TCONS_00059434 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059434
Unique NameTCONS_00059434
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length532

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059434 ID=TCONS_00059434|Name=TCONS_00059434|organism=Clytia hemisphaerica|type=transcript|length=532bp
TGGGCCCCCAACAActggtggagGGGGTGGTGGAGGGGGTGGGGGTACTG
GTGTGGAGCTTGGTGTTCCCATGAACTCAGGTGGTGGTGGTAAAGGTGAG
TTGGACACTGGCGGTGGAGGCGGCGGAGACATGGGTCTCGGTGACATTCC
TTGACCACCAGCCAtcggtggtggtggtggtggaggGCTACCAGGGTGTC
TGATTGGGCTTCCTCCAGGTGGTGGAGGTGGAGCTGAAGATGGTCGACCT
ATGGAAGATGCATTAGATCCCCTCTTGGTAGATTGTCGGCGTGATGGTGA
CAAGTGAGTGGAGTCATATGACTGTACAGAATGAGCAGGAGATGTTTCAT
GAGGAGGAAGAGGGTCCGCTCCTCCACCGCCTGTATCTTTCTTTTGGATC
TCCCAATCAGGAATATTCTTGGCGACTTGTTTCTTTTTCACCCCTTTGAC
TTGCTTCTTTTCGTTCATATCACGCCGCTTGCCACGATTGTCACGTTTCT
AGAAAAATAGAGTGAATAAAAGTAAGTTGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_327:307988..310047-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059434 ID=TCONS_00059434|Name=TCONS_00059434|organism=Clytia hemisphaerica|type=transcript|length=2060bp|location=Sequence derived from alignment at scaffold_327:307988..310047- (Clytia hemisphaerica)
TGGGCCCCCAACAACTGGTGGAGGTGGTGGTGGAGGTGGTCCTCCTCCTA
CACTTGGAGGAGGAGGTGGTGGTGGAACAGCCCCTCCTGTGACAGGGGGT
GGTGGAGGGGGTGGGGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGGTGGAGGTGGTCCTC
CTCCTACACTTGGAGGAGGAGGTGGTGGTGGAACAGCCCCTCCTGTGACA
GGGGGTGGTGGAGGGGGTGGGGGTACTGGTGTGGAGCTTGGTGTTCCCAT
GAACTCAGGTGGTGGTGGTAAAGGTGAGTTGGACACTGGCGGTGGAGGCG
GCGGAGACATGGGTCTCGGTGACATTCCTTGACCACCAGCCATCGGTGGT
GGTGGTGGTGGAGGGCTACCAGGGTGTCTGATTGGGCTTCCTCCAGGTGG
TGGAGGTGGAGCTGAAGATGGTCGACCTATGGAAGATGCATTAGATCCCC
TCTTGGTAGATTGTCGGCGTGATGGTGACAAGTGAGTGGAGTCATATGAC
TGTACAGAATGAGCAGGAGATGTTTCATGAGGAGGAAGAGGGTCCGCTCC
TCCACCGCCTGTATCTTTCTTTTGGATCTCCCAATCAGGAATATTCTTGG
CGACTTGTTTCTTTTTCACCCCTTTGACTTGCTTCTTTTCGTTCATATCA
CGCCGCTTGCCACGATTGTCACGTTTCTAGAAAAATAGAGTGAATAAAAG
TAAGTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037412XLOC_037412Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059434-exon-scaffold_327-1575043694:310025..310047TCONS_00059434-exon-scaffold_327-1575043694:310025..310047Clytia hemisphaericaexon
TCONS_00059434-exon-scaffold_327-1575043694:307988..308496TCONS_00059434-exon-scaffold_327-1575043694:307988..308496Clytia hemisphaericaexon
TCONS_00059434-exon-scaffold_327-1510915933:310025..310047TCONS_00059434-exon-scaffold_327-1510915933:310025..310047Clytia hemisphaericaexon
TCONS_00059434-exon-scaffold_327-1510915933:307988..308496TCONS_00059434-exon-scaffold_327-1510915933:307988..308496Clytia hemisphaericaexon
TCONS_00059434-exon-scaffold_327-1491911889:310025..310047TCONS_00059434-exon-scaffold_327-1491911889:310025..310047Clytia hemisphaericaexon
TCONS_00059434-exon-scaffold_327-1491911889:307988..308496TCONS_00059434-exon-scaffold_327-1491911889:307988..308496Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:307988..310047 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059434 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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