TCONS_00059867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059867
Unique NameTCONS_00059867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2892

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059867 ID=TCONS_00059867|Name=TCONS_00059867|organism=Clytia hemisphaerica|type=transcript|length=2892bp
CTTTTTAGCCTCAAAGGTATTTGAGAGTAACCGAAGACGGCTGTGGGCTA
GATAAGCCTTTGAAACACTATGGATTCATTAGAAGAGGCTAGAGATGATa
aatacaatgaaaaacatATTCAAGATCGAAAGACTTGGTTTATATCAGAG
TGCTGGCAAGTCAAAGGCAAGTGTGGAAGAGTTCGTTTCCAATTCAACCC
ATTGTCAACTTTTCTTGGTGCTTTCGTCTTGTGGGCCATCCTTATATGGG
CCATTACTGATGAGGAGACCAGCATTGAAAAGATCAATGTTGCGCGACGG
TGGATCACTGATAAATGCACGTGGTTTTACATTGGCAGTCAATTTATTTG
GGTTATCTTGATCgtttatatttatttcaaatatgGACATATCAAACTTG
GATTATCAACAGATCAGGTAGAATACGGAGATTTCGATTATTTTGCCATG
ATCTTTACAACCGGTATATGCAATGGATTGTTTTACGATGGTGCAAGCGC
TCCCATCGCTGGATATAATGATTCCACCGATAATTTACTCATCTACAAGG
GAAAGAGTAATCATATTACGCAAGCGCAGAACTCGTTGAACGTTGTGATG
TTTCATTGGGGTTTCCATGGTTTCAGTGTGTACGTTTTACCTTGTCTCCT
CTTATCTGTTCTTTGCTATCGTAAAGGTTTACCTCTGACAATGCGTTCCT
GCTTGTACCCTGTGTTCGGTAAGAAGATCTTGGGACGATTAGGTGACGTC
ATCGACAGTATCTCCATTATTTGTATGGGGTTCGGAGTAGCTACCTCCTT
CCTATTAGGTGCCATCATGGTGGTAGTAGGGTTACAACCTATCTTTCCTG
AACTAGCTGACAACCAGACTACAAGATTGATTGCGTTATGGGCTATCTCT
ATAATGTCAATGTTTTCGGCAATGAGTGGTATCAAGCTTGGTATCAGGAG
GATGTCGCAACTATGTTTCTTAACAGGAGCTTTATTCACATTAATCGTTG
CGTTCAGTGACAACCTGTGGTATTTACTCAATCTGGCTGTTCAATCGATT
GGTTACTATTTCCAATACCTCATATCGACATCAACATTCACTAGTGCTTT
CGTTCAACAAAGAAATTATCCTAATGGCAAACAACAGGAATTTGATTGGA
TGCATAAAAATACCATCTTCTATTGGGGCTGGTGGTTAGGTTGGGCACCT
TTGGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAAAAG
TGTGATCGAAATTGCTTTCATAATCCCAAGCTTTGTCAATTTCATTTGGT
TTGTCGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATTTCA
ATGAGACTCCATTGCGGCATGAACAAAACAACACGTGATGCTTTAGGAGC
TCCTGATTGGCTACACAGTCTCGGTTGTATTGATGAAGACAAACGATTCT
ATATGGTAATCGAAAAATATGAAGATATCAAGATTATTCTTCAGATTATC
GCTTTGATGCTTACCTTACTGTATTTTATCACGAGTTTCGATTCAGCTGC
TCTCGTCATGGGCACCATCTCCAGTAACGGTCTAGAGGAGCCACCATTGA
TTCAACGTATTTTCTGGTGCATCACCATAGCTGCTTGTACTTCAGCTCTT
ATTGTTTATACTGAATTCACTGATCGTGCTGATGTCAATGCTTTTGCTAT
TCTGGCTGGCCTTCCGTTCGCAGTTTTGATGTGTTTCTGTGCTATTTCAC
TGTGGCGATTATTGAAAATGGAACCATATTGGTTTTACAATGAAGTCGCT
CACTGGGAAATGATTTATGGTCATATTGATGATATTCAAATACTGAAAAA
AGTCCTGTTAGCAATTGTTGCTCCCTGGTACTACCTAGGGCAAATGTCAA
TTAAAATTAGCCTAAATCACCATGGCGACAAGAATGGTAATCATGTAGGT
GAAGGACATCCGCCCGTGTCCGCCCAAACTGCAGGAAGTCCACCCTTATC
CAACCAAAAACGATTTTTCGCGTACTTCAAATTTGCTTTCCCATTCTACT
TATGGATTGTTTTACTTCTTTTACAAATTCGATACCAAAAAATAAATAGT
GTTGGCTGGGCTGTTTTTGTCGGGTTCTTGGTCCTTTCGAGTCGCATTCG
TAGAGCTCTTCGTCGCCAGTATCGAATACAAGGAAATGTTTTCGAAGATA
TTGCGATCATGGCGATTTTCCCGTTTACCGTGGTCCAGATGTATCGACAG
GTCACTTTCGGTGAAAGATCAATCGAAACTGGTGGACGAGCATCCAGGCT
AAACAGTGATACCACAGAAATGAAGAACAACCCATCCACCAAAAGTAACA
GAGGACAACGCAATTTAGCCTACATACAGGATGAATCATTTTCGCCTGAA
TCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAACGTGT
ATTGCTCTGCAGTTGGTActcaacgttgttttaacattcACACAACATTA
TAAATTTGGATGTTAAAAGGATGTGATTTAAACTTTCGTTAATCTTTAGA
TGGATCAATGCAGTTCATTCAAACAACTTTAAAACGATATTCCATagttt
aaaagaagtttttataTGGAAAAATGATACTCATCATCCCAAATTTAAAC
ATAGATTTCGGGTATCTTGTCGGGTATAATCTAAAAACTTGGTTTAGATT
CTTTATAATAATAATTGATCTCGTGTCTCGATTTCCAATCAATTCTGTTA
CGTTTTTTTCTCGGACACGCTAGACTAGAGTGTACTTCTGGCAAAAGTTT
GCTTTTTAATGATACCTTTTGATGACGCTAAGCCCGCGAGCTACTTGACA
AGGATgcaatttttgcgaaaaaaaaactttccgaATAACaag
Run BLAST on NCBI

transcript from alignment at scaffold_331:1221356..1239571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059867 ID=TCONS_00059867|Name=TCONS_00059867|organism=Clytia hemisphaerica|type=transcript|length=18216bp|location=Sequence derived from alignment at scaffold_331:1221356..1239571+ (Clytia hemisphaerica)
CTTTTTAGCCTCAAAGGTATTTGAGAGTAACCGAAGACGGCTGTGGGCTA
GATAAGCCTTTGAAACACTATGGATTCATTAGAAGAGGCTAGAGATGATa
aatacaatgaaaaacatATTCAAGATCGAAAGACTTGGTTTATATCAGAG
TAGGTTTATTATCATACAATTCGAAATAAAATGCATGGTAGCTATCACGT
CTTAAACACACACCTCTCTCTCACAGCCTCGTGAAACTCTTCcccacagc
ggggataaaaatttctattgaaatctcaattctattgttccaagattgaa
aaattcagtggggatggttttggagtgcaattattAAATGCAATTAAAGA
TTgcatttcgaatggggatgaaatcaaagtcaatttcccagtggggcaaa
aattctagggtatttttcccactggggacgaaatttttgccgaATTTTCC
AGTGTGGCTGGGGTTCCAGCGgggctgtgacacaggggtgttcttAAATT
GAGTAACGAAGCGATTCTCAGGAATGTAAACAACCCATATAAGATATTAa
ggaattatttttacatgcATGGCAAAATGGTCATTTCTAATGTTTGAGAT
TTAGATATCCACGTGGAGCTTTCTTTCTTCATAAAATGTGCCTTTTCGGT
TTATTATATTTGTGACAACACGTATATCTGAGTAACTCAGTATTACCAAG
GAATTTGGATTATGTTTTATTAAAGTTCCTTGGTATTACAACTACTTAAC
TGAGGACTGCAAAGTGAGATTCGAACTCACGACTTTCGCATTACTAGTAC
AACTAAGGTCAATGCGCAGATATACTTGTTTCACAATACGGTAAGCCCTT
CATataagcgagtttatgtatttgcacttatgaggacggtaaagtgactg
aagcgatttggaataacccacaGTTCTGACCCGAGAAATCGAGgatggta
aaagtgctgattttccgtcgtcctcagttgattAGGATGTTGACAAATTA
GAGCCTtgccgtctccgtcgcagaaaaacacacatacataaactcagtAA
TAAGGGCATATTAGTCCCATTCAGGTTCATCGAAACGCTGATTTATTTCA
ACATaactgtgtcacagacccgctgggaccccagccccactagaaaattt
agcaaaaatttcgtccccggtggaaaaataccctgaaatttcagccccac
tgggaaattgactttgatttcatccccattcgaaattcaatgtttaataa
ttgcactccaaacccatccccactggatttttaaccttggaacaatagaa
tttctatctatCCCATTGCGATTTCGATAGGAGTTTTTATttccactgag
gaaaaaagttccaccggggctctGAGACAGAGGTGTATTTCAATTACAGG
TGCTGGCAAGTCAAAGGCAAGTGTGGAAGAGTTCGTTTCCAATTCAACCC
ATTGTCAACTTTTCTTGGTGCTTTCGTCTTGTGGGCCATCCTTATATGGG
CCATTACTGATGAGGAGACCAGCATTGAAAAGATCAATGTTGCGCGACGG
TGGATCACTGATAAATGCACGTGgttagtttaatattttttctgtATGTT
AATAGGGTTGTTAAAGAGAATGTTCATGTCTGTAAaactatttaagcaat
tttccTTCGGATATGTATGTAGGAAATCTCAGCTGTAATATGAAACTTTG
AAGTTCGAaagtttttaaactttatttcTCGTTTCAGGTTTTACATTGGC
AGTCAATTTATTTGGGTTATCTTGATCgtttatatttatttcaaatatgG
ACATATCAAACTTGGTAAGTATGGACATAAAGTTTCAGTATTTTTTTTGT
TGTGTGCAGCTGAATTCTGTTGCAGTTTCAGCTGACAAAAACGTCGAATC
AGGGGAAATGAGAGACTTTATGTTGGCATAGGGAGATTTCAAAATTCACG
AAACGGCCGTCATTTTGATTTTGCTCGGGTACCAGAAATCAGATGTCATT
AAAATACACggacaatagaaaaaacaaaagaaatcggaactttaattttt
ttttgtaagtcACCCTTCTCTCACACCCCTGGTCGAATCGACATCTAATT
AAAGTCGATTGCAAAATATTACTTAtgtcactttttgaaaaaaaaagccG
TTAATACAGTTATTAAGAACGCTTTGGTTCCATTCTCTTTTTCACAGGAT
TATCAACAGATCAGGTAGAATACGGAGATTTCGATTATTTTGCCATGATC
TTTACAACCGGTATATGCAATGGATTGTTTTACGATGGTGCAAGCGCTCC
CATCGCTGGATATAATGATTCCACCGATAATTTACTCATCTACAAGGGAA
AGTACGTTGAAAAGTATTGGGCTGcgttatttaaaggttttatttttaca
tgagtgttcccgttttatatcagacacatttcatatcaggacagtgtcta
cctacaatcaaggtcataatatatgagaaaaaagggaaattccccaggaa
gttctgaaaccacaatcgatttgtaagtgctctaaagtaggttcaaaGGG
CAGAGTTTTAActttgagttttaacgctagacttaagaccttaggatcta
aggaccttaggatctgaggatccaaaagttcaaaaatagtccaataaggc
tcagaatatagcctggaagtctgccaacccctcccaagttaagatattcg
attaaattaaagagatagcccaaaatcgactttctcgccgaaactttaaa
tcttgaaaaacgttaaaacatcgatggttaaaataaccggaattttcaat
atatttcaaccatgctTATAATTGTCATATTGTGTTGAATGTTTTTCTTg
gcctctttctgaccaatcttgctccacatccgtgtcaatccaatgtgaaa
aagcttataaatcaaaattgatgagtaagcaaacgatatcattatATATA
CATTATATATCGATATCatatcttatttaaaaacaaaacctttgatATTG
ATCCACATATGGAGGCGGAAGgaaaaataagtttaaaaaacTTATAATTG
TGTGGATATTTCCTGGAAGGAtggcaaaatttacaaaaaaacccTGGAAA
AGGATTCTATTCCCCTTATGGAAAAATTTGCCTCTATGCggtaaagtgag
ggtggacgaacaaaACTTCATCTTTTATCCCCTTTAAAGTTCAGAATAAC
TTTCGCCTCGAAATTTCGGAAACTTTCTTCGAACCTAGAAATTAGCATGT
TGTTTCATCCGTGGAAAAAGGAAAATAGACAGCCAATGCTTTCTCATCCA
ACAACAAGCAAAACTTAAACTCCCTATAATCTCCCCTACACCACTTGGAA
TTTCTTATTTGGGGACACCTCAAAAATGTTCGTCAACCGTCAACCCATTG
TGTGGGCATGAAATGGAAATGGTCgatttattaaaaaattctaGATTTAT
GATTTTCTTGACGTATATTTACATACGGGAAAAAACAGGAGTAGTTCTTT
TTTTTAACCAATATTGAGCCCCTATTGAATTTTACGTAATAAAATTATGa
caattttaagtatttttctgtGTGGAAAATCATGAGTGATACATTAGCTA
AATAATCCAATGAAAACGCAGGGCAAGTTCACAAGTAGTTTTTGATTTAT
CAACACCCTGAGTGACTTAAACTTTGGTAATCTTTTCTTTGccatttgtt
ttcaatttttcggaGCTTCTAAACGCATAAATTTCCAGGAACAGTACAGC
AGCTAGACAGAAGAACTTTCTTGTTCTGGTCAAAATTGATTGATTCATTG
TTGGATTAAGATTCTAAGAAAATGCTTACCAATTTTCTTGTCTAGGAGTA
ATCATATTACGCAAGCGCAGAACTCGTTGAACGTTGTGATGTTTCATTGG
GGTTTCCATGGTTTCAGTGTGTACGTTTTACCTTGTCTCCTCTTATCTGT
TCTTTGCTATCGTAAAGGTAGGTAAATTCgaactttattttataagaact
actATATCTTGCTTAGCCTTCACTgcttttacaagcttttttataagaac
cagtaaattttggttgGTGGTCGTGATTTTTAGGCCTAGATGATTTGTGA
TGTTTATCTTATTCACTTTTTAGCTAAAAAGATGTTTTAAATCCAGTAAC
TTCTGAAACCTTAAGCCTAAGCTTGTTCTTAATTGAGCCTcatgttctaa
taaaaatgttttcataaAGTGAAGTTTTTAGGGCTCAAACCAGTCTTCAA
TCATAAATCTTCTTACATATGAGACTCTTGTTCTTGTTctttggttctta
taaaattattattatataaaaccCCAACcattgttttattgaaaatcact
ATCTGCAGGTTTACCTCTGACAATGCGTTCCTGCTTGTACCCTGTGTTCG
GTAAGAAGATCTTGGGACGATTAGGTGACGTCATCGACAGTATCTCCATT
ATTTGTATGGGGTTCGGAGTAGCTACCTCCTTCCTATTAGGTGCCATCAT
GGTGGTAGTAGGGTTACAACCTATCTTTCCTGAACTAGCTGACAACCAGA
CTACAAGATTGATTGCGTTATGGGCTATCTCTATAATGTCAATGTTTTCG
GCAATGAGTGGTATCAAGCTTGGTATCAGGAGGATGTCGCAACTATGTTT
CTTAACAGGTACAGTCAActttcgcttattcgaacttctattatttgaat
ctttctgtaattcgaacttaatCTCAGTTCCCGTAAGGGAGGAACCCTCt
taaaataatttctataattcgaatctctctgttattCCGACAGATAAGAT
TTCCCGTTCGAGCTAcagtaccgagtttatgtattcgagataaatcgagg
gggacggtataaagcaaagctgacatAGGACCGAagtcaccgtccacttt
gctcgacgacggtaaaaacaccaagataccgtcgtctgtttaggtgagca
aaggcgatataaagccgtacatcaactatcgactttgttttgtatcgatt
tcacttaccgtcgccctcggtatcctccgatacataaactcggtagtgTT
ACAGAGTTACAGTGTTCATAGTTTTTTAGTCCCAGTGAAGTATGAAAAGA
GGGTTTTCTGCCTTTctgaatttcagcaaaatttagcaaaatattgaaaa
caatCTGGACTAATTTGTCGTGCTTAGTCCATTTTACTTCTGAGAGGAAA
AAATTGACCACTGCTTTTAGGATTTAAgtctttattttctattttttgta
tTACCACTGACACTGTGGATATCGGTAGggatataaaaaaatgttgtcTC
AAAGGTTGAAGTTATTTTTCCCATTATATCTGTTTAAATTCAATTCCTGG
AGCTTTGTTCACATTGATTTTGGCGTTCACGAGTATTTAGTCACTCCACC
CTCCTCACAAGGGTAGATAAATAAACTCGCTTATTTTCCgtcaaaaattg
aagttagcgaggttaagcacgggttAATTTTGACAGTAAAatgcgatacc
gtaggcctgtacataacttgccaaagcagaccatgcaagtgaaatcttat
gtacaggcctacgatatcgcattggacggtctaaataaacacttgcttaa
cctcgctgtTACCTTTCCTATGATACCAGTTTAATTCAATAACAATTCAA
TTCCAGGAGCTTTATTCACATTAATCGTTGCGTTCAGTGACAACCTGTGG
TATTTACTCAATCTGGCTGTTCAATCGATTGGTTACTATTTCCAATACCT
CATATCGACATCAACATTCACTAGTGCTTTCGTTCAACAAAGAAATTATC
CTAATGGCAAACAACAGGAATTTGATTGGATGCATAAAAATACCATCTTC
TATTGTAAGTTGAATTAGTATAACTACAGTAtggtctctttaactcgaac
ctttataactcgaatgAACTCCGACAATTTTGTGTTCCCCGTGAGGGTTC
GAGTTGTGGAAAATCCACTGTAGTATAAAGCGGAACTCTGTGCCTCATTC
CTGGTAGGATGGCCGATAGTGTATCTCCTTTTTGGGGGCTTTCTTGAGGC
TGTCGACAATGGAATTTGACATTACTTCAAAAGGGTTTTCTTTTCCACCG
GCTTTTCATTCCCTTTAGCATacaaattttaaattcaagGGTTCtagttt
tcgcggtttttcgaaaaaaagcgACAATTAGTTCCTTCGAAAATTATTTC
CCTTGTAAACTTGACTATATACAGTAGTACTGAAATCATAATATACGAGC
CTTAAATTGAAGTTGTTCTCACAAACACAGAAAAGAGTGTATCAATTTTT
CACTAAGACAGAGAATTTAACAAATCGTTTGGGACGTTTCCAATGACGAA
TTACGTTACAAAATTATGACtattatcttctttttttcgaTTCACTCACT
TAGAGTTAATAAAACGCGATATGTAATGAAGGCCATGCAACATCTGCTat
tatcattttcttttctttttctcgttTTAGGGGGCTGGTGGTTAGGTTGG
GCACCTTTGGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAACAAT
CAAAAGTGTGATCGAAATTGCTTTCATAATCCCAAGCTTTGTCAATTTCA
TTTGGTTTGTCGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCC
ATTTCAATGAGACTCCATTGCGGCATGAACAAGTAGGTGGTCTCACGCAC
TAAGATAGCTcggtttttgaaaagttttagcTACGTGGGacttattttac
aaaataaGTTGGGACTGAACCTCGAaagtttctcaaaattttctgatttt
tctaatTTCGCATAAAATTGCACTCTTGGACTGAACtgactttttgtatt
tttgttttgacgGCCCTACCTAGAACTGTTACATGTTTACTTTGGCGGTA
AACATTGCTATAAATCCAGCGTtcgtgtgaaaaccacgcgggtcaTGCAA
CTTACATAAAAAAGGAGTTCAAAAATACAGCAAGATTTCATCGAAATACT
ATCTATCTTATTTTTACTAGAACAACACGTGATGCTTTAGGAGCTCCTGA
TTGGCTACACAGTCTCGGTTGTATTGATGAAGACAAACGATTCTATATGG
TAATCGAAAAATATGAAGATATCAAGATTATTCTTCAGATTATCGCTTTG
ATGCTTACCTTACTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGT
CATGGGCACCATCTCCAGTAACGGTTagtcctttgttttttttctcattt
ttgtgaCTATTCCTTGTTCTTTAATTAAACTACAACTTTGTATCAAAACC
GCGACTGAAAcctgtccattttcctaatgaTAAAACGGTTCATAACAGCG
AATGAGGGCGGCATGGCCGAAACGAAAGATTTTCTGGGAAATAGAATCCT
ATACAAAGCGATGGTATTTTGTACAATCTAcccttttcgaaattttattc
TTATTCTTACAGGTCTAGAGGAGCCACCATTGATTCAACGTATTTTCTGG
TGCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATT
CACTGATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGT
TCGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGAGTTAAT
TATCATTAATCGGGAACTCTAGATAAGTCCCCCACCCTCCCGAACAGTTA
GCTAAAACATTTTCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCAGTGACAACCTGTGGTATTTACTCAATCTGGCTGTTCAATCG
ATTGGTTACTATTTCCAATACCTCATATCGACATCAACATTCACAAGTGC
TTTCGTTCAACAAAGAAATTATCCTAATGGCAAACAACAGGAATTTGATT
GGATGCATAAAAATACCATCTTCTATTGTAAGTTGAATTAGTATAACTAC
AGTAtggtctctttaactcgaacctttataactcgaatgAACTCCGACAA
TTTTGTGTTCCCCGTGAGGGTTCGAGTTGTGGAAAATCCACTGTAGTATA
AAGCGGAACTCTGTGCCTCATTCCTGGTAGGATGGCCGATAGTGTATCTC
CTTTTTGGGGGCTTTCTTGAGGCTGTCGACAATGGAATTTGACATTACTT
CAAAAGGGTTTTCTTTTCCACCGGCTTTTCATTCCCTTTAGCATacaaat
tttaaattcaagGGTTCtagttttcgcggtttttcgaaaaaaagcgACAA
TTAGTTCCTTCGAAAATTATTTCCCTTGTAAACTTGACTATATACAGTAG
TACTGAAATCATAATATATGAGCCTTAAATTGAAGTTGTTCTCACAAACA
CAGAAAAGAGTGTATCAATTTTTCACTAAGACAGAGAATTTAACAAATCG
TTTGGGACGTTTCCAATGACGAATTACGTTACAAAATTATGACtattatc
ttctttttttcgaTTCACTCACTTAGAGTTAATAAAACGCGATATGTAAT
GAAGGCCATGCAACATCTGCTattatcattttcttttctttttctcgttT
TAGGGGGCTGGTGGTTAGGTTGGGCACCTTTGGTTTCAATATTTGCTACA
CGGATCAGTAAAGGTCGAACAATCAAAAGTGTGATCGAAATTGCTTTCTT
AATCCCAAGCTTTGtcaattttatttggtttgtcGTTGTAGGAGGTGTGT
CCATTGATATGGAAAATCAAGCCATTTCCATGAGACTTCATTGCGGCATG
AACAAGTAGGTGGTCTCACACACTAACATGAAGTTcaatttttgcgaagc
gaatatacatgagcgaagcagttttgctatagtgtgcatgtacctttaaa
aTCTATATACCCAGGGGAGTGCAAGACGAAAACGAAAATTTAGCTCCTAT
CTGTTAAATGTGGGTTAAGTATTCAGATCCCGGTTGTTTTCGTCCAGGTA
AGAGGCGTTACAATATCGGACTGGTAGATTGTATTTAGGATGGCTTCGTC
GAGAAAAAGAACCACTCTACGGCTCCGAAAATCTCCGAGTCAGGGCAACT
TCCATAAAAAATATTCCGTCGTTCCCGTATATTATTAACTTCTTTACTCC
CGCTCCATATCAGAAAGCTGATTGGTTCGGAAAACCAGAGCGCGGTCGAA
GCGTTCAAATATCAGAAAGCTGNTGAACTCTGTGCCTCATTCCTGGTAGG
ATGGCCGATAGTGTATCTCCTTTTTGAGGGCTTTCTTGAGGCTGTCGACA
ATGGAATTTGACATTACTTCAAAAGGGTTTTCTTTTCCACCGGCTTTTCA
TTCCCTTTAGCATacaaattttaaattcaagGGTTCtagttttcgcggtt
tttcgaaaaaaagcgACAATTAGTTCCTTCGAAAATTATTTCCCTTGTAA
ACTTGACTATATACAGTAGTACTGAAATCATAATATACGAGCCTTAAATT
GAAGTTGTTCTCACAAACACAGAAAAGAGTGTATCAATTTTTCACTAAGA
CAGAGAATTTAACAAATCGTTTGGGACGTTTCCAATGACGAATTACGTTA
CAAAATTATGACtattatcttctttttttcgaTTCACTCACTTAGAGTTA
ATAAAACGCGATATGTAATGAAGGCCATGCAACATCTGCTattatcattt
tcttttctttttctcgttTTAGGGGGCTGGTGGTTAGGTTGGGCACCTTT
GGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAAAAGTG
TGATCGAAATTGCTTTCATAATCCCAAGCTTTGTCAATTTCATTTGGTTT
GTCGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATTTCAAT
GAGACTCCATTGCGGCATGAACAAGTAGGTGGTCTCACGCACTAAGATAG
CTcggtttttgaaaagttttagcTACGTGGGacttattttacaaaataaG
TTGGGACTGAACCTCGAaagtttctcaaaattttctgatttttctaatTT
CGCATAAAATTGCACTCTTGGACTGAACtgactttttgtatttttgtttt
gacgGCCCTACCTAGAACTGTTACATGTTTACTTTGGCGGTAAACATTGC
TATAAATCCAGCGTtcgtgtgaaaaccacgcgggtcaTGCAACTTACATA
AAAAAGGAGTTCAAAAATACAGCAAGATTTCATCGAAATACTATCTATCT
TATTTTTACTAGAACAACACGTGATGCTTTAGGAGCTCCTGATTGGCTAC
ACAGTCTCGGTTGTATTGATGAAGACAAACGATTCTATATGGTAATCGAA
AAATATGAAGATATCAAGATTATTCTTCAGATTATCGCTTTGATGCTTAC
CTTACTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCA
CCATCTCCAGTAACGGTTagtcctttgttttttttctcatttttgtgaCT
ATTCCTTGTTCTTTAATTAAACTACAACTTTGTATCAAAACCGCGACTGA
AAcctgtccattttcctaatgaTAAAACGGTTCATAACAGCGAATGAGGG
CGGCATGGCCGAAACGAAAGATTTTCTGGGAAATAGAATCCTATACAAAG
CGATGGTATTTTGTACAATCTAcccttttcgaaattttattcTTATTCTT
ACAGGTCTAGAGGAGCCACCATTGATTCAACGTATTTTCTGGTGCATCAC
CATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTCACTGATC
GTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTTCGCAGTT
TTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGAGTTAATTATCATTA
ATCGGGAACTCTAGATAAGTCCCCCACCCTCCCGAACAGTTAGCTAAAAC
ATTTTCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACC
AAGCCAGAGCTTCCCAAGATTAAAAGGGGGTTTCCCAAATTTTAGATGGA
GTTTCTCAAATACACGGGCTGTAATAGTGTAAAATTATATCTAATCAAGt
acaatgcagtcaaaacacgTGATTActcaaaaaagttcacgtgatctTAT
TCCCATGTTAATTaattgctttacaacttacagctgataactttgttagt
gtcaataaattcgaagcaatcagaaataaatgtcatgtaacaagcacata
aaaatttcgagtaaaagcgtgatttttcttcagactttaattttgcaacc
tgtgtattttttagtagaaactaaaaaaaatttgggaGACACCCAGCTTG
ATTTTGGGAAACTCCGTTTAAAATTATTGGGAAACTCCGTCTAAAATTTG
GGAAGCTCTGGCTTGGTTTGAGAAACTCCATTTAAAATTTGGGAAACTCC
GTCTAAAATTTGGGAAGCTCTGGCTTGNTATAAGAGAGTGAGCAAGAACA
TGAACTTGGCCTTTTTGCATGCTTTGAGATGGGGACGAACATATTCAAGT
TATGGATAATCTGGAAGAATTTATCCCTCCTTCAGTGGAAAAGAGAACTG
ATTGTTTGTCGTTGTTGTTGAGAAATCTTGACTTGGCTGCTCGAAAATAT
GTGGGCTCTGGTTGCTTGCTGTTATAAATATGCATTTGATGGCCAGGATA
AAGTAAATATTGANTAACTCCATTTAAAATTTGGGAAACTCCGTCTAAAA
TTTGGGAAACTCCGGCTTGATTTGGTTGAAAAGAAAAAGCTGAAACTACG
ATGGccctgaaggctcaaaatttctcttgaaaaaacaaccagaGTTTCCC
AAAATCAAGCTGGAGTTTCCCAAATTTTAGACAGAGTTTCCCAAAACCAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TGGTTGTATGCAAGGGACTCTAAAATAAAGACTAGATTTGATATCAacat
ttacatgtaaaaatcttcGAAACCATGAATACTATCATCGATTCACCAAT
CATTTACTGAGGAAAGACTGTCTACCCTGGGATTCGGCAATCTCCATTAA
Cccgacctcgacctcgaccctgacccttgaaaaaggcctaccctcgaccc
ttggaaaaaagccgaccctcgaccaaaatacaataaaaagccgaccctgg
gtaaaaaaacagtttttctggcagtgttttttttaAGGGTCAAAGTCGAG
GTCGAGGTCGGGTTAATGGAGATTGTCCTGGGATTCTAACATAATAAAAA
ACTATTATGGCAGGGGGGATTcgaatgtttgtttttatttaaacattcga
aattcgaaagaTTAGAAAGTTCGATTTTCGAACACGAGGAATTTAAAACC
GGAAGTAAAATGagtcaaaataaaaaccaaaattgaaaataatttacttt
CTAGGTCTAGGTGGAAAAGCTTTCCCGAACAAAAGACgcgattttaatat
tttcttcgaACATTTTTTACTTACCTTACATGAGTATTAGGAGACGTGTA
ATTAAGtgaattaacacgaattgagaaatttcatgttaatttcaaggccg
ttaaataaATTATGAATCATTTTTGTTTGGTGAGACCCCTATAACGTTAG
AAAAAAGAACTTATCGGGCTCATTCAATACTTTCTAtctttttgcttgca
acttgcgaatttagTGACCTGCctcgatcgcttcgcaacttttatacata
tacggcttgtttATTCAGTCGCGATAAGAAATCATGCACTCTAATTTACA
GAAGTGAAGAAAAGCTTAAAATTCAACTCCACAGTACTACCCTTTGCAGA
AATAAGCGCAGAGAAAGCCTTCTGTAGGAGCACGTGGTACATTACTAAAG
CACAAGGATATTGAACTTTTATCCCATTGACTTCAAatccccgaaggggc
tagacccgaaactcctggatgagaaatgaagccgcttatttcccatccaa
aacgcgtgaCCTTTCAAGCTGAAAGTAAAGCCTAtagctagattttgaaa
aatatgttgcgcgaaaagaaaaaaagggcTAGTTTCAATCCGTCATCTTA
AGTGCCGCGCAAATCTtaaagtttcactttttcttgcttgtgaaaggtta
aagattcctATTTAGTCCCNCGAAAAATATGTCGCGCGAAAACAAAAAAA
GGGCTAGTTTCAATCCGTCATCCTAAGTGCCGCGTAAATCTtaaagtttc
actttttcttgcttgtgaaaggttaaagattcctATTTAGTCCCTTCTGC
GGGGGCTTCAAACTCGATGTTTTGTCCGTCATTAGCCTCGGCTTAGTTAA
GATTATCATAAAGGTAGACAAAAGTCCACAACGAGGGGGACACTTtcgat
tacacgcttttttataagaatatactttataagaatattcatgatgaaat
tgatgAGATtaaccaaaaaaattagaaaatgccGAGAATAAACCATCACG
AAAGGTGACAGCTGAACCTAAGAATGacatttttagagtatttttgactt
taaattgccaattattcccCTGTAATGCTCaaaacttttacaaaagtgcc
attttcctttttttttactaGANATTATTCCCCTGTAATGctgaaaactt
ttacaaaagtgccattttcctttttttttactaGAACAACACGTGATGCT
TTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGCATTGATGAAGACAA
AAGATTCTTCATGGTGATCGAAAAATATGAAGATATCAAGATTATTCTTC
AGATTATCGCTTTGATGATTACATTACTGTATTTTATCACGAGTTTCGAT
TCAGCTGCACTCGTCATGGGCACCATCTCGAGTAACGGTTAGTCCTTTGT
TTNTTCAGCTGCACTCGTCATGGGCACCATCTCCAGTAACGGTTAgtcct
ttgtttttttctcatttttgtaaCTATTCCTTGTTCTTTAAACTACAACT
TTGTATCAAAACCGCTACTGAAACTTGCCCATATGATAAAACGGATCACA
ACAGCGAATGAGGGCGGCATGGCCGAAACGAAAGATTTTCTGGGAAATAT
AATCCTATACAAAGCGATGGTATTTTGTACAATCTactcttttcgaaatt
ttattcTTATTCTTACAGGTCTAGAGGAGCCACCATTGATTCAACGTATT
TTCTGGTGCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATAC
TGAATTCACTGATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCC
TTCCGTTCGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGA
GTTAATTATCATTAATCGGGCACCCTCCCGAACAGTTAGCTAAAACATTT
TCGCACGGGAAATTGAATCAATCCAACTAGCTCCTTTTAAAATCAAACCC
TTGGCAGGTACCAAGATGAACGTTCTGTTTGAAAGAATATTCATTAAAGC
AAAGGTAACATATACCAAACATGTATATTTTCATAGATTATTGAAAATGG
AACCATATTGGTTTTACAATGAAGTCGCTCACTGGGAAATGATTTATGGT
CATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGTTGC
TCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATCACC
ATGGCGACAAGAATGGTAATCATGTAGGTGAAGGACATCCGCCCGTGTCC
GCCCAAACTGCAGGAAGTCCACCCTTATCCAACCAAAAACGATTTTTCGC
GTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTCTTT
TACAAATTCGATACCAAAAAATAAATAGTGTTGGCTGGGCTGTTTTTGTC
GGGTTCTTGGTCCTTTCGAGTCGCATTCGTAGAGCTCTTCGTCGCCAGTA
TCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCGATTTTCC
CGTTTACCGTGGTCCAGATGTATCGACAGGTTACTACAAATTATACTTTT
AAATCTTGAATTGACGTTTTTCGTACCCCATCGTATGAGTTTTAGgaaaa
aaggatcaaaatctAAATCAAATATCACTACGGATGTTACTTGCCATtgc
gaaaagattttttcaatatgTAGTTAAATTcccttttcatttgaaataag
tttttcttttttcaaaactacggTACTCATCGCCTGACCCATGAAGTTAT
TGCCTTTTTCTCGCGTCATTTCAGGTCACTTTCGGTGAAAGATCAATCGA
AACTGGTGGACGAGCATCCAGGCTAAACAGTGATACCACAGAAATGAAGA
ACAACCCATCCACCAAAAGTAACAGAGGACAACGCAATTTAGCCTACATA
CAGGATGAATCATTTTCGCCTGAATCTCCGCCCATCTATCAATCTGGTGA
AGATTTCTTAGCTGCTTAACGTGTATTGCTCTGCAGTTGGTActcaacgt
tgttttaacattcACACAACATTATAAATTTGGATGTTAAAAGGATGTGA
TTTAAACTTTCGTTAATCTTTAGATGGATCAATGCAGTTCATTCAAACAA
CTTTAAAACGATATTCCATagtttaaaagaagtttttataTGGAAAAATG
ATACTCATCATCCCAAATTTAAACATAGATTTCGGGTATCTTGTCGGGTA
TAATCTAAAAACTTGGTTTAGATTCTTTATAATAATAATTGATCTCGTGT
CTCGATTTCCAATCAATTCTGTTACGTTTTTTTCTCGGACACGCTAGACT
AGAGTGTACTTCTGGCAAAAGTTTGCTTTTTAATGATACCTTTTGATGAC
GCTAAGCCCGCGAGCTACTTGACAAGGATgcaatttttgcgaaaaaaaaa
ctttccgaATAACaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037650XLOC_037650Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059867-exon-scaffold_331-1491911889:1221356..1221504TCONS_00059867-exon-scaffold_331-1491911889:1221356..1221504Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1221356..1221504TCONS_00059867-exon-scaffold_331-1510915933:1221356..1221504Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1221356..1221504TCONS_00059867-exon-scaffold_331-1575043694:1221356..1221504Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1222755..1222928TCONS_00059867-exon-scaffold_331-1491911889:1222755..1222928Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1222755..1222928TCONS_00059867-exon-scaffold_331-1510915933:1222755..1222928Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1222755..1222928TCONS_00059867-exon-scaffold_331-1575043694:1222755..1222928Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1223093..1223169TCONS_00059867-exon-scaffold_331-1491911889:1223093..1223169Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1223093..1223169TCONS_00059867-exon-scaffold_331-1510915933:1223093..1223169Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1223093..1223169TCONS_00059867-exon-scaffold_331-1575043694:1223093..1223169Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1223553..1223706TCONS_00059867-exon-scaffold_331-1491911889:1223553..1223706Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1223553..1223706TCONS_00059867-exon-scaffold_331-1510915933:1223553..1223706Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1223553..1223706TCONS_00059867-exon-scaffold_331-1575043694:1223553..1223706Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1225201..1225322TCONS_00059867-exon-scaffold_331-1491911889:1225201..1225322Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1225201..1225322TCONS_00059867-exon-scaffold_331-1510915933:1225201..1225322Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1225201..1225322TCONS_00059867-exon-scaffold_331-1575043694:1225201..1225322Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1225714..1226013TCONS_00059867-exon-scaffold_331-1491911889:1225714..1226013Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1225714..1226013TCONS_00059867-exon-scaffold_331-1510915933:1225714..1226013Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1225714..1226013TCONS_00059867-exon-scaffold_331-1575043694:1225714..1226013Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1227012..1227209TCONS_00059867-exon-scaffold_331-1491911889:1227012..1227209Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1227012..1227209TCONS_00059867-exon-scaffold_331-1510915933:1227012..1227209Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1227012..1227209TCONS_00059867-exon-scaffold_331-1575043694:1227012..1227209Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1227836..1228037TCONS_00059867-exon-scaffold_331-1491911889:1227836..1228037Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1227836..1228037TCONS_00059867-exon-scaffold_331-1510915933:1227836..1228037Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1227836..1228037TCONS_00059867-exon-scaffold_331-1575043694:1227836..1228037Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1231768..1231970TCONS_00059867-exon-scaffold_331-1491911889:1231768..1231970Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1231768..1231970TCONS_00059867-exon-scaffold_331-1510915933:1231768..1231970Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1231768..1231970TCONS_00059867-exon-scaffold_331-1575043694:1231768..1231970Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1237824..1238001TCONS_00059867-exon-scaffold_331-1491911889:1237824..1238001Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1237824..1238001TCONS_00059867-exon-scaffold_331-1510915933:1237824..1238001Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1237824..1238001TCONS_00059867-exon-scaffold_331-1575043694:1237824..1238001Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1238192..1238684TCONS_00059867-exon-scaffold_331-1491911889:1238192..1238684Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1238192..1238684TCONS_00059867-exon-scaffold_331-1510915933:1238192..1238684Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1238192..1238684TCONS_00059867-exon-scaffold_331-1575043694:1238192..1238684Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1491911889:1238930..1239571TCONS_00059867-exon-scaffold_331-1491911889:1238930..1239571Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1510915933:1238930..1239571TCONS_00059867-exon-scaffold_331-1510915933:1238930..1239571Clytia hemisphaericaexon
TCONS_00059867-exon-scaffold_331-1575043694:1238930..1239571TCONS_00059867-exon-scaffold_331-1575043694:1238930..1239571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:1221356..1239571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0622788	0.051861	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0893805
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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