TCONS_00057693 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057693
Unique NameTCONS_00057693
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length114

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057693 ID=TCONS_00057693|Name=TCONS_00057693|organism=Clytia hemisphaerica|type=transcript|length=114bp
ATACATTTCTTTTCCACAGACTCGCTTTGAAAGAGACACCGAGAAAATGT
TAAATGAAATCAAATTGAAACGTGGTGAAAAAGGAGATTTGAATCGTCAC
TTCGTACTCTGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_297:128092..128481-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057693 ID=TCONS_00057693|Name=TCONS_00057693|organism=Clytia hemisphaerica|type=transcript|length=390bp|location=Sequence derived from alignment at scaffold_297:128092..128481- (Clytia hemisphaerica)
ATACATTTCTTTTCCACAGACTCGCTTTGAAAGAGACACCGAGAAAATGT
TAAATGAAATCAAATTGAAACGTGGTGAAAAAGGAGATTTGGTAAGAAAC
GATTTATTCAAGGAAAGTTTTTTCTCATATTTTCATAGGTCATATCACGG
TCGAAAGGAATTATGGGTAATCAGGACTACCGTGCTCTGATAACGAATTT
TTGTTAGTTTAAAGTTTTGGAAGTTGTCGCATTTACCAACGGGAAGCCGT
TTTGACTTCGCGATCAGTCCTGATTAACCATGATTCATTAGGACCGTGAA
ATGGCATATTGGATCAGTAAATGCAAGTTATAAACGTAAAAGATATAATG
TTTTACTTTCATCGTAGAATCGTCACTTCGTACTCTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036376XLOC_036376Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057693-exon-scaffold_297-1575043694:128391..128481TCONS_00057693-exon-scaffold_297-1575043694:128391..128481Clytia hemisphaericaexon
TCONS_00057693-exon-scaffold_297-1575043694:128092..128114TCONS_00057693-exon-scaffold_297-1575043694:128092..128114Clytia hemisphaericaexon
TCONS_00057693-exon-scaffold_297-1510915933:128391..128481TCONS_00057693-exon-scaffold_297-1510915933:128391..128481Clytia hemisphaericaexon
TCONS_00057693-exon-scaffold_297-1510915933:128092..128114TCONS_00057693-exon-scaffold_297-1510915933:128092..128114Clytia hemisphaericaexon
TCONS_00057693-exon-scaffold_297-1491911889:128391..128481TCONS_00057693-exon-scaffold_297-1491911889:128391..128481Clytia hemisphaericaexon
TCONS_00057693-exon-scaffold_297-1491911889:128092..128114TCONS_00057693-exon-scaffold_297-1491911889:128092..128114Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_297supercontigscaffold_297:128092..128481 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057693 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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