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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059280 ID=TCONS_00059280|Name=TCONS_00059280|organism=Clytia hemisphaerica|type=transcript|length=973bp
NATTAGTATAAAGTAAGGTAAagggaaaacccttttttattAGAAGTCGA
TGATGGTGGATTTTCTTCATTAGAACATTAGAATATGTCAAACAATTCTT
GGAAAATGCTTGCTCGTAAGTCACCATCTGATCCAAATAATATGTTGGAT
GCAAATTCTAATGATTTAAATCTAAGATTATGGTAACTAATTAAAGAGCC
tccgaaaaaggccaaaatttgcaaaagtcgCGAAAAATTCTGCTGGCGAA
AGTTCATGCAGAAAAGAAATTTCTCTTTctggccattcgcgaaagtttat
gcagaCGAAAAGTTTTTGACgcaatagaaaatctgtaagaAGCTGTAATA
AATATAAGATTCACACGGATTCATTGCACTTTTAGCCTGAAAAAGCCTCA
TTCACAAGTCAAAAGACAAAGACTGCAATCTAATTCATTCAAGAATTGTC
TGTTCCTTTAATAAGCCatcatttctttaaaaattttaaaattaacgATT
CGTGAAAGTTTGTCGTAAACTTTGCGCTATTTCGGCCTCGCAAAACTTTG
TGCtcgtttgtacgcctaaagtgaTCAGTGATTTCGCCAGATCCAGGTGC
CGAATTTCTccaaaataaatataatcaaTTTATTGTGGCTTTGATGTGAA
AACTACCCCTAAGTTATCATCATTCAGTCCCTTAACAATAGCTAAAATAG
GTTAAACATTTTTATCATCTCGGTAGTCAAGACAGGGGTATTTCCACTTA
AACATTTTGTATTGAATGGTTGTGATAGAACCTGTTTACCTGTTCCTTTT
TTGCCTAATGTTAATGAATGTGTCCCCGGTGAAAAAAATACTGCAAATTG
ACAATAGAAATATCATTAGCAAAAAGGCCGCTTTGTGATATGACAGCCGA
TGGTTCTTACAGCTGGCTTACAAATCATTTTGACTCAAGAAACCTCTGTA
TCACTATATTACTGGAGGGTTAT Run BLAST on NCBI transcript from alignment at scaffold_323:33485..34457 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059280 ID=TCONS_00059280|Name=TCONS_00059280|organism=Clytia hemisphaerica|type=transcript|length=973bp|location=Sequence derived from alignment at scaffold_323:33485..34457 (Clytia hemisphaerica)
ATAACCCTCCAGTAATATAGTGATACAGAGGTTTCTTGAGTCAAAATGAT
TTGTAAGCCAGCTGTAAGAACCATCGGCTGTCATATCACAAAGCGGCCTT
TTTGCTAATGATATTTCTATTGTCAATTTGCAGTATTTTTTTCACCGGGG
ACACATTCATTAACATTAGGCAAAAAAGGAACAGGTAAACAGGTTCTATC
ACAACCATTCAATACAAAATGTTTAAGTGGAAATACCCCTGTCTTGACTA
CCGAGATGATAAAAATGTTTAACCTATTTTAGCTATTGTTAAGGGACTGA
ATGATGATAACTTAGGGGTAGTTTTCACATCAAAGCCACAATAAAttgat
tatatttattttggAGAAATTCGGCACCTGGATCTGGCGAAATCACTGAt
cactttaggcgtacaaacgaGCACAAAGTTTTGCGAGGCCGAAATAGCGC
AAAGTTTACGACAAACTTTCACGAATcgttaattttaaaatttttaaaga
aatgatGGCTTATTAAAGGAACAGACAATTCTTGAATGAATTAGATTGCA
GTCTTTGTCTTTTGACTTGTGAATGAGGCTTTTTCAGGCTAAAAGTGCAA
TGAATCCGTGTGAATCTTATATTTATTACAGCTtcttacagattttctat
tgcGTCAAAAACTTTTCGtctgcataaactttcgcgaatggccagAAAGA
GAAATTTCTTTTCTGCATGAACTTTCGCCAGCAGAATTTTTCGcgacttt
tgcaaattttggcctttttcggaGGCTCTTTAATTAGTTACCATAATCTT
AGATTTAAATCATTAGAATTTGCATCCAACATATTATTTGGATCAGATGG
TGACTTACGAGCAAGCATTTTCCAAGAATTGTTTGACATATTCTAATGTT
CTAATGAAGAAAATCCACCATCATCGACTTCTaataaaaaagggttttcc
ctTTACCTTACTTTATACTAATN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059280-exon-scaffold_323-1491911889:33485..34457 | TCONS_00059280-exon-scaffold_323-1491911889:33485..34457 | Clytia hemisphaerica | exon |
| TCONS_00059280-exon-scaffold_323-1510915933:33485..34457 | TCONS_00059280-exon-scaffold_323-1510915933:33485..34457 | Clytia hemisphaerica | exon |
| TCONS_00059280-exon-scaffold_323-1575043694:33485..34457 | TCONS_00059280-exon-scaffold_323-1575043694:33485..34457 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_323 | supercontig | scaffold_323:33485..34457 . |
Blast
The following BLAST results are available for this feature:
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