TCONS_00056654 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056654
Unique NameTCONS_00056654
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3566

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056654 ID=TCONS_00056654|Name=TCONS_00056654|organism=Clytia hemisphaerica|type=transcript|length=3566bp
CTACCACTCACTCGGTCGTTTCAAAGCGTTCTTGCAATACCACCACAGCG
ATCCTTCAAATATAGGAAGTCAATTTGAAAAACAAGATCTACACCATTTA
CATTATTCCATCGAGAAGTTGAAGACTATTAATATTATCATCGCACAACA
GGCATGGAAGACCACATTATGAACGAAGAACAAATCGGTGAATATCGAGA
agcttttgaactttttgataagAATAACGATGGAAATATCAGCATCAAAG
AATTAGAAAAAGTTATGAATAGTCTGGGACAGAACCCATCAGAAGCTGAG
CTCCAAGATATGATCAACGAAGTAGATTCGGACGGTAATGGAACGATTGA
TTTCCCAGAATTTTTAAGCATGATGGCGCGCAAGATACGGGATACTGACA
CCGAAGAAGAAATCAAAGAGgcGTTTCGAGTGTTCGACAGGGATGGTAAT
GGTTACATCAGTGCATTGGAATTACGACATGTGATGACAAACCTTGGTGA
AAAGTTAACTGAAGATGAAGTGGATGAGATGATTGCAGAAGCGGATCAAG
ATGGAGATGGACAAGTTAATTATGAAGAGTTCACCAGACTGATGTTATCA
ACCCCAAGATGACGAAAATGCTCATGAGGTCAACACATGGAAATACATCA
ACAGACAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTATATTTC
TAGTGTTGTTTAATGTAAAATTCAAGAATATTGTACACATTATTATAGtg
tattttttctcttttttagtaaAAGTTTCGGCGGGAAAAATTGTAAATGT
ATTTATAAGAagatattaaaagaaaaatatttaaaatatttacaaactta
caaatagtataaaacTCCCTCACATTATTAAAAGATTTTCAtcatttgat
caaaatttcacacccctgtctcgcagccccggtggagcttctTCTCACGG
CGAAATTCCAATaaagatagaaattctatttttccctgacacaggggtgt
aattttGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGGCCTCAG
TGTCGACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGGTAGTGC
GAGAGATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCTTTCTAA
TATAAGTGTTCCAAAATGACGAAAATCGATTacattacttcgaataaacg
gtAACTTTTTTAGATTGTCCcgtcgaataaacgcccctcattaaaggaaa
agttttttatatGATGGCTCCCAAAATAAACGCCTCCTCTCTAGAAGGGA
CGTTTATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACGTAGAAC
GCTTTTCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGCTGTTTT
GTTCGACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAATTTTGG
TCATGCAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATCGAGATT
TGAACTATATAGACACATTTTTGAACAACTCGGTGTTTAAAACATCAAGA
TTTAAGAGAACTctcatattcatgatattcatgacgtaatgttttctacg
gaaatacctcggttttagccagtagtggcaaatttaaattagacaaaatt
tgtataaaatttgccactacaaACCgggaaaacattacgtcatgaatatc
atgaataaaagaaaacttcAGTATTTATTGATTATTGTATCAAAGCAATC
AAAGTGATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTTGTACAT
TCCCACTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTTATTCGA
GCTactacgaaaaaaaaaacagcaaaactttctctaagagtcattttatt
ttttgagattCAATGTCAATTTGATCAAATTCGCCATACTAATACAACCG
GCCAACAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATACTTCAAA
GTGTTGGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCATCAGCCG
TTTGAGGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATAACAACT
CCCAATGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCAGAGTCT
TTGTCGACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTGACATCA
AGTTTATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATAAGCCAT
TCAGGTATCACGATTTCTTTTTCCGACATTACACCACCAAAAAGTTCAGC
CGTTTTAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATATCGCAAT
ATTTCCATATTCCAACATAAAGCCTTTGTTTAACACCATTATTCAAAGTC
TGCATGTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGTTACATG
CGACCAATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAGTACATG
AAGTCCATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGACATTTGT
TTAAAAGACATTTTCCACTTAAACCTTCTATAGATCGATTGAATACGGCG
TAAAAAGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAATTTGAG
GTTTTTCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCACATCTT
TATTGCCTCTCTCTATATAAAATATATATGGAAAATTAAACTTCAACCAT
ATACTTATAGATATGTtgttttacaaaaaagtaaagtatagatATCAATT
ATTATAGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTTTTATTA
CTCCAAACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGACAGCTC
TCTCTGACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATATcgatg
taaaagatttcttatattgaatatttctctTGATGCGATGTGACGACGAA
GGAGAAAATTCTAGCATAAAATGATAAGCTCCGgttatcaatattttaaa
tcATATTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAACAAAGGA
TACATTTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCATTTTGTG
TCAAGTCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGTAGACTA
TAACACAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGCATCACC
AACCAATCTTTGACGATTTTTAACAGGCCCGGTGGGaacggggagactgg
ggagacttcaacCAAGGctattgagatttttttctcaaattcctagcgaa
ttttatctcattttgagctttCAGCCTCCCCCTCtttaacggttgttccg
ccgggttTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATTATAGCA
AGTAAGAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCATAACAA
CAACCAGGCTCAATAACACCAGATAATAAGAATAATCTAAGAACAAATTT
GAGTATGGGATAGTCA
Run BLAST on NCBI

transcript from alignment at scaffold_279:34744..50715-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056654 ID=TCONS_00056654|Name=TCONS_00056654|organism=Clytia hemisphaerica|type=transcript|length=15972bp|location=Sequence derived from alignment at scaffold_279:34744..50715- (Clytia hemisphaerica)
CTACCACTCACTCGGTCGTTTCAAAGCGTTCTTGCAGTAAGTTGGATTTT TTTATATATAATTTGTATCTTTCTGAAATACTTATTATTAGATGATCCGA AGTCAAAATTGTATCATTTTGCTCTTGACTATTATTTATTGAGGGTAATG TAACGACTTCAAAGTGAGAAGTATTACACAATTTTTTGATGAGGCTCGGC TGTACTCTTTTCTTCTGGCACTTTTGTGTCTTTGTCTGCGAAATTGTTCT TATGTTGTTCTCTTTTCTAGGGCAAAACTGAGTTTTTAGGTTTATTACCC CATCTTTACAAAAATAATACTTTAGAGGCTCTTCGAATTCAGCCATTCCA AATCAAGCATTGTTCTTAAAGTGTTCTCATTTTTGGCCTTTTTGAGCATC ATTGTTCTTATGAAAATGAGAGTGTACTGGTCGACTTCACTTCCTCTTTC CTCTAAAACTTTGTTTTCCCTCCTCCTATTTTGCTGAAGATACCACCACA GCGATCCTTCAAATATAGGAAGTCAATTTGAAAAACAAGGTACGCTACTG TACATAGGAAGTTATAAAGCATTGATTTTATATTTGACTGTTTTGAGATT AAGGTCACGTTATTTTTATTCAACCCATGCTGAAAAGTTCAACTACAGCA AACTATCCAGTTGTATGTTTTTTAGTCGATCCAAACGATAACAATTAATT TCCTAAGGTCAGCTCAAAGTTGTGTGGCTTTTCTAAGATAGTATAAAAAA TCCTTCTTGCTTATTTCAAATCTTTGTAACATTATAAGCGATCTAACCGC GTCACTTTTTAAAATGATATTCATCTAACAGTAAGATTAACAATTTAAAT GTCACTTTATGTTACAGATCTACACCATTTACATTATTCCATCGAGAAGT TGAAGACTATTAATATTATCATCGCACAACAGGCATGGTGAGGTTATTTT CAATCTACCATGTCTCGTTCAACTGGAAAAGCGTTTTATAAACATACTTG ATTTTTGAGAGAGATGTGTGTCTGCTATACATGTTATGACAGTGTATAGG TTCAATCAATACATTGTCAATCGGGTGACGGACAGGGATCTGGTTTTATT TTGAACGTATTTTAAAATTGGTTAGAAATTATGTAAATGTATGTTAGAGA CTTCGATTTGAACGATTTTGAAGGCTTTCCTGTGTGTGCGATCAACGTTG AGGATATTGATTGAATTTTAAGAAACACACCAAAATGGCTAGCCAATTTG AGGTAATGTCAAATTTTTATTGGAGTTTCATTTTAGAATAAAGTATTATC GTTACTCTACACCTCGAGTGTTTTATTAACAAATATTTTATCTTTCTCAA TTACCAAAGTTGATTATATATTTTATACTATACTGGGCGAAATAAGAGAT TTCCAATCCTGGAAATATCTTGAAAATATGATAATTCCATATACTTTTGT AAATATGGAAATATGACTGTTCTATATTTCCAAAGTTGTAGAAATACCAT ATTTCATGATATTTCCAAATCTGAAAAATCATATTTTCAAAATATTTCCA ACTTTTGCAAATATGATATTTCCAAAATTGGAAATATCTTGAAAGTACCT CATTGGAACTAATTTTTGCGGGAATTAATTTTTGAGTTTTTCGCGGTTTT TCGTCAAAATCGCGAAAATTTTAACCTGCGAAAGATTTTGAGAGTTAAAA ACCGCGAAAATTAAAACCCGCGAAAATTTCAGAATGAAAGAAACTGCGAA AATTAAAACCCACGAAAAGCAATTTTTCGGATATTTTTTTTCGACCGCGA AAATTAGTTCCAATAAGGTATGTTTGAATGAATTTCAGAATTGGAAATAT CATGAAATATGATATTTCCACAACTTTGGAAATATAAAAAAGTCATATTT CCATACTTACAAAAGTATATGAAAATATCATATTTTCAAGATATTTCCAG GATTGGAATTCTCTTATTTCGCCCAGTGATATAGATGGGAACCCGTCGAA ATTTTTATTGATTTTCCACTCATGTGAGCTTAGTGAAATGGGAAAATTAA AGTCTATTTCAAATTAGCTGGCAGTGGTTTTAGCTTTTCACTCTTTGCTG GGTTAATTTTTTTTCCATTTACAGATTAAAACACTCTCTAGTTTAACACT TATAACAGGGGTTTTTCTAAGCACTTTTTTATGTCCGTATACCAGCCAAA ATACTCAATCTAAGATTGGGTTTTGGAAAATCAATCCAAAATATAAAATA TATTTTCTAGCAAAATTAAACTTGTTTGTTGTTTACAAACAAAAATCTCT AATATTACATATTCAAAATATTTTTGGGAGCTTCGCCCTTTGAACACCAT AACCAAACCCCCAGCTTCATCAATATACAGCTTTACTGAGAAAATTCCCT TACAAAGAATGGCCCCAGCTCAAAGTGCTTAGAAAAAATCCCTGTTATTA TGATTACCAATATCTTTTGATGATCTATATACCATATCTTGATATCGAAA ACCTCTAAAAGCAGAGTCTCCTTTACAAGATCAGGAGATTTTTTCTGCTG CGTTCTGCTGCAAACATCTTTAAGAACTTATTGATAGACAGAGTAGGCTT GTTTATTATTGGTGAAATTGTTTTGTTTTTTTTCCATTTCTTACTTAGTT AGACTTGGTCATTTCGAAAGGGAACCCAATGAAAAAGAATGCAAATAAAT TGTGCTTTCGCCATGGACTTTGACAACTGTTTATAAGAATCGTGAACCTT ATATGTTTCTTATATCTAACACACTGGACTTTGGAACGCCCCTTTTTATT GGATAAAGATATTTTTCTGACAATTTGAATTCTCGACAAGAAATACTTTT GAGGTAATGTTCCTTGGTGCCACGTTGTTCTAGAGTTGATGTGTAATTTA CCTGGGAAACGTGATTCGTGTTGTTTTTTCTTTCTCTTTTGGAACTTTTT CCGCCGTTTTGTTTTTAAATTTGAGCGTAAAATCTCCCTGCGAATGAATC GACTGGCGATACAGTTGCAAAAACACTAAATTATGCCACTTCCGTTATGA AAGTCCTTGTTTTTTGTTTATTTGGTGAGATTCTGGGATGACCGAAAACT CCAAATCTTTAAATTTTTACTCTGATTTAGATCACAATCCAAAAAAACTT AAAAATACCGGAAAATACATAAATTACCTTCGTGTTAATTAAGTAGTGAT CATGTTTTTGCAACAGCACGATCGATGTATAGGCCTTTTCATAAATTATT TTGAGTGCAACAAGTGCCTCGTTTTAAAGCCATCACCAAGGTGATTAAAT CGGTCGAGTCTCCGGTGTTACTTTTAAAAGTAGAAATTTTTATCATGAAC TCCCCCCTAGTAATCAATTACAATAGCAATATTTTGAAAACGAAGAAAGC GCGTTGGTCCCGATGTGATTTTATGAAAAGATCTATTGGTATCGAAGTTG TGCATTTATATATACGGGGTTTGCAAAAGAAACATGGCCAGACAAAAATT GTGTTACTTGTAGAGCAGTTATTGCCTGAAAATTATATTTCTCTTTTTTT CATAACCTTGTTTGTTAGTTGGTACGGAACACATCACCATTCCTTCATCT TATTCTTTGTTCTACTCTTTCCCATCCATAGGAAGACCACATTATGAACG AAGAACAAATCGGTGAATATCGAGAAGCTTTTGAACTTTTTGATAAGAAT AACGATGGAAATATCAGCATCAAAGAATTAGAAAAAGTTATGAATAGTCT GGGACAGAACCCATCAGAAGCTGAGGTATGATTTTCCCAGATTTCCCAGC CTTCCTCGTATCCTCGAACGAAAAGAGGTATATGAATTAAACATAGGCGA AGCGAGAAACCTTGGAAAATTTCAGAGGGAGTGCAGACTTTTATGATATA TTCATTATATTTTGATAAAACAAAGACAATAATTACAGTGTCGTTAAAAC CGCTCTCATCCATAAATTTTACAGGATCTCGCTACGCCTATGATTGTAAA CTAAACTATGCATTAGTTTGATCTTTAATAAATCAAAGAATTCTAGACAG GTCAAAATAGCACCGAAAAGAACAATATAAAGCAGAATTAATGTACTGAA AAACTAAAGAGTCACTTTAAAAGTGTGATAAATGATTATTGCCACACTTA CGAGGAATTACATGTGCATGCATTTCTTCTTGGGCTTGTGCTATCTTGAG CCTCTCTTCTATGCCTCTTGAGATCGAATCAAACCTCTTAGTCTCTCAGA TCGCTTTTTTATGGTTCTGATAGTGCTCACCAAAATTGTACCATCGTCCT TCAGTAAAATCAAAAAGTGGTGAAAGTAAGATCAAACAAGAAAATTTCGA GTGTATTTTTGATAGCTATTCCTTTTTTTACCAGCTCCAAGATATGATCA ACGAAGTAGATTCGGACGGTAATGGAACGATTGATTTCCCAGAATTTTTA AGCATGATGGCGCGCAAGATACGGGATACTGACACCGAAGAAGAAATCAA AGAGGTAACTCTCATTGACTTTTACATAAAAAAGGAAATCATTTTTGCTG AAGAAATTTTTCTTCAAAATAAATGAACCAGTTTTCATTTACAAATCCCT ATTTGCCTTCAAAGAGACGAACAGGTTTACTTTCAAAAATACATGAGCAG ATTTACTTTCACAAATGCGTGAGAGGATTTTCCTTCACAAATACATCGAC AAATTTTCCTTCAGAGACACAAAACTACTTATCCTGCGAAGACAATGAAA GACTTCTTGAATCCTTAAAAAAGTTAATTTAATGCAGTTGATCAAAGCAA GCACAAAAGTCAGAGGTTTTCCTTGCAAATGAAAAATTTACTTTGGCGAA TTCTAGATTCTATAAAAGTGAATTCTTAGCAAGTCTAGTGTATTGATTAG GGCGAATATGTATTTGATGCGGCGAACCGAACTTTTAGACCTGTGAAAAG TAATTTTTTTCGTGTCTAGGACCAGCAAACTTCGCTGTTCACCAGACTTA AAAGACGCCTGCATATTCTTTCATTTTTCCAGGCGTTTCGAGTGTTCGAC AGGGATGGTAATGGTTACATCAGTGCATTGGAATTACGACATGTGATGAC AAACCTTGGTGAAAAGTTAACTGAAGATGAAGTGGATGAGATGATTGCAG AAGCGGATCAAGATGGAGATGGACAAGTTAATTATGAAGGTCTGTTCCTC CTTTTGTTTCTTTCTTTTATTTCCTAGACTAGAGGATATTTCTAATTATT TTAATAGAAAGAGACATCTGAGCTAACTGATGCTTAGGTCCCTCTAAGTA TCAAAAGTTTAATAAATCACCCATTACCATCTAAAGTCTATTCACGATAA GTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAAT CTTTATAAATTTGGTATCGTTGGAGAGATATTTGTGAGTGGAACAATTTG AAATAAAAAGATCTTCAAAAGAATTCTAAAAATGAAGATGAAAATGAAGA AGAAAAAAATGAAGATCTTGTAGAAAAGTGCTATAACTTTCATTTTCACT GGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCAATACAAAGTTATGATACAAAGTTGATAAGTGATTGACCCC AAAAAACAGCAGAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATTAGC TTATAACTTTCTTTGATATCTTTTGACTGAATGATTATTTCTGAGAAATT TTTTCACAGTGATGACGTTCGATGATTAAGGATTTACTTCAGTAAAAATG ATAGTTGTAGCACTTTTCTATAAGATCTTCATTTTTTTCTTTTTCATTTT CATCTTCATTTTTAGAATTTGNNATCTTTCCAATGATACCAAATTTATAA AGATTGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCAC ACTTATCGTGAATAGACTTTAAAAACTTGATTTCATCGTGAACATTGTTG AAATCAAAGGTTTAACTTTGAAAATTGTGAACGATTATCCTGATGATAGT GGATCACATTATTTCTCACCAGATTGCTTGTAAAAATTTTCAAATTTGAT AAAGTACTTGTTTCATATTGCAGTAGTTTTGAGATGACTAAAATTTGGGA TATTTTGGCTCATTGACTTAAAAAACATCTAAAGTTTGTTCCAAAAGATT GACATTGCACTGCATTTGAAATAAAGAATTCAAAAATTTCGAAAATGAAG ATGAAGAAAATGATGATGAAGAAAATGAAGATTCTTTCTACTTGCTCACA AATTTTGAATTCATACTTTTCTGAAACTTTGAACTTGATTGCTGATTTCA AATATGTTTTCAGATACTTTATAGGTATCTTTATTAGATAAAAAATTACA GCCCTCCGAAGTGGTTCCATTTTTAGCCATTTTAAGCCTATTTCGAAGGG CTTTTAATACCTTAAGGGAACTCATTTTGGCGGAATTAGTTCCCGCCAAA TTATTATTATTCTACATCCAAATACGCTTCCAAAAATGTATAGTTTGTTA TGGTTTAGGGGCTGGAACTGGGGCGGAAAAATTAATGCAATTCTGGGACA TGCATTAAGTTACCCGAGCCAGGGTTCAGGTACCCCCCACCATTTTGTTA CCCCCAAAATTTTCAGAATTCTAAAGTAGCCCCCTACTTTGAGTTTTTTA TTAAAAATGCAATAAAGAATTTTCTGCTCTTTTGTCACTCCTAGGAAAAT ACTTCAATGGTGAGCATCCCTTCGTTTTTTAACAAATTCAAGGGTTTCTA GAGTTTTTAGTTGATCTTTGCTAGTTTTAAAGGATTTCAAGAAGAAGTCT GTCGACAATAAGAGAAAGGTTGAATTTTCAAATCTCAAGGTTGAATCCTC AACTCCCTTAAAATGCATAAAAAACCCCTAAGACGTTTTCTTTAACAAAA TCAATTTAGGAATACTTCCAGGTCTGGCTTTTTAAACACTTTTTTTTTGA GGTACCCGCATTTACAAGTACTCTTAGGTGCCAAATAAACGGGGGGGTTG GAATAAACGGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGG ACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAAT AAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGACT TCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGGCC TAATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGG GGACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAA ATAAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGA CTTCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGG CCTAATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGG GGGGACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCA AAATAAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGG GACTTCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGG GTCCTAATAAGGTCCGGGGGGGTTGGAAAATTTTTTCGAAAAATTAACAA GCGGGGGGACCGTTTATTTGGCACCTAAGAGTACTTCTCTTGGGATTGGC TTAAAATTTAAACGATTTTTAAAGATTCAAAAAGTAAACAAACAGACTAA TTTCTTAACGTAAGTTTAAGTAAGAAACAATGGAAAGAAACAAAAGGCTT CCAAGGCCAGGGTTTCTTATAGGGGCTATGGTATATCTTATTACACAAAA TCAACTAGACATGGTTTGCACTAAAATGCTACCGTTATAATAGCATTTTA TAAGTTAACATGCTTAATATTGTACATAATTCCTTGTTTGTTCTGTCTGT AAAAACTGCACTTTTTTCCCATAAGAAAAATTTTATAAGAACAACGAGGC TCAAAATCGCCAAAAATAGGAACAATTTAAGCATAATGCTGAGCCTGAAA TTTAGAGGTTAAAGTAGTAAAAATTGGGTAGAACGCCTTAAATACCTCGA TTACACCTTGTAAAAAAGTACAGGATAAAGCGATAAAGTGATAACCCAAA GTTATATGACCGTCTATCAAGAGTTATAAATTTGATTCTTATAAAGTAGA TGCCTGTAAGAAATATACAAATATGCTCATATTACGCGTCCTCCCTTCTT CACTTTGTAAAAACAAAACCACTTTCATTTTCATGAAGAGAAATTCTGTC TATTTTAAAGGAATCCCTTTATAAAGTTGAAAGACTCACTTTGCTCAATC CTTGAAGTACAGATTCCGGTTTTGGCTCATCTCCAGCCATTTTCCAGACA GAGCACGTTTGATCATCGTTGTTGCGTAATACGGTCAATCGCTGAAAGAA TTTTAGGTATTTTAGTTTTTTATTTCGATTTGGTTATATCGCTAGCAGAT GATTTTTTATGAAAGATAGAAAAACAAATTTCTTAACAAAAAATGGAGCA GTATATAGGAGAAGAGGTATCCGCCAATTAAAATAATTTCTGTCCCAAAG AAAATGGGAAGATTGTTTATTTTAATGTGTTATTCTTGAAGAAAAGAGTA ATGTGTCGTTGGAAGATGATTTTAAGTGAATTCAAGGCTAAATTGAAAAA TTTTCGAAGAAAAGAATCATTGAATGATATGATTTTTAGAAAAATTCTTC ATTATCTACACATTTCTTCTTTATTTCTAGCTTTCTTAAAAATCAAAATT ATTCTCCTTGAGAATATCAACGGTATACACGTTGTTTTTTTTATAAGGAA CACGTTTATAAGGAACTCGAGGCTGAAAATGGTTCAAAAAATAAGGAATT GTTAAGGAACTGCTCAGGCTGAGAATAAGTGGATTTGAAAATAATGTACC TTATTGGGACTAACTTGACCAAATTTTGATCTTTCAAGGGGCAAAAAGTT CAAAATTTCCTATGTAGTAAGGAACTCGATAAGGAACTTTGAGACTGAAA TTCTCTGTAAAAATAAGGAACTCCAGGCTCAGAGCAAAGTTAAGGTTCCT TATAAAAAAAAAACGTGTATAACTTTTCAATAAAGAATAAATGGTTACTG ATAAATTGTTAAAAGCTTTGTGTCCTCGTGCTTTTGAGATTAGGATTCGT TAGGATCGAAAATTAAGTAAATGTACCCAGCATCTTTAAAAAGAACTTAC ATTTTTGAAGTCCTCCATGTAAGTGACATGAGGCCGGCCTTCATGGTGAG GAACGTCGTAGATCACAATGTTGTTCTTTTTATCCACAGAGATCTTTTCT TGGTAATTGTGACCATTCTCGGTAAACGCCAAATTGTGTGTTTGACACTG TTAAAAGATATCAAAAAATAGACCTTTGTATAAATTACGTCACGAGCAAC GCTGACCTCGTTTTCAAGATATTGCTATGGTAATTGATTCCCAAATAACT TCATAAGAAGATAACTCTATTTCTAAAAGTAACACTTGAATATTCAAGGG ATTTAATCGCCTTGTTAATGGCTTCAAAACGAGGTAGTGTACAGTTGCGA TCAATAATAATTTATGAAAAGGCCTATTGACATATCAATCCGATGTTTGC GAACACGGTGACTTGGAGTGAGCTAAAAATTATGAGACCACTACGTTTAG CTATTTTAAAGATTCTTTTCTGTCTTTAGCTTTAATTTCAGAAAACATTC TTGTTTAGCTAATCAATAGTAAACGCGATATGCCAATCCGGGTTGTATTT TTCTATCTAAGCAGCTTTAAGTCGCACACAGAATAAAGGAAAACATACCT TGATAGCGACCAGACTTGCTAGCGCCAACACGACAAAGTTCAACAAAATC TAAGAAGAAAACAAGATACGATATACTCGCAAAGGACTAAAAATATTCCC GAAAAGGGCTGGTTAGCATACAATACCCATAAAGAGGCCCATCTTATTCT GGTTAAAATATAGAGATAGTTGTTGAGTAGTTTAAGTCACGCCAACTTAA TAATTCCAAAGTTTAGAAAAAACAATGTATTTTATATTCGACTTTATCTC TAGAGTGCTTTACTTACATTCATCTTGAGTTTTCTTCAATGTTTCTTCTT TTTGAAATTTCTTCCAAAACTTGTTGATGGTGGTAAGAGAAGAAACTGGG TGTTTTATAGGGATCTGTAAGCACCGGATTGGCAACTAATCTAGAAAAAT ATATTCCCATTCGTCAACTATACTGGAAAATGACTAGTCATTTTTCAAAA AAACACTTCAAAGTATTGTTTAAACATCTGAACAAATTATTTTTTTCTCT GAAATGGATAGTGGGTTGAATATTTTTCTGGAAACTTACTCGAGTGAGTT ACAATCCCGTTGGGAGGGGGTACTCCAGTTGGCAGATGACGGGTACGTGC AGACGGAACCTTCCAAAACCTACCCTTAGAGAGACTAATTTTTTGCGAAA AACTGACCCTTAGAGTAACATTTTTAAAACAATTTCTTCGATTTTCAAAT AGTTTTCTACTCTTAAAGAGATTATTTTGCAATTTCTTCTCTTGAAACTA AAATATTTCTCTAAATATATAAAATCACAAAAATTACAAGTACTGTGATC TTGAAGTTTTTACCAGTGATAGTTTGTTCACGAAGGCTGATACGTCTAAA AAAGAGTCAGTCTACTGTCTCATAAGTATGTTATTTTATCATAACTTTTG GTCTGACCAGACTTTGAGCTTGCATCGTCATTAAGGAAAGGTTGCTTTAC TATCTTGTATATTTTTTTCCAATCTAATTTGGGTTTCATCAAAAGTTACA GCCATCCAATCTTCGCTGCAGATTATGCTGAGACAGATCCAAGGCGATGC TATCGTCCGTTAGAGGGTCAGCAAACGAAATTTTTCAATTCTGGAATACA GTAAAATAGGGGTGGTTTGGGCGCGAAAAGGGCAATTTGGGTCTGTAAAA TTCACGATATTCTTCAAAAGCTTATCATGAAATTGCGTCACAAAAAAGCT CGTGGAGATTTTTACACCCCCTTCTCACAGACCCGGTAGGATTTTTTTCA GCCAGTGGGGTTAAAAATAACGGACCAAAACTTTTAAGGCTGGGGTTTTG AGTTCCATTGTTTTCAAGCCATAAAATTCAGTAGTTGGAGTGAGGATTCA CTTACCTTATCACGGAAAAAAGAGTTTTATTTAGTCGGGGTTTTTTTCCT TCGGGGAAAGATTTCGTCACTTTCCCCCGATCAAAATTTCAAATTCGTCA CTTTTCCCTGACGAAATTTACAATTTAGTTACTTCAAGTTACTTTAGTTA CCCAACTAAATTCCTTCACTAGCTCGAAAAAAGGTCTTTTAATTCGACGT TTAAAGCACTAATTTCGGTTAATAAACGTGTAAAAAATTTAGATTTTAAT TTAGCTTGGGGTTTAAAAAATCGGATAAACGTTTTGGTCAGGGATAAAAA AATCGGGTAAAAGTTTTGGTCGGGTGATTAAATATCGGGGAAAAATTCGT CGGGGGAAAATTTCGTCACGTCCTCAAAATTTTCATCACTTTCCCCCGAC ATTGTTTTCCCCGATAAGGTATCTGATTGTTTTCAGCTGGGACAAAAATT GGAGTATACTTTTCCACTGAAGACGATAATTTGGCCAATTTTTCCAGTCA AAAGGGTTCCCATTGGGTCTGTGAGAAGAAGTGTATCTTTTTCGGCGCTG CATTTTCAGTTATCGCTTACTTAAGGTCAATATGCTTGGGGATTCAAGTA ATTGCTTTAAAGTTTTTACCTCGGGAAACAAAAGGTGTAACCAGGATTAA TTTTTACGATTTGGCCAATTTTTCACCCTGATATTCTTATAGAAGATATT CTTATACAAAAAAACGTGTATATCGATATGCTCAATTGAAAATGAACCCA ATTTCGTACCCAGAGCTACTTGTACCACTTTTTGATTTTACTGATGAACG TGATTTAACACCCCTGTCTCACACCCCCGGTGGAACTTTTTCACTCAATG GGGGATAAAAACTCCTGTTGAAATCTCAATGGGGATAGAAATTCTATTGT TTCAAGGTTAAAAATCCAGTGAGGATGGGTTTGGAGTGTAATTTTCAAAC ATTGAATTTCGAATGGGGATGAAATCAAAGTCAATTTCCAAGTGGGGCTG ATATTTTAGGGTATTTTCCCACCAAAGAGACGAAATTTTTGTCAAATTTT TCAGTGGGGCTGAGGTCCCAACGGATTTGTGACAGGAACGTGATAGAATT CATTAGCGCTATCAGAATCATAAAAAGCGAACTATAAGAATGGGTTCGAG TTTGGAATGAAGTTAGTTAAATAAAAAAGAATAAGTGCAAGAAGCTGAGA AAACATATTTGTTTTACGTAGGTTAGAGGACCTCTTGAAATCTCTTTAAG ATTTTCAGCAAATAAAGATCTTAATGGCCGTATTTTTATGCAACGTATCA GATTTTACCAAAGTCAAAATGGCCGAAATTGCGTCGAGCACTATGATGCA AATTGTATATTTTATGATTTTTTTCTTTCAAAAAAAGTGTTCTAAATATT GGATAGAGAAACATTTTTGTGAGATTAAATCAACCTTTTGGTCGTTTGCT TGACAGATTTTCACTATTCAAATCTCTCGAAAAATCTTTGGCGGGCGCAT GCCCATTTCTCGAGACAGTCAATGTCAACGACATCAAAATGTGGCTATAA TGTAATAATGTATTTACCACTTTTTATCTACAGAGTTCACCAGACTGATG TTATCAACCCCAAGATGACGAAAATGCTCATGAGGTCAACACATGGAAAT ACATCAACAGACAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTA TATTTCTAGTGTTGTTTAATGTAAAATTCAAGAATATTGTACACATTATT ATAGTGTATTTTTTCTCTTTTTTAGTAAAAGTTTCGGCGGGAAAAATTGT AAATGTATTTATAAGAAGATATTAAAAGAAAAATATTTAAAATATTTACA AACTTACAAATAGTATAAAACTCCCTCACATTATTAAAAGATTTTCATCA TTTGATCAAAATTTCACACCCCTGTCTCGCAGCCCCGGTGGAGCTTCTTC TCACGGCGAAATTCCAATAAAGATAGAAATTCTATTTTTCCCTGACACAG GGGTGTAATTTTGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGG CCTCAGTGTCGACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGG TAGTGCGAGAGATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCT TTCTAATATAAGTGTTCCAAAATGACGAAAATCGATTACATTACTTCGAA TAAACGGTAACTTTTTTAGATTGTCCCGTCGAATAAACGCCCCTCATTAA AGGAAAAGTTTTTTATATGATGGCTCCCAAAATAAACGCCTCCTCTCTAG AAGGGACGTTTATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACG TAGAACGCTTTTCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGC TGTTTTGTTCGACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAA TTTTGGTCATGCAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATC GAGATTTGAACTATATAGACACATTTTTGAACAACTCGGTGTTTAAAACA TCAAGATTTAAGAGAACTCTCATATTCATGATATTCATGACGTAATGTTT TCTACGGAAATACCTCGGTTTTAGCCAGTAGTGGCAAATTTAAATTAGAC AAAATTTGTATAAAATTTGCCACTACAAACCGGGAAAACATTACGTCATG AATATCATGAATAAAAGAAAACTTCAGTATTTATTGATTATTGTATCAAA GCAATCAAAGTGATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTT GTACATTCCCACTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTT ATTCGAGCTACTACGAAAAAAAAAACAGCAAAACTTTCTCTAAGAGTCAT TTTATTTTTTGAGATTCAATGTCAATTTGATCAAATTCGCCATACTAATA CAACCGGCCAACAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATAC TTCAAAGTGTTGGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCAT CAGCCGTTTGAGGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATA ACAACTCCCAATGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCA GAGTCTTTGTCGACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTG ACATCAAGTTTATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATA AGCCATTCAGGTATCACGATTTCTTTTTCCGACATTACACCACCAAAAAG TTCAGCCGTTTTAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATAT CGCAATATTTCCATATTCCAACATAAAGCCTTTGTTTAACACCATTATTC AAAGTCTGCATGTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGT TACATGCGACCAATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAG TACATGAAGTCCATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGAC ATTTGTTTAAAAGACATTTTCCACTTAAACCTTCTATAGATCGATTGAAT ACGGCGTAAAAAGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAA TTTGAGGTTTTTCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCA CATCTTTATTGCCTCTCTCTATATAAAATATATATGGAAAATTAAACTTC AACCATATACTTATAGATATGTTGTTTTACAAAAAAGTAAAGTATAGATA TCAATTATTATAGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTT TTATTACTCCAAACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGA CAGCTCTCTCTGACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATA TCGATGTAAAAGATTTCTTATATTGAATATTTCTCTTGATGCGATGTGAC GACGAAGGAGAAAATTCTAGCATAAAATGATAAGCTCCGGTTATCAATAT TTTAAATCATATTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAAC AAAGGATACATTTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCAT TTTGTGTCAAGTCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGT AGACTATAACACAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGC ATCACCAACCAATCTTTGACGATTTTTAACAGGCCCGGTGGGAACGGGGA GACTGGGGAGACTTCAACCAAGGCTATTGAGATTTTTTTCTCAAATTCCT AGCGAATTTTATCTCATTTTGAGCTTTCAGCCTCCCCCTCTTTAACGGTT GTTCCGCCGGGTTTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATT ATAGCAAGTAAGAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCA TAACAACAACCAGGCTCAATAACACCAGATAATAAGAATAATCTAAGAAC AAATTTGAGTATGGGATAGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035681XLOC_035681Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056654-exon-scaffold_279-1575043694:50680..50715TCONS_00056654-exon-scaffold_279-1575043694:50680..50715Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1575043694:50177..50226TCONS_00056654-exon-scaffold_279-1575043694:50177..50226Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1575043694:49779..49848TCONS_00056654-exon-scaffold_279-1575043694:49779..49848Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1575043694:46941..47084TCONS_00056654-exon-scaffold_279-1575043694:46941..47084Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1575043694:46212..46331TCONS_00056654-exon-scaffold_279-1575043694:46212..46331Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1575043694:45527..45683TCONS_00056654-exon-scaffold_279-1575043694:45527..45683Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1575043694:34744..37732TCONS_00056654-exon-scaffold_279-1575043694:34744..37732Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:50680..50715TCONS_00056654-exon-scaffold_279-1510915933:50680..50715Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:50177..50226TCONS_00056654-exon-scaffold_279-1510915933:50177..50226Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:49779..49848TCONS_00056654-exon-scaffold_279-1510915933:49779..49848Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:46941..47084TCONS_00056654-exon-scaffold_279-1510915933:46941..47084Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:46212..46331TCONS_00056654-exon-scaffold_279-1510915933:46212..46331Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:45527..45683TCONS_00056654-exon-scaffold_279-1510915933:45527..45683Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1510915933:34744..37732TCONS_00056654-exon-scaffold_279-1510915933:34744..37732Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:50680..50715TCONS_00056654-exon-scaffold_279-1491911889:50680..50715Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:50177..50226TCONS_00056654-exon-scaffold_279-1491911889:50177..50226Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:49779..49848TCONS_00056654-exon-scaffold_279-1491911889:49779..49848Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:46941..47084TCONS_00056654-exon-scaffold_279-1491911889:46941..47084Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:46212..46331TCONS_00056654-exon-scaffold_279-1491911889:46212..46331Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:45527..45683TCONS_00056654-exon-scaffold_279-1491911889:45527..45683Clytia hemisphaericaexon
TCONS_00056654-exon-scaffold_279-1491911889:34744..37732TCONS_00056654-exon-scaffold_279-1491911889:34744..37732Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_279supercontigscaffold_279:34744..50715 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (8.41077 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0.0681434 0 0 0 0 2.33955 3.86014 0.111799 0 8.41077 6.34695 0.290858 0.417032 0 0 1.97209 2.1411 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
500100015002000250030003500SequenceCALM3
Match NameE-valueIdentityDescription
CALM34.349e-7177.78Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
back to top