|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057899 ID=TCONS_00057899|Name=TCONS_00057899|organism=Clytia hemisphaerica|type=transcript|length=201bp
AATATTGTAGAAAAAAGACTACAAAACTCGAGTTTGGGAATCATTTGTGT
GGAGAATGTCCGTTAGTGAACGTCAAATGTCCAAATGAGGGATGCCAATC
AGCACTTGTTCGACAAGAGATTCCCGAACATTTGGCTGAAGAATGTTTGT
ACGaaaaaattgaatgtgaatATTTTGATGTTGGCTGCAACCAAAAAGTA
A Run BLAST on NCBI transcript from alignment at scaffold_301:113467..114356+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057899 ID=TCONS_00057899|Name=TCONS_00057899|organism=Clytia hemisphaerica|type=transcript|length=890bp|location=Sequence derived from alignment at scaffold_301:113467..114356+ (Clytia hemisphaerica)
AATATTGTAGAAAAAAGACTACAAAACTCGAGTTTGGGGTAAGTTTAACT
GTGACCAGTTCTTAACACTTTCCGAGCGcataaaagtttttattttcgct
ACACTTTTCCCTAATAAAAACATAAGCGGGGTAATCAGGTTGCTTCAAAT
GAGGagttaaattttggaaaaacttgCCGTGTATCGGTCTTTGGTTAGCG
AGGATCTGTGTCTCAGTTTCCCCCAGTATTTTGGGACAAGGACAAACCCA
GCATTCTCTTTAAAAACAACCGTACGTTCGGCTCAAAATTAGGCgttttg
aaatcggacccttacattGTAGAGAAAGTTCCTGAATTCGAAATTCCTTT
CTTGATGCATAGAAAATATAGCATGTAACAGTCAAATACACGATAATCCT
ATAAAATAATCTAACGGCATAGCATTTTCtgtatttttcttttagaaTCA
TTTGTGTGGAGAATGTCCGTTAGTGAACGTCAAATGTCCAAATGAGGGAT
GCCAATCAGCACTTGTTCGACAAGAGGNTTCTTTTAGAATCATTTGTGTG
GAGAATGTCCGTTAGTGAACGTCAAATGTCCAAATGAGGGATGCCAATCA
GCACTTGTTCGACAAGAGGTAGAAATTAACTTCCCCTTTTCTTGCTACCG
CAATTTCTTacttggcagaaactttcgcgaaaaagggcaaaaatcgcgac
agtttctgcccgcgaaagtttctgtccTTAACGTATAAGgtaaaataatg
ataataagaacattgttCCCTTGTTTAATTTCTCTTTCTGTTCTTTGATA
CTGTACAGATTCCCGAACATTTGGCTGAAGAATGTTTGTACGaaaaaatt
gaatgtgaatATTTTGATGTTGGCTGCAACCAAAAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057899-exon-scaffold_301-1491911889:113467..113504 | TCONS_00057899-exon-scaffold_301-1491911889:113467..113504 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1510915933:113467..113504 | TCONS_00057899-exon-scaffold_301-1510915933:113467..113504 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1575043694:113467..113504 | TCONS_00057899-exon-scaffold_301-1575043694:113467..113504 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1491911889:114004..114084 | TCONS_00057899-exon-scaffold_301-1491911889:114004..114084 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1510915933:114004..114084 | TCONS_00057899-exon-scaffold_301-1510915933:114004..114084 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1575043694:114004..114084 | TCONS_00057899-exon-scaffold_301-1575043694:114004..114084 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1491911889:114275..114356 | TCONS_00057899-exon-scaffold_301-1491911889:114275..114356 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1510915933:114275..114356 | TCONS_00057899-exon-scaffold_301-1510915933:114275..114356 | Clytia hemisphaerica | exon |
| TCONS_00057899-exon-scaffold_301-1575043694:114275..114356 | TCONS_00057899-exon-scaffold_301-1575043694:114275..114356 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_301 | supercontig | scaffold_301:113467..114356 + |
Blast
The following BLAST results are available for this feature:
|
