TCONS_00058642 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058642
Unique NameTCONS_00058642
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1507

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058642 ID=TCONS_00058642|Name=TCONS_00058642|organism=Clytia hemisphaerica|type=transcript|length=1507bp
CTACATCGTGAAGACAAAGAAGAAGTAAGAGTTAATACAGATGGGCAATT
TGAAGAACTCCCAGAACCCGAAGAGAAGATTCAAAGTACGAAAGAGACAT
ATGATCGTTTCGATAAATTTGAAAAGGCAGAAAAGAAGCAACCAACTTCG
CCAACCAAACAAAGTTCGCCCTCCAAAAGAACTAATCCTGTCACTAAAAC
TATGGAAAATAAAGACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAAGA
CTTTCTTGAACGAATGGATTGAAGGCTACACAATAGGAGATTCCGCTACA
AAACGTTCTAATACcaattcaaccaatcaaattaatACAAATCAGCCACG
TGATGAGAAAGAATTCCAAGCAAAAGTGATGAATTTCTTATCCAAGAATC
CTGATTGGTCGAACGAAGCAACTTTGTCTGAAAACtttcaagagaaaatg
aaagtgaagagcAATAACCAAGAAAAACCATACATGCCTCCTGTCGATTG
GAAATCACAAGCTCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTGGTTT
CTAGTTTGGAGAAATTACAAGACATTCTCGAGTTGTCAAAGTCTGATTTG
GTGCAACTTGATTTCTTCAGCTTTCTGGATAAACTAAAATACACACGAga
aaatattgttttgaaaacgaaagagtGGATCATTGTCTCTATTGGTTTAT
TACTTATCTATTCTCAAGGATGTCCAgaaatttccaaatcttttgatAAG
AATGTGACTCATTTGAAACGATTCTTAACAGACAAGTCTCTACCGGACct
tcaatcaatcaaaaacatATGTCCTTCCATAGCTACTAAAAAGACTGAGA
GTGACAATATTGAGGAGAATATTATTAACGTTAGCGAGGATATTGATTCC
GATGATGATAGTATCTCAGATGAAGATGCTTATGGAGATAATATCTTTCC
TCCAGACTCGAACACAGCAACTACGAATTATGAATGTGACTTATCGACTA
TTTGTGAATATGGAGGTGAATTTGAAGAATTGGATTAATTATGATAACGA
TTAGAGGCTGAGCACATCCCcgaaattcattttgatttacagggtgtccg
gaaaaaaaagtatcgagttcgaacatgattctgagtagaaggttgttgcg
tgtgtttaaagGGAcgttaaagtagtaaaatgtaaacattgcgtgaacca
tgtgtcattaaaaagaacaattaaaatcacgtgcccaaaacaaacttgta
aaacaattgaacaatcaaaattagccatattttattttttattttgacat
atgacatttgttttgattttgtatccactgcatacagtttgtttacaaat
ttcgcaagtactgttatgtccctttaacaaaatgtaagaaaatatataca
aacGGCAACATAATCAgacacaataattgtttttacaacagtcattatga
ttatgataaaaaagaattaactttctttgcaattttcatgacgttagagt
aattgag
Run BLAST on NCBI

protein sequence of TCONS_00058642-protein

>TCONS_00058642-protein ID=TCONS_00058642-protein|Name=TCONS_00058642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
LHREDKEEVRVNTDGQFEELPEPEEKIQSTKETYDRFDKFEKAEKKQPTS
PTKQSSPSKRTNPVTKTMENKDLEMLASLEKAKTFLNEWIEGYTIGDSAT
KRSNTNSTNQINTNQPRDEKEFQAKVMNFLSKNPDWSNEATLSENFQEKM
KVKSNNQEKPYMPPVDWKSQALLRKRIVKEKVVSSLEKLQDILELSKSDL
VQLDFFSFLDKLKYTRENIVLKTKEWIIVSIGLLLIYSQGCPEISKSFDK
NVTHLKRFLTDKSLPDLQSIKNICPSIATKKTESDNIEENIINVSEDIDS
DDDSISDEDAYGDNIFPPDSNTATTNYECDLSTICEYGGEFEELD
Run BLAST on NCBI

transcript from alignment at scaffold_312:1041..10965+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058642 ID=TCONS_00058642|Name=TCONS_00058642|organism=Clytia hemisphaerica|type=transcript|length=9925bp|location=Sequence derived from alignment at scaffold_312:1041..10965+ (Clytia hemisphaerica)
CTACATCGTGAAGACAAAGAAGAAGTAAGGTATGTGTTATTATATACGAT
TTAACAAGCATAAAAAGACGCAATCATTCTTTCGACAAATCAGCCTTCAG
GAATAAAATCCAGCCGAATTGATTTATCCGATCAGCTAGTACGTGGTTTC
GGCCGAAATTGCATTCTGGTCCGTAAAATACCAATCAGACAGTTGGCCGA
ACCAAAATTTTGCTTATCATCTCCTCATCTTCAATGATCAATATCTTAAA
TATATAAGATCGAAGAAAACTTGCGGCAGTATTTCCAAGAGCGATTGTAT
CACGTCCATCcgtaaaaaatattgttgcagGTGGCTCTGGTTACGAGATT
Gagataactcggaaagctaaaggaagcaaaattttccgagttaaaaatga
aaaataactcggaaagttaaaggaagcaaaatttTCCGAGTTTAAAAAAA
CGATGAATAACTTgaaaagctaaaggaagcaaaataaactgAGTTAagaa
atgacgtcactaaattccgaaaatgacgtcataactcgagataactcgtt
tttttcgtaactcggaaaaaataactcgggaatttcgGGATTCGTGCCCG
AACGGCTAACCAGTCTCAGTAAATTCATCAAAACGGACTTTCATTTTTAG
AGTTAATACAGATGGGCAATTTGAAGAACTCCCAGAACCCGAAGAGAAGA
TGTAAGTAAAGAATGTTTTGTCTTATGCTatcgggtgtgccacaaaaaag
ttaccctctttgatttgatattgcaggcagtagcagaaagatttttcaaa
gattattttgaggaaagcctaacttaaaatttggtgtattactttttaat
tttacttcattagttcaaaaattatgttcaaaaacctaaaatgttgattt
tagaaaatgtcaaaaaaggctaaaaacaagGGTATCAATTTATGAGAGAA
ACGTTTTTACCAAAACCTTAAAGCACAATGTCTTGCTCCTTGTAACACTC
TCTATGCTTtcttttctattgtctttttttacttctgTTTTTCCCTTGCG
CATAAACAAGATGCCTCCGAATGTTTCAAAcctcacaaaattttcaacat
cttccCAAGAGTTTCCAAAGGTTTTTATGTGTGTGCATCATCGTTGAGAA
AGGTGGAGAAggtgaaagttttgagaaaaatgcttCGTTTGAACCGTTGC
AGCTCATCTCGATTCACAGATGATGGAATGTATTTACAGTAATGCATTAT
CTTGTGAACAAGTGCTTTTTTCATAATGGAAATACATTTATTACAATCAA
TTTAATACTCaggtttttcacctttttctgtcattttttaaaattgatat
tttaggtttttgaacatgACTTTTGAactaatgaagtaaaattaaaaagt
gataCACctaattttaagttaggctttcctctaAATGATTCCGAAATAAT
CTTTGAAAGATCTCTTTTCTATTGCctgcaatatcaaatcaaagcgggta
acttatttgtggcacacccggtaagTAATTTGGGTTGGGTTGATTTAGTC
GTCAAACACTATTTTCGTTGCAAAATGGTACCATTATGGATCAGTCACAT
TCCTAAGCCAAACAGGTTGCGCTGTGTTGGCTTCACCACAAGTAAAGTAA
GACTTCTATTACAACTACTGTAACTATAGAAATCCTTCTCTTGGGCCAAA
GTATTACCCAATGAAGCTTTTCAGTTACTGAAAATACTAATCGCTGtgac
tgattgattgattgattgattgattgattcattgattcattgattgattg
attgattgattgattgattaaacCATTAATCCATTGAAAAAGGTTCATTA
ACTTTCAAGCTCTGATTTCAAAATGTATAATGGGATGTAATTGAGCAGTG
TATATTCGCGGTACGAGACTGCAAAGTCACAGTTTTTCAATTAATTCTCA
TGCTCAGCACCAAAGTTTTTGGccaaattctttttcattttcctacaGTT
TCTCCATATTTTTTTGGTGAGAATTCGCGGGAACGACATAACGACGGCAC
ACACCTTATCTTATATTCCGATGGTGGTTGATCCGCCCACGCTTAAGCTT
tataaaggagcgggccaattttcCATCAGAAAGGATtaatagtcggcctt
tgatgtgttgcatccccagtcgggttcaaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctatttgtg
ttttgaatgattttttaatggtcacgttcacgtagatatcaattatgtat
gtgttaaatgcataaccaggtaggtccataaaagtatcacttgttcgtTT
GCAATTTATCTTTCAGTCAAAGTACGAAAGAGACATATGATCGTTTCGAT
AAATTTGAAAAGGCAGAAAAGAAGCAACCAACTTCGCCAACCAAACAAAG
TTCGCCCTCCAAAAGAACTAATCCTGTCACTAAAACTATGGAAAATAAAG
ACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAAGACTTTCTTGAACGAA
TGGATTGAAGGCTACACAATAGGAGATTCCGCTACAAAACGTTCTAATAC
caattcaaccaatcaaattaatACAAATCAGCCACGTGATGAGAAAGAAT
TCCAAGCAAAAGTGATGAATTTCTTATCCAAGAATCCTGATTGGTCGAAC
GAAGCAACTTTGTCTGAAAACtttcaagagaaaatgaaagtgaagagcAA
TAACCAAGTAGGTTTTATCTTTTTGTCTCTTTTGGAGCTGAGctctactt
taggcgtacaaactttcgcgaccagaaactttcgcgatttacGCTAATGT
TGGcccttttctttgaaaattcttaacagggcaattcacgaaagtttatg
ctcgcgaaaaaatctcagaaaaattagaattctataaattaatttttctt
atcTTCTGATCCCTTTTTAACAATCATCTATATcggatttaaggaatatt
ttcacttttaaagcaatttttattcaaaaattctcatttttatccaacga
tttgcgaaagtttatgcttgcgaaaaatgttttgcgatttttttacctcg
cgaaagtttctgcttgcgaaagtttgtacgcctaaagtactctTTGGATT
TATTACTTTGGCGTACTTCCTATTAGAAAGAGCCTggataatatttttca
ataagtTTTAAATTACATTTGGGGTATTAGAGCCAGCCGAAACACGCTTT
GCAAATAGAGTCCTAAAACACACGACATATTAAGTAGTTCAACTCTTAAA
CAAAATCTGATGTAAAAATGTCTCTTTGGCAAATCAAAATTGATACAAGA
CAAAAGAGgaaattttcagatttctttaaagatctttGTTTGAGTGTGAT
TACATTTCAATTATTAGGAAAAACCATACATGCCTCCTGTCGATTGGAAA
TCACAAGCTCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTGGTTTCTAG
GTAATTTCTTCATTAATTATACGGCTGATTACACTTAGCTTAGAAATATA
AGGGAGGAGCGGGGTGATTAATCCGTAATAGCCCTGCTGTAATCACCCCG
TGAANccttattggtatatattttcgcatgttacaaattttccaaatttt
cgcgaatcgcgaaattttttcgaaaaaacgtgtttcgcgtatattaaatt
tcgcgattgccgacttctggaaaattttcgcgtgtattaaatttcacgat
tcactaaactaggtattttcagaaagtgggaatataaagcaagaaaaaga
ctgatttgcttgaaacacaacgtttttgatgtaaaaatactaacaaaata
ctaagaaaaaatttttcgcgtgtatttaatttcgcgattttgtaattttg
aaaaNaaaatactaacaaaatactaagaaaaaatttttcgcgtgtattta
atttcgcgattttttaattttgaaaaatttaaacagtattaaatttcgcg
aaaattgaccaaaaaactcgcgaaactaagtacccgcgaaaatttgtaac
acgcgaaaatatataccaataaggtatatgGCTGATTACACTTAGCTTAG
AAATATAAGGGAGGAGCGGGGTGATTAATCCGTAATAGCCCTGCTGTAAT
CACCCCGTGAAGAAAAACCTTAcgcctttttttcaaaaaactaatCGGTT
TCATATCATAGTTGTGTAATCCGNTACgcctttttttcaaaacactAATC
GGTTTCATATCATAGTTGTGTAATCCGACTAGgttcgggctattttgaaa
tgttttcaataaaCCTCGGGACTATTATTCCCAAATAGCCCTCCAAACCA
TCCTATTACTAGTTAGtgcataggccatttcacagtcgcaaagcgtaatg
ggtaatcaggaccactgcgcgctaataacgacttattattggtccaaagt
tttgaaaaaaattgaagatttttgcgtctagccaacgggaagccgtaatg
gaggcgcaatcagtcctgattacccatgatccatttcgaccgtgaaatgg
cctatattAAATCATTGAACTCGTTCCATCTTTGATATGCACCACTGTAT
AGAATTGACTTCACCAATTTATGTAATTAGTCTTTGAACCCAATACGTTA
CTTGCAGCAATTCAGGTGTCGTAAAAGTGACGCAATGACAGAAGATATTA
CGGGATCATTGAAACTCtggattttacattttttagcTCGCtactatttt
cttttcttttacccCTCTCCAGGATTTTGCAGTTCGGTTGATAGTCTATA
CCACTGTCTCTATTTCAGTTTGGAGAAATTACAAGACATTCTCGAGTTGT
CAAAGTCTGATTTGGTGCAACTTGATTTCTTCAGCTTTCTGGATAAACTA
AAGTGAGTTTGCAACTTTTCTATAGATTTATTTTCATCTGTTTCTAATCC
CACTAAATCATTTGAGCCAAAACTTTAAGCAATCAGTCCGTCGCAGGTCT
TCAACAATGGCATGTCTTCACTTGCGCTCCGTAGTAGTCTTTTGGAACTA
TCGCAGCATCGATCACGCATTCAATCTGCAGGTATTTGGCCGTTAacgta
ggtcttcggccgctggaaaACCGCGACTTAAAGTCTTGAAGGTCTTCGGC
CGTTggtgtaggtcttcggccgttgacggaaaaaaaaattgctcCGTCAG
AGTATAGATTATAGCCTGTATTACCCCgatttctgaattttgaaaaacgt
ctCTTCTCCACGAAGAAAAGTTTGATACAAGCTTTTGACTTTTGGTCTTA
TTATCATTTAGCCTTATTGGTTGACTCAAATCCGCGAATCTGGCCCGCTC
TCCCTGAAATTTTATTTGTATCACGGATTTTGCatgcaccttttcgaccg
tagccgccaattgccgcgcgggcatttttttgtccgttttatcaccctaa
aaccgtcccagtcttttttcgcacctatagacaatagaaaaaggtgtaaa
aaaggattgggtcgagtttagggtggtaaaacgggcAAAAAATACCTACG
CAGCTACgatcaaaaatttatttgtgCAATGGATAAAGCTTTATTTATTG
GTTTTAATTATAGATACACACGAgaaaatattgttttgaaaacgaaagag
tGGATCATTGTCTCTATTGGTTTATTACTTATGTAAGTAAAAGTTAatat
ttttatgagaacataaggctttgagacaaaaaatatttaagtcTATCTTA
AATGTACGTGGACACTTTACTTTTCTAACAATTTCTCGGTATGCATTTTT
GTACTATATTAAATaaacaccgttggaaagatatcacCAAGGAGAACGAT
CAAAAGATTAAAACAATTTGAACTAGTAGAAAAATCTTCttattggacct
accgggaggtcctttaatttgaccgttgtccgttcgtctgttacaagctt
ttctcgggattggctcattagtttttttttattttttgcacaatgataca
aaatagcaatgcctgaaaagtgacggagcccgatttttgaaaaaaaattt
tggggggcaaatttgggccaaaaactacctaaaaataaggttttttggac
ttggtgcaaaattgcctcattagtttttcctgatttttggcagaaagata
gagtgcaaggtaccctaaaatgtggctgaagtaatttttctcgcaaaatt
ttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaagctacc
taaaaataaggtttttttgacttggtgcaaaattgcttcattagtttttc
ctgatttttggcagaaagatagagtgcaaggtatcctaaaatgtggctga
agtaatttttctcgcaaaattttttttcgtcgtcaaatacggattttcgc
aaatttgggccaaaagctacctaaaaataaggtttttttgacttggtgca
aaattgcttcattagttttttctgatttttggcagaaagatagagtgcaa
ggtaccctaaaatgtggctgaagtaatttttctcggaaaattttttttcg
tcgtcaaatacggattttcgcaaatttggggaaattcccttttaccattt
tcctgttagcagcttttctcgggattggctcattagtttttttttaattt
tttgcacaatgatacaaattaataatgcctaaaaagtgacggagcccgat
ttttgaaaaaaaaaattggggggcaaatttgggccaaaaactacctaaaa
ataaggttttttggacttggtgcaaaattgcttcattagtttttcctgat
ttttggcagaaagatagagtgcaaggtaccctaaaatgtggctgaagtga
TTTTTCTcgggaaatttttttccgtcgtaaaatacggattttcgcaaatt
tgggccaaaatgtgcctaaaaatggggttttctggactttgtgtgaaatt
gcttcattagctttttcaaattttttggacaaagataaaaggcaaggttc
tctaaaacaCGACTGAAGCctttttttccggaaaattttctttggccAAA
AAActtggattttcttatttggggaaattcccttatgtcatttttaggga
aaaagaacatttctcgcgattggatcgatattcttttctgattttttgca
ctttgatgtaaaatggtaatcttTAAAACTGAtgaagcctgattttcaaa
aaataattttttggggcaaattttggccaaaatgtgcctaaaaatggggt
tttctggactttgtgtgaaattgcttcattagttttttcaaattttttgg
actAAGATGAAAGGCAAGTATCTCTAAAACGTAACTCAAGCTGTTTTttc
cggaaaaatttttttggctgtaataatcggattttcttatttggggaaac
tcccttttgtcatatttagggaaaatgagcggAAAAGTGCCTatattcaa
gctgctcattacactttcttactctcttgctatttgtcctatttttatct
gattttggtcaccaggtaggtccgttcagcatgttgcttgttttcatatt
tttatctttacttttcaatttttcaagaatcttttatctttatattatat
actcatcgaaatgtttaaaaaaagtaaagtgtccacatacttttgagata
GACTTTAGAACATAATGCTTTTAGATATCcaaatcgcacgatgggttatt
ttttcttatttggcgcatcctgtagagagcaattaatcattaatcacact
cttcgatgccgcgccaatgtttacaaaattgattttaatgttttttctta
catttttttttcatcgaacgttttaattgcattcgagattcattttgaga
gaaagaaaatctataaacaacgataaaagaaaaacatagagAGAAGCAAA
AAATACATAGAGAGAAGCAAAAAAATACGACTTTCAGTggaatttacttt
cctaacggggaaaaagtagtgcgattagctcgtaatcacataataactcg
tacaattcgaaaattgcactcgttatcatgtgattaaattaaaccaataa
aaacattttaggcctaaatttaaaaaaaggctTAGAACATTCAAACTTTG
AATACTCTTCTTCAAACTGAATACCTTTAGTAATGGCACATATGGACTTG
AGAAATCAGGCTCGTCTCAATTTATGTTTCGGAAATTGGAAACGGAACAA
ACAGAGTGATGAGGAAGTATTAATAGCGatttgtttcttaaaatataTTG
CACTGCTAAATgtattctgatttttttttgaagcgaAGAGCAGAAAAAAG
TTTTCTCTGACGTTTGAGCTTTCGAGACTGGAAAGCATTCTACTTTTTTG
ACAATTTATTCTCCTTTATTTTAAGCTATTCTCAAGGATGTCCAgaaatt
tccaaatcttttgatAAGAATGTGACTCATTTGAAACGATTCTTAACAGA
CAAGTCTCTACCGGACcttcaatcaatcaaaaacatATGTCCTTCCATAG
CTACTAAAAAGACTGAGAGTGACAATATTGAGGAGAATATTATTAACGTT
AGCGAGGATATTGATTCCGATGATGATAGTATCTCAGATGAAGATGCTTA
TGGAGATAATATCTTTCCTCCAGACTCGAACACAGCAACTACGAATTATG
AATGTGACTTATCGACTATTTGTGAATATGGAGGTGAATTTGAAGAATTG
GATTAATTATGATAACGATTAGAGGCTGAGCACATCCCcgaaattcattt
tgatttacagggtgtccggaaaaaaaagtatcgagttcgaacatgattct
gagtagaaggttgttgcgtgtgtttaaagGGAcgttaaagtagtaaaatg
taaacattgcgtgaaccatgtgtcattaaaaagaacaattaaaatcacgt
gcccaaaacaaacttgtaaaacaattgaacaatcaaaattagccatattt
tattttttattttgacatatgacatttgttttgattttgtatccactgca
tacagtttgtttacaaatttcgcaagtactgttatgtccctttaacaaaa
tgtaagaaaatatatacaaacGGCAACATAATCAgacacaataattgttt
ttacaacagtcattatgattatgataaaaaagaattaactttctttgcaa
ttttcatgacgttagagtaattgag

Coding sequence (CDS) from alignment at scaffold_312:1041..10965+

>TCONS_00058642 ID=TCONS_00058642|Name=TCONS_00058642|organism=Clytia hemisphaerica|type=CDS|length=7266bp|location=Sequence derived from alignment at scaffold_312:1041..10965+ (Clytia hemisphaerica)
CTACATCGTGAAGACAAAGAAGAAGTAAGAGTTAATACAGATGGGCAATT
TGAAGAACTCCCAGAACCCGAAGAGAAGATTCAAAGTACGAAAGAGACAT
ATGATCGTTTCGATAAATTTGAAAAGGCAGAAAAGAAGCAACCAACTTCG
CCAACCAAACAAAGTTCGCCCTCCAAAAGAACTAATCCTGTCACTAAAAC
TATGGAAAATAAAGACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAAGA
CTTTCTTGAACGAATGGATTGAAGGCTACACAATAGGAGATTCCGCTACA
AAACGTTCTAATACcaattcaaccaatcaaattaatACAAATCAGCCACG
TGATGAGAAAGAATTCCAAGCAAAAGTGATGAATTTCTTATCCAAGAATC
CTGATTGGTCGAACGAAGCAACTTTGTCTGAAAACtttcaagagaaaatg
aaagtgaagagcAATAACCAAGAAAAACCATACATGCCTCCTGTCGATTG
GAAATCACAAGCTCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTGGTTT
CTAGTTTGGAGAAATTACAAGACATTCTCGAGTTGTCAAAGTCTGATTTG
GTGCAACTTGATTTCTTCAGCTTTCTGGATAAACTAAAATACACACGAga
aaatattgttttgaaaacgaaagagtGGATCATTGTCTCTATTGGTTTAT
TACTTATCTATTCTCAAGGATGTCCAgaaatttccaaatcttttgatAAG
AATGTGACTCATTTGAAACGATTCTTAACAGACAAGTCTCTACCGGACct
tcaatcaatcaaaaacatATGTCCTTCCATAGCTACTAAAAAGACTGAGA
GTGACAATATTGAGGAGAATATTATTAACGTTAGCGAGGATATTGATTCC
GATGATGATAGTATCTCAGATGAAGATGCTTATGGAGATAATATCTTTCC
TCCAGACTCGAACACAGCAACTACGAATTATGAATGTGACTTATCGACTA
TTTGTGAATATGGAGGTGAATTTGAAGAATTGGATTAACTACATCGTGAA
GACAAAGAAGAAGTAAGAGTTAATACAGATGGGCAATTTGAAGAACTCCC
AGAACCCGAAGAGAAGATTCAAAGTACGAAAGAGACATATGATCGTTTCG
ATAAATTTGAAAAGGCAGAAAAGAAGCAACCAACTTCGCCAACCAAACAA
AGTTCGCCCTCCAAAAGAACTAATCCTGTCACTAAAACTATGGAAAATAA
AGACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAAGACTTTCTTGAACG
AATGGATTGAAGGCTACACAATAGGAGATTCCGCTACAAAACGTTCTAAT
ACcaattcaaccaatcaaattaatACAAATCAGCCACGTGATGAGAAAGA
ATTCCAAGCAAAAGTGATGAATTTCTTATCCAAGAATCCTGATTGGTCGA
ACGAAGCAACTTTGTCTGAAAACtttcaagagaaaatgaaagtgaagagc
AATAACCAAGAAAAACCATACATGCCTCCTGTCGATTGGAAATCACAAGC
TCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTGGTTTCTAGTTTGGAGA
AATTACAAGACATTCTCGAGTTGTCAAAGTCTGATTTGGTGCAACTTGAT
TTCTTCAGCTTTCTGGATAAACTAAAATACACACGAgaaaatattgtttt
gaaaacgaaagagtGGATCATTGTCTCTATTGGTTTATTACTTATCTATT
CTCAAGGATGTCCAgaaatttccaaatcttttgatAAGAATGTGACTCAT
TTGAAACGATTCTTAACAGACAAGTCTCTACCGGACcttcaatcaatcaa
aaacatATGTCCTTCCATAGCTACTAAAAAGACTGAGAGTGACAATATTG
AGGAGAATATTATTAACGTTAGCGAGGATATTGATTCCGATGATGATAGT
ATCTCAGATGAAGATGCTTATGGAGATAATATCTTTCCTCCAGACTCGAA
CACAGCAACTACGAATTATGAATGTGACTTATCGACTATTTGTGAATATG
GAGGTGAATTTGAAGAATTGGATTAACTACATCGTGAAGACAAAGAAGAA
GTAAGAGTTAATACAGATGGGCAATTTGAAGAACTCCCAGAACCCGAAGA
GAAGATTCAAAGTACGAAAGAGACATATGATCGTTTCGATAAATTTGAAA
AGGCAGAAAAGAAGCAACCAACTTCGCCAACCAAACAAAGTTCGCCCTCC
AAAAGAACTAATCCTGTCACTAAAACTATGGAAAATAAAGACCTTGAAAT
GCTTGCAAGTTTAGAAAAAGCAAAGACTTTCTTGAACGAATGGATTGAAG
GCTACACAATAGGAGATTCCGCTACAAAACGTTCTAATACcaattcaacc
aatcaaattaatACAAATCAGCCACGTGATGAGAAAGAATTCCAAGCAAA
AGTGATGAATTTCTTATCCAAGAATCCTGATTGGTCGAACGAAGCAACTT
TGTCTGAAAACtttcaagagaaaatgaaagtgaagagcAATAACCAAGAA
AAACCATACATGCCTCCTGTCGATTGGAAATCACAAGCTCTACTCAGGAA
GAGAATTGTCAAAGAAAAGGTGGTTTCTAGTTTGGAGAAATTACAAGACA
TTCTCGAGTTGTCAAAGTCTGATTTGGTGCAACTTGATTTCTTCAGCTTT
CTGGATAAACTAAAATACACACGAgaaaatattgttttgaaaacgaaaga
gtGGATCATTGTCTCTATTGGTTTATTACTTATCTATTCTCAAGGATGTC
CAgaaatttccaaatcttttgatAAGAATGTGACTCATTTGAAACGATTC
TTAACAGACAAGTCTCTACCGGACcttcaatcaatcaaaaacatATGTCC
TTCCATAGCTACTAAAAAGACTGAGAGTGACAATATTGAGGAGAATATTA
TTAACGTTAGCGAGGATATTGATTCCGATGATGATAGTATCTCAGATGAA
GATGCTTATGGAGATAATATCTTTCCTCCAGACTCGAACACAGCAACTAC
GAATTATGAATGTGACTTATCGACTATTTGTGAATATGGAGGTGAATTTG
AAGAATTGGATTAACTACATCGTGAAGACAAAGAAGAAGTAAGAGTTAAT
ACAGATGGGCAATTTGAAGAACTCCCAGAACCCGAAGAGAAGATTCAAAG
TACGAAAGAGACATATGATCGTTTCGATAAATTTGAAAAGGCAGAAAAGA
AGCAACCAACTTCGCCAACCAAACAAAGTTCGCCCTCCAAAAGAACTAAT
CCTGTCACTAAAACTATGGAAAATAAAGACCTTGAAATGCTTGCAAGTTT
AGAAAAAGCAAAGACTTTCTTGAACGAATGGATTGAAGGCTACACAATAG
GAGATTCCGCTACAAAACGTTCTAATACcaattcaaccaatcaaattaat
ACAAATCAGCCACGTGATGAGAAAGAATTCCAAGCAAAAGTGATGAATTT
CTTATCCAAGAATCCTGATTGGTCGAACGAAGCAACTTTGTCTGAAAACt
ttcaagagaaaatgaaagtgaagagcAATAACCAAGAAAAACCATACATG
CCTCCTGTCGATTGGAAATCACAAGCTCTACTCAGGAAGAGAATTGTCAA
AGAAAAGGTGGTTTCTAGTTTGGAGAAATTACAAGACATTCTCGAGTTGT
CAAAGTCTGATTTGGTGCAACTTGATTTCTTCAGCTTTCTGGATAAACTA
AAATACACACGAgaaaatattgttttgaaaacgaaagagtGGATCATTGT
CTCTATTGGTTTATTACTTATCTATTCTCAAGGATGTCCAgaaatttcca
aatcttttgatAAGAATGTGACTCATTTGAAACGATTCTTAACAGACAAG
TCTCTACCGGACcttcaatcaatcaaaaacatATGTCCTTCCATAGCTAC
TAAAAAGACTGAGAGTGACAATATTGAGGAGAATATTATTAACGTTAGCG
AGGATATTGATTCCGATGATGATAGTATCTCAGATGAAGATGCTTATGGA
GATAATATCTTTCCTCCAGACTCGAACACAGCAACTACGAATTATGAATG
TGACTTATCGACTATTTGTGAATATGGAGGTGAATTTGAAGAATTGGATT
AACTACATCGTGAAGACAAAGAAGAAGTAAGAGTTAATACAGATGGGCAA
TTTGAAGAACTCCCAGAACCCGAAGAGAAGATTCAAAGTACGAAAGAGAC
ATATGATCGTTTCGATAAATTTGAAAAGGCAGAAAAGAAGCAACCAACTT
CGCCAACCAAACAAAGTTCGCCCTCCAAAAGAACTAATCCTGTCACTAAA
ACTATGGAAAATAAAGACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAA
GACTTTCTTGAACGAATGGATTGAAGGCTACACAATAGGAGATTCCGCTA
CAAAACGTTCTAATACcaattcaaccaatcaaattaatACAAATCAGCCA
CGTGATGAGAAAGAATTCCAAGCAAAAGTGATGAATTTCTTATCCAAGAA
TCCTGATTGGTCGAACGAAGCAACTTTGTCTGAAAACtttcaagagaaaa
tgaaagtgaagagcAATAACCAAGAAAAACCATACATGCCTCCTGTCGAT
TGGAAATCACAAGCTCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTGGT
TTCTAGTTTGGAGAAATTACAAGACATTCTCGAGTTGTCAAAGTCTGATT
TGGTGCAACTTGATTTCTTCAGCTTTCTGGATAAACTAAAATACACACGA
gaaaatattgttttgaaaacgaaagagtGGATCATTGTCTCTATTGGTTT
ATTACTTATCTATTCTCAAGGATGTCCAgaaatttccaaatcttttgatA
AGAATGTGACTCATTTGAAACGATTCTTAACAGACAAGTCTCTACCGGAC
cttcaatcaatcaaaaacatATGTCCTTCCATAGCTACTAAAAAGACTGA
GAGTGACAATATTGAGGAGAATATTATTAACGTTAGCGAGGATATTGATT
CCGATGATGATAGTATCTCAGATGAAGATGCTTATGGAGATAATATCTTT
CCTCCAGACTCGAACACAGCAACTACGAATTATGAATGTGACTTATCGAC
TATTTGTGAATATGGAGGTGAATTTGAAGAATTGGATTAACTACATCGTG
AAGACAAAGAAGAAGTAAGAGTTAATACAGATGGGCAATTTGAAGAACTC
CCAGAACCCGAAGAGAAGATTCAAAGTACGAAAGAGACATATGATCGTTT
CGATAAATTTGAAAAGGCAGAAAAGAAGCAACCAACTTCGCCAACCAAAC
AAAGTTCGCCCTCCAAAAGAACTAATCCTGTCACTAAAACTATGGAAAAT
AAAGACCTTGAAATGCTTGCAAGTTTAGAAAAAGCAAAGACTTTCTTGAA
CGAATGGATTGAAGGCTACACAATAGGAGATTCCGCTACAAAACGTTCTA
ATACcaattcaaccaatcaaattaatACAAATCAGCCACGTGATGAGAAA
GAATTCCAAGCAAAAGTGATGAATTTCTTATCCAAGAATCCTGATTGGTC
GAACGAAGCAACTTTGTCTGAAAACtttcaagagaaaatgaaagtgaaga
gcAATAACCAAGAAAAACCATACATGCCTCCTGTCGATTGGAAATCACAA
GCTCTACTCAGGAAGAGAATTGTCAAAGAAAAGGTGGTTTCTAGTTTGGA
GAAATTACAAGACATTCTCGAGTTGTCAAAGTCTGATTTGGTGCAACTTG
ATTTCTTCAGCTTTCTGGATAAACTAAAATACACACGAgaaaatattgtt
ttgaaaacgaaagagtGGATCATTGTCTCTATTGGTTTATTACTTATCTA
TTCTCAAGGATGTCCAgaaatttccaaatcttttgatAAGAATGTGACTC
ATTTGAAACGATTCTTAACAGACAAGTCTCTACCGGACcttcaatcaatc
aaaaacatATGTCCTTCCATAGCTACTAAAAAGACTGAGAGTGACAATAT
TGAGGAGAATATTATTAACGTTAGCGAGGATATTGATTCCGATGATGATA
GTATCTCAGATGAAGATGCTTATGGAGATAATATCTTTCCTCCAGACTCG
AACACAGCAACTACGAATTATGAATGTGACTTATCGACTATTTGTGAATA
TGGAGGTGAATTTGAAGAATTGGATTAACTACATCGTGAAGACAAAGAAG
AAGTAAGAGTTAATACAGATGGGCAATTTGAAGAACTCCCAGAACCCGAA
GAGAAGATTCAAAGTACGAAAGAGACATATGATCGTTTCGATAAATTTGA
AAAGGCAGAAAAGAAGCAACCAACTTCGCCAACCAAACAAAGTTCGCCCT
CCAAAAGAACTAATCCTGTCACTAAAACTATGGAAAATAAAGACCTTGAA
ATGCTTGCAAGTTTAGAAAAAGCAAAGACTTTCTTGAACGAATGGATTGA
AGGCTACACAATAGGAGATTCCGCTACAAAACGTTCTAATACcaattcaa
ccaatcaaattaatACAAATCAGCCACGTGATGAGAAAGAATTCCAAGCA
AAAGTGATGAATTTCTTATCCAAGAATCCTGATTGGTCGAACGAAGCAAC
TTTGTCTGAAAACtttcaagagaaaatgaaagtgaagagcAATAACCAAG
AAAAACCATACATGCCTCCTGTCGATTGGAAATCACAAGCTCTACTCAGG
AAGAGAATTGTCAAAGAAAAGGTGGTTTCTAGTTTGGAGAAATTACAAGA
CATTCTCGAGTTGTCAAAGTCTGATTTGGTGCAACTTGATTTCTTCAGCT
TTCTGGATAAACTAAAATACACACGAgaaaatattgttttgaaaacgaaa
gagtGGATCATTGTCTCTATTGGTTTATTACTTATCTATTCTCAAGGATG
TCCAgaaatttccaaatcttttgatAAGAATGTGACTCATTTGAAACGAT
TCTTAACAGACAAGTCTCTACCGGACcttcaatcaatcaaaaacatATGT
CCTTCCATAGCTACTAAAAAGACTGAGAGTGACAATATTGAGGAGAATAT
TATTAACGTTAGCGAGGATATTGATTCCGATGATGATAGTATCTCAGATG
AAGATGCTTATGGAGATAATATCTTTCCTCCAGACTCGAACACAGCAACT
ACGAATTATGAATGTGACTTATCGACTATTTGTGAATATGGAGGTGAATT
TGAAGAATTGGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036951XLOC_036951Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058642-exon-scaffold_312-1491911889:1041..1069TCONS_00058642-exon-scaffold_312-1491911889:1041..1069Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:1041..1069TCONS_00058642-exon-scaffold_312-1510915933:1041..1069Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:1041..1069TCONS_00058642-exon-scaffold_312-1575043694:1041..1069Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1491911889:1691..1741TCONS_00058642-exon-scaffold_312-1491911889:1691..1741Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:1691..1741TCONS_00058642-exon-scaffold_312-1510915933:1691..1741Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:1691..1741TCONS_00058642-exon-scaffold_312-1575043694:1691..1741Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1491911889:4157..4547TCONS_00058642-exon-scaffold_312-1491911889:4157..4547Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:4157..4547TCONS_00058642-exon-scaffold_312-1510915933:4157..4547Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:4157..4547TCONS_00058642-exon-scaffold_312-1575043694:4157..4547Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1491911889:5208..5290TCONS_00058642-exon-scaffold_312-1491911889:5208..5290Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:5208..5290TCONS_00058642-exon-scaffold_312-1510915933:5208..5290Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:5208..5290TCONS_00058642-exon-scaffold_312-1575043694:5208..5290Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1491911889:6609..6692TCONS_00058642-exon-scaffold_312-1491911889:6609..6692Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:6609..6692TCONS_00058642-exon-scaffold_312-1510915933:6609..6692Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:6609..6692TCONS_00058642-exon-scaffold_312-1575043694:6609..6692Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1491911889:7404..7472TCONS_00058642-exon-scaffold_312-1491911889:7404..7472Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:7404..7472TCONS_00058642-exon-scaffold_312-1510915933:7404..7472Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:7404..7472TCONS_00058642-exon-scaffold_312-1575043694:7404..7472Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1491911889:10166..10965TCONS_00058642-exon-scaffold_312-1491911889:10166..10965Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1510915933:10166..10965TCONS_00058642-exon-scaffold_312-1510915933:10166..10965Clytia hemisphaericaexon
TCONS_00058642-exon-scaffold_312-1575043694:10166..10965TCONS_00058642-exon-scaffold_312-1575043694:10166..10965Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058642-proteinTCONS_00058642-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_312supercontigscaffold_312:1041..10965 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.07952	6.08253	3.14691	2.27582	4.35552	3.15277	5.40116	5.30925	5.86878	4.39418	4.30731	4.6221	4.29144	4.87611	5.25355	5.99362	5.01777	7.44871	3.09774	3.91515	5.79663	5.4773	6.73475	6.7099	7.39506	8.02022	3.66416	2.94762	4.4154	4.86832
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058642 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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