TCONS_00058727 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058727
Unique NameTCONS_00058727
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058727 ID=TCONS_00058727|Name=TCONS_00058727|organism=Clytia hemisphaerica|type=transcript|length=2143bp
TATTGGTAGAGGCAATAAAAAGGCTGAATGATAAACTTTTTGAACTATTA
ACAGAACAATTCATTTCATGAGAAGGTTAGTGAAGATATGGCGGATTTGA
TCAGCTCTACATCTTATGTTCCATCAGACGGCATGAAAGTTGAAGATTTA
ATGAAATCAGGCACCGGCATCACTTACAATGACTTCATTATATTGCCAGG
ATATATCGACTTTGGCACTGGAGATGTGGCATTGAATTCACCATTGACGA
AAAAGATCACCTTAAAAACACCATTCATAAGTTCTCCTATGGATACTGTC
ACAGaatCTGATATGGCAAAGACTATGGCTCTTCTTGGAGGTATCGGTAT
AATTCATCATAATTGTTCAATCGAATTCCAAGCAAACGAAGTACACAAAG
TCAAACGTTTCGAACAAGGTTTCATAACAGACCCTATTGTGATTAGTCCT
TCGCATACAGTCACTgatgtcaaaaatattcacaaaaagtTCGGCTTCTC
TGGCTTTCCTGTCACAGAGAATGGGAAAGTTGGTGGTAAATTAGTGGGTA
TTGTCACTAACCGAGATGTTGACTTCATCTCACCTGAAGATCATGAAAAA
CCAGCGTCAGAGATCATGACAATGAAAGAAGAATTGACCGTGGGAAGAGA
TGGCATCACCCTCAAAGAAGCAAACGAAATTCTGTCCAAAAGTAAAAAAG
GAAAACTTCCGATCGTCGACGATGATTTCAATCTGGTTGCGTTGATCTCG
CGGACTGATTTGCAAAAAAATCGTGAATACCCTTTAGCTTCTAAAGATTC
CAAGAAACAACTACTCGTTGGAGCTGCTATCAGTACACATGACGAAGATG
TGCCACGTCTAGCAGCACTCGTTGAAGCAGGGGTTGATGTTGTTGTTCTC
GATTCTTCACAAGGAAATTCATCCTTCCAAATCGAACGTATCAAAGAAAT
CAAAGCCAAATATCCTAATCTAGAAGTCATTGCTGGAAACGTTGTCACTG
CTGCACAAGCTAAGAATTTAATTGATGCCGGCGCTGATGGCTTACGTGTG
GGTATGGGTAGTGGATCCATTTGTATCACACAAGAAGTGTGTGCTGTTGG
GCGGCCCCAAGGTACTGCCGTCTTTTATGTCAGTGAATACGCCCGTCGTT
TCGGTGTTCCTTGTATCGCTGACGGGGGTATTTCAAATGCTGGACACATC
ATTAAAGCGTTAACGCTGGGAGCATCGACTGTGATGATGGGCTCGTTATT
AGCTGGTACTTTTGAAGCGCCTGGTGAATACTTCTATCAAAATGGCGTTC
GTTTGAAGCGATACCGTGGTATGGGATCGCTCGGTGCTATGAAAAGCAAA
GGAAGTCAAAGTCGCTATTTCGTGGAAAGTGACAAAGTGAAAGTTGCTCA
AGGTGTCAGTGGTTCAGTGGAAGATAAAGGGAGTTTGTTCAAATTCATTC
CTTACCTTACTGCGGGTGTTCAACACGGATGTCAAGATATTGGAGCTAAA
TCTCTNATCCCTTACCTTACCGCGGGTGTTCAACACGGATGTCAAGATAT
TGGAGCTAAATCTCTTACTTCGCTAAGATCGATGACATACAGTGGACAAT
TAAGAGTTGAAAAACGCACACCATCCGCTCAAAGAGAAGGAGGGGTGCAT
GGCCTTCATTCGTACGAGAAGCAACTTTTTTAAAATGGTCTAGCTaatta
attgcactttttaatCAATATGACATGAAAATAATGTTTGGGACGCTGGC
TGTATTTTTACACTTCGTTGTATTTGGTCCAtggttaaatatatttttat
ttgaatttttagatGAATTAGTTGATTAGTgattagaaaatttttctttg
agttttttATATTGTGTActgtaattaaatattaaaatagaaaattactt
tttgtttattatatcctaaatattgttgaaagttttattttgttttctca
CATTTGTATTTTGTCCTTCTTCACCTTTGAAACCAGTTGAAACCTACTTT
TGATGACTGCTTgtttcgtttgttttttttgcggAATCAAACGATTTGGC
ATGACACCTCTTACAAATCCCGTTAGAACCCGTTAGTTAGTCTAGAATTA
TTTATCAATCTTTTTACaatgaatttttaaacattttcggTAG
Run BLAST on NCBI

transcript from alignment at scaffold_313:532877..539907+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058727 ID=TCONS_00058727|Name=TCONS_00058727|organism=Clytia hemisphaerica|type=transcript|length=7031bp|location=Sequence derived from alignment at scaffold_313:532877..539907+ (Clytia hemisphaerica)
TATTGGTAGAGGCAATAAAAAGGCTGAATGATAAACTTTTTGAACTATTA ACAGAACAATTCATTTCATGAGAAGGTAAGTTTATTATATTAAAATCGAC AAATTTGTCCAGCTGGTAGATTTGGTGATAATTTATGGGTATCATTATat tcaaagttgataaaatttaatgagTGGCTTGATTTGAAGACTTAAAATCG CAAAACCAAAAAGCAATTTAAATAGTTCAACAGTCACATTATCACAGGCT TATAAATAGTGTAGTTAATTACTTTAGCAGctcaccaaaatttgaaaatc acagAGTTTTCCTTGTCAGAATAAGTGCAATCTTGTTTCATGCAGAGTGC AATTATGTCTGATGTGGTAACTTTTTTACGTTGTTtttgtattataaaaa aagataaaagctTATCAGACTAGACATTTTTCAGCAACTGGTATGTACTT ACTtatgataaaaatgaaagatCATAGAAAATTGTATCACCAGTTTGTGG CTTTAACGTTGAGGAATATTCATATAACAtaagttttagctttttaaatt ttgatgtccACTGTTACCTTATTAATTGCGTTCATATTGTGTTCATAGGT TAGTGAAGATATGGCGGATTTGATCAGCTCTACATCTTATGTTCCATCAG ACGGCATGAAAGTTGAAGATTTAATGAAATCAGGCACCGGCATCACTTAC AAGTATgtctttttcgaattttctatttttttggtgGGTGGCCTCGCCTC AGTTGCCTGATTGTTTGCCTTTTTNCTCGAACTAATTTTTGGTGACCTCG CCTCAGTTGCCTGAGAATTTGCCTTTTTAATCACCTTTCTCTTGTTTTAT ATCTCGCAATCTTTTCTTGAAAACTGGTCAGTTATTCTAAAGTCCGAAGT TCCGATGCAAGTTTTTTTATCCTTTCCTCTTCAATGCTGAGTGTAACTTT TGATGGTCTCCATCGCCTGCTTGTATAGATTCCGTCTTTTATCAGAACTG ATCAGTGGACTTTTATTTATTCCCGCCTTTGAAGagtttttgttcctttt tcagTGACTTCATTATATTGCCAGGATATATCGACTTTGGCACTGGAGAT GTGGTACGTACTTTACCCCCGTTAAAGCTtctattttaaatgtttttgtt aCAAAGACTGCGTATCGATTTTAATTTATTATGTACCCTACCCTGCATTC CATGGCCTTATTTTGGATGTCTAAGTTATGCATTCTTACAATGCTTGTCT TTCAGTCTgtccaaatttctttttctatatCACCGATTCGCACAACACGT ACTCGTTGTGTTTGGCAATTTAAGAAAAAAGACGTGCATTCTCTTTCatt attttccaaaatctgATAAAACACGTTAGTATTTAATTATACCAATGATA TGTCGGACGATTTAAAACCAAAGCTCTTATTTTTAGGCATTGAATTCACC ATTGACGAAAAAGATCACCTTAAAAACACCATTCATAAGTTCTCCTATGG ATACTGTCACAGGTAAATCTTTTTTCAGTGATTAAAATAGATTTCTCTTC AATATTGATCTCGTCAATTTGATAAGGTACTGCGGTACCTAGATAAGCTT ATTGgctgattaggaagtgttctaagttcaggccttagaacacttgGCCT Gacaagggaatttgagtcaacgcgtttggcttggtagggtaaacgcggtg atcacatagcaaaaatgagtgattgtgaagtgttctaaggcctgaacTAG GGTTCAGAAGACCTGACAAGtgaatttgagtcactgcgtttggcttggta gggtaaacgcggtgatcacaTAGCTAAAATGAGTGGTTAtgaagtgttct aaggcctgaacTAGGGTTCAGAAGACCTGACAAGGGAATTTGAGTcgccg tgtttggcttggtagggtaaacgcggtgatcacatagcaaaaatgagtga tgaGATTAGTtcaaataagaacatttaactTATAAGAGACGTTCAAATGC ATTCAGTGCGACTCTCTGAGCTGTTAGCTTCTGTTCATTTCTTTTACAGT TGACGCTCGCTTAATTAAATTTCTATTATTCATATATTTCTATGATTCGA AATTATTCCCAGTCCCCGACAAGGAAGAAactcgaatctctctgtaattt gaaCGAAAAAGATTCCCTGTTCGAGTTTGAATTAGCGAGAGTGAACTgtt taaatatttcattttttagaatCTGATATGGCAAAGACTATGGCTGtaag ttgaaaatgttttttttttgtcatgcTTAGTAACGGCCATTTTACTTTAG CTCTAAGCGATATACTCATCATACTACTATGCTCGTAAAGGAACattttt atgattaaaaaagGGTTTTGTTTTATTTAGCTTCTTGGAGGTATCGGTAT AATTCATCATAATTGTTCAATCGAATTCCAAGCAAACGAAGTACACAAAG TCAAACGTTTCGAACAAGGTTTCATAACAGACCCTATTGTGATTAGTCCT TCGCATACAGTCACTgatgtcaaaaatattcacaaaaagtTCGGCTTCTC TGGCTTTCCTGTCACAGGTTTGTAATGACTTTTTTCCCTGCTTGCGTTTC TCCCTTTTTTATGATGTAATGCGagacaaatttgatattttgttcTTTGG GAAGACCTTCAGAAAACTGTGGGTCGGTCGTTCGTTCggtattataaaaa taaatttctttaagTCTAGCGTCGGAAGGTCTAAAAGATTTGTGACGTTT TGAATCAGTACACTTTTTGCTCTTTATCGATGAGCTTTCATGCCATTTCA AATGTGATATTTTAAAATCATCTTAGTTTTGGGATGAATTTacacttttt caacttattCAGTTAAAAATATCTGCAAAAAACTTATGATATTATTccca ttttagaaaaaaacatagTCGGTCTCGCCTTTATCCATTTTCATAAAAAG GTTGGGCTGGGTTTTTGACTATTAATCGCTAACTATTTTATTTACATTGT TTTATTCGGATCAAATCACTatattttcaccaaattttcagcaatttttG ATGTCAGAAGTAACGTTTAGGTCCTTTCAAAGTTCGAGGTATTAAAACGG ATGTATAAAAGCACCATTTTGGAGTTCGAAAGTCGAATAATTTATCTTAA AAATAACGTCTTAGCATTTAGGATAGGTCACtccattgggctcttccaga aaaaaaaattgaatatggggggggggttggaggatataacattttttgga aatttaaccccccccccccccccccNNNNNNNccccccccggacaagcat cagttgacctcccggacaagcatcagttgaccccccggacattcaaaatc acccctaatcagAGCAAATTTACCACTAAAACAAGGCaagttttgcagat ttttcactaccccctgacaaaatatccaatatatcctccacccccatgta caaaaatGTTCTGGAAGAGCACATTAATACATGGGTATTTAGAATAATAT AAGAAGGTTACTCaaagttaaaaataaatttagatAATTTGGTTTGCACC CTTCCAAATTTTTTACTAATCTTTTCCGTAGAGAATGGGAAAGTTGGTGG TAAATTAGTGGGTATTGTCACTAACCGAGATGTTGACTTCATCTCACCTG AAGATCATGAAAAACCAGCGTCAGAGGTGAATTCTTTTTTAACTCATTTG ATAATATGCAATTTTTTTCACATACGAATATCTAGAGTTCGGACTAGGAT AATCTGGAGGTTTTCATGTAATATAATCTCTACCATTGCGGTCGATTTGC GTAAGGAATCACCTCTGCAAAATTTGTTCTTCCATATTGGTCGATTTCCC GTTAAAGATACATAGCTTTGCCGAGCCTGAAAGCCTTTGGATCCCCTGCC TCGTCAGCCATTTCTAACTTAAGGAAGATATTTTTagaattcaatttttg tttttactgaCGGGTTTTTTACCATGCTTTTTACCATGCTTGAATTGTGC ATAGAAACATTTTTAGTGTTGATAATTTACTGCAATAAAAGTTTGTATTT TATGGAATACATTGTAAAggtttctaaaaacaaaataaaaatatttattg ctgtaaattttttttcccgaaATCAGTCAACCAGGGAAATTTAATTCTGC GAATGTTTAAATTTTGGCTAAACCGCTAAATTTGCTGTTTTTGAGGTCTA AACCACGGAAGACGGTAAAACCaatttttgtttagattttataaaaatcc cttttattttggaagaaaatCGTTATCACTTTTTGCTTTCATAGATCATG ACAATGAAAGAAGAATTGACCGTGGGAAGAGATGGCATCACCCTCAAAGA AGCAAACGAAATTCTGTCCAAAAGTAAAAAAGGTAGGGTCAATTCAATTG CTCACTATTAATTTCGTTAATTTAAACTTTTGCTTTgagcttaaaactaa aaaacttaaaaacttgCAGATTTTTAACACATAGTCTGAGTGATCAACCT TCCATTTTCTCTAATATTCCTAAATGTCTTTTTTTCACCTCAGGAAAACT TCCGATCGTCGACGATGATTTCAATCTGGTTGCGTTGATCTCGCGGACTG ATTTGCAAAAAAATCGTGAATACCCTTTAGCTTCTAAAGATTCCAAGAAA CAACTACTCGGTATGCTCATCTTTGCAGCTCTTGAGTATTATCATTATCG ATGTTCTCAAATACGTTCCCTTATCCATATATCTGTTTCATTCCATTATT GACAAGAAACAATTTCCGATGAAATGAGTCAAAATTCTCCCTGCTATCTT CAGCCGACAAAGCTTTCCGCGATTTTTATCCTCGCAAAAATTTCAAGACG AGTGTATTAGTGTATAAGTTAATCTTCTCCTTTCGTTCAGTTGGAGCTGC TATCAGTACACATGACGAAGATGTGCCACGTCTAGCAGCACTCGTTGAAG CAGGGGTTGATGTTGTTGTTCTCGATTCTTCACAAGGAAATTCATCCTTC CAAATCGAACGTATCAAAGAAATCAAAGCCAAATATCCTAATCTAGAAGT CATTGCTGGAAACGTTGTCACTGCTGCACAAGCTAAGAATTTAATTGATG CCGGCGCTGATGGCTTACGTGTGGGTATGGGTAGTGGATCCATTTGTATC ACACAAGAAGTGTGTGCTGTTGGGCGGCCCCAAGGTACTGCCGTCTTTTA TGTCAGTGAATACGCCCGTCGTTTCGGTGTTCCTTGTATCGCTGACGGGG GTATTTCAAATGCTGGACACATCATTAAAGCGTTAACGCTGGGAGCATCG ACTGTGATGATGGGCTCGTTATTAGCTGGTACTTTTGAAGCGCCTGGTGA ATACTTCTATCAAAATGGCGTTCGTTTGAAGCGATACCGTGGTATGGGAT CGCTCGGTGCTATGAAAAGCAAAGGAAGTCAAAGTCGCTATTTCGTGGAA AGTGACAAAGTGAAAGTTGCTCAAGGTGTCAGTGGTTCAGTGGAAGATAA AGGGAGTTTGTTCAAATTCATTCCTTACCTTACTGCGGGTGTTCAACACG GATGTCAAGATATTGGAGCTAAATCTCTNATCCCTTACCTTACCGCGGGT GTTCAACACGGATGTCAAGATATTGGAGCTAAATCTCTTACTTCGCTAAG GTATGAAAGGATGAAGTCGAATTTAGAGAAAGTTTCtcatgaaagttctc ttttcgCTTTAATGTAATATCACCTTATCACTTTTGTTTCAGTTCTTCTT TATAATAGATTTAGAGTAAAatactatttaaaaaaaatgcacACACAAAT TTCCTTACAGTTAAACATTCAtggtaaaaaaagtaaaaataccatggcag aaattttaaaatgtatgtCAGTAAAAAAATACTCTTGATATTATTTTTAG ATCGATGACATACAGTGGACAATTAAGAGTTGAAAAACGCACACCATCCG CTCAAAGAGAAGGAGGGGTGCATGGCCTTCATTCGTAAGTTGTAATTTGT TGGTTTCTTCTGTAAAAGGGGAGGGGCTGActaatactttaggcgtacaa actttcgcgagcagaaactttcgcgattttcgcgaattttggcccttttc gcgaaagtaaatgtctttaaaaattcttgNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAAaagaggatg aaaagaagatgTCAAACCCTTATTTTATTATGAAAAAGCTTCCTATTGCT TGCCGATGGCGCTATCTTCTGTAGACAGATGTTATAAGAAAAATCGACTT CCAACTCCAGATACGTCTGAAATTTCCTTGCTCTCAGTATTTTATAAACA GTGTTTGCTTTTTTTACCTATATTATTTTTCCTTAATTTCCTTTTTTAGG TACGAGAAGCAACTTTTTTAAAATGGTCTAGCTaattaattgcacttttt aatCAATATGACATGAAAATAATGTTTGGGACGCTGGCTGTATTTTTACA CTTCGTTGTATTTGGTCCAtggttaaatatatttttatttgaatttttag atGAATTAGTTGATTAGTgattagaaaatttttctttgagttttttATAT TGTGTActgtaattaaatattaaaatagaaaattactttttgtttattat atcctaaatattgttgaaagttttattttgttttctcaCATTTGTATTTT GTCCTTCTTCACCTTTGAAACCAGTTGAAACCTACTTTTGATGACTGCTT gtttcgtttgttttttttgcggAATCAAACGATTTGGCATGACACCTCTT ACAAATCCCGTTAGAACCCGTTAGTTAGTCTAGAATTATTTATCAATCTT TTTACaatgaatttttaaacattttcggTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036992XLOC_036992Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058727-exon-scaffold_313-1491911889:532877..532951TCONS_00058727-exon-scaffold_313-1491911889:532877..532951Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:532877..532951TCONS_00058727-exon-scaffold_313-1510915933:532877..532951Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:532877..532951TCONS_00058727-exon-scaffold_313-1575043694:532877..532951Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:533475..533578TCONS_00058727-exon-scaffold_313-1491911889:533475..533578Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:533475..533578TCONS_00058727-exon-scaffold_313-1510915933:533475..533578Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:533475..533578TCONS_00058727-exon-scaffold_313-1575043694:533475..533578Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:533931..533979TCONS_00058727-exon-scaffold_313-1491911889:533931..533979Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:533931..533979TCONS_00058727-exon-scaffold_313-1510915933:533931..533979Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:533931..533979TCONS_00058727-exon-scaffold_313-1575043694:533931..533979Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:534313..534388TCONS_00058727-exon-scaffold_313-1491911889:534313..534388Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:534313..534388TCONS_00058727-exon-scaffold_313-1510915933:534313..534388Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:534313..534388TCONS_00058727-exon-scaffold_313-1575043694:534313..534388Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:535096..535121TCONS_00058727-exon-scaffold_313-1491911889:535096..535121Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:535096..535121TCONS_00058727-exon-scaffold_313-1510915933:535096..535121Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:535096..535121TCONS_00058727-exon-scaffold_313-1575043694:535096..535121Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:535257..535443TCONS_00058727-exon-scaffold_313-1491911889:535257..535443Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:535257..535443TCONS_00058727-exon-scaffold_313-1510915933:535257..535443Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:535257..535443TCONS_00058727-exon-scaffold_313-1575043694:535257..535443Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:536458..536552TCONS_00058727-exon-scaffold_313-1491911889:536458..536552Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:536458..536552TCONS_00058727-exon-scaffold_313-1510915933:536458..536552Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:536458..536552TCONS_00058727-exon-scaffold_313-1575043694:536458..536552Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:537171..537258TCONS_00058727-exon-scaffold_313-1491911889:537171..537258Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:537171..537258TCONS_00058727-exon-scaffold_313-1510915933:537171..537258Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:537171..537258TCONS_00058727-exon-scaffold_313-1575043694:537171..537258Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:537420..537536TCONS_00058727-exon-scaffold_313-1491911889:537420..537536Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:537420..537536TCONS_00058727-exon-scaffold_313-1510915933:537420..537536Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:537420..537536TCONS_00058727-exon-scaffold_313-1575043694:537420..537536Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:537767..538526TCONS_00058727-exon-scaffold_313-1491911889:537767..538526Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:537767..538526TCONS_00058727-exon-scaffold_313-1510915933:537767..538526Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:537767..538526TCONS_00058727-exon-scaffold_313-1575043694:537767..538526Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:538777..538860TCONS_00058727-exon-scaffold_313-1491911889:538777..538860Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:538777..538860TCONS_00058727-exon-scaffold_313-1510915933:538777..538860Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:538777..538860TCONS_00058727-exon-scaffold_313-1575043694:538777..538860Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1491911889:539426..539907TCONS_00058727-exon-scaffold_313-1491911889:539426..539907Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1510915933:539426..539907TCONS_00058727-exon-scaffold_313-1510915933:539426..539907Clytia hemisphaericaexon
TCONS_00058727-exon-scaffold_313-1575043694:539426..539907TCONS_00058727-exon-scaffold_313-1575043694:539426..539907Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_313supercontigscaffold_313:532877..539907 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.26484 2.18812 0 0.5235 10.6619 5.12339 43.9013 45.5574 74.5522 56.9308 42.4953 45.1905 34.6628 28.3524 27.6754 40.5321 25.7415 16.3835 32.6759 29.0481 15.9534 5.02182 0.000492088 10.6764 7.75035 0.804958 54.1894 67.6767 1.88509 4.94983
Blast
BLAST of TCONS_00058727 vs. Swiss-Prot (Human)
Match: IMDH1 (Inosine-5'-monophosphate dehydrogenase 1 OS=Homo sapiens GN=IMPDH1 PE=1 SV=2)

HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0
Identity = 361/534 (67.60%), Postives = 421/534 (78.84%), Query Frame = 1
Query:   88 MADLISS--TSYVPSDGMKVEDLMKSGTGITYNDFIILPGYIDFGTGDVALNSPLTKKITLKTPFISSPMDTVTESDMAKTMALLGGIGIIHHNCSIEFQANEVHKVKRFEQGFITDPIVISPSHTVTDVKNIHKKFGFSGFPVTENGKVGGKLVGIVTNRDVDFISPEDHEKPASEIMTMKEELTVGRDGITLKEANEILSKSKKGKLPIVDDDFNLVALISRTDLQKNREYPLASKDSKKQLLVGAAISTHDEDVPRLAALVEAGVDVVVLDSSQGNSSFQIERIKEIKAKYPNLEVIAGNVVTAAQAKNLIDAGADGLRVGMGSGSICITQEVCAVGRPQGTAVFYVSEYARRFGVPCIADGGISNAGHIIKALTLGASTVMMGSLLAGTFEAPGEYFYQNGVRLKRYRGMGSLGAM-KSKGSQSRYFVESDKVKVAQGVSGSVEDKGSLFKFIPYLTAGVQHGCQDIGAKSLIPYLTAGVQHGCQDIGAKSLTSLRSMTYSGQLRVEKRTPSAQREGGVHGLHSYEKQLF 1680
            MAD + S  T YVP DG+  + L  S  G+TYNDF+ILPG+IDF   +V L S LT+KITLKTP ISSPMDTVTE+DMA  MAL+GGIG IHHNC+ EFQANEV KVK+FEQGFITDP+V+SPSHTV DV     + GFSG P+TE G +G KLVGIVT+RD+DF++ +DH    SE+MT + EL V   G+TLKEANEIL +SKKGKLPIV+D   LVA+I+RTDL+KNR+YPLASKDS+KQLL GAA+ T ++D  RL  L +AGVDV+VLDSSQGNS +QI  +  IK KYP+L+VI GNVVTAAQAKNLIDAG DGLRVGMG GSICITQEV A GRPQGTAV+ V+EYARRFGVP IADGGI   GH++KAL LGASTVMMGSLLA T EAPGEYF+ +GVRLK+YRGMGSL AM KS  SQ RYF E DKVK+AQGVSGS++DKGS+ KF+PYL AG+QHGCQ                    DIGA+SL+ LRSM YSG+L+ EKRT SAQ EGGVHGLHSYEK+L+
Sbjct:    1 MADYLISGGTGYVPEDGLTAQQLFASADGLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKKFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQ--------------------DIGARSLSVLRSMMYSGELKFEKRTMSAQIEGGVHGLHSYEKRLY 514          
The following BLAST results are available for this feature:
BLAST of TCONS_00058727 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMDH10.000e+067.60Inosine-5'-monophosphate dehydrogenase 1 OS=Homo s... [more]
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