TCONS_00058067 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058067
Unique NameTCONS_00058067
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058067 ID=TCONS_00058067|Name=TCONS_00058067|organism=Clytia hemisphaerica|type=transcript|length=288bp
ATCATCCCTGCGGCACGAAGATAATGAAAAGGCGAATATTCTCCAAAAAC
AGTTCTGCAGTGTTTTCACTAATGAACCAGAAGGTGAAGTCCCTGCTTTT
TCCAAGCAGGACCGAGGAAATTATTGACGATATCGTCATAACCAAGGAAA
TGCTATCTAAGAAAATTAAGGAGCTTGATACCAATAAATCACTTGGTCCC
GATGAAATCCACCCGAAAATGCTAAAAGAGCTTGTAGACGAGATCGCAGA
ACCTCTTTCCCGTATAATGAACAAGACCTTGACTGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_304:61414..61701

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058067 ID=TCONS_00058067|Name=TCONS_00058067|organism=Clytia hemisphaerica|type=transcript|length=288bp|location=Sequence derived from alignment at scaffold_304:61414..61701 (Clytia hemisphaerica)
CTTCAGTCAAGGTCTTGTTCATTATACGGGAAAGAGGTTCTGCGATCTCG
TCTACAAGCTCTTTTAGCATTTTCGGGTGGATTTCATCGGGACCAAGTGA
TTTATTGGTATCAAGCTCCTTAATTTTCTTAGATAGCATTTCCTTGGTTA
TGACGATATCGTCAATAATTTCCTCGGTCCTGCTTGGAAAAAGCAGGGAC
TTCACCTTCTGGTTCATTAGTGAAAACACTGCAGAACTGTTTTTGGAGAA
TATTCGCCTTTTCATTATCTTCGTGCCGCAGGGATGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036591XLOC_036591Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058067-exon-scaffold_304-1491911889:61414..61701TCONS_00058067-exon-scaffold_304-1491911889:61414..61701Clytia hemisphaericaexon
TCONS_00058067-exon-scaffold_304-1510915933:61414..61701TCONS_00058067-exon-scaffold_304-1510915933:61414..61701Clytia hemisphaericaexon
TCONS_00058067-exon-scaffold_304-1575043694:61414..61701TCONS_00058067-exon-scaffold_304-1575043694:61414..61701Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_304supercontigscaffold_304:61414..61701 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78748	2.61461	6.07162	3.46508	1.20526	2.85723	0.574521	1.61358	1.1297	3.73152	2.26369	2.08329	2.08039	1.23457	0.761241	1.63386	0.335463	0.687678	0	1.98835	0.864117	0.632229	0.512371	0.93164	0.479784	4.28195	1.22549	0	0.49599	0.505335
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058067 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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