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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056468 ID=TCONS_00056468|Name=TCONS_00056468|organism=Clytia hemisphaerica|type=transcript|length=1235bp
ATATCATTTAACGTTCAATTGACAGATACTTAAGGAGCCGACATGAAGTG
GTTTATCATATTGACAAGTTTCATTTTGTGTGCACGTGCCATCGAAGATG
ACAGTTATATGGATTACATGAGTAGAAGATCACACTCCTGGCCGCTTCCC
AATCGACGGGAGTTCGGAAATCTCGGAAGATATTATTACGATGTTATTGA
AAAAGATGATCCGTTTCCATTGGAACAAGAGAGAGAGTTGGATGTTAAGG
AAACCTCCGCAGAAAGATTAGGAATGGATGGTGACGACGAAAATCGAGAA
ATATCGTTAGCAGAACTTGAGAGAAAAGACAACGAAATCCATGAGCAAGA
CCTTGCTGTATCTCGAAGTCTCAACGGAAAACCGCTTAGAATCCCATCCA
TGTTTGGGGAACAAAGACGCGTGCTGAACGACGAAAAGCGAGAATTATCG
TTGGCAGAACTCGAGAGAAAAGACAACGAAATCCATGAGCAAGACCTTGC
TGCATCTCGAAGTCTCAACGGAAAACCTCTTAGAATCGCATCCATGTTTG
GGGAGCGAAGACGCGAGCTGAACGACGAAAAACGAGAATTATCGTTGGCA
GAGCTTGAGAGAAAAGACAACGAAATCCATGAGCAAGACCTTGCTGCATC
TCGAAGTCTCAACGGAAAACCGCTTAGAATCGCATCCATGTTTGGGGAGC
GAAGACGCGAGCTGAACGACGAAAAACGAGAATTATCGTTGGCAGAACTT
GAGAGAAAAGACAACGAAATCTATGAGCAAGACCTTGCTGCATCTCGAAG
TCTCAACGGAAAACCGCTTAGAATCCCATCCATGTTTGGGGAGCGAAGAC
GCGAGCTGAACGACGAAAAACGAGAATTATCGTTGGCAGAGCTTGAGAGA
AAAGACAACGAAATCCATGAGCAAGACCTTGCTGCATCTCGAAGTCTCAA
CGGAAAACCGCTTAGAATCCCATCCATGTTTGGGGAACAAAGACGCGAGC
TGAACGACGAAAAGCGAGAATTATCGTTGGCAGAACTTGAGAGAAAAGAC
AACGAAATCCATGAGCAAGACCTTGCTGCATCTCGAAGTCTCAACGGAAA
ACCGCTTAGAATCCCATCCATGTTTGGGGAGCGAAGACGCGAGCTGAACG
ACGAAAAACGAGAATTATCGTTGGCAGAGCTTGAAAGAAAAGACAACGAA
ATCCATGAGCAAGACCTTGCTGCATCTCAAAAGCT Run BLAST on NCBI transcript from alignment at scaffold_276:29080..31402- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056468 ID=TCONS_00056468|Name=TCONS_00056468|organism=Clytia hemisphaerica|type=transcript|length=2323bp|location=Sequence derived from alignment at scaffold_276:29080..31402- (Clytia hemisphaerica)
ATATCATTTAACGTTCAATTGACAGATACTTAAGGTGAGCAGTTTTTAGT
TAAAGTTGAAGCATAAAACACCTCCTTCTCATAGGATTTTTTCAGCCAGT
AGGGATAAAAATAACTGACTGGAACTCGATGGGGACTACATAATTTTTAT
GGCTGGGGATTTAAATTTCATTGTTTTTAAGTCAGAAAATTCAGTGGGGG
TCGAAAAAATAGCATAATTTTTTGCAGCGACGATTAGTGTGGTGTGATTA
GATTATTTTCAGTGGGGACAAATTTAAAAGTAAAATTTTCCACTGGGGAC
GATATTTTGGCCAAAATTTCCAGTGAAAGGGGTCCCAGTAAGTCTGGGAG
AAGAGGGTGTCAAAAGCACTGTGTTTTATATGAACCCTTTGAAATCCTTT
GATCGGAGCTTTTTTAAATTGGTATACCCTAATGGTAGCACTACTCTATA
GCGGTGTAAATGCATCGATAGCTCTAGATCTAGTTTTATTAAACACTTAT
TCGCAATTGAACGTTTAAAAAAGTTTAATTGCTCCTCTTTAAAATTTAAG
AATCACTTAAGAACATCTAAAGGCTCACTTCAATGCACCTTTTCGACCGT
AGCCGCCAATTGCCGCGCAGGCATTTTTTTTGTCCGTTTTACCACCCTAA
AACCGTCCCAGTCTTTTTTTCGCACCTAAAGACAATGGAAAAAAGTGTAA
ATAAAGGATTGGGTCGAGTTTACGGTGGTAAAGTAAATTATAAAGTGGTA
CAACGCTCGAAAAGGTGTATATATGTAATTTTTATGGATAAAAACTTTAT
TTTTAATTATTCAAATTTATAATCATTGTAGGAGCCGACATGAAGTGGTT
TATCATATTGACAAGTTTCATTTTGTGTGCACGTGCCATCGAAGATGACA
GTTATATGGATTACATGAGTAGAAGATCACACTCCTGGCCGCTTCCCAAT
CGACGGGAGTTCGGAAATCTCGGAAGATATTATTACGATGTTATTGAAAA
AGATGATCCGTTTCCATTGGAACAAGAGAGAGAGTTGGATGTTAAGGAAA
CCTCCGCAGAAAGATTAGGAATGGATGGTGACGACGAAAATCGAGAAATA
TCGTTAGCAGAACTTGAGAGAAAAGACAACGAAATCCATGAGCAAGACCT
TGCTGTATCTCGAAGTCTCAACGGAAAACCGCTTAGAATCCCATCCATGT
TTGGGGAACAAAGACGCGTGCTGAACGACGAAAAGCGAGAATTATCGTTG
GCAGAACTCGAGAGAAAAGACAACGAAATCCATGAGCAAGACCTTGCTGC
ATCTCGAAGTCTCAACGGAAAACCTCTTAGAATCGCATCCATGTTTGGGG
AGCGAAGACGCGAGCTGAACGACGAAAAACGAGAATTATCGTTGGCAGAG
CTTGAGAGAAAAGACAACGAAATCCATGAGCAAGACCTTGCTGCATCTCG
AAGTCTCAACGGAAAACCGCTTAGAATCGCATCCATGTTTGGGGAGCGAA
GACGCGAGCTGAACGACGAAAAACGAGAATTATCGTTGGCAGAACTTGAG
AGAAAAGACAACGAAATCTATGAGCAAGACCTTGCTGCATCTCGAAGTCT
CAACGGAAAACCGCTTAGAATCCCATCCATGTTTGGGGAGCGAAGACGCG
AGCTGAACGACGAAAAACGAGAATTATCGTTGGCAGAGCTTGAGAGAAAA
GACAACGAAATCCATGAGCAAGACCTTGCTGCATCTCGAAGTCTCAACGG
AAAACCGCTTAGAATCCCATCCATGTTTGGGGAACAAAGACGCGAGCTGA
ACGACGAAAAGCGAGAATTATCGTTGGCAGAACTTGAGAGAAAAGACAAC
GAAATCCATGAGCAAGACCTTGCTGCATCTCGAAGGCTTAACGGAAAACC
TCTTAGAATCCCATCCATGTTTGGGGAGCGAAGACGCGAGCTGAACGACG
AAAAGCGAGAATTATCGTTGGTAGAGCTTGAGAGAAAAGACAACGAAATC
CATGAGCAAGACCTTGCTGTATCTCGAAGTCTCAACGGAAAACCTCTTAG
AATCCCATCCATGCTTGGGGAACGAAGACGAGAGCTGAGCGACAACGAAA
AGCGAGAATTATCGTTGGCAGAGCTTGAGAGAAAAGACAACAAAATTCAT
GAGCAAGACCTTGCTGTATCTCGAAGTCTCAACGGAAAACCGCTTAGAAT
CCCATCCATGTTTGGGGAGCGAAGACGCGAGCTGAACGACGAAAAACGAG
AATTATCGTTGGCAGAGCTTGAAAGAAAAGACAACGAAATCCATGAGCAA
GACCTTGCTGCATCTCAAAAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056468-exon-scaffold_276-1575043694:31369..31402 | TCONS_00056468-exon-scaffold_276-1575043694:31369..31402 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1575043694:29518..30571 | TCONS_00056468-exon-scaffold_276-1575043694:29518..30571 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1575043694:29080..29226 | TCONS_00056468-exon-scaffold_276-1575043694:29080..29226 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1510915933:31369..31402 | TCONS_00056468-exon-scaffold_276-1510915933:31369..31402 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1510915933:29518..30571 | TCONS_00056468-exon-scaffold_276-1510915933:29518..30571 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1510915933:29080..29226 | TCONS_00056468-exon-scaffold_276-1510915933:29080..29226 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1491911889:31369..31402 | TCONS_00056468-exon-scaffold_276-1491911889:31369..31402 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1491911889:29518..30571 | TCONS_00056468-exon-scaffold_276-1491911889:29518..30571 | Clytia hemisphaerica | exon |
| TCONS_00056468-exon-scaffold_276-1491911889:29080..29226 | TCONS_00056468-exon-scaffold_276-1491911889:29080..29226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:29080..31402 - |
Blast
The following BLAST results are available for this feature:
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