TCONS_00058476 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058476
Unique NameTCONS_00058476
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3799

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058476 ID=TCONS_00058476|Name=TCONS_00058476|organism=Clytia hemisphaerica|type=transcript|length=3799bp
cgaaaatcgaaaatgaaatttCTGACGTCACACCCGAGCTATTCCAAGAA
TGTTCGCATTACTCGTGCCCAGTCTTACTTATCATAACATTGGTAAGATG
GCAGCATCGAAAAGCACAAAAGGGTGAACAAAACTGAAAGATTTCTACTA
caattttcacattttgtatACCCTTGCCGCTGCTGTGAATGAAAATGCAT
TGCTATGGATTCGAATGGGGCCTTCGTGAAGACTGCTGTGTATGAATCAA
TCAAATCCATCGCTCTGAAATCTGATACAAATGTTCTGTCGTAACAAGTT
TTGCTTTGAAATACGAAcgtaaaaacttaaaaagtcaCTTCGAAATGGCA
GCTAGTGACATTTATAGAGATATTTTGAAAGACAAAGACAGGATGAATCC
TAGGACAAGATCTTTTGGTGCTTTGAACAGTGGGGACAATGATTATAAGA
ATTATCTTGCTGGAATGAGACCAAGAACCAAAAGTAATAACACAACTGCG
GATAATAAACAACCTTCCAACAACAAACCAAGCTTTGTTGATAGTGCTGC
TCGAAGGACACAGAATACAGCCCAGAATACCTCAATGGCTAGTAATAAAA
ATGATTCAAGAGCAAATTTTGTTCAAAGAGGAAGAAATAAATCTGACAGC
AGTTTGGATAAAGAAGACACTGAGAAAAAGAAACAATATACAGAATTGTC
ATCAGTTCCCTCTAGAAGAAGTGTTGATAGTACATTAAAAAAAGCTGAAG
ACAATCATGCTAAATCTAAGAGTAATGATATTGATTTTGATAATTTAAAG
CATGCACAGAGTGACTTTACAGGCTCTGTTGGGCGCTTACGATCTATGTT
TGATAAAGGTTCTGATGTTGAGAATAAAACAGTTGTTCAATTGAGAGGTA
ACAAAGTCAAAAAGGACAGACCCCACTCTGCAAGCTTTGACAATATTGAG
ACTAAATCCAAAAGTAAGGTCTCTGGCATTTATAATCGACACAGTGTACA
TGTTTCACCCCTTCAAATTGACAGTATTATTACTTCAAATGGAGAAGAga
gtgaaagtttgaaagaacAAGAGGTAGAAAATGACCAGGTTGAAAGCAAA
AGCAAGGGAAGGATTGATATTGACTCTCTTCTAGCACCAGAATCAacgaa
agaagaaaaggaagaagaaaagaagGATGATGTAATCTCGCCTAGAGATC
AAGAAATTGAACTTCAGAAACAATTGGAGATTGATCGTATGAAAAGAACA
CAAGAAGAAATTGCTATTGAACAACGTTTTAACATAAAACGAAGGACTCT
GAAGGAAAGATTAAGTGACTTAGCTGGGGGGAATGAAAATGTTTCTTCCT
ATGCCCCTGTTGATTCTATCTCAGAAGATTCTAAGCCTATGAAAGTTGCA
CCTCCAGTTGCAGCTAAGCCATCCCAACATCCATCTGACAAAAAATCTAA
AGCTGAAACAGAACCATTGAGCATTTCTGAAAATAACATTATAAAAGAAC
CTTCACATCATACACCAGAAACACCTAATTTACAATTACCAGAAAAAGAA
GCTTCTCTAGATTCTTCTAAAATTGAATCAAATATTCAAGAAGAAAACCC
TATTAACAGTGCAACTGAAATTCAAACAGACTTTTACACTAATGATGAGC
CAATTCATGATAGTGATGAAGTAACTTCTTCAGAGGGTAAAACTTTACCT
AATATTTCTCTTAATATTCAATCTTCATCGCAtgaaaaatctacaataca
AGAGCTATCCCAGGAAGTTGAAAGCATTGTAGAGGAGAAGGATCAAGTCA
CTAAAGATAAAGATGTTCCAATTCCTAAAAAAGACTCTNAGCAGTTTGGA
TAAAGAAGACACTGAGAAAAAGAAACAATATACAGAATTGTCATCAGTTC
CCTCTAGAAGAAGTGTTGATAGTACATTAAAAAAAGCTGAAGACAATCAT
GCTAAATCTAAGAGTAATGATATTGATTTTGATAATTTAAAGCATGCACA
GAGTGACTTTACAGGCTCTGTTGGGCGCTTACGATCTATGTTTGATAAAG
GTTCTGATGTTGAGAATAAAACAGTTGTTCAATTGAGAGGTAACAAAGTN
CCAAACTTTTTGATACTCAATCACCAAGCCAAGTTATGCCTCAAACTGAG
CCAATCAAAGCTAAGGGAAATAGCAaggacaaaaatgaaaatggtaGCAC
TAGTTCCTCAGATTTGATGAGTAGCATTCTAAGTCACATGGAGCGATCAA
ACCGTGAAAATCTATTCTCTGCATCTTCAGAGGCTGAACCAGTCAATCAA
AAACCACCTACTCAtgatatcaaatctccaactcatgatatcaaatctcc
aactcatgatatcaaatctccaactcatgatatcaaatctccaactccTG
AAGCCCCTCCACGTTTGAGCAAACTTCAAGGACGTTCATCACCAGCCACA
TCTACAACTCAATCAAGTGTATCTTCAAATCCACCAAAATCTCCCCCACC
ACCAGTGCCATCCTCAGCATCTTCAGTGTTTAGTGAAGATCCATTTACAA
ACAAAGACCAATATAAAGCAGATCCTACACCACCTCCGCCACCACAGAGG
CCTTCAACTTTAACGATTTCTCAGAACCCACCAAACTCAACTTCTTCAAC
CATATCTTACATGCCAGACTCTGGTGACAGTGAGACTGAAGAGTCTGGGT
ATTATAGCATGAACAACCCTAACACATCTGATAATTACAATGCAAGTTAT
CAGAATGTAAACGGTAACATTGACACAGAAAGTTTCAAGCTCCCAGCACC
CCCTGCTAAGTCGAACCTGAAAAAGTCAAAAGCTGATAAAAAGCGCAAGG
TTGGTTTTAGAGATGGTGACATACAAGAGGTTGTTTATACTTATGGTCCT
ATTGAATATGATAGAGCCAACGCTGATATTGACCCCTTAACATCATCTGC
AGAATGGGAGCTGGAAAAGAGAGTTGATAGCATGGATATCTTTTCAGTTG
ATCTACACAAAGatgAGAAAGGATTGGGTCTCAGTATCATTGGACTTGGT
GTTGGAACACAAAAAGGTTTTGAGAAACTTGGAATATTTGTCAAGACACT
TACAGAAGGAGGTGCATCACAAAAGGATGGAAGgaTTCAAGTCAATGATC
AAATTTTGGAAGTCAATGGTGTTTCTTTGGTTGGTGTCACTCAATATTTT
GCTGCTCAAACTCTCAAAGGTGCCAACGGTATTGTAAGGTTTCTAATGGG
ACGTGAAAAGAACAAGCGGACGCAATATGCTCCTGGTGCACCGATGTTGG
ACAACCCTGATATGAAGAAACACATAGATGAGATGAACCAAGCCATGGCA
CAGGTCGAGGAGTACCAAACAAGAACTCTGGAAGCGGAACATACACTGGA
AGAAGTCAAAATGGAATTGCTGAAGGCTGAAGAAAGAGCGCATGATGCTG
AATACAATTTGAGCGAAACGAAAGAAATGCTGAAAGCAGCCACAGAGTCA
CCTTTCGTTAACAGTCAgagaaagttgaaaaatgaaataaagaagGGCAG
CAAACGAAGTGGAGACAAAGTGGATGATTTGCAACGTTCATTGAAAGAGA
TGACGAACAGACTGAGCACTTCAGAAGAAAACCTTCTAGATCTCACGTCC
AAGTTTGATGTCAAAGACAAAGAACTCTTAGAGttcCAAGAGATGCTTGA
AGCAAAACATGAAGAAGAACGCCAACTGTCGGAACAAAACCAATCCATCT
CTCAAGAGCTTGGTAACAAATCGAAAGAATTGGAAGCCTTGGAACAAAA
Run BLAST on NCBI

transcript from alignment at scaffold_311:993266..1008770+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058476 ID=TCONS_00058476|Name=TCONS_00058476|organism=Clytia hemisphaerica|type=transcript|length=15505bp|location=Sequence derived from alignment at scaffold_311:993266..1008770+ (Clytia hemisphaerica)
cgaaaatcgaaaatgaaatttCTGACGTCACACCCGAGCTATTCCAAGAA
TGTTCGCATTACTCGTGCCCAGTCTTACTTATCATAACATTGGTAAGATG
GCAGCATCGAAAAGCACAAAAGGGTGAACAAAACTGAAAGATTTCTACTA
caattttcacattttgtatACCCTTGCCGCTGCTGTGAATGAAAATGCAT
TGCTATGGATTCGAATGGGGCCTTCGTGAAGACTGCTGTGTATGAATCAA
TCAAATCCATCGCTCTGAAATCTGATACAAATGTTCTGTCGTAACAAGTT
TTGCTTTGAAATACGAAcgtaaaaacttaaaaagtcaCTTCGAAATGGCA
GCTAGTGACATTTATAGAGATATTTTGAAAGACAAAGACAGGATGAATCC
TAGGACAAGATCTTTTGGTGCTTTGAACAGTGGGGACAATGATTATAAGA
ATTATCTTGCTGGAATGAGACCAAGAACCAAAAGTAATAACACAACTGCG
GATAATAAACAACCTTCCAACAACAAACCAAGCTTTGTTGATAGTGCTGC
TCGAAGGACACAGAATACAGCCCAGAATACCTCAATGGCTAGTAATAAAA
ATGATTCAAGAGCAAATTTTGTTCAAAGAGGAAGAAATAAATCTGACAGC
AGTTTGGATAAAGAAGACACTGAGAAAAAGAAACAATATACAGAATTGTC
ATCAGTTCCCTCTAGAAGAAGTGTTGATAGTACATTAAAAAAAGCTGAAG
ACAATCATGCTAAATCTAAGAGTAATGATATTGATTTTGATAATTTAAAG
CATGCACAGAGTGACTTTACAGGCTCTGTTGGGCGCTTACGATCTATGTT
TGATAAAGGTTCTGATGTTGAGAATAAAACAGTTGTTCAATTGAGAGGTA
ACAAAGTCAAAAAGGACAGACCCCACTCTGCAAGCTTTGACAATATTGAG
ACTAAATCCAAAAGTAAGGTCTCTGGCATTTATAATCGACACAGTGTACA
TGTTTCACCCCTTCAAATTGACAGTATTATTACTTCAAATGGAGAAGAga
gtgaaagtttgaaagaacAAGAGGTAGAAAATGACCAGGTTGAAAGCAAA
AGCAAGGGAAGGATTGATATTGACTCTCTTCTAGCACCAGAATCAacgaa
agaagaaaaggaagaagaaaagaagGATGATGTAATCTCGCCTAGAGATC
AAGAAATTGAACTTCAGAAACAATTGGAGATTGATCGTATGAAAAGAACA
CAAGAAGAAATTGCTATTGAACAACGTTTTAACATAAAACGAAGGACTCT
GAAGGAAAGATTAAGTGACTTAGCTGGGGGGAATGAAAATGTTTCTTCCT
ATGCCCCTGTTGATTCTATCTCAGAAGATTCTAAGCCTATGAAAGTTGCA
CCTCCAGTTGCAGCTAAGCCATCCCAACATCCATCTGACAAAAAATCTAA
AGCTGAAACAGAACCATTGAGCATTTCTGAAAATAACATTATAAAAGAAC
CTTCACATCATACACCAGAAACACCTAATTTACAATTACCAGAAAAAGAA
GCTTCTCTAGATTCTTCTAAAATTGAATCAAATATTCAAGAAGAAAACCC
TATTAACAGTGCAACTGAAATTCAAACAGACTTTTACACTAATGATGAGC
CAATTCATGATAGTGATGAAGTAACTTCTTCAGAGGGTAAAACTTTACCT
AATATTTCTCTTAATATTCAATCTTCATCGCAtgaaaaatctacaataca
AGAGCTATCCCAGGAAGTTGAAAGCATTGTAGAGGAGAAGGATCAAGTCA
CTAAAGATAAAGATGTTCCAATTCCTAAAAAAGACTCTNAGCAGTTTGGA
TAAAGAAGACACTGAGAAAAAGAAACAATATACAGAATTGTCATCAGTTC
CCTCTAGAAGAAGTGTTGATAGTACATTAAAAAAAGCTGAAGACAATCAT
GCTAAATCTAAGAGTAATGATATTGATTTTGATAATTTAAAGCATGCACA
GAGTGACTTTACAGGCTCTGTTGGGCGCTTACGATCTATGTTTGATAAAG
GTTCTGATGTTGAGAATAAAACAGTTGTTCAATTGAGAGGTAACAAAGTN
CCAAACTTTTTGATACTCAATCACCAAGCCAAGTTATGCCTCAAACTGAG
CCAATCAAAGCTAAGGGAAATAGCAaggacaaaaatgaaaatggtaGCAC
TAGTTCCTCAGATTTGATGAGTAGCATTCTAAGTCACATGGAGCGATCAA
ACCGTGAAAATCTATTCTCTGCATCTTCAGAGGCTGAACCAGTCAATCAA
AAACCACCTACTCAtgatatcaaatctccaactcatgatatcaaatctcc
aactcatgatatcaaatctccaactcatgatatcaaatctccaactccTG
AAGCCCCTCCACGTTTGAGCAAACTTCAAGGACGTTCATCACCAGCCACA
TCTACAACTCAATCAAGTGTATCTTCAAATCCACCAAAATCTCCCCCACC
ACCAGTGCCATCCTCAGCATCTTCAGTGTTTAGTGAAGATCCATTTACAA
ACAAAGACCAATATAAAGCAGATCCTACACCACCTCCGCCACCACAGAGG
CCTTCAACTTTAACGATTTCTCAGAACCCACCAAACTCAACTTCTTCAAC
CATATCTTACATGCCAGACTCTGGTGACAGTGAGACTGAAGAGTCTGGGT
ATTATAGCATGAACAACCCTAACACATCTGATAATTACAATGCAAGTTAT
CAGAATGTAAACGGTAACATTGACACAGAAAGTTTCAAGCTCCCAGCACC
CCCTGCTAAGTCGAACCTGAAAAAGTCAAAAGCTGATAAAAAGCGCAAGG
TATTCATACATTTCTCAACTATAACTAATAGGAGACCTAGAAATAATTCC
TAAGGTTAACAAGATTTTATTTGCTTGCTTGGCTGGTAAACTTTCTTCAT
AAAAGATCTTTATTAATTTACAAAGCCAATAGAGGCTTGGTCAAGATTTT
GTCTAccagaaatttatattttacttGCTCTCTACTTTGTACAGGTTGGT
TTTAGAGATGGTGACATACAAGAGGTTGTTTATACTTATGGTCCTATTGA
ATATGATAGAGCCAACGCTGATATTGACCCCTTAACATCATCTGCAGAAT
GGGAGCTGGAAAAGAGAGTTGATAGCATGGATATCTTTTCAGTTGATCTA
CACAAAGGTAAATTAAAAAACTTCTACAAattactcttgggtacctaata
gccaaggggttggaaaaaacctcaaaaattaataagtgggggtttggaat
aagaatgtcctgggtggaaaatttttcaaaaattaactaGCAGGGGCACA
CTTATTAAGTACCCAAGAGTATATTAAATTATTCTTtcctagtttttttt
tttaattttagtaaaTAATTAAGGGAGTGATGTTTTGCTTTATGTTTTGC
TTTTACCAATTAAAGAGCAGTATGTTTTGATAGGTGTTTTAATGAAGAGG
TTGGCTTCCTTTAAATGATATAGTCTGTCCAGCCAAGTCTGTTGCTTTAA
TGGATCTTGATTATATGTTGTAATTTTAATTGCCTAATTAACTGAAAGTA
GCATTTAATAGTTGGTTTTATTATCTATCTATCATAATAATTTTCCTCCT
CCTCTTTAAAagtaaacatttcaaaattcatgttttgTTTATACTATTTA
GTGTTTCAAAAGATTATATGCACGTATGCAAAAATTGTTGGCTTGCAATA
AGCAACACAATCCATTGTAGGCTGTAAGGGTGTGAATCatcataagaaaa
taaaaaaagatttcgaaCTAAATTCTCTGGAAATATATACTTAGTTTTCT
TTATTACTATAAGATGTTGATTCAGGTTATTATGTCTGacataaaaagtc
aaaatacaGTTTTAATGAGGAATATGGGGATTAAGAGATGATGTACATAT
TCAAAGAGAGAATGGCATTTAAATTTTAAGATGTATAGATACCATCTCTT
ATCTACGGTCATTATTTTTATGCAGTAATTTGATCAAAAAGGGAAACTTA
TTAAGCTCCCACAACATTTTGTATTGAGATTTTTTCTCTCACTTTTAAAT
CATAGATATATATAATCTGTTTGGATTTTAtaagaaagttttgaaagtcC
TTTTGTGCAGTATTGTTCTTACATCTGCTTACATCATTTATTCTGTCTGC
ATTTTAAAATGTATGTTGGTTTTTTCTATAGAGACATATGTTACCCATAA
TGCAATAGCAAATTATAAGtagaaaaatttttataatgaattttgatgtt
tacaGCCtgatgataaaaatatttttatttatcatttttctcttttactt
tTCAAACAACAACAATTTCAACCTACAAAAGTATCAGATTGCAGAAAGTG
TTTGCAAATAATTCCCTTCTCATGACAGTGACACttattttaaaattcaa
ttcaGCCCTCTTCAGTAAATTCTTATAAACCGAATCTCTGGAGCATGTTT
TGTCATCCTTATACTAAACTACATAGTGTACTACACTAATagaatttcat
attttgtgTCTGCCATGCAAGATGGTAGCAAAGCTATGTTGCTCGATTGA
AGAAAATGTAAAACCTTGGGGTTCATTTTGATATTGAAAGAAGATTTGAA
TGCACAAAACAAATTgatattaaaacatttttttctgaattatttttatt
tttaataggTGTCTTGTGTCTTTTCATCTGTAACTAGAATGCATTACATA
GTGACTATTCTGCACTTgataatttaacttttttaattttcttagtATAT
acctaaaacaaaaatttcattgaaatcgAGCCCCAAGAGTTATTCTTTGA
TAATAACTCTTCTGACTTGCTGATTTCTTTTCCTTATTAGTATTTAAATG
TAATTAAAGTACTGGTTTTGCAGTACTTACTATTGTGATTCATCTATTCG
TTTAAGGATTCCTTACATATTATGTTGAAACGTTTGATACAATGCTCttt
taaagacaaaagaaattgtatttatttttcagatgAGAAAGGATTGGGTC
TCAGTATCATTGGACTTGGTGTTGGAACACAAAAAGGTTTTGAGAAACTT
GGAATATTTGTCAAGACACTTACAGAAGGAGGTGCATCACAAAAGGATGG
AAGGTTTGTATTCATATCACACCATATTTTTGCCACCAAACCCTTGTTTC
TTAATATAGTTCTATAAAGAAGGTTGTAGTTCGTAGGAGATATTTGCACT
TGCTTTTTGTTTTCACTAATTTAATTTACAAAGAGTCCAACAATCTGTAC
TGACTTTTAAGCCCGCTTTTAAGCCCCTTAATCATTGTGAGTACCTGTCT
GCTCAAACTAttattgtctttttcttttaggaTTCAAGTCAATGATCAAA
TTTTGGAAGTCAATGGTGTTTCTTTGGTTGGTGTCACTCAATATTTTGCT
GCTCAAACTCTCAAAGGTGCCAACGGTATTGTAAGGTAAATAATCACATT
TCAACTTTATTATATAAACATACTATTAAAGGGGAAACTTAGTGGGGAAA
CGGTGACGAAATTTTAAGGCAATTGGCAAAGGCCAACTTTAAGAGGGACG
TGACAAAGATTTTAATAAAAGTAAGGGTAAAAGAAATATATGGCTTGAAA
TCAAGTCAAGTCAGTCTAATGTTTATTACTAGTTTTTTATATCTATAACA
AGTTAACACTTAAGTTTTTAATAATAAATAAGTTGTAATGGTTTTTTTGT
AATTCAAGCatttaaaagaaaacataatATTTCCTCAGGAAACAATAACC
ATGTTGGCTTTAAACACTTAAAAAGTTGTTGCATCCTGCCCATAATGCTA
AGCAACAAAGAAGTTTTAAAATGCTAGCTAACACCTCGCCCCAGCTGTGC
TGCAATTTATATCTTTAAACTCTATGGGACCCTTTGTAAGCATAGATATA
ACTATTGTCATCAATATTTACAAAACTAGTAGTTAAGTGATGCACACCAA
ACATGTTTGTCAACAAAATAATGTGTTACCTTTTATAAATGAAATGCATA
TCTAAATCATGACGAActttaaaatgttatttttatagTGATGATgttaa
atttcaatattttctttttcctttgaCTGGTTTAATCCCAAAAGTAATGT
TTCGAGCAAATAATCTCGTATTATATTAGTGTTTGGGTTGATTTAGACGA
TTTATCACACTACTCTTGAATATGCAATCTGAATTCAAGGGTTTGATGGG
ttttatgtttttgaaattttctctttAGGTTTCTAATGGGACGTGAAAAG
AACAAGCGGACGCAATATGCTCCTGGTGCACCGATGTTGGACAACCCTGA
TATGAAGGTAAGAAATAGCCAACTTAATATTCTTCATGAGCACtattgca
tttttttgaaatagtttGTTGATTCGAAGCTAGAAAATTGATGCTAAGTA
CTCAAAGTTATTTTGCACCATGACACACTTTtgatagttttgaaaatttc
taaaagatGAATTTGTCTAGTGATTGATGTTTTTGGGGAGAGactgaaat
gaaaatttagtaTATTATGATTGATAGTTCGGTGCTTTAAAGACTACTGA
AAGCTTCAGGAGGGTCTTCGATGATTTACCACAAGATTTCCCTCGTTGAC
TTTAATCCgaagatttatgatttattcgAAAAGTTTCTCATACACTTCAT
CATATTTTCTTATCTGGTTCTCACTTTCTTAGAAAACCTATATATTGTGC
TACAGCTTTCTTCATCTCTCAAACTTTCTTCAACGCTTATTTCCTACTCT
TTCTTTCGATGAACTtgaattttgcatttttgttctagacacagatttct
gtaaagcccgaaggacttGATGTCGtgctttttaagcttttcaaagcagg
aaaaaagtgaatatctattgcaaaaatattattgttattgttttcaaaaa
tctgcgaaaaaaacttctgatTGGTCAGGGGTTAAGTGAAagtctattgt
aatgtcacatgACCTAGGTAAGATTTACTACAACGGCACACTTTTCGGCC
AAAGCactctatctagcccttcgggctttacagaaatctgtggttCAAAA
CACCCATTATCAAGAAGTACTGTTGAATAAAATGAGGCTCAGCTTTCAAT
AGAGTTGTAAGTTATAATTGACAGACCAAATAATACTCTGAGTGCATTAT
AAtatcaaaaatctcttttttttgtttgaaatatatTAAAAGATGAGCGA
ACTTACCTCTTTTAGTTTACATTTTAATATCCNttttttttgtttgaaat
atatTAAAAGATGAACGAACTTACCTCTTTTAGTTTACATTTTAATATCC
TTTTTGAGACAAAATACTCATTTTAGAGTAGTTGACTTGCTTGCTTTTAC
CCTGCAATGAGATTGTGTGATTATAGCTTTCGAAGAAATTTGCCAGACTT
GTGGAACTTCTGAATTTCTTAAATATGTGACTTGAAATTTGTTGGTGTTT
GATATAGTTTTTATAGAGAATCTCATTGGAGTTCTGAACTTAAACTAAAC
AGAACAGCTAAACAAATAACTGTAGATAAaccttttcaaaacatttggga
cgacattttttattataattgtTTAAGATGTTATAACATTTTAAGAGAAA
CTTAGTATAAAATGTAGTGTCTACATTAATTGACTAAAGAATGTGTCAAG
AATTTTGGTTGAGTAAAAAATACTGTTCCTATTGCTCTTGTCAAGCCGTT
AAATAAACATTGGTTGTGGATTTTATTATGAAGACTGTTTTATTTTAAGC
TGATATTTTGAGACTATTTCAAGTCAGTTTGAGATGCTAAAAAATCTTGA
TTTGATGGCATTTTAAATGGTAGTTTTGTTCAGTATTAGGGACAttattt
tattaatctttttgaCACAAGATGTGGATTGTACTAGTTGCTAGCTATGG
AAAGGCTAGATATTTTGTGGTAATTCATGTACATTTCTCAACAATATTCT
GTATACTAACCTAAGTGTCCCAATCTATCTCATAAACTGGAAATAACAAA
GATTTTCGAAATTGTATTTTATACACAATTGTATAAAATATTAAAGATAC
TTTCAGTATCTTGATCAATATCTTGATCCGTATCTTGataccatggcgtt
ctaaaccTAGGCCTTATATTTAGAACGGTATGCTTGATACCCTAATTCAC
TAATCTTGATCTAGCCATATCCAGCCATATATCTAGGCTCAGTGTTGTTC
TTGATTGTTCGTATTTTCTAGTGTTCTAAAAACTCTCGTTTttcttatac
acgtttttttataagaatatactttattaGAATagtcatgatgaaattgg
ctaaaaaattaagaatatggtaagaatataaccatcatggaatttggcaa
ctgagCCTCTAAGAATGCCTATTTTCAGAGTATTTTACTATAAAATTGCC
AATCATTCCGCAGCAATGCTAAAAGGTTCCACAAAATGCCAAATTTTCGC
TTGAGGTATGTATAACATGCttgattttagctgggtttgaATCAAAActt
aagaataccgtaagaatatttcaggatgatttttcccaaaaagttaagaa
tattcatgatgaattgaaaaaacgtgtaaaacaaTGCGTGTATGACATTC
TTGGATTGGAATCTAATTATGACGTCCAACACCTTCCTTTTCCAAAACGT
TTACTTACAAATCCCTCGTCATTATCTTCTTCAGAAACACATAGATGAGA
TGAACCAAGCCATGGCACAGGTCGAGGAGTACCAAACAAGAACTCTGGAA
GCGGAACATACACTGGAAGAAGTCAAAATGGAATTGCTGAAGGTAAATTG
ATTATAATTTGagaactttttgagttttaagcctaaaattgttcttaaca
tgttcctatttttgccattttttgagtatttttgtccattttcttaagaa
attgggtgttttagagtccgcgaagccttaaaatgttcttaactttttct
taacattttgaccttCGAAGCCTTTTaatcttatatagtttgctcttata
aaaaaacgtgtatgattatttttattgaaacttCACTTATCATCGCCATT
GTCTAACGAACTAGACAACTGTACAACCTCTAATGCAGAGTTGACACACT
TGCCAGCAGGGTGAAATACTCCTTATGGCTTGATATANTATTTAGAACGG
TATGCTTGATACCCTAATTCACTAATCTTGATCTAGCCATATCCAGCCAT
ATATCTAGGCTCAGTGTTGTTCTTGATTGTGAATATTTTCTAGTGTTTTA
AAAACCCTCGTTTttcttatacacgtttttttataagaatatactttatt
agaatattcatgatgaaattggctaaaaaattaagaatatggtaagaata
tcaccatcatggaatttggcaactgagCCTCTAAGAATGCCTATTTTCAG
AGTATTTTACTATAAAATTGCCAATCATTCCGCAGCAATGCTAAAAGGTT
CCACAAAATGCCAAATTTTCGCTTGAGGTATGTATAACATGCttgatttt
agctgggtttgaATCAAAActtaagaataccgtaagaatatttcaggatg
atttttcccaaaaagttaagaatattcatgatgaattgaaaaaacgtgta
aaacaaTGCGTGTATGACATTCTTGGATTGGAATCTAATTATGACGTCCA
ACACCTTCCTTTTCCAAAACGTTTACTTACAAATCCCTCGTCATTATCTT
CTTCAGAAACACATAGATGAGATGAACCAAGCCATGGCACAGGTCGAGGA
GTACCAAACAAGAACTCTGGAAGCGGAACATACACTGGAAGAAGTCAAAA
TGGAATTGCTGAAGGTAAATTGATTATAATTTGagaactttttgagtttt
aagcctaaaattgttcttaacatgttcctatttttgccattttttgagta
tttttgtccattttcttaagaaattgggtgttttagagtccgcgaagcct
taaaatgttcttaactttttcttaacatTTTGACCTTCGAAGCCTTTTAA
TCTTATatagtttgctcttataaaaaaacgtgtatgattatttttattga
aacttCACTTATCATCGCCATTGTCTAACGAACTAGACAACTGTACAACC
TCTAATGCAGAGTTGACACACTTGCCAGCAGGGTGAAATACTCCTTATGG
CTTGATATATAGATTAATTCTTTAAGAAAGTTTTTCCAAAGaagttaaaa
ttaaaatcaaaagaaaatcaaaatgttcCGATTACCTTATCTAGCAGACA
CACAGTATTGTTTAGCTTTCAAAtttagcgaccgtagtgcagtggtagag
catccggctacggtgcgcaaggttgtgggttcaacccccagctgggtcat
accaaagattcataaaatggtacttgatgtctctctgCTTGATAATCAGC
AATTAAGACAAGGATCAGGGGTAAATGGAGCAAtctagggagaaagagtg
gcgccctcccctacctacGGGTgcatagctatcgaaagaggagctgACTG
CGGTCGCAGTCTTACTTAGCTTTCAAATTACGTCATTAACGGGCATTGTT
GTGTGCCCGGTTGGGAAGTATTCTATTTCGAAAAGAGTGTAACTGAACTC
AAAGGGACTATTTGTTTTGGTAAAAATGATTGCTTACGCATGGTTAAGGT
GGTTTTACACCTCAAAAGAATGTGCTGAAacaattattttctttgaattg
gTAATATGTGTAgtgaaatattaaaaaaatttcatatgtGTTTCTTCAAT
TTGTATGTCCGCAAAACAGGGTAATTTTTTCGAACGTGATccattctttt
ataagaacacaatatATAAGAACTTGactcgatggccaaaatattaagaa
caagttaagaacattttaaagtcCATGAACTCCAAAACACCCAATATCAT
AGGAAATTGCACAACCATACTAGCAAAATGCTAACAATacttttaagctt
aaaactcagaTAAGAGCATACGATGGCTTCATAAATttaggatattctta
taaagaaaacgtgtataggTGAttttaatatgaaaatgcttatGACAGca
ctttttaatttatttgacaTCATGCTCTCATTTGATCTATCTCGAAAGTA
GGAAGtgaaaggaattttttttaaacctgaTAATTAACCTATTTTTATGT
TTCCAAAGGGAAAGaataattctattgtttataacTCTTTTAATTACAAA
TTTAGTACAAAATACTTGATATAGGGACAAACTTATGTAGATAGCACTAC
ATATCATATTTTTGACCCAATCAGAAGCTAACCAACTCATAGTATGAGAA
TCATGAAGGTTAAGGTAAAACTTAAGTAAATAGAAATTTGCTTTTATTTT
CCAGATATTTGGTTTGCAGATATAAACTATCGAACATATATTTTTATAAC
TTTTCAGGCTGAAGAAAGAGCGCATGATGCTGAATACAATTTGAGCGAAA
CGAAAGAAATGCTGAAAGCAGCCACAGAGGTATGTTTCTTAACGTCACTT
CGTCACTCTTCTTTAGAGAAAGCAATAAttgcgagtttatgtatttgcac
ttttgaggacggtaaagtgactgaagcgatttggaatagccCGCAGTtat
gacccgcaaaatcgaggacggtaaaaaaaagtgctgatttaccgtcgtcc
ttagtcagtcaggatgtagacaaattagaaccCTACCTTCTCCTTCACAC
TACAGAAACCTGTTAATAGGAAGGCTGAAAGCACTGGTTTAACCTTTCTT
TGCTTTCGGCAGCTAGAGTGGAGAAAGTTTTTTCTTCAATTAGCCATCCC
GTCTGTCCTTTTTTTCTATCTCTATTCCCTAAAAAGAAGGGTCGGCATCA
GTAAAAGTGGGACAGCAGACCAAATTAGCAGACCAGTATTTTAGatatta
tctttaaataatACAGTTTAGATTTGTTAGAAATTGTGGtgatagatatg
ccctccgatgcatcggaatgggtcctacccacggtggagtaggaatcaca
gcgcaagcagacattgcaaccctgcagatgcaAGCTGCCGANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGAaggagcattcacttgccaagtgaatcgtagtgccacggtgggtatc
gaactcgagcctcctggacagaagtcaagcacgataaccactacaccact
ACGCCTTGTGGAAGTTTTAGTATATTAAAAGCTAGCATGCGGAAATGATT
TGTATGAAATATTCTCAGTACTAACAAGACATTACCTTGTAGTATTTAGT
ATCTTGTGGTTAGGTAGCTCAGTACAGCTCagtagattgggtaatctgat
ctaggcggtaagtcaCTGGGAGCTTGGAATAGATGACGCGCTGTATCTCA
GCATTCGACCTCCCAGGTCTAGTGCAAATAAGAAAGGGATAGACTCCCTT
ACTCCCGGCTCCGAAAACACCCACCAGATGAATAAACTTACTATTTAGTA
TCTTACAGTTAGAAGATTTTGAGCGGAACTTTAATATGTATGTGTTAATG
AATGGGGAAGATATGATTAGATAATTTTCTTAGAAAGACTTTATTTTATA
CCTTTTATTACTACAGTTTTTGAGTTCTTAACCGGCAAATTAAGACTATA
ACAGACCTTGTAACATTATGAACTGACACGAGTAATTTGATATTTCATTC
ATCTAACATTTTTCACTCATTCAACCTTTTTCCTTTCCATTTTCTTCCCA
TAGTCACCTTTCGTTAACAGTCAgagaaagttgaaaaatgaaataaagaa
gGTACTCGTTTTCATCTTTTTCGTTTCTTTTCGTTGAAAAACACCTTATT
TACTTTGAAGCATcaaatacaagtttttttataatataacTTCGAAACAC
TCACTATTATTGATAAATCCAACTTACGTTCTAATACTCAAGCATCTTTT
AAACGTTCTAGCTTAATCATTTGCACGATAAACACTTTACGCACGCTCAC
TCGCACTAATGCACATTGATATAGCACAATGACGCACTATTTAGAAGGAT
TCTAGGTTTAGCTATAAACTATTAGTCCAAGAATTATGCTACTCGAAAAC
ACCGTTGTACcagaaaaataacaatttgATTCTTCTTGAGCAAATATTTT
CGACACGCTTTTTAGGGCAGCAAACGAAGTGGAGACAAAGTGGATGATTT
GCAACGTTCATTGAAAGAGATGACGAACAGACTGAGCACTTCAGAAGAAA
ACCTTCTAGATCTCACGTCCAAGTTTGATGTCAAAGACAAAGAACTCTTA
GAGGTTAGGAAACTCTTTTAAGGGAATTAGACCCCTTTTGAAATTCGGGA
TCAACACGACCACGAGGCCTTCTTTTTCTATCAAGATAGTCTGTACTTCT
gttcttttgtattttcaaaggaagaattCGACCCTATTACAGTGAATTAC
AGTAATTTTTAGTGTGGTATTGCTATATAACTAAGGGGGTTAGGTCCCTT
CCCGCATTTTATAGATAACAATTGTCCCAACGTGATGGTTAAATTTACAT
CCAAACTATAGTTTTTTACggaagtttgaaaattatattcttAAGTCTTT
TGAATGTGAACTTTGTAATTGTTGGGCTCATAGGATTTTTTGAAGGAGCc
gacgcaaattttttttccgtagacgggcggaaatatctttaatggtcgga
atatcatttgatggtcgagAATATTATTTGACGGTGGGAAATAttcaaaa
ctctaaaaatttgaaaatttaatggtcggaaagatctcgcgcttttaaaa
atgcttcatcagcaaaaaaatgtaaacaaagatggtagcaaaggtgATGT
TGGGTGTTGTGgaagccaaattttcaaattttaagagttttggatatttc
cgaccatcaaaagatatttccgaccatcaaatgatatttccgaccattac
gctatgatatttccgaccatcaaatgatatttccgaccattacgctatga
tatttccgaccattaaagatatttccgcccgtctacgggaaaaaaatttg
cggagcCGACTTCACCCTATTGCTAAGTTTTAAAAgcgtttgaaaataaa
tatttcagattaaaaaaaacttcaggGGTTCCTTTAATAGACGCAAGagc
tgactgaaatttgatgGGCTACAATGTTTAATGTTTTATTCAGACTAATT
TGTATCCATCTATAAACCGATTATAATCCTTAAATTAGCTTGATTTCCTC
TCTTGTGACATTTTAATTCATTTCATGGACATATTATCCCGGCTTAAAGT
CTAAGAATAGAAGAATTTGAAGAATCAATTAAAAGCCTGTGAAACATTGT
CATTGTCTCACCGGGCTCATGTAGAAAAAAGATCCTGGCATAGTATACAC
AACTACAGtatcataaatttttttctggagtTTTCTTGTTATATTGTAAT
TGTAATGGTTGTTCAATATGAGGTACTTACGATTTTTGTGACGAGTTCCA
ACGCCTGGATGTAAATTAAACAAAATGAACTACAAGATCCCCTGAATATT
GTCTATGAATGCAAAGCTCAGAATCTTGGTCAATAATTTATTAATTGCTC
TTCTTTGGGGATGTTAGGTGCTGGAAAGCTCTCAATACTAAGTCTGGTAG
AATATTATCTTTAGCTGTTTATTTTTAAGCCGGGTCTCACTGAAATCNAA
CGACTCTATATACTGGCAAAAGATTCGAGCGCTTTATAAAAAACAGGTTT
GTGAAATTAAcgaattttgttttatttacatttttttagttcCAAGAGAT
GCTTGAAGCAAAACATGAAGAAGAACGCCAACTGTCGGAACAAAACCAAT
CCATCTCTCAAGAGCTTGGTAACAAATCGAAAGAATTGGAAGCCTTGGAA
CAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036844XLOC_036844Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058476-exon-scaffold_311-1491911889:993266..996114TCONS_00058476-exon-scaffold_311-1491911889:993266..996114Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:993266..996114TCONS_00058476-exon-scaffold_311-1510915933:993266..996114Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:993266..996114TCONS_00058476-exon-scaffold_311-1575043694:993266..996114Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:996310..996472TCONS_00058476-exon-scaffold_311-1491911889:996310..996472Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:996310..996472TCONS_00058476-exon-scaffold_311-1510915933:996310..996472Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:996310..996472TCONS_00058476-exon-scaffold_311-1575043694:996310..996472Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:998298..998418TCONS_00058476-exon-scaffold_311-1491911889:998298..998418Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:998298..998418TCONS_00058476-exon-scaffold_311-1510915933:998298..998418Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:998298..998418TCONS_00058476-exon-scaffold_311-1575043694:998298..998418Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:998646..998750TCONS_00058476-exon-scaffold_311-1491911889:998646..998750Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:998646..998750TCONS_00058476-exon-scaffold_311-1510915933:998646..998750Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:998646..998750TCONS_00058476-exon-scaffold_311-1575043694:998646..998750Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:999544..999622TCONS_00058476-exon-scaffold_311-1491911889:999544..999622Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:999544..999622TCONS_00058476-exon-scaffold_311-1510915933:999544..999622Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:999544..999622TCONS_00058476-exon-scaffold_311-1575043694:999544..999622Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:1002000..1002072TCONS_00058476-exon-scaffold_311-1491911889:1002000..1002072Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:1002000..1002072TCONS_00058476-exon-scaffold_311-1510915933:1002000..1002072Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:1002000..1002072TCONS_00058476-exon-scaffold_311-1575043694:1002000..1002072Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:1003095..1003129TCONS_00058476-exon-scaffold_311-1491911889:1003095..1003129Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:1003095..1003129TCONS_00058476-exon-scaffold_311-1510915933:1003095..1003129Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:1003095..1003129TCONS_00058476-exon-scaffold_311-1575043694:1003095..1003129Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:1004723..1004794TCONS_00058476-exon-scaffold_311-1491911889:1004723..1004794Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:1004723..1004794TCONS_00058476-exon-scaffold_311-1510915933:1004723..1004794Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:1004723..1004794TCONS_00058476-exon-scaffold_311-1575043694:1004723..1004794Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:1006619..1006666TCONS_00058476-exon-scaffold_311-1491911889:1006619..1006666Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:1006619..1006666TCONS_00058476-exon-scaffold_311-1510915933:1006619..1006666Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:1006619..1006666TCONS_00058476-exon-scaffold_311-1575043694:1006619..1006666Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:1007031..1007168TCONS_00058476-exon-scaffold_311-1491911889:1007031..1007168Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:1007031..1007168TCONS_00058476-exon-scaffold_311-1510915933:1007031..1007168Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:1007031..1007168TCONS_00058476-exon-scaffold_311-1575043694:1007031..1007168Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1491911889:1008655..1008770TCONS_00058476-exon-scaffold_311-1491911889:1008655..1008770Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1510915933:1008655..1008770TCONS_00058476-exon-scaffold_311-1510915933:1008655..1008770Clytia hemisphaericaexon
TCONS_00058476-exon-scaffold_311-1575043694:1008655..1008770TCONS_00058476-exon-scaffold_311-1575043694:1008655..1008770Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:993266..1008770 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00139547	0	0.207294	0	1.52449e-10	8.57729e-09	0	1.55962e-10	4.9817e-08	1.1531e-07	1.62768e-06	5.13001e-09	0	4.61219e-10	0	0	0	2.80738e-09	0	4.84562e-07	4.15676e-10	1.00671e-06	4.63923e-09	0	0	0	1.86501e-05	2.17522e-05	5.85519e-06	0.000980311
Blast
[Close]
BLAST of TCONS_00058476 vs. Swiss-Prot (Human)
Match: NEB1 (Neurabin-1 OS=Homo sapiens GN=PPP1R9A PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 3.024e-37
Identity = 82/127 (64.57%), Postives = 104/127 (81.89%), Query Frame = 3 
Query: 2880 VVYTYGPIEYDRANADIDPLTSSAEWELEKRVDSMDIFSVDLHKDEKXXXXXXXXXXXXTQKGFEKLGIFVKTLTEGGASQKDGRIQVNDQILEVNGVSLVGVTQYFAAQTLKGANGIVRFLMGREK 3260
            V  TY   +YDR N ++DP+ +SAE+ELEKRV+ +++F V+L KDE GLG+SIIG+GVG   G EKLGIFVKT+TEGGA+Q+DGRIQVNDQI+EV+G+SLVGVTQ FAA  L+   G VRF++GREK
Sbjct:  466 VFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREK 592
The following BLAST results are available for this feature:
BLAST of TCONS_00058476 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEB13.024e-3764.57Neurabin-1 OS=Homo sapiens GN=PPP1R9A PE=1 SV=2[more]
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