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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057984 ID=TCONS_00057984|Name=TCONS_00057984|organism=Clytia hemisphaerica|type=transcript|length=1126bp
GGAAAAGCTTTGTTTCGGATGTCTTGAAAAAGGTCATCTTGCTTCAAGTT
GTAAAAATCGAAGAACTTGTCTGGTTTGTAATAAAAAGCATCCAACTATT
ACTCATGGAATGAGATTTCGTCATCCTCCACGTCTACCTCCTAAAGACTC
GAAGAAAGACAGCTCTGAATCTAAAGAACCTGATGTCAGACCTTGTCCTA
AAAAGCCTGAAGTTTCAAATCCACCTGTTAGTTGTATTTTGAATAAggat
tctgaaaaaaaacattagtaTGTGTGTTGTTCCAGTtatattacgtcatg
aattgTCTAAATCTGACATTGTTACATTTGCTGTGCTTGACAATTGTTCA
NTTATTAAGCTTATACTTCAGTACAGCTTATGCAGAAATTTGGGAGAAAT
TGACTCATTTTTCATAAGGTTATGGCCCGTTGCAGGTGTTAGTCGTTTAC
CATTTCCCTTGTTTTGTGCTTGACCGGTGCCCGCCCGACAACTGTGGTTT
TTGTAAAATGGAGTATAGACACATATTCATTCAGAAAAAACCTTTACTAA
GACTCAATCAAGCATACTTTAATGTAACTTCTGCAGAAACTTTGTAAATA
TTGGTATATTTTTCATAAAGGCATTGCCAAAATGATAAATCACTGGAGTT
GGTCGATTTTCTTGCTTAAGCCGGCTGTCTACTGCGCTGTCACTTTGACT
CTTTACTATAATATAATTAAAAACAATTGTGGGTAAAATTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCGGCTGTCTACTGCGCTGTCACTTTGACTCTT
TACTATAATATAATTAAAAACAATTGTGGGTAAAATTGTGCCAATAATAT
ATCCTATATCGTATATTCTTTATCACACATGAAATTAatctaaaatatat
attttttattattcaatTTCAGTAGGAATTGTTGGAAAGCCGACAACAAT
GAGCTCTTGGCATGTGTGATAACCCGTCTTGAGCGGCTAATTCAGGGAAA
CATCTCTGGGGACCGGTAGCCTACTCTATTGTGCTTTGTAATAAACTCTT
AGAGAATGACATATtaaaattttgac Run BLAST on NCBI transcript from alignment at scaffold_302:323200..324325- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057984 ID=TCONS_00057984|Name=TCONS_00057984|organism=Clytia hemisphaerica|type=transcript|length=1126bp|location=Sequence derived from alignment at scaffold_302:323200..324325- (Clytia hemisphaerica)
GGAAAAGCTTTGTTTCGGATGTCTTGAAAAAGGTCATCTTGCTTCAAGTT
GTAAAAATCGAAGAACTTGTCTGGTTTGTAATAAAAAGCATCCAACTATT
ACTCATGGAATGAGATTTCGTCATCCTCCACGTCTACCTCCTAAAGACTC
GAAGAAAGACAGCTCTGAATCTAAAGAACCTGATGTCAGACCTTGTCCTA
AAAAGCCTGAAGTTTCAAATCCACCTGTTAGTTGTATTTTGAATAAGGAT
TCTGAAAAAAAACATTAGTATGTGTGTTGTTCCAGTTATATTACGTCATG
AATTGTCTAAATCTGACATTGTTACATTTGCTGTGCTTGACAATTGTTCA
NTTATTAAGCTTATACTTCAGTACAGCTTATGCAGAAATTTGGGAGAAAT
TGACTCATTTTTCATAAGGTTATGGCCCGTTGCAGGTGTTAGTCGTTTAC
CATTTCCCTTGTTTTGTGCTTGACCGGTGCCCGCCCGACAACTGTGGTTT
TTGTAAAATGGAGTATAGACACATATTCATTCAGAAAAAACCTTTACTAA
GACTCAATCAAGCATACTTTAATGTAACTTCTGCAGAAACTTTGTAAATA
TTGGTATATTTTTCATAAAGGCATTGCCAAAATGATAAATCACTGGAGTT
GGTCGATTTTCTTGCTTAAGCCGGCTGTCTACTGCGCTGTCACTTTGACT
CTTTACTATAATATAATTAAAAACAATTGTGGGTAAAATTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCGGCTGTCTACTGCGCTGTCACTTTGACTCTT
TACTATAATATAATTAAAAACAATTGTGGGTAAAATTGTGCCAATAATAT
ATCCTATATCGTATATTCTTTATCACACATGAAATTAATCTAAAATATAT
ATTTTTTATTATTCAATTTCAGTAGGAATTGTTGGAAAGCCGACAACAAT
GAGCTCTTGGCATGTGTGATAACCCGTCTTGAGCGGCTAATTCAGGGAAA
CATCTCTGGGGACCGGTAGCCTACTCTATTGTGCTTTGTAATAAACTCTT
AGAGAATGACATATTAAAATTTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057984-exon-scaffold_302-1575043694:323200..324325 | TCONS_00057984-exon-scaffold_302-1575043694:323200..324325 | Clytia hemisphaerica | exon |
| TCONS_00057984-exon-scaffold_302-1510915933:323200..324325 | TCONS_00057984-exon-scaffold_302-1510915933:323200..324325 | Clytia hemisphaerica | exon |
| TCONS_00057984-exon-scaffold_302-1491911889:323200..324325 | TCONS_00057984-exon-scaffold_302-1491911889:323200..324325 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_302 | supercontig | scaffold_302:323200..324325 - |
Blast
The following BLAST results are available for this feature:
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