TCONS_00060993 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060993
Unique NameTCONS_00060993
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length379

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060993 ID=TCONS_00060993|Name=TCONS_00060993|organism=Clytia hemisphaerica|type=transcript|length=379bp
cagaaaaataaaaaaacaaaatattaaagCACTACTAGAAAGTTATTACA
AAGAAGATGGCGCGTATTGAATGGGCAATGTGGGCCAACGAAAATGCTGT
CATTGCATGTGCAACACTGTTTGTTGGTGGGTTACTTGCAGTGTGCAGTC
TTGCTGATGTTGAGCATGTTCGATGGGAGGTTGGTGCTTACGGAATGGCG
ATTGCTTTGATAATCTTTTTCTTGGAATACCCGAGAGGTAAAAGAACCAG
AGGGAATACTAGACAAAGAAGCATGCAACACATCCCAACGAACTTTGTCG
CCAGCATGGGTTTCTTTGGAAGAAATTATTTTGttcgttttattttatat
tttctGTGTGCAGTGCCAACTGTATTCNT
Run BLAST on NCBI

transcript from alignment at scaffold_352:84134..94667+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060993 ID=TCONS_00060993|Name=TCONS_00060993|organism=Clytia hemisphaerica|type=transcript|length=10534bp|location=Sequence derived from alignment at scaffold_352:84134..94667+ (Clytia hemisphaerica)
cagaaaaataaaaaaacaaaatattaaagCACTACTAGAAAGTTATTACA AAGAAGATGGCGCGTATTGAATGGGCAATGTGGGCCAACGAAAATGCTGT CATTGCATGTGCAAGtaagtctttttttattttattttttgcctCCATAA CTAcgaatggaaatcttttaacaTTAAAGGAAAGAGTGGTCTCGCTGCAT TCCCTTCTCTTGGTGACTAAATAAATTGGGAATTTGTAAACATTAGTTCT CTTTATACTGAGACGAgtaatttagaaaatgagcattatggaggagtgta ctttTCATTCATGTCTaataaataggatctcctccacagatcacatttta taaactactcgtctcagacgatttttccgtctcagtataaatggaactaa TTTTTCCAATAGTTGTGAATACCTAGGTAAAAGACTGATtatagttcgtc caccctcactttaaggtaccgtaagttggtctaatgttgacatccctctt ctaattccaaAACCCAGTTTTAGAGATAAGAATAATAGTAAGGTCAgacg aaagattttttcctctctggTCACAAAGCAAAGAAATATAGTTTCCATAA GCGACTCCGACCTTTCTACtattcctatctttaaagaagggtggcgagat tagatgagggatgtcgacatcaTTAGACCAAGTTAAGGTACTGTATGAAC AGAATTTTTCCAatggttcttttgcaaattttgccattttccacatttag aaaaatgctttttttgcCTTGAAAGGGTTCGTCCACCCCTTGTATGGGAA TTTAACAGAGCAGCTCATTTTACTTACGCGTTGTGCGGAATAATTTTTTG TGAAGTACTTTGAAGTCTGGCCCCTGGTGTAAAACTTAAGATGCTaacaa aattgattattttgaaatatattagATTAATGTCTTGGATGTAATGAAGG GTGAATAAAAATCCTGGCAAGGTGCTCGATACAAAACGagtgttttcttc attttaaaacttattccaatgaaacaaaatgctgaaaacgggattttata ttttgtttttgaataaattttgaaatgattaGTTGTCTTAGATGTAGAAA GTGTTAATGAATTCGGAATACAAATCTTGTTTGACTGTTAGTGGTAAACA TGGTGTGTTTGGATGAATTGTTGAAATCGATAACTGTTGAGGCAGGTGAA ATAAATAGATCTAAACAATAATAGATTTGCAAAGGGAAATTtattagttt caattttcactgattttaaAATCAATCGGATTGATAGAAAAGTTAGGGCA CTGCTTTTCAATTCTCATTGAAAATGCATGCGACCGAACGAAATTTCAGC TCTATAAAACAGTGAAAAAGGAGATTTGATGGTTTTAGTGAAGTTGGTGA GTGTAACCATTATGACCATAAAGTTCTGTATTTTCATCGTATTATCTATT TCGATCTTTTCATGTGACTCAAAGTTGTACGAACAGTTTTCAGATGCTTC AAGCTCAAAAGGAAATGCTGACATTTTCGTAATCGGTTTATTTTCACTTT GTCAAAACGAGACTAATTCCTTTCCCTATTATGaccagaaaaagattttg aattctTATTTACACTTCGAGAGAACTGTCACATTTTATCAAACCATATA CGATGTATCTTTTGGGAAAATTGGTAGCATCTCCTATGATGTTTGCCGCA ATCAAAGTCGCCTTTTGGAGGTTATTGCAGGACTTTCACTAAGTGGTAAA TATTTGCTTGAACCAAGAAATGCTATTCGATTTGCTCATGCTAATTATAT TGCTATCTATGGTTTCTTAACTACACCTCTATTGAAGCTTTCATTGGAGT TATTGTCATGGATAGAGGTACCTTACTTTGTTATCTTACCTGACGATGAA CAAGCGTTTTATCTACCTATCACACGATATCAACATTTAGGAAAAACAGC CATGATTGAGAATAAGGTTATTGAAAGGTTATTTACTTCGTATTACTGGC AAAGTTTTACATTCATTTTGTTAAGTTCGAATGAATTATATGTCAAGAGA GTTGATTATTTGATCGAAAAGCTGATCGCCGAGAAAAGATCTACGTGCAT TGTTAAAATGTTAGCATTCAATCCATCAAAAGTAGACGAGACTGTGCAGT TGTTGGTGAACCAGACTTCACGAAAAGTCATCTACGCGATGGGAAACAGC GTACAAACGGAAATTTTTCTGCAAACTCTCGATCGCTTTAAAGTTTACAA CCGCATCATCTTTCTAGATTCGCGAGCGGTTGGTGTCAAAGTCCCGGACA GGCTTCAGAAGGGTTTATATTTTGTTCCATCTCTTGGgaattagtgaggt taagtataccaggataatcacgacgacggacgaaaaatgtaataggctag tggaaatacaaaatttgattggttgaaactcactagcctgttaaattttc gttcgtcgtcgtgattttaccaatttacttaacctcactattatgCATTC GAATTATACGAAAATGAATCGAAGAGAACGTCTGTTCCGGATAGCTTTCC TTTCCCGGTTTGTAAAAATGGTTTCTTCCGTAATACGGAATTAATGGATT CTAAAGGTGATATCTGTTTGGAGAATTCCAATCTGACACTAGTTCAATGG AATAGACAACAAAACGACACAAGTAGTGTGTCGGAAACTCTATCGCATGC CGTTTTATTTCCCTATTGGCAGTTTTACGAAGCTTCAAGATGGCTACCTA AAATTGAACATTATAACATAACGGATCAGCCTGACCAATTAAGATATATC TCTCGCGGCATCAATCGTAAATTTCGTGAATGGCTACACGGCTCACATTA CATTATTAACATGCAGAAACCAGGTGCTGTTCACACATGCCTCACACACT GGTTTCCATCAACTTGTATCTTTCGTGGGCGTAAATTTCCAGTCACGTGG CCTGGACCCTCGAATGAAATCCCGCGGCAGTATTTGTGTTTCGAGGAAAG AATACTACCAGCAGGGCAAACATTGCAATATGGGGATATTCCTCACAATG AAACACAATGGGATTTAGAATATGGCTACAGACTTGTTAAATGCGCCTTT GGATGGTATAAAGAAAACGCTGAAGACTTTTCTTGTCAGCCTTGTCCTGA AGGGCTGGTATCAAGTCCCGATCGAACTGCTTGTATTGATCAATATACTC GAATCAGTGTTTTTGGTTTCAATACGAAAGAAAGTCTTATTTTTTCGATG CTCATTTTCATGGGATATGTGATCAGCTTATCGTACTGTGTATGTTTGAT CGTTCATCGTAAAACAGCTGTGGTGAAATCTTCGCAGTTCAAATTCACTC TATTACAATTATTGAGTcattttttcgatttcttttgtCTCATGTATGCT TTCGCTTATCACAATGACAACACTGCTTGTATGCTTTTAACTGTCGGTGT TGGCTTCTTACTGTCCTTGAATCTAGCTCTGGCAATTATCAAGACCCAAA TANTGCTTGTATGCTTTTAACTGTCGGTGTTGGCTTCTTACTGTCCTTGA ATCTAGCGCTGGCAATTATCAAAACCCAAATCATCATTGATATATTTTAT GCTAAAACGAAAATTGATCACGAGCAACAGTTGAAACGGAACTATAGAAA CGCTTTTATAATCGGGATAATCGTTTCCGTTTCGGTTTCTTTATCGGTTA TCACCATTGTTTTCCATAATCCCGATGCAATCGGGGAAATAATTAACCAA GACCTCAAATTCGGTTTTTGTGATTTCGGTCATCATCTACAAGTCCAGTT TGGTTATTCGATTATCCTATCCATCATTTGTACTGTTCAAAGTATACGGG CGCGTCATTTACCGGATTTCTTTAAGAGTACCCGGTTTATTGTATACGGT ATGTTTACAAACCTGATGACCATGGTAGTGTTTTACACCGTATATAACAA CCAACGGGGAAACCGGATTGTACAGTTTTATGCGATGGGTTTTGCTGCAG TTTCTTCAAACTATGTTTTATTATTGATCGTTCATACCAATCGGATCCTC AGTATTTTTAATCGGAAACGAAACACACAGGCAGTCGTCAGACGTCAAAT ACGACAGAACATggacaaattgaatgaaaacgTTAAAATCAGAACTCTAC CTCAGCAATGATTTGGACATTCAAATTAGTTATTAAAAATATGATATTGA AAGATATTTAGCGAAAAATAATACTAGCTTTTatcattttgattaatttt ttttgttatcaTTTACAATTACAGTAggctcccggttattcgaaccTGCA CTTATTCGAAGTGAGATGGCGTTCCCCTTGGATCTGCTTACTCAACCCAG GCAAAAACACTCTCGGTTATTCGAACTTCAGTTATTTGaactttcagtta ttcgaagcgGTTTCTATTCCCATGCATTATAGGCTAAATCACACTcagtt attcgaatttttcttattAGGAGATTGTCGAGTGAGAACATTAATTTCTG CGATTGAAATAAttgttttcctttaaaaattagttttcaataTTTATGGC TATAAATCGCTATTCAAGCaatttatttgtgtttattacgcTCATGAACC GCAATGCTTCAATTTCTTCAGGAAAGTCCACCCAATTAAGGTTAAGTTGA GAATCTGGCGGGATAACGAATTTTGCAGTTATTTGAATAACCGGAAGTTT ACCGTAATTCAATAAGCAAAAACTGTTAATTACAACAACCTTACCTTCCA TTTAACACAATAATTTATCCTATTTCAATCCCTAAAGGAAGTTTTGTTCC ACCAACTAGTCATATCTCCcagttgaattttgaattttctaacGTGCATG ACAGTCTCACACAAGCTCTTGTTAACAGAAAATTTGAGCGCGATTCTTTC CAAATTTACCAATGCCGGTTCGACACTGACTCAGCTAGactcaaaaaaag gttttctctATTCCATTCCAAATATCAGCAAAATTCAAAGATTATTTAAT TCGTTATGTAATTCGGTTTTTNTTCCATCCCAAATATCAGCAAAATTCAA AGATTATTTAATTCGTTATgtaattcgattttcatttgGAATTCTTGAGC ACTACACACTCTTTTGCTTTTAtgctcaatttcaagcaatttagagatca aagtagtaaaaactgGGTATAAATACCTCAacaagaacaggataagaaca atttgaggctcaaagtgccaaaaataaTAACAGTATGTATTCCGTAATAT AAACTTTCTTGATTCGTTTCTTTTTTAGCACTGTTTGTTGGTGGGTTACT TGCAGTGTGCAGTCTTGCTGATGTTGAGCATGTTCGATGGGAGGTTGGTG CTTACGGAATGTGAGTGTAGtttattttaaaacttgaaTCTGTCAATATT AGATTAGCCAGCACCTTTTCTACCAAtaaattttctatattttcattGTG TCGGTCAACTCTCACTCTCTaaatcgaatctttctgtaactcGGACTAGA ATATTGGTagcttgaagatcgaattagagagagtcaactttaTACATCGA TAGCCTAgtctatactagacgtcactgcattattatttctacaaaattaa aaatcctGTTATTTGGCGgggttacttgttatctatagCCTGGCATCGTA TAGATTCGACTTTTTCCGTGTGCTGTTGTCCCTCCTGTAGCCTATTACAA ATCTCTCACAAGAAATGATAACCAGATTGAAAATCGCTATATTATAACCA ATACCCAATTTAAGCAAGAACCTGACCTTGTTCCCTCAAGACCTCTTGCT CCTCCCTTGTTTCTTTCAAGtatatgttttatttttcatttccttTAGGG CGATTGCTTTGATAATCTTTTTCTTGGAATACCCGAGAGGTAAAAGAACC AGAGGGAATACTAGACAAAGAAGGTacgaaaacattttattttgtttcac cTGTTAACAATTCAGGAATGTAGTATTTTTCTCAATGATATCGAGGGGGG GAGAAAAGGTCGGGGAGAGTGACAAAAATCTTGGAGGAATACAGAATTTC gcctagactagagtctacttctgactgaactttgtttttgataatttttt atgatgcTGAGTCTATAAGGGGCCCCCGGGCTAAATTTTCCCCTGATGAG GTTTTCTCATGTTCAATTATCTACAAAACAGAACTTTTGGTAAAGTCACT TTTTAAAGCTAAATTTCTTTTGCCCTTTTCTGATAAGATAATAGGtaata ttatttttgaaagtccCTTCCCTTCATCTTCATGGAATGAAATCATTCCG AAAAATAGAATCTAAACTtatacaccctcttctcacagacccactgggat cccttcccactggaaaatttgaccaaaatatcgtccccggtggaaaacta tcctccaatttttgtacccactgaaaataattaaataaagcAATCCTCAC taattttttgttctatttttcccatccccactgaattttcttccttgaaa acaatagaattgaaaccccagccataaaaaatgggtgaatatcaatcccc atcgagttttagtccgtgATTTTTACTGTGAAAAGGGGGCGGTGTAGTTA TGAATAATAAGATTCAGATTtgcaaaatattaaaatctTACTTATCCCAT AATATCTTTTGTGTTTTATTATAGCATGCAACACATCCCAACGAACTTTG TCGCCAGCATGGGTTTCTTTGGAAGAAATTATTTTGttcgttttatttta tattttctgtaagtaactttttttgtatttttttgccACAGATGGTCAAG TGATGAACTCTTAAGTAAACTCTTAAACAAATGAGACTTAATTCTTTTTG AGGTGGAAACGGCGGGATCTAAACACTTTTGATTAACCCTAGTGTTTAAA ATCCATTTAGTAAGTCCGTATATAATCCCGGTCTGGaagctttttgtttc tttccattgtttcttacttgaacttgcgttgagaaattagtttttggacc tacctaaggtagtcctttaaattaacccttgtccgttcgttcgtccgttc gttcgttcgttcgtctgttgccagcttttctcgggatcggctctNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtgcaatatgacaatacctaaaatgtgacggagcc cgattttcgaaaaacatttttttccatccgaaaatgccggaaatatgccg gaaaaaccggttttttgacgttttctcgagattttatcacaagttttttc agattttttgcagaaagatgcgtattcgcaatgctcaaaacatggccgag ttcgatttttgagaaaaaaatttttccggttgaaaatgccggaaatcgcc gtttctGCACCGTTtctgcagattttcattggattttttccttttatttc tatgtttttcactcaaaaacattattgataacaatgctcaccgtcaagca tgattcaattgtcaataaaacagatttttgcgaccagaactttctattaa tttttccctacaaccctcccctctccccccatcatcaatcaatgatgaat ttattgcgttgtgtattttcgctaaacgctatattttctgactgattttt ttcatttttcttttcgcattgctatctaaatttcatcatcaggtaggtcc attcagcatgttgcttgttgatcatgtgattagatttTAATCTATTAcaa gaggagtacttggtaacgtgatcgaaaactgagcaaatcgatttttatat ttttatgttaacAAAGGAAAAGCTCACAAAATGTTAGTACGGActatatg taatagttatcggaacgagtgaaatatttccatattgtatgagcaaatgt ctgataactagtttatcggtgacccaaaaaatgcactttctgtgttggag gacacttttgtagcaaagtgacgttatattgcttctaccgctacaatgca acaacatcttttcgtcaatttatatttttacatgtaaaatacaagatata ttgtactctttttaaccaatcagattgcagatattttttggatcgccgat aaaaacCTATAAAAGAAACGTTTGTTGATATGATATTCTACTCAGCTTGC TTCGTTGAATTTCAatcaagctcgactgaataTCTTCCAATGAACGATTT TTCTTGACGAATATTTGctcaggcgaaaataaaaaaatgtagtgtttccg gaaaccggccgggtgaaaaacaataattttctgacccggccgcagacttc attagtagttgatacattagtattcagggcttacttcatactgtttgtac ataaaagttatctttaaagttctatttcaatgatcttaagttatcaaaaa tagcaaaaaaagtttttttccggccgcatgagagcttttttccttgaccc gcattccggaaacactacatttttttattttcgcctcattgttttatatt ttctctTTAGGTGTGCAGTGCCAACTGTATTCNT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038293XLOC_038293Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060993-exon-scaffold_352-1491911889:84134..84247TCONS_00060993-exon-scaffold_352-1491911889:84134..84247Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1510915933:84134..84247TCONS_00060993-exon-scaffold_352-1510915933:84134..84247Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1575043694:84134..84247TCONS_00060993-exon-scaffold_352-1575043694:84134..84247Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1491911889:89412..89493TCONS_00060993-exon-scaffold_352-1491911889:89412..89493Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1510915933:89412..89493TCONS_00060993-exon-scaffold_352-1510915933:89412..89493Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1575043694:89412..89493TCONS_00060993-exon-scaffold_352-1575043694:89412..89493Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1491911889:89982..90056TCONS_00060993-exon-scaffold_352-1491911889:89982..90056Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1510915933:89982..90056TCONS_00060993-exon-scaffold_352-1510915933:89982..90056Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1575043694:89982..90056TCONS_00060993-exon-scaffold_352-1575043694:89982..90056Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1491911889:90808..90891TCONS_00060993-exon-scaffold_352-1491911889:90808..90891Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1510915933:90808..90891TCONS_00060993-exon-scaffold_352-1510915933:90808..90891Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1575043694:90808..90891TCONS_00060993-exon-scaffold_352-1575043694:90808..90891Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1491911889:94644..94667TCONS_00060993-exon-scaffold_352-1491911889:94644..94667Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1510915933:94644..94667TCONS_00060993-exon-scaffold_352-1510915933:94644..94667Clytia hemisphaericaexon
TCONS_00060993-exon-scaffold_352-1575043694:94644..94667TCONS_00060993-exon-scaffold_352-1575043694:94644..94667Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_352supercontigscaffold_352:84134..94667 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.7988 25.5489 38.2624 44.1131 26.3509 23.1478 9.7047 8.58083 16.7817 17.0475 15.4235 12.894 59.3032 60.5772 12.9047 14.8828 48.8061 65.0833 63.3195 63.3688 66.5635 65.9928 44.3108 54.3091 36.8625 39.7348 44.7519 34.3313 54.373 44.206
Blast
BLAST of TCONS_00060993 vs. Swiss-Prot (Human)
Match: CY24A (Cytochrome b-245 light chain OS=Homo sapiens GN=CYBA PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.080e-22
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 3
Query:   57 MARIEWAMWANENAVIACATLFVGGLLAVCSLADVEHVRWEVGAYGMAIALIIFFLEYPRGKRTRGNTRQRSMQHIPTNFVASMGFFGRNYFVRFILYFLCAVPTVF 377
            M +IEWAMWANE A+ +   L  GG++A          +W  GAY +   + +  LEYPRGKR +G+T +R  Q   T  V   G F RNY+VR +L+ L +VP  F
Sbjct:    1 MGQIEWAMWANEQALASGLILITGGIVATAG----RFTQWYFGAYSIVAGVFVCLLEYPRGKRKKGSTMERWGQKYMTAVVKLFGPFTRNYYVRAVLHLLLSVPAGF 103          
The following BLAST results are available for this feature:
BLAST of TCONS_00060993 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CY24A5.080e-2242.06Cytochrome b-245 light chain OS=Homo sapiens GN=CY... [more]
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