TCONS_00057295 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057295
Unique NameTCONS_00057295
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057295 ID=TCONS_00057295|Name=TCONS_00057295|organism=Clytia hemisphaerica|type=transcript|length=171bp
GTAAAAGTCAAACGTCAGACGTTTTGAAGGTTTCACCAAAATATATAGTG
GATTTTCTTTGTTTCGATGTTAAGGGAACGAAGGTTTTTCGTTTGATCTT
TTTCGTAAGACTTGAAAAAATCCAAAGATCTCTCTTCATTGTATTAGTAT
TGGAACAAAAATACAGAAACT
Run BLAST on NCBI

transcript from alignment at scaffold_286:392073..392243

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057295 ID=TCONS_00057295|Name=TCONS_00057295|organism=Clytia hemisphaerica|type=transcript|length=171bp|location=Sequence derived from alignment at scaffold_286:392073..392243 (Clytia hemisphaerica)
AGTTTCTGTATTTTTGTTCCAATACTAATACAATGAAGAGAGATCTTTGG
ATTTTTTCAAGTCTTACGAAAAAGATCAAACGAAAAACCTTCGTTCCCTT
AACATCGAAACAAAGAAAATCCACTATATATTTTGGTGAAACCTTCAAAA
CGTCTGACGTTTGACTTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036100XLOC_036100Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057295-exon-scaffold_286-1491911889:392073..392243TCONS_00057295-exon-scaffold_286-1491911889:392073..392243Clytia hemisphaericaexon
TCONS_00057295-exon-scaffold_286-1510915933:392073..392243TCONS_00057295-exon-scaffold_286-1510915933:392073..392243Clytia hemisphaericaexon
TCONS_00057295-exon-scaffold_286-1575043694:392073..392243TCONS_00057295-exon-scaffold_286-1575043694:392073..392243Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:392073..392243 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057295 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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