TCONS_00058553 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058553
Unique NameTCONS_00058553
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2418

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058553 ID=TCONS_00058553|Name=TCONS_00058553|organism=Clytia hemisphaerica|type=transcript|length=2418bp
AAATGGTTGGCTTTGACCTTTCAAGGGGATCATGTTACCCATATGTATCA
ATACAGATGTTAGCAATACACTGACCAGATTTCGCTTCATTCCGAGATCG
CAAGTCGTCCTAGAAACTACTCAAAGACAATTTTGACAAACTGACAAGAC
GGTTATTTGCAAGATATAAAAACTGATTTAAAGACACCTTCAAAGAAATT
GGGAATTACTTCGGATTGAATTGCTAGCAAagTAACTGTGCAACAATAAA
CAACCAATCACAGacgtttatcaaagaagaagagCCAATGGGAATCGCAG
GAAAACTCGAAAACAAAAGCGTCCACATTCACCAAGATGGCGGATTGAGT
CATGTGATACATTTCAATGATGGTACAACAACACGGACACCGAAATGTGC
TCGATGTCGAAATCATGGCCTTGACCGAGAATTGAAAGGACATAAAGAGA
AATGTGAATTCAAAGATTGCACATGCCGCTCATGCTTAGTTGTTGTTGAA
CGTCAAAAGATCACGGCCGCCCGTGTGGCTCATCTACGCCAACAACGTAA
AGTGGCCGCCAAACGTGGGGTCGCTATTCCCAACCATAAATACTCACATT
ATAACCCGTTGACGGAGGAAGAAGAGTATATCTTATCTTCACCCTTGCAA
AAGAAAACCACAAGTGGAAAAATATCGCCAACCTATCACCAAGgTCATCA
TGTCACTAACCGGTATTATCACCATAAACCAACATGGACTTCTTACCAAC
CACCAACCCTCGCCAAAAACGGATCTCATCCTCCCTATCCTTCCCCACCA
CGGAGAGGGGAGTACCCACACCACCACCATCATCATCAGCCCAATGTAGA
CAAACCAGGTCCAATCAGATACCACCATTCTCCTGTCTATCACTATCAAC
CCTACCCTGTGGCAAGGTACTTTCCCTACCATCAGCCACACTACCAGCAT
ACTTCATGTCATTCCCCACCTAGGGACTCTATGAGATCATCACCTGCATC
TCTCCCTGGAAGTTACATCGTCCCTTCCCCTCCTTCCATACATGATCGAA
GAGACGTCTTCAGGCCGATTGTAATCGACCCACGGCGTGACGATGCCAGC
GAATCAgaagatgatgacgtcattgatgtAGTCATGGAAACAAGAAATAA
AGATGGTCGTCATGGTAACTCTAAACAAAGAGATGACAAGAAAATAGAAG
CTCTGAGAGTGATGTTTCCAGATTTAGACATGCGCTCGTTACACGATCTC
TATGAGGATTTTGACCAGGATGTCCAGGCGGCTGTTGAATATATGTTATT
CAAAAAGCGTAAAAACGAACAAGAGGAATTCAAACTGAACAATCAGCAGC
AATCATCAATCCTCACCACAACAGATTCTAAGAGAAGTTTAATACATTCT
CCAAAAACAACTACTTCATCTAACAACAAACCATATTATATTGACTCTCT
AATCAGTAAATGTCAACCTAAAGACAACTCTGATACAAATATGAAAAGCA
AAATATCAATTTCTTCGACTGCGTAAAATCATTTACAGTAAAtagataat
tttttataatataaAGAATATTGTATAAAAATTCTTGTTATCCTTGTAAA
TACTTTAAATAATACACCATTAAATTGACGAAATGGGTTCTTCCAGAAAA
Tctttgtacatggggggtggaggatatgtatggtggggtggaggatatat
tggatattttgtccgggggcaatggaaaatctgcaaaatttgccttgttt
tgggGACGAACTTGCTCTGATTAGGGGTAATTTTGATTATCttggggggt
caactgatgcttatccggggggtcaaaattaacaatgtccgggggtaaat
gtgcaaaaaatattatatcctccaccccacataatatatttttttctgaa
agagcccAATACCTGAGGGAACTAGGCTCAGTTCACTTTACCATGTAGGG
TTGATTGAGATTTGTGGCATACATTTATCCTACGGTACAGTTAGAATTGA
GAAGGCTCCTCTGGACTGGACTATTTTCATCAAAGCTTAAATAAATCAAC
CTGCTAATTCGAACTGGAACGAGAAGTCGAATTACAGAACGACTCGAATT
TATGGAAAACATTGTACTAGGGTTTCCCTTAGACCTAAATCAATTCTAGA
AAGATTCAGATTAACTCGAGAGTTCACTACACTTAGCATCGCCCTTTTTG
TGGAAGTTCCCTCATAGCCCTCTCCACATTGTAAAGGTTTTATGGaaaat
ttctctctttaaaatttAACGTAAATATCAAACGTCATACTTGGGAATAG
ACCATGTTATTATATTTCTATGCCTTTCGGGAAATATAATTCGATATTTT
CTGAAACTAATGCAAATAGttatattattttaatgtaaataAGATATATA
ATAAATCATGACAAAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_311:900798..916214-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058553 ID=TCONS_00058553|Name=TCONS_00058553|organism=Clytia hemisphaerica|type=transcript|length=15417bp|location=Sequence derived from alignment at scaffold_311:900798..916214- (Clytia hemisphaerica)
AAATGGTTGGCTTTGACCTTTCAAGGGGATCATGTTACCCATATGTATCA
ATACAGGTAATTTACCAGGATGATATCTACACCCGTGTCTCACTGCCCCA
CTGGAACTTTTTTCCTCAGTGGGAAGTCATTCTCCCAGTGGGCCTGAAAT
TCCAGGGTATTTTCCCACCGGGGACGAAATTTTTGNGTGGGAAGTCATTC
TCCCAGTGGGCCTGAAATTCCAGGGTATTTTCCCACCGGGGACGAAATTT
TTGCCAAATTTTCCAGTGGGGTGGGGCTCCCAGTGGGTCTGTTACACAGG
GATGATATCTTGATTGATTAACTCAGGCTGTTTTTTTATCCATAAGGTAT
TCTTTTTTCTCCAGGATTTAGCTTTAGCTAATTACTTTAAAAAGTATTTC
TGTACTTAAAAAGTACTAAGTGGCACTTTTTACACTGTGCTTGGATAGTG
GTAGTATTCGAGCGTTTGCTTTTTTGAACTATTTCCATCAATGATCTTTT
CTGTTGATTTTGTTGTATGTTTTTTCTTTGGATTGGTTTCGCTAGTTTTG
GGCTCAGATGTTCAACATTTTCTCATCCGGGTCAACTGAGACATTTCTAA
ATCACTTATGATGAACCTTTTTTGTTCCTTTATCTCTTCAATGTGTCAAG
TTTCAAGACCATTGATTGATAACTTTATTATACGTTCTTTTTTCTTAGAA
CGAAGGGCAGCAAAAAGTTCACGAGTCAGAATCGCATATTGGAGCCAATT
TTAAGATTTCCACTGGTAATATTTGTCAGATACATGAACATTGATGTATT
AAGAATTGAAAATTATATTTATCGTCACAGCAGGAATTTACAAAATGATA
CCAGGCTTACATTTTCCTAGGGTTACCAGTAGAAATTGTATCTCACAAAG
CTGATTTCGCATGGTAGAACCTTGAACAGTAGAAATTTGTTATAAAACAG
TGTTTTAACTTTCATATTTAACAGGTCCCTTTGTAGTTTGATATCATGAT
GCCGAAGAATTTGCCAATTGTTTATTGAAACCCTTACACAAAAATGGTAA
GATTTTTTTTAACTTGATGATTCCACGTGAAATTTTAATTATTCAAAATC
TAAAGTTACAAAAAAAACCTAAAGTTATGTTCTCGCCAAGGTGGTTTATC
AATGTAGGGGGTGATAAAATTGATTATTTTTGGTCCAAAATTTGAATTAA
GAAGGATTTAATTCAATAATTTTGTTAAAGTATGGACGCGATGGGAAATG
ATATCTAAAATTTATAAAATAGTTATTTTAAAACTAAAGTTACATTTTCA
ATTAAGAAATCATCTAACTCCTCTGGAATAAAGAACCACAGTTACTATGG
TAACACGATGTACATTTTTCATTGAAAGTACCTGTTTGTCCTGTTTTGAA
AAAAACTCTCAAAGAATTTTGAAACCGATAATTTATGATTCTTTCACGCT
ATCCATAGGGGTTAAAGCAAACTGTTTCTCCAAGGGAATGAATGACTATT
GTCTATTTATTTCTACTATATTTTTGAAAAGTGAAAACTGAATATATTGT
ATAGGGTGGGTTACTAATTTTTCACGATGGGAAAATATGTCAGTCGTTAC
TTTGGTTNTTTTTGATACTCACCAGGCACTATTTGGGAAATTATTATCAA
AGATTGAAAGAAACTTTTGTGAACTATTTTTGAGGAAATTTCAGTACACT
CACCATATAGGCGGTCATCGAAAAATTGTTCTATTCGCGTCACCCGCCCG
CATCAAATTTTCCGCTGATTTTCCGGTTCGGAGATGCGGATNAAATTTTG
TCTGACCCGGTCACTCATTTGTACTAGTTTTTTATCGTGTCATTTCCCCT
CGAAATCCTTCTTGACCAATCAGATTCGTGTAATTGCCCCCGNACAGCGT
AAATATATGATTTTGAGCTGTGCTTTTCACGGTAGCTCTGACGACCATCG
AAAAATTGTTTTGCTCGCGTTACCACCCGCCCCTGAGTTATTGGCGTGAT
TAAAAAAAACCCGGGAATGTTTTCGACCGCCCGTCTGCCCGCATGCATTT
TTAACACCCGTTGCGACGCGAACAGAGAACGCATTTTTTCGATGACCGCC
ATATCATCTAATTTCATGTTTCTTATTTTCCCTTTAAGCTTTTTATGAAT
GAGGATTCGTTTACCTTGACAACGCAATGTTGCCTCGTTTACTGCTACTG
TTACCACGTTACGTCATGACTTTCCATCCTTCTACACGATATTGCTGTTA
CAACTGCAAGATAACTGACATATCTTTTTAATGTAAACAATTTTGTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC
GCATTTACTTTTGACTTTCGGATTAAACAAGATATATACATATACCAATC
AGTGAATTTGCTGACAGTCAAATTACAATCTGTCTCCTGTCTTAGACATT
CAGTAGGAGATTGATTCATTTTTCGACCCAACCAGTTTGTCCCCAATAAT
GAACAATGATTAAAATGATAATAGTAGAACAATGATTGAATATGGACAAA
AGTGATTATTGTATGTTGGTGGTTGAATTGGCAACGAAATGCCACTGTAA
CTAATTTATTCGACAATCGTCATTCAACATACTCTACTCCCAACAAGAAT
GCTTAAAGAACCTGTGTTATGATGGCATGGTACTTCAACAGTAAGTACAA
ATATTTTTTTCTTTGTGTACATTTATAAGACTTGGTTTTATTAATCTTTT
GTGTTTAACCTGTGTTCTTTTTGATACTCACCAGGCACTATTTGGGAAAT
TATTATCAAAGATTGAAAGAAACTTTTGTGAACTATTTTTGAGGAAATTT
CAGTACACACACCATATAGGCAGTCATCGAAAAATTGTTCTATTCGCGTC
ACCCACCCCCATCAAATTNTGTTTGGTTCTACTATGTTTCATTTATATTT
CAAATTGGTTGAAATAAATAATAGTTGCATGTCTTTTGACTGGTTTAGTA
TCTGTAACTGTCTGTAATTGATTATACCTGGACACTTTTCCTAATTAATG
TTTTAAGATTCGTATTTTATTCTTTGTAAAAAGTAATTCACATTTTTAGA
AAAAAAAAATATGTTTCGTTTATGTTAGCTTATTCATTGATATCTCAAAG
AAAATGCTGAGAAGAATCATTCTAACTATTCCAAATCATTTCCAAACTTT
TGCTATAAAGCATTAAAAAGCCTTAAATTAGCATTAATTAGTTTTTACAA
GCATTTGTACTAGCGGGTGGCAGTTAGTGAAAGCTATGGCTAGTTATGTT
AGGTTGACGATTATCCTTATAACAAAAAACAACCATACTAGAAAAACATT
ATATTTATTAGTAATGGAAAATATATTGCTACTTGAATTTATGAGAAATT
TTGAAATATTAACCATTTTTTCCAATCTACATACCAATCTATCCAATCTG
GAAACTATAAGATTGTTCTCAACCATTTTTTTATTGCCGTGATGGTCGAT
TTAAAAAAAACCTTCTAGTCTATCCCAGTGACTATAGCTGGTCTTCTTTT
TGGGATAATTCTTGACGATTGTATCCAAACAGTACTAAGCCAGTACCGTT
AAAAGATTTTTGGTCGGGGGAACTTCATTGATCCAAATTTTGTAGAAGGA
ATCTTTGTACTTTATACCAAATTTTACCTAAATATGAATAACTCCTGATT
CTTATTTTTCTTTTCCCATAAGGGTTCAAACAAGTAAATAGGCTTGACAT
GACCTAGTATCCCTTTTATGCACGTTGTTTTTTGCGCACTGTCCGTATTC
CGCTAATTTAAAATTCAGTTATTTTTATTTTATGTGAAAAAAAATCAAAG
TCCATCCCTGAAAAAATCGAAAGATTACATTATTTTTGGTATCCATAAAT
GTAATCTACATAAATTATGCATAATGACGTCAATGTATCTATGTATTTAG
TCAGTTTTACTTTTTGATTGAAATATTGCTGTCACGATATCTTGTCTGCT
TTTTCAGATGTTAGCAATACACTGACCAGATTTCGCTTCATTCCGAGATC
GCAAGTCGTCCTAGAAACTACTCAAAGACAATTTTGACAAACTGACAAGA
CGGTTATTTGCAAGATATAAAAACTGATTTAAAGACACCTTCAAAGAAAT
TGGGAATTACTTCGGATTGAATTGCTAGCAAAGGTATTGTTTTTTTTAAT
TTTGTTCTTTTTATTGTGTGTACTAATTCAAATTTAAAGATAAGCGGAAA
GCTTGCGTCCCGGAGGTTACCGTTGAACTAGGTAGGGTTTTGTATTTTTC
AAAAATTTTCAAAACATGACCTTAAGGTTAAGGACCTTTCCTTTTGACTC
GAGATTTGGCCCAAATTTTGCTAGTCAGAAAAAACACGAAAAAAATTACA
TTCCGCCGAACTATATATTTCATTCCCCAGCTCAAGGACATCCACCTATG
ATTTGTCAGAGCTAGTTTGTTATTCGTCGGGCTATTAAAAATAATGCAAA
AAACCCTTGACCAGATATTTCACTTGTCGAACGGCAGCTCCCTTTCAGTA
TAAGCATAAGTACCCTTAGAGAATTCACATTTTTAGCCGTCTTGAAAATT
GTTCTGACTAGTTGATAATGATGCAAAGGTTATCGGGTATACTTTTAAAA
ATATTAAGCAGTTATTGGACAAAGTCGAATCCAATATGCAAAAATATTGG
GCGTGCGAGAAAAGATATCTTCAATATCTTTTTTCGTAGCCCAATATTTT
TCATATTGGATGAGACTGCGTCTAAATAAATGGTTTATTATAACATTATT
ATCCATATCGGACATTCAAACAACGTTTTTTCTAGCGTCAGCCAAGTCTT
TTCGCTTCAATGCAATGACTTTAACAAGTTTTGAGAACCTATGCGAGCGG
GCCGCAAATGACCGNATGTAGCCTCCATGGAAGCTATATATTCGAAAATA
TTGGACAGCAAAGAAGCCAATCAAATGTCGCTATTTACGCGCGTCGGATA
ATAATCTCTTTTATGATATGGAAAAAGCAACGCGCCTCTTATGTTGACAA
AGAAAAATTGACGGAAGAATTTCTCACGATTCTCGCTGCGGCGCGGGAGG
GGAAGAAATTTCTTCTTATGTTTGATTCTGTGTAAGCAAATGCAGCCCCT
TCTCACAGACAAACCCACTGTGACCCCTTACCACTGGGAAAACTGTCCAA
AATATCGTCCCGGTGGAAAATTATCCTTCAATTTTTGTCCCCACAGAAAA
TAATCAAATAAACAAGTCCTCGCCATTTTTCCAATCCCCGTTGCATTTTC
CGATTTAAAAGCAAAAAACTTTGAATCCCCAGCCGAAATATGGAAATATC
AATCCCCATCGATTTTAAATCCGATATTTTTGTCCCCACTGGCGGAAAAA
AATCCTACTGTGTCTTTGAGAAGAGGGTGTGCAAATGGTAGGAGAAGTTG
CTCTTCTCTCTTCAATATCTTAAGAAATTCCGGCTGATCCAATGCATTTT
GGCAGGAATATTTTGAAACACATGTTTACTGTTCAATCGTAAGCAGGGGG
GGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAAAAGTGTTTTTTTCTGACGTTAGTTTAGTCTTTTCGCTT
CAATGCAACGACTTCAATAAAGTTCCGAGCGGGCCGCAAATGACGTTATC
GCCCTATAATAAGGGCGGTTAATGATATTTCAGCCCTCTGAAGCGCGACG
CTTTAGTTTTCTCAGCGCGGGTATGACTATTTGAGTCATAGAACCTTTCA
ATACCGCCCGCCGTTCGAATCTTTAATGGCTTACTTAATGACCGCTATAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAGGGGGGGGGGGGGGGTCGGTACTAAAATTTCAGACATCATGACTTTTG
ATGACGTGGTGGTATTACAAAAAAAACTTTAAATTATTTCTAGTACCATG
TGTACTAAAATCCTAAATTAGGTGGGATCTTCAAGAATTTTTAAAAATAA
TTTTAGTACATGAGTACTAAAAATCACCAAATTTTAGGAAATTTAACTAT
TGACCGAGCATTTTAGGCAAAATGAAAAAAAATAACAACTTTTCATATAT
AAGATTTAAACACCTCTGTGTCACAAATTAAGCAAAATTTATTTCGTCCT
CGATGGGAAAATACCCTTGAATTTCAGCCCCACTGGGAAAATGAATTTGA
TTCCCACACGAAATTCCATGTTTAAAAATTGCACTCCAAAACCATCCCCA
CTGGGTTTATTAACCTTGGAAAAATAAAATTTCTATCCCCAATAGCATTT
CAATAGGAATTTTTATCCCCACTGAGGAAAAAGGTTCTACCGGGGCTGTG
AAACAGGGGTGTTTCTGAGTCTTTATCTAGAATAGAGAGAGATTGATCAA
AATAAGCCTAATTTAGGTGTTCACTATGCTAAAATATCAAAAAAAATTCC
TTTTTCAAAAATTAGGTGGGGGTATGTCAAAAATCGTCAAAAGACCTTTT
AGTACTCATATGTGTCTTGGATTTTAGTACCGACCCCCCCCCTGTCGTAA
GTTTTATTTGAATTTAAAGGGTTCGTGTTTTTTGTTTTGATTTGATTTGA
TTATTTAGTTGTGGGCTGGTATGAATTAACTGCATTTCATGAAAAATTCA
TCCTTGACTGGGAAAAAAATGTGAAGAAATGAAACGCCTTTCATGATTGT
GTCTGCCTTTTAAAGGCGGATCAGTAATATTTCCCGGTTACTTCATCAAC
TTTATAAATTATTTCGAATAATTTTTCATAAAAGATTCTGTGATGTTTAA
CTCTTTCCCCTTTAGACCGGTGTCAGAATTAAATTTCTTGGATATTTTCT
TTTTAAACACCGCTGTCTCACAAACCCGGTGGAATTTTTTTCCTTAGTGG
GGATGGTCTTGGAGTACAATTTTTAAACATTGAATTTCGAATGGGGATGA
AATTAAAGTCAATTTCCAAGTGGGACTGAAATTCTAGGGTATTTTCCCAC
CGGAGACGAAATTTTTGCCAGATTTTCCAGTGGGGTGGGGTGGGGTCCCA
GCGTTTCTGTGACACAGGGGTATTTTTAAGTGGATTCCTGGTATACAGGA
GCTTAGGTCTTTGAAAACCAGTCAAGATAAAATGAAATGATTCCAGAATT
TTCCTCTTATGATTCACTGTTTCAAATTGTGATTTTTGATTGAAGACGAA
AAATAAATTCTACGGTGTTGTTTATTTGAAATTTTGTTTTCCAAATGTCC
AGTCAATACAGATTGTATTTTCGTTGAATCTTTTTTTGAATAAATTCTAA
AATTCGATACGTCAATAGTAGTGGGATATGTTTTTTTTTGATGATTTTAT
AAATATTTTTCACCCGCCCTTGTTAAAATATTCCTATTTCTGTGTATTCC
GCAGGGGTTGAGCTAAATATTGATGGTGGGAAGTCTAAACTTTCCAAGTC
CATTACCAATATTACTCATTCCAATAAATGTTTTTTTTTTATGAAAAGCA
TTTTGTATTTATTATTCCATTCCTATAATTCATTTTCACTTTTTGATTTA
TATCGAATTTAGTTTTCCTAAATATCCTCAGGTGGACCATATACTAACCT
CTTTCTATAAAATATCATAGATTCTTCAAAATAGCTTAAAAAATATTTTC
ATAGCAAAATATCATTGAAAATAAATACTTTTTAAGCTATTACATACAAT
TTTTTCGAGGGAAATTTTCCCGAAATTTGACAATAATTTGAAGTAAATAG
TCTTTTCATTTATTTACCAAAATTTGAAAAAGAATTTTATGTTGATTTGC
GTTAAAAGTTCAAGTGAATTTATACTTAGTTAAAAAGTGTATAAATTATA
AATTTTAGGGGGCTGGCATCTATTTTTTTGGGGGAAATTTTCCCTAAAAA
ATTTACACGCCCTCTTTAAAATACTGGTGTAATAGGAATCTATAAACCAA
ATTAATACTTTTAATTTTTGCTTTTGCTTCCTTCCTTCTCTCCTCTTTTT
AAAGGACAAACAAATAATTCCCATAAGGGACAATAAGTTAGTCATTTCTT
TACAAATTAGCAAACCAGGGGGTTTGGTTGCACAATATTTATAAAGGATG
AAGCAAAAAAGATTTTCTTCAACAATTTCAATTTTCATTTTTGTTAGTTA
ACACGCTTGAGAAAATTTGTTGCCATATATAGTTTGTGAAGAGGATATCC
TATCTTTTACTTTTCTTATTGATTACTGAGGGCGTAAGATTATACTTCTC
ACCTCACACCACTGTGCGCAAGTTTACTGAACCGAAGAAGTAGAAATTAT
TCACACTGGGGCCAAGACCCCCTGCTGGTAAGATTACCTCATATCATTTT
AACCATTTATTTACTATGGTTACCAAATCGATGAAAAGAAATTTCCGCTG
CTGTGCGTAGTGCGTGCGATTTTTTTTCTCTTGTTTGCGCGGGTGTCGAT
TTCATGTTTTTCCCGTTTGTTCTAAAGCTTTTTCCTGCCCTTTAAATTCA
TACAGGAAATTTAAATATAGTTATTTCATGTTGAACTTCTTGAAAATATT
GTATGCTTATTATTTTTTTGTATACTTTCTAATGATTACCGCGTTTTTCA
CTCTGCGAATTTCAAAGGAGCGCATTTCAAAATATTTTCACCTTGAGGAA
TGCGTAATTTTGCCTTACTTTTCCTGGTAATGCTTTATGAAAAGCCGCAT
GCATTTAAAATTTCATCTAAACACTAGAGTAGTGATACTTTTGGTTTGGA
TTAACATCAATAAGTAAACACAATGTAGTAAAAAAAGTTTTACCTTTGAA
GAAGAAAAATTGAATAAAAATGGTGAAAAGATACGAAAACAATTTACAAA
TTTGAACAGCTTTTGACAGAGATTGTATTCAGTGATTCTATGTTAGGGTG
TGGCGAGGGTTAAGGCACAACCAAGGGCCTCAAGTGAGTAACTTTTTTAC
TGCTTCACAGCTAGCCAGAAAATCATGCCTATTGCGCACCATACGTTTAT
TGATACAATATTAATCAGATATTGTACATGGAGTTAAGAAAAAAAGAAAA
TTGAAAAAGAAATTTCAGGAAATTTAACAATTTGTGTAAATTTAATACAC
GGTTTTCTTCCTTTGATTATTAAAGAATTCACGATTATTATATAAGAGCG
TTTGTATTTCATGGTATAAATTCAGTTTGAGGGAAAAGGTCAACCAGGAA
ACAGCCTGGTAGTTTGGAATTTTTAATTTTTAAAAGTCATAGATTTGCTG
AAAAATGAGGTATGATTTAAATTTGATATTCTTTTTTTAACGGAAAGGTT
TTAACTCTAAAAATACATTAACAGAGGTTTTGCTTTGTTTTTGGTAGGCT
GGCGAATGAAAAATTAACTCTTTTTCTAAAATTTTTCTAGATTCTAAGCC
GGCGAATTCTTAGCAAGCGTAATGTGTTGATTCGCGTAAATATGTACTTG
AGGCGGTGAACGGAACTTTTTGAACGGCGAATTGTAATTTTTTTCGTGCC
TTGGACCGGCGAAATTCACCGTTCGCCGGGCCTAAATAATACCCTTGCAC
AAAAAAAAGTCTCCGCTAACCAAGAAACTTTGGTAGTGATAAGGATTAGC
AGTATTTGTAGTATATAGGCTTGTCTCACAGCCACGATGGAACTTCTTCT
CACAGTGGGGGAATTGAAATTTTATCAAAATCCCAATGAGGATGGAAATT
CTATTGTTCCCAAGGTTAACAAATCCATTGGGGATGGTTTTGGAATACAA
TTTTTCCATTGAATTTCAAATGAAGATAAAGAAAAACTCCCAGAATTTCC
CAGTAGGGCTGATATCGTGGAGTGTTTTTCCCACCTGAGACGAATTTTGA
TCAAATTTTCCAGTAGAGCGAGAGTTCCACCGGGTCTGTGACACAGCACT
ATTTTTCGTGAATTTCTATATTGCTTCTATATTTTGACCAGATAATGTTA
AAGGTGGCTTCGATTGATTCTTTCCACATTATTTGAAATTGCATTCCGTT
TTCCTGGAAGTCTTGAATCGTCGGGCCTCTCATACAGGATTTTTATCCCA
TTAATAGATCGTACGTAAGATGTGTACGTGACTGAATGTTTGAGTAAGAA
TTTCAACATTTCTTCAATTCTGGGCTTAAATATTTACGAATACGGTTTTC
TTTTTCGCAAATCGCGTGCTTCATACATTTGTTAATGACAAGCTTATTAT
AAACAACGTCTTGTTGAATTCAACACTTTGACATAGTTTCTACAAACTTA
TTACACCGTAAGTCGAACCTCCAAAGATTTCGCTTTTGATTTATTTAAGA
TCCCTCATGCTTGTCATTTTGTTTACCCGGCATCATGATTTTCAACGAAG
TATAAAAAATTTAAGGTCATGCATCTTTTTCTCAGGGAATTACATCAGAG
TATTTTGTTTGAAGTCAAGAATTTTGAAGATAACTTTCCGATAGATCAGT
GAAAATGACCGAAAATACTTGGAAATCTTCTCATCTTTACCGACCTTGAA
ATTGAAAGGTATAAAGGAAGGTTAGGGAAGGCAAAGTCATTATTCGAACA
TGATAAAACAGTTGGCTCGTGTACAAATTTCACTCAATCTTTTACCCAGA
GCCAGAGTCACTAGCATATCATAATTTTTTTTTTATTTTTACAATGCTTG
TGCGAGCACTATCAGAATAAAAAATGTGAGCAAAGGGACTAAGCTCGAGT
TTCAGTATTATTTCCTTGTATTGTATTGCCAAAAGGTACCTTTTTGTACA
AATTAAAAGTGGTCAAATTGGCTGTTATATAAAAATTACATCGAAATCTT
CTAATCTCTTTTATGCTTTTTTCTCTTCTTCAGTAACTGTGCAACAATAA
ACAACCAATCACAGACGTTTATCAAAGAAGAAGAGCCAATGGGAATCGCA
GGAAAACTCGAAAACAAAAGCGTCCACATTCACCAAGATGGCGGATTGAG
TCATGTGATACATTTCAATGATGGTACAACAACACGGACACCGAAATGTG
CTCGATGTCGAAATCATGGCCTTGACCGAGAATTGAAAGGTACCCCTATT
TTAGAAATTATTTTTACTGCGTCGTTTTATTTGAGCTTTTTGAATTTTCA
GAGATCCAAGAAAAAATGCCTAACGCGTTTGTAATTGCAAGCTTCATTAG
TTTATATAATCATAAAGACGTTAGACTTAAGACCTTGATTTTTTTGTCGA
TGAAAATTCAAAAATCACGTCTTTGAATTCATTTTGAATTCATCTTTTTA
GGACATAAAGAGAAATGTGAATTCAAAGATTGCACATGCCGCTCATGCTT
AGTTGTTGTTGAACGTCAAAAGATCACGGCCGCCCGTGTGGCTCATCTAC
GCCAACAACGTAAAGTGGCCGCCAAACGTGGGGTCGCTATTCCCAACCAT
AAATACTCACATTATAACCCGTTGACGGAGGAAGAAGAGTATATCTTATC
TTCACCCTTGCAAAAGAAAACCACAAGTGGAAAAATATCGCCAACCTATC
ACCAAGGTAAATCCCCGAATGTTCTGATATGTTGTTTGAAGATGAGATTG
AGATACAGTGTTTTAGAAATGAAAAAAATGTTTGATTATTTACCACTCGA
AACTTGCAGTAAAATACTTATTATGATTTTTAAAATTTTTTGCTATTAAG
CACTTTGTTGACATAACTATTATTTGGGGCAACATTGGCTAATTTTCAGT
AGCCATTATTTTCAATGTCCATTTTCATTTTCATTTTCTCAGGTCATCAT
GTCACTAACCGGTATTATCACCATAAACCAACATGGACTTCTTACCAACC
ACCAACCCTCGCCAAAAACGGATCTCATCCTCCCTATCCTTCCCCACCAC
GGAGAGGGGAGTACCCACACCACCACCATCATCATCAGCCCAATGTAGAC
AAACCAGGTCCAATCAGATACCACCATTCTCCTGTCTATCACTATCAACC
CTACCCTGTGGCAAGGTACTTTCCCTACCATCAGCCACACTACCAGCATA
CTTCATGTCATTCCCCACCTAGGGACTCTATGAGATCATCACCTGCATCT
CTCCCTGGAAGTTACATCGTCCCTTCCCCTCCTTCCATACATGATCGAAG
AGACGTCTTCAGGCCGATTGTAATCGACCCACGGCGTGACGATGCCAGCG
AATCAGAAGATGATGACGTCATTGATGTAGTCATGGAAACAAGAAATAAA
GATGGTCGTCATGGTAACTCTAAACAAAGAGATGACAAGAAAATAGAAGC
TCTGAGAGTGATGTTTCCAGATTTAGACATGCGCTCGTTACACGATCTCT
ATGAGGATTTTGACCAGGATGTCCAGGCGGCTGTTGAATATATGTTATTC
AAAAAGCGTAAAAACGAACAAGAGGAATTCAAACTGAACAATCAGCAGCA
ATCATCAATCCTCACCACAACAGATTCTAAGAGAAGTTTAATACATTCTC
CAAAAACAACTACTTCATCTAACAACAAACCATATTATATTGACTCTCTA
ATCAGTAAATGTCAACCTAAAGACAACTCTGATACAAATATGAAAAGCAA
AATATCAATTTCTTCGACTGCGTAAAATCATTTACAGTAAATAGATAATT
TTTTATAATATAAAGAATATTGTATAAAAATTCTTGTTATCCTTGTAAAT
ACTTTAAATAATACACCATTAAATTGACGAAATGGGTTCTTCCAGAAAAT
CTTTGTACATGGGGGGTGGAGGATATGTATGGTGGGGTGGAGGATATATT
GGATATTTTGTCCGGGGGCAATGGAAAATCTGCAAAATTTGCCTTGTTTT
GGGGACGAACTTGCTCTGATTAGGGGTAATTTTGATTATCTTGGGGGGTC
AACTGATGCTTATCCGGGGGGTCAAAATTAACAATGTCCGGGGGTAAATG
TGCAAAAAATATTATATCCTCCACCCCACATAATATATTTTTTTCTGAAA
GAGCCCAATACCTGAGGGAACTAGGCTCAGTTCACTTTACCATGTAGGGT
TGATTGAGATTTGTGGCATACATTTATCCTACGGTACAGTTAGAATTGAG
AAGGCTCCTCTGGACTGGACTATTTTCATCAAAGCTTAAATAAATCAACC
TGCTAATTCGAACTGGAACGAGAAGTCGAATTACAGAACGACTCGAATTT
ATGGAAAACATTGTACTAGGGTTTCCCTTAGACCTAAATCAATTCTAGAA
AGATTCAGATTAACTCGAGAGTTCACTACACTTAGCATCGCCCTTTTTGT
GGAAGTTCCCTCATAGCCCTCTCCACATTGTAAAGGTTTTATGGAAAATT
TCTCTCTTTAAAATTTAACGTAAATATCAAACGTCATACTTGGGAATAGA
CCATGTTATTATATTTCTATGCCTTTCGGGAAATATAATTCGATATTTTC
TGAAACTAATGCAAATAGTTATATTATTTTAATGTAAATAAGATATATAA
TAAATCATGACAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036882XLOC_036882Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058553-exon-scaffold_311-1575043694:916159..916214TCONS_00058553-exon-scaffold_311-1575043694:916159..916214Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1575043694:911982..912157TCONS_00058553-exon-scaffold_311-1575043694:911982..912157Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1575043694:903226..903431TCONS_00058553-exon-scaffold_311-1575043694:903226..903431Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1575043694:902759..903013TCONS_00058553-exon-scaffold_311-1575043694:902759..903013Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1575043694:900798..902522TCONS_00058553-exon-scaffold_311-1575043694:900798..902522Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1510915933:916159..916214TCONS_00058553-exon-scaffold_311-1510915933:916159..916214Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1510915933:911982..912157TCONS_00058553-exon-scaffold_311-1510915933:911982..912157Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1510915933:903226..903431TCONS_00058553-exon-scaffold_311-1510915933:903226..903431Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1510915933:902759..903013TCONS_00058553-exon-scaffold_311-1510915933:902759..903013Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1510915933:900798..902522TCONS_00058553-exon-scaffold_311-1510915933:900798..902522Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1491911889:916159..916214TCONS_00058553-exon-scaffold_311-1491911889:916159..916214Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1491911889:911982..912157TCONS_00058553-exon-scaffold_311-1491911889:911982..912157Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1491911889:903226..903431TCONS_00058553-exon-scaffold_311-1491911889:903226..903431Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1491911889:902759..903013TCONS_00058553-exon-scaffold_311-1491911889:902759..903013Clytia hemisphaericaexon
TCONS_00058553-exon-scaffold_311-1491911889:900798..902522TCONS_00058553-exon-scaffold_311-1491911889:900798..902522Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:900798..916214 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19932	1.16802	0.838334	1.12902	0.0889175	3.545e-06	0.670739	0.534758	0.257456	0.830406	0.122713	0	3.37589	2.16047	0.927142	0	1.24921	1.19393	15.4759	16.17	2.34078	1.2771	0.263395	1.09932	0.0405355	0.954001	4.49458e-05	0.704702	0.105251	0.885242
Blast
[Close]
BLAST of TCONS_00058553 vs. Swiss-Prot (Human)
Match: DMRT3 (Doublesex- and mab-3-related transcription factor 3 OS=Homo sapiens GN=DMRT3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.102e-17
Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 3 
Query:  384 RTPKCARCRNHGLDRELKGHKEKCEFKDCTCRSCLVVVERQKITAARVAHLRQQ 545
            RTPKCARCRNHG+   LKGHK  C FKDCTC  C++++ERQ++ AA+VA  RQQ
Sbjct:   25 RTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQ 78
The following BLAST results are available for this feature:
BLAST of TCONS_00058553 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DMRT32.102e-1764.81Doublesex- and mab-3-related transcription factor ... [more]
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