGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNTAGAATTATggtaggattttaaaattttgaggggggtagcatc
aaattttaaaagggggaagaacctagggtaggggggggtagctctagggt
aggggggggtagtgacccccttccgaactatgtccttgaccgggtcactg
atacaggggtgtatcatCCGTTTCTCTCGCCATTGTGCCGAGTCAACAAG
AGCTATTGATAATCTTCTCCCGTCTTTCAAGTATCTAATATTGTTCAGTA
CGACCTGAAATGATGGGAAAACAAAAGTATACAATGATCGGGTTAATTTT
TCTACTCTTTTTAACGGCTCAGCTATCACAACTAGTATCACTGCGAATCT
GGAAAAGTTAGCTTTTCACGGGGCATTGGTAGTGGTCAAGTGAtacttga
gacaggggtattcaaTGGACGCTAAACGTCAAAACAGTGTTCATTTATAA
TGTGCGTATAACAACGGGGAACAACGGGGTATGTACAGTGGGTTTTTTTC
TGGCGAATTTTCTATTAACCTAACCTGacctgtgaaacaggggtgtaggT
GAGCTAGACTCTTCTGAGGAGAAAAGAAATACGCACCTGCTGGGTGTGAT
AATTTTCTGCTTTTAGATTCAATATGCTATCTTTCGTAACCGAGGAATAT
AACATGTGTTTGATGACTCTATCGATCGATGCTTCATTATTTTCGTAAGT
TGTCCAGTTTCTCTAATGCTcttcgtttttatttttacttctcccttttc
attttcatctggAACGAAACgcaagtcaaataaaaaataataatatggaT
TTAGCTAATGTAGTCAGACATTTCAGAGACATTTTCTTACATCGCACTTT
CTATCGTAGTTAGGACTCCCCACCATCGCTAGCTGCCGCTGAAGCGCGTT
AGTGACTAGTAACTTTGGATTGTTAAACACGATATATGCATACATCTCTC
TCTGATCCACTTGATCGGTTGGTTTGATGATAAATTTAAGATAAGAAATT
CCCGTAGAAATTCCCGTCCCATAGCGagtaatagcgagtttatgtttaca
aaacaaagtcgatagttgatgtacgacACTATATCACCTTTGCTCACACT
ACTGGGTCAGAAACCGTTCGATTCGGACACACGAACGCTTTTCCATGCGT
GACAAACGGGTTAACCGTTCGCGACGAATGCTTTTGCATTCGTCGTGAAC
GCCCTaccaaaaagttttattgaaacCGTTCGCGACGAACGCTTTTGCTT
TTTAACCCGTTTGTGACAAACGGCTGAAAAAGAAAACCGTTCGTGAAGAA
CGCTTACAAAAATTTGAGATATGAAACCGTACGCAAAGAATGCTTTTCCG
TTTGCCgcgaatgcttttaaagaatcaTTCATAAAACCGTTCGTTTAACA
TACGCAACGAATGGATTTTAATGGGAAAcgatttctaagaaaatttattt
tacatttACTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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attgcaagtatttttttacggaatttcggaaattttggctaaattattcg
gtatttcggaaatcgcaaaccccgtacgccccccatatattagaaggcta
gaaatcttcgatgctgatagtaagaatgttcagaacagacttgagttcta
ctaaaaagtcttatttcgtCGGGGgtgcctagaatttcttttgatttatt
acataaaagaaatcaaaagacattaacgaccaattaccgacaaattcatc
tcctgtctttctttatacctctatggtttGATAAAGAATAGAGTAAGAGA
CAGATGTGTATGCGAGATTTGTTCTCCAAAAACAAGACACGGTGAAAAGT
TATCAGTCCCCACCATTTTTGAAGGAGAGATCCTctttaaaatttacgtt
ttctagttttgaatgtttttattaattgtatatattcaaaaacattcgaa
cacGAAAATCATTGTATCATTACATTagaaaaacaatggaatgactATTA
CTAATGCTTTCGAGCGACTTTCTTTTCCAAAGCGTTCGTTATAAACGCAT
TCTAGAACTCGACACGTCACTAGCGTTTAGTTCGAAAACTTGCACGTTTT
TCTACTTCCTTCCCtttaatttcaagaaaatgttatacattgtaaaaatg
aaaatcaaagctTTTTTTAGAGCGTGGGAGATTTCTATCACGTAACAAGC
AttggaatgtcttctttttcttttaaatgttgcaaaaaaAGGGGAGAAAA
ATGTTGCCCAAGAATGGCGGCCTTCTTGATCTTGATAAAATGACACTGCg
ttgtcttctttttcttcacagAGAGCGGAAATAAATGTTTTAACATCTTT
ATAGCGCATTTCATTTCATCGAGGATTTAATCGATACTTAAAAAGTATCG
ATTAAATCCTTGATGAAATGAAATGCGCTGTAAAGTGAATTTCTATAGAG
GATTGTTTCTGTTTTCTTACCTTGTACCTcgacaaaaaagtaaaatgtca
aggaaaaatcaaatgattctcATCAGTATCAAATAAACTTTCTTTACACC
CTGTGTcagttagcctgggaatccatgctatgatttcttctttgatgaac
tgatggcgaaatgtatagcatggtacgggctgagagtttgaatttctcag
atcctgataacggttgaaaacatagccaatcaaattttgctattctttta
ctggtcacactttcttagagaaagcgcaattttcgaaatttggtttttat
tttagtaagtgaggacagcgctaaattcgaatttcccactgtaaaaaatg
tgagtccaatattggacacacagctcgaacccgtcttgtgtacccgtttg
aagttaaaataaaatgaaatgatttcaattattattaaactttcTTTACA
CCTCAGTGTCTCAGTGACTCTGATTGAAATCAAAGAATAATCAAATGATT
TTAATTTCTATTAAACTTtccttacacccctgtctcagtgactccGATTG
AATAAAACAATAATcgaatgattttaattattattaaactttccttacac
ccctgtctcagtgactccgtttaaagtcaaagaaaaatcatattattttt
atcattaaaatttctttatacCCCTGTCTTGGTGACTCTCTTGGTAAGTC
AAACAAAGATAAAATGATTTTCACCTAAACTTTAAAAACAGTCAATGTGA
GCAAAACCTatgttaaagattttgttttaattgaaaggtctgatgatgct
gatgtagtaaaaacaagtgggacaagattagaaaaaggatttgaaaaatt
aaaaaatacattcaatAAAAAAGCATTCCTCAAACAAAGGGACTTTTACT
AatactttttcgaatgtttttttgtttataatataAAGTTTTCTATTTTA
TAATCTGTAAATTTGCTCAAAGTCAAAATcaactttgttattttttttgt
ttacaaaaccaAAAGAATGCGAggtcacatctcgaaacaacttttgatct
ttcacttgtttgcaggatattgttgcgtaaaaaagtagctttaattTATC
TGGCTCAGCATGAAGACAGtgcctaaaataagctccttttattcccgTAT
AATACCTTTAAGAACAGTTAAGAACGATAATCTTGAGAATTGTTAAGAAG
AGCCATTCAGCacacatttttaaaaacttacaACCGTTTGTGACGAACAG
TTTTTAAACGATTGTTCGAAAGCATTTGCGGTAAACGGAAAAGCATTCTT
CGCGTATGGTTTTAtatctttaaagtttttaaagcgTTCTTCACGAAcgg
ttttctttaaaaaccgttcgtcacaaacggtttcccgttcgtgacgaacg
ctttcattaaaaaaaatcataagcatTCGTCGAACCGATGGAAAAGCGTT
CGTGTGTCCGAATCGAACGTTTTCTGACCCAGCAGtgtcacctaaacaga
cgacggtattttggtgtttttaccgtcgttgAGCAAAGTGGACGATGTGA
GACGGTGAGACATATCattttgctttataccgtccccgcccctcgattta
tctcgaatacataaactcgctaatctTAGATCGGTGGGTATGATCTCTCG
AGATCAGTGGTCGAATTGAATGGAAGagaatcgaatcaatcgaatcaatc
gaattcaATCGAAGTAAATTGAAGTGATTGTTCAAATcgatcgaactcaa
tcgaattgCTCGATTGaacaatcgaaaccaatcgaagtgattgatcgaat
agatcgaatccaatcgaagacgatcgaagatttacatctttttcccattt
tgattgaattcgattgattcgatcaatcacttcgattgagttcgatcgat
tcgaacaatcacttcgatttaCTTCGATTGAATTTGATCGATTCGACTCC
AAATCGAAAGCTcgtcaaaaactatatagaagacaattaaacgggtatat
tcgatttctcagcctaactcgagaaaattgagatggtaattccttataaa
atgaggcattttttcaaaaatgacgtcatagaacAGCTAgggacctcaat
aacttttcatattcaaatttttacttattaagattgatgtgatttgaaat
ctacatcaaaaaacgcttcgaatggtatgtaaaactttgaaattttgcaa
caacaatttttcacttttgcttgtgacgtcatcaattaataaattattct
cggacacgtccggtaaagatttttaaacacgccaagtaaatttttctgac
tctctaaactataaagatttcaaaataagtactcaatatttgtccctcga
attttcactgattcactttttttgatgtcatcagcTGCCTGTCTTTTCTA
ACGCACCCAAACATGACCTAATTCGCTTCATTCAAAGCcgagaaaattaa
aattaaagtttGGCAATCATTACtatgaaaataattgaaaaaattagttt
cccATACTAATCAAAAGTGATGGAGTcaatcaacaaaataaaataaaaaa
accatTTCTATTATAACCATTTCTATTCCCAAGCTAATTAAGTGCGAGTT
TCTAATTACGTCCTAagcaattaaaaaatttcattttactttTACGCTAC
CACTTAGGTGTTCTATTTATAGATGAAGATATCTTCGCANNNNNNNNNNN
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NNNNNNNNNNNNNTCATATAAAATTTCAAcgttatatttgaaatattttt
caagttattcaagaaatactatatttttgagttcactaaatgtcacacta
tttttgaacatGATCCATGCAAGTGATGTCAAATGACTTTGGAcattcgg
tgaaatggtggcagaATTGCCATTCTTTTTTTTGTCAGATAGACCCTTAG
AGGGCTtactgtattttaagaaataaaatatttctagaaataaaatattt
ctaatttgtaatttaagaaatattttatttcttaaaatacgaaaatgaga
aatatccTTATAACTTATCAATGGATGATCCGAATGACATAACACTCCAC
TGATGTAAGGCACAGGTATTGACAGTTTAGGacacaaaaaattgacttca
tatgctgacgtcagcaaattctgctaaaacattacttaaattacgaaaat
gagaaatataatGAACCCGAATGGTATCTGCacgaaattttgctcacaaa
cttgtattggaaggaggagggcttctgcaaaatttcatctcgttttgctg
acgttagcactttttataagaatatttcttaaatttgtaatttgagaaat
aaaatatttctcaaaatactaatttaagaaatatgctcgtaacttttgat
tggaagatggcagcattttcaaattttgcagtcttgtaccacatcatact
ccggagtctcggtccaaatttggaatcaatccgatgacgtcatagatttt
tatggcaaaatcataattttcaacttatgcagccaaacgtgtaagcttgg
ccaaaagctagaaatggccataaattctgaactacgaATAGCNGGAATAG
CCAGTCacccaaattttgctcacaaactcgtattggtaggaggagggctt
ctgcaaattttcatctcgttttgctgacgttagcactttttataagaata
tttcttaaattcgtaatttgagaaataaaatatttctcaaaatactaatt
taagaaatatacTCGTAACTTTTGACTGGAAGATGgcagcattttcaaat
tttgcagtcttgtactacatcatactccggagtctcggtccaaatttgga
atcaatccgatgaggtcatcgatttctatggcaaaatcatcattttcgac
ttatgcagccaaacgtgtaagcttgactaaaagctagaaatggccataaa
ttctgaactacgaATAGCCAATCTCCCAAATTGGATGGAAAACTTCACGA
AAGAGAAATTGCTATCAAACAAACAACATGGGTTCATGGGCAAGCGATCG
ACAGTGACACAACTACTTCACTACTTAGAGAAATGTGTGGACTCGATATC
CAATGATGAAGTTGTTGACGTAATCTATTTCGACTTCACAAAGGCCTTTG
ACACCGTTCCACATCGCAGATTACTAGGAAAACTCGAAGCGTATGGTACC
AGAGGAGGGGTACTCGATTGGATGGTCAATGGAAAGTTATCCAAGAAATG
CCAGGTACAAAGTGGTGTATCACAAGGAAGTGTCTTAGGTCCACTCCTTT
TCgttatttacatcaatgatctaGCTGAAGTCACAAACTTAGAAATGTTC
CTCTTTGCCAATGACACAAATAAGCTGGTTGTAGAAATAAATAACGTTGA
AGATGCGATTAGACTTCAGCACGATATCGAGGCAATGGAAAAGTGATCTG
ATGACTGGTTGTTGAAATTCCATCCTAACAAGTGCCACGTGTTGACACTA
GGGAAATTCTGGAACATTCAACATGCACAACATCACGAGATCGCTGGCTC
TGTCCTAGAACATGTCGATCAAGAGTGGATCTTGAAGTGATTATTATTGT
TAGCGAATTGAATTTCGAAGAGCACATCTACACCAAGATCAAGAAGGCTA
ACTCGATCGTAGGATTGATTAACAGAAGCTTCGACTACCTTTCTCCCGAG
ATGCTCCGCACACTTTTCATTACATTTGAGAGATCTTACCTTGAGTACGC
GCAAGCAGTTTGGTCTCAACGGCTGATAAAACACTCTGATGCAATTGAAA
GTGTCCAACGTAGGGCCACAAGACTTGTCGATGGTTATAGAAACCATTCA
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TCAAAATTTGCCTTATTGTAGTTATAGTTTTCATTAATGCATTCTGTTTC
AAGGTAACATTCGAACGTAAATGATAGTATGTTTAGTAACGGAACTGATC
GAATACTTTAGGTGTTGAGTGATTTTTTTAGCCTATGAGAAGCGCTTAAT
AACTATTAATAACTACTTTGTGGTatataataaagctttacaggtttgca
gaccaccgtgaagacacatgggcctctataaccgctcgtactttttgcaa
tgatctttttgaaatagagtttttttcgcgggctccctggactttccatt
ttgtgttgtctcCCTTGATTTAAGTattcattttttcggcttccttacac
cattcttagATTATtcgtctttcatttttggtcaaatcctctgtcactcg
gTAAGGGAAGCTTTTTTCTTTCGTTATTGCTTGCatcatttttagctttt
ttggctgcataagtcgaaaatgataaatattatatataaatattttattt
ctcaaattacgaatttaagaaatattcttataaaaagtgctaacgtcagc
aaaacgagatgaaatttttcagaagccctcctcctactaatacaagtttg
tgagcaaaattttggcgactggctattcctagttcagaatttatggccgt
tctagcttttggccaagcttacacgtttgactgcataagtcgaaaatgat
gattttgccatagaaatcgatgacgtcatcggattgatttcaaatttgga
ccgagactccggagtatgatgtagTACAAGACtgcgaaatttgaatttgc
tgtcatcttccaatcaaaagtcacgagcatatttcttaaattagtatttt
gagaaatattttatttctcaaattacgaatttaagaaatattcttataaa
aagtgctaacgtcaNgaaatcgatgacgtcattggattgatttcaaattt
ggaccgagactccggagtatgatgtggtacaagactgcaaaatttgaaaa
tgctgccatcttccaatcaaaaggNNNNNNNNNNNNNNNNNNNNNNNNNN
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aagaaataaaatatttcttaaattacaaattagaaatattttatttctag
aaatattttatttcttaaaatacagtaagccccttagagcagttgacggt
cgATTTCGTTTAATGAAATTCAATGGTTCAATTACAAAAAtccagggtgt
ctacgggaccttgaaaaccttgaaaattccgaaaaaaaattcgtaGACAC
CCTGAAATCGGTTCTAAGGGTTCAGTTAACATCGCCtggctatttataaa
tcatgcttcatcgcagaggtttttgtacggaaatttttttatcaaacaga
caaccATACAGGAGTACTGTTAAGTCgggcaacttgcatcagtggaggga
aacttgcatagccatcaaatgactgaccaatcaaagcagcaaaattttaa
acaaatgaactatgcagctgcgctcacagctctactttaccatttttgtt
ttgatttaactttgtattttaatgaccaaccaggtcattcatttgaggac
tatgcatgttagcctccaggCCGActctaaaaaaattttcatttcaggtc
caccgggtgacgaaaaaaaaagttatgtggGCGgccgggaaaattttttt
tttggtccttttcatgatttctaataaaaaaattaggaagaaaaaaatcg
tctCTCTGGCTGTTAGTGTTACCCCACATTctgtctttatattttttctc
tctttcactGAAAGAAATGTGTTGCTATTAATTACAAAAAGCTGTACTTT
GTGATTTTTTCTCAGAATCAACTAATTTTTCATTCtaataaattgatttt
aatatgcataacactatttatttgatctttaacgTCCAGAAAGCATgcta
aataaacaaactttttgaagagtgTTATATAGGAACGATGTAACAGTTTG
AATGAGTCATGAGTAAAGGTTTTTAAGAAGAAAGTTTGATCTGTTATCTA
TTTGGCtcttatgagaaaaaaaatgcgACCGGGTgacaacgaaaaaaaat
ttcacccggccggtggaccggaaaagaaaaaatttttagggTCGGCCCCA
CTGATGCAAGTATCAGGGTATATGACAACCTCTTCCCCCAAGGCAAGGGG
ATTTTGTTcacttttcagattttcataGGGGATCATTGAGGGTTTCCAGA
GTTTCCATGTTTCAAAGAGAGAGATATTCTCAAACCAGGCAATAtgttgt
caataaaactttacCTGTCACTTACCTACCTATTGTACCTATTTGTTGTG
GCTTCTGCTTAAACAGCTCATCCAACTATTAAGTCTAATGCTTTGACATT
TCCTTGAGGCTACTGGAGTCAATGCAATTTCTCTCCAATCTCTGACTTTT
ATGGCAGAAAATACCTCCTTTTCTTTCGTCAAAGTGAAAATTCGGCCTTC
AATGACGTTCCAGGTGTAAATTATTTGGTAACACTGTCTCCATCCTCCGA
GGATTTTGCAAGAATATTGCTTTAGCAATTTTAAAGCCATTAAGTTTGGG
AGCCACCAGAAATAAGCCATGGAGCAAAGAAGATTGAGTATGCATCGCCC
TttaaaagtgtgcaaaattgaaaattgttcaGAAAATGGATACCTTTTAA
ATGCAGATGAAGAAGGAAATTATGTACAGCttaacaattttcaattttgc
tcCCCCCCCCGCTCTAAACCAATCCTAAACCAGATTAAAACCTAAACCAA
GTTATTTTGCAGACTCACAATTAAATAGGAGAAACTGCTTAATTCATATA
AAAATCTCTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNatttaaaaaaaaaatcctttttcagACTTGATTGCCT
TAGATGGTCATCTCCAGAAGCAGGAACCAACATCTTGGCATTTCTTTATC
GAATTGAtcatccaaagttttgaaacagaaaacaagaaaggattacttcA
GCTCTTGAACCaggtttgaaatgaaatttttttgttatcACGTTTTTTAG
AACTGTTTAGAAGAACATttgctttttgagttttaaaaatgctcttaaaa
tgctcttattttcaccattttgtgagtatttttgtccatattcctaagaa
attgggtgttttataGATATTTACTCAGCCATTACATTCATTCAATTATG
TTTTAGTTCTTTGTCTATTTAAGACTTTATTTTCTACTTTAGGttgataa
attaaattttcaaaacaaagacaAGAGAAATTTACAATTATTTCTAAATA
CAAAGGTA

Coding sequence (CDS) from alignment at scaffold_260:22781..44688+

>TCONS_00055816 ID=TCONS_00055816|Name=TCONS_00055816|organism=Clytia hemisphaerica|type=CDS|length=1134bp|location=Sequence derived from alignment at scaffold_260:22781..44688+ (Clytia hemisphaerica)
aaaaaccagcaaaagaaagaaaacatggcTGCACGTGCAGCTGTTAGGAA
AGACTCAACAAATTCCAAGTTTGAAGAACTTTGTCACCTATGGCTATTTG
AAACAGCTGCATATAGATTTTGTAGaagttttttagattttgaaaattgc
tttGAATGCTTGTTACGTTATGGTAGTATCTTGAAGCACTTGATTGCCTT
AGATGGTCATCTCCAGAAGCAGGAACCAACATCTTGGCATTTCTTTATCG
AATTGAtcatccaaagttttgaaacagaaaacaagaaaggattacttcAG
CTCTTGAACCagGttgataaattaaattttcaaaacaaagacaAGAGAAA
TTTACAATTATTTCTAAATACAAAGGTAaaaaaccagcaaaagaaagaaa
acatggcTGCACGTGCAGCTGTTAGGAAAGACTCAACAAATTCCAAGTTT
GAAGAACTTTGTCACCTATGGCTATTTGAAACAGCTGCATATAGATTTTG
TAGaagttttttagattttgaaaattgctttGAATGCTTGTTACGTTATG
GTAGTATCTTGAAGCACTTGATTGCCTTAGATGGTCATCTCCAGAAGCAG
GAACCAACATCTTGGCATTTCTTTATCGAATTGAtcatccaaagttttga
aacagaaaacaagaaaggattacttcAGCTCTTGAACCagGttgataaat
taaattttcaaaacaaagacaAGAGAAATTTACAATTATTTCTAAATACA
AAGGTAaaaaaccagcaaaagaaagaaaacatggcTGCACGTGCAGCTGT
TAGGAAAGACTCAACAAATTCCAAGTTTGAAGAACTTTGTCACCTATGGC
TATTTGAAACAGCTGCATATAGATTTTGTAGaagttttttagattttgaa
aattgctttGAATGCTTGTTACGTTATGGTAGTATCTTGAAGCACTTGAT
TGCCTTAGATGGTCATCTCCAGAAGCAGGAACCAACATCTTGGCATTTCT
TTATCGAATTGAtcatccaaagttttgaaacagaaaacaagaaaggatta
cttcAGCTCTTGAACCagGttgataaattaaattttcaaaacaaagacaA
GAGAAATTTACAATTATTTCTAAATACAAAGGTA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035141	XLOC_035141	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00055816-protein	TCONS_00055816-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00055816-exon-scaffold_260-1491911889:22781..22969	TCONS_00055816-exon-scaffold_260-1491911889:22781..22969	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1510915933:22781..22969	TCONS_00055816-exon-scaffold_260-1510915933:22781..22969	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1575043694:22781..22969	TCONS_00055816-exon-scaffold_260-1575043694:22781..22969	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1491911889:44269..44393	TCONS_00055816-exon-scaffold_260-1491911889:44269..44393	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1510915933:44269..44393	TCONS_00055816-exon-scaffold_260-1510915933:44269..44393	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1575043694:44269..44393	TCONS_00055816-exon-scaffold_260-1575043694:44269..44393	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1491911889:44623..44688	TCONS_00055816-exon-scaffold_260-1491911889:44623..44688	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1510915933:44623..44688	TCONS_00055816-exon-scaffold_260-1510915933:44623..44688	Clytia hemisphaerica	exon
TCONS_00055816-exon-scaffold_260-1575043694:44623..44688	TCONS_00055816-exon-scaffold_260-1575043694:44623..44688	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_260	supercontig	scaffold_260:22781..44688 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	5.94835	12.6189	8.47901	9.87271	10.2191	8.60166	14.3454	11.26	5.59354	5.62958	0	0	0.15928	0	0	0	0	0	0	0	9.28488	20.5378	0	0	0	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00055816 vs. Swiss-Prot (Human)

BLAST of TCONS_00055816 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00055816 (transcript) - C. hemisphaerica