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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058301 ID=TCONS_00058301|Name=TCONS_00058301|organism=Clytia hemisphaerica|type=transcript|length=700bpRun BLAST on NCBI transcript from alignment at scaffold_309:672814..692576- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00058301 ID=TCONS_00058301|Name=TCONS_00058301|organism=Clytia hemisphaerica|type=transcript|length=19763bp|location=Sequence derived from alignment at scaffold_309:672814..692576- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00058301 vs. Swiss-Prot (Human)
Match: P2RX2 (P2X purinoceptor 2 OS=Homo sapiens GN=P2RX2 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 7.174e-54 Identity = 86/182 (47.25%), Postives = 122/182 (67.03%), Query Frame = 1
Query: 49 TVLIKNQIHFPKFKVTRNNIVHHQKSGSYMKRCRYNSTTDPLCPIFKLRDIVESCGDDYTQVGFEGAVYGIVMEWDCNLDHSLDECYPEYKFKRLDDVDTPLSHGYNFRYADYYVENGTRYRTLTKAYGIKFELVVHGEAGKFSFIPLMXXXXXXXXXXXXXTFWCDFIVLNLAKKRNVYRN 594
T+LIKN IH+PKF ++ NI ++ Y+KRC ++ +D CPIFKL IVE G+ +T++ +G V G+++ WDC+LD EC P+Y F+RLD P S GYNFR+A YY NGT RTL KAYGI+ +++VHG+AGKFS IP ++NL + +G+ +F CD+I+L K VY +
Sbjct: 196 TILIKNSIHYPKFHFSKGNIA--DRTDGYLKRCTFHEASDLYCPIFKLGFIVEKAGESFTELAHKGGVIGVIINWDCDLDLPASECNPKYSFRRLDPKHVPASSGYNFRFAKYYKINGTTTRTLIKAYGIRIDVIVHGQAGKFSLIPTIINLATALTSVGVGSFLCDWILLTFMNKNKVYSH 375 The following BLAST results are available for this feature:
BLAST of TCONS_00058301 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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