TCONS_00063941 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063941
Unique NameTCONS_00063941
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2381

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063941 ID=TCONS_00063941|Name=TCONS_00063941|organism=Clytia hemisphaerica|type=transcript|length=2381bp
catattttacccCCGACGCGCTAATGTTTACGTCGACATATGACGTAGTT
TCAAAACACTTCCCATAATGCTAAGTACACGTTCACAGAAGCAATCAAAA
TTGCGGAGGCTCTTGTTCAAAACATAACATCAGAAGACGTTGTGAAGTAA
AGAAAGAATCAAGAAGAAGATTCTTTGACCGAATTTTGGATTTCTCCTTT
GGGAtactgatttgattttgtttggcTTGGAACTAATTTAACATGGGCTt
caaatttctTGAAGTTCTAAAACCATTCATATCGGTTTTACCCGAAGTTT
CAAAGCCAGAAAGAAAGATTCAATTCAGAGAGAAGGTATTATGGACAGCC
ATCACTCTCTTTATCTTCTTGGTTTGTTGCCAGATTCCCTTGTTTGGAAT
TATGTCTTCAGATTCTGCTGATCCTTTCTACTGGCTCCGTGTTATTATGG
CATCCAATAGAGGAACTTTGATGGAACTTGGTATTTCACCCATTGTTACA
TCGGGCTTGATCATGCAACTTTTGGCTGGTGCCAAAATTCTTGAAGTTGG
TGACACTCCACGTGACCGTGCTTTATTCAATGGTGCCCAAAAATTGTTTG
GAATGATCATTACAATCGGTCAAGCTATTGTTTACGTTATGACTGGAATG
TATGGTGAACCATCTGATCTTGGAGCTGGTGTTTGTCTTTTGATTATCAT
TCAATTATTCTGTGCTGGTCTCATTGTCTTGCTTCTTGATGAATTATTGC
AAAAAGGATATGGTTTAGGATCTGGTATTTCTCTCTTCATTGCTACCAAC
ATTTGTGAAACAATTGTCTGGAAAGCATTCAGTCCAGCCACTGTCAACAC
CGGAAGAGGTACTGAATTTGAAGGAGCTGTCATTGCTTTGTTCCATCTTC
TTGCAACCAGAACTGACAAAGTCAGAGGTCTTCGTGAAGCTTTCTACAGA
CAAAACCTTCCAAACTTGATGAACTTACTTGCCACAATCTTTGTCTTTGC
TATTGTTATATACTTCCAGGGATTCCGTGTAGATTTACCAATCAAATCAG
CAAGATACAGAGGACAATATAGTTCATATCCAATTAAACTGTTTTACACA
TCAAACATTCCAATCATTTTACAGAGTGCATTGGTATCAAACGTATACAT
CATCTCACAAATGTTATCATCCAAATTTGCTGGTAACTTCTTTGTAAGCC
TTCTTGGTGTATGGAATGAGGCTGGTGGCGCGTCCAGATCATACCCAATT
GGTGGATTATGTTACTACTTGTCTCCACCAGAATCATTGGGAAATATCGT
GGAAGATCCAATCCACGCTTTCATGTACATCTTTTTCATGCTTGGATCAT
GTGCTTTCTTCTCCAAGACATGGATTGATGTCTCTGGCTCATCTGCCAAA
GATGTTGCTAAGCAATTGAAAGACCAACAAATGGTCATGAGAGGTCACCG
TGAAAAATCTATGATTCACGAGTTGAACAGatACATTCCAACAGCTGCTG
CTTTTGGTGGTCTTTGCATTGGAGCTTTATCTGTTTTGGCCGACTTTATG
GGAGCCATTGGATCTGGTACTGGTATCCTTCTTGCCGTCACAATTATTTA
TCAATACTTTGAAATCTTCGTGAAAGAACAGAGCGAACAAGGTGGTATGG
GTACATTGCTTTTCTAAACCTAACCGTAGAAATTTGATGGTACCGTCATC
ACTTATAGCAATTATTTCAACTAAAGCACGTTATTTAgaaacatttttgg
aaattttaaatattattgaaaaaacttatttttgtgTACTTTGAAACGAA
TGGAATTACCGTACCTACACGACGAATACATCATCCCTTGTGAATATTGA
TAAATTTGGATTGTGTAATTTACATAATTTTCTAACTTAGTTTATTATTT
TTGCCTGTTCTATCcaagttcattttttaaaaatggaaGATTTGTCTCTT
TAGAAAGAATTGATATCGTTGACCGACTTTTTACtttgacatttttaggc
tttttgcttttttgatattttccacCACCAGTCAGTGTTTCGAAAAACta
gatttttaaagatttttttacagttttaggggacaaatttcttttatttg
aatttaaagGTGCCCACTTGTAAAATAATTTGTCATTCTGTGTTGTTCTG
AAAATGACATTTAATTTATCATTTATGGAAGAAGAAAAACCAAATGAAAC
TTTTTCTGCATTTTCAGGTTATCCTATCTTAAGCCCACCCTTCCCCTCCT
AATGAAATTCAACTAAACAAGCCATCccattggctaaaagcaaaaacata
aacaaaaaaatgtccagAGTAAGAGCACAGAAAGCACATTTTTCTCATAC
TCTgtaggtcctttaaattaacccaagTCCG
Run BLAST on NCBI

transcript from alignment at scaffold_404:554250..560406-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063941 ID=TCONS_00063941|Name=TCONS_00063941|organism=Clytia hemisphaerica|type=transcript|length=6157bp|location=Sequence derived from alignment at scaffold_404:554250..560406- (Clytia hemisphaerica)
CATATTTTACCCCCGACGCGCTAATGTTTACGTCGACATATGACGTAGTT
TCAAAACACTTCCCATAATGCTAAGTACACGTTCACAGAAGCAATCAAAA
TTGCGGAGGCTCTTGTTCAAAACATAACATCAGAAGACGTTGTGAAGTAA
AGAAAGAATCAAGAAGAAGATTCTTTGACCGAATTTTGGATTTCTCCTTT
GGGATACTGATTTGATTTTGTTTGGCTTGGAACTAATTTAACATGGGCTG
TAAGTTTTCACATTTATATTGTCTGACTATCCTTCAAAAGGGTACATGAA
TCACTGATTATTTTTGAATGAAAATATTGTATTTTTTTTGTGATAAATAT
TTTTTGTAATGTTGACATAGAAAGCTAACTTTATATCATTTTTATTTTTA
GTCAAATTTCTTGAAGTTCTAAAACCATTCATATCGGTTTTACCCGAAGT
TTCAAAGCCAGAAAGAAAGGTTTGTTAATTTTTATCATTATGTTTATATT
ACCTTTCCCTTATAAAAATCCAGTCAGTAAAAAGGGTAATACGCGTGCCA
GATAATTTTTGGCGTAGCCTTGAATCAGGTCTTTGAGATTGCCAACTGTT
GTGTATAAATTTGTAGGGAAGGTAAACAAACGTATGTCTTTGTCTGTGAG
TGAGGGATTAGGCGTAAATCAATAATATGTTCCGTTTGCGTCATAAAACA
TTCACGTCAGTGAATTTCAAGTTGATAATTTCAATGAGGGTGGACGGAAA
AAAACTCAAATGGGGCTCAATGTGGGTAAAGTAAATAAAAACTTTGAATG
AAGCGAATGGTGATGTAGAAAAGGCCCAAGGGCTTAGCTATTGAAAAAAT
TTTCCAACATTATTGCGACTGGGCGGACTTGGGATTTATGTTTTGAAGGT
AAGTTGGGCGACGCGAACAGAACATATTATTGATGGTCGCCTTAGGGAAA
GTTAGGTTTTCAACTGATAAACTTTTAAAGTTGATCTTTGTTTGAGAAAA
AATTTCAGGAAATGATAATTTGAGATCTGCTATCAGGTTATTGCTAAGCT
TTTCCAATGTCAAAAGACTTTCAATGTCATTTTCAAATCTCAAAGTGGAT
AAAAAAAGTTAAAGCTCGACGTTGCAGATAAATAGACTGAGGTTGTTTTC
AAAGAAGTCTACTTTTTGTTGGTAACTTGTATGTGGACAATTTCATTTAT
ATACAATTGCTTTTCAGAATAGGATGTAAGCAAGTTTTTATCTCCAAATT
ACCTGAAAATGAAAAAGCTGGTTATCTCTTTAAGTTCTAAAGGGACAAAA
TTTTCTTGAAAGCAACTTTTTAACAAATACTGTAAGTTGGTCTAATGTCG
ACATCCCTCTTCTTATTTTGTCACCTTTTTTTAGCGATAGGAATAATAGG
AAGGTCGGAATCACTGATTGAAATAATTTTCTTTGCTTAGCAATCAGTCA
ACCTTCCTATTACTCCCATCTCTAAAGAGGGATGTCGAAATTAGAAGAGG
GATGTTGACATTAAACCAACTTACGGTAATTTTGCTGGATAATTTAGGTT
AACATCAAATTTTGCAAGTTTTTACCATTCTATCAAATTTACCCAAATTG
TACCTAAGAAAGCTCACATTACCTTAATTCCTGTGAATTTTGTGTTCCTT
TTCTTATTTTGCACCCTCAATACACCCTTCACAATTTTGTAACTTTTGCT
ACCTTGCACCATTTGAGGGTCAAGCATAAAGGTTGTTTATTGGAAATTTG
GTTGCATGATTTTAAAGCTCTAAAACCATTACGTTTTTCTTTTGCTTTAA
CAGATTCAATTCAGAGAGAAGGTATTATGGACAGCCATCACTCTCTTTAT
CTTCTTGGTTTGTTGCCAGGTATATTTTTAGCTTACTTAATTTTTATTTA
AACTGTTTTGTCATCCAACTTAAAAACATTGAATTTTAGTCCAACTGAAG
GTTACGTTGCACTAGGAATTCACTTCCTTGTGGGATAATTGCTAATTGAT
GATGTGTTATACATTTTAATTATACATAACTAATTATTCAACCAATTTGA
TAACTGTGTTTTTAATGAGCCAATGGTTATTTGGGGCAATGAATTAATGA
AAGTTTATTTCTTCTAGATTCCCTTGTTTGGAATTATGTCTTCAGATTCT
GCTGATCCTTTCTACTGGCTCCGTGTTATTATGGCATCCAATAGAGGAAC
TTTGATGGAACTTGGTATTTCACCCATTGTTACATCGGGCTTGATCATGC
AACTTTTGGCTGGTGCCAAAATTCTTGAAGTTGGTGACACTCCACGTGAC
CGTGCTTTATTCAATGGTGCCCAAAAATTGTTTGGAATGATCATTACAAT
CGGTCAAGCTATTGTTTACGTTATGACTGGAATGTATGGTGAACCATCTG
ATCTTGGAGCTGGTGTTTGTCTTTTGATTATCATTCAATTATTCTGTGCT
GGTCTCATTGTCTTGCTTCTTGATGAATTATTGCAAAAAGGATATGGTTT
AGGATCTGGTATTTCTCTCTTCATTGCTACCAACATTTGTGAAACAATTG
TCTGGAAAGCATTCAGTCCAGCCACTGTCAACACCGGAAGAGGTAATTTT
GATATTTGAAACTCATATTATTTGTATTTTAACTTTTGAGAAATTGATTG
GTATAAAAGCTAGCTGACAAACCATCTGTTTTAATTGGTCCAACCCTAAT
TCTCAAAAGCTAAGTCAGCATCTGCTAGAGACCACAAGGGGACTTTTTAG
CTTATTCTTCACAAAATTTACTACTATGTTAAAATGCACTACATGTTTTG
GTCTTTGTAGGTACTGAATTTGAAGGAGCTGTCATTGCTTTGTTCCATCT
TCTTGCAACCAGAACTGACAAAGTCAGAGGTCTTCGTGAAGCTTTCTACA
GACAAAACCTTCCAAACTTGATGAACTTACTTGCCACAATCTTTGTCTTT
GCTATTGTTATATACTTCCAGGTAAGGAAATCAAACATTCAGAAAGAAAT
GTAGTAGATAATTGTAAATATAAAATTACACTTCTAGTAAACCAAGAAGC
TGGTGGAGATTTCGCTGATATCTTTGTTCTTTACTGAACTTGGTTTTGTA
AATCTTTAGGTTTGAAGATTTTTCACGTCAATTTACCTTAACTTTTTAGG
GATTCCGTGTAGATTTACCAATCAAATCAGCAAGATACAGAGGACAATAT
AGTTCATATCCAATTAAACTGTTTTACACATCAAACATTCCAATCATTTT
ACAGGTAAGACAGTCTTAAGTGCTTAATTGTCTATTGTAGCCTACATGTA
GTAATATCGTTGTTTTTTATTTCAAATTCTGATGTCACATGTCTTTTAAC
CAATGAAAATTATCTTAGAAAAAATTTACTTTATTTTTGACTTTTATTAT
ATTTTTTGTGACATTCATCTGTAATTTTTTTCTTTTCATTTAAAGAGTGC
ATTGGTATCAAACGTATACATCATCTCACAAATGTTATCATCCAAATTTG
CTGGTAACTTCTTTGTAAGCCTTCTTGGTGTATGGAATGAGGCTGGTGGC
GCGTCCAGATCATACCCAATTGGTGGATTATGTTACTACTTGTCTCCACC
AGAATCATTGGGAAATATCGTGGAAGATCCAATCCACGCTTTCATGTACA
TCTTTTTCATGCTTGGATCATGTGCTTTCTTCTCCAAGACATGGATTGAT
GTCTCTGGCTCATCTGCCAAAGATGTTGCTAAGCAATTGAAAGACCAACA
AATGGTCATGAGAGGTCACCGTGAAAAATCTATGATTCACGAGTTGAACA
GGTTAGCTTTTTACATTTAAAACCCATACTAGTACAGGCAATAGCATGAT
ATTAAATGAAGCTCTTTAGAAAACTACATTTCTATGCAAGTTTGTTTAAT
GCTCTTCTTTATAAAATCGAAGTTTCAAAAACTCCTTATATCTCACCTAT
TTCTTTCCTCTCAACACTATTTACTATTTTGTTTTGTTTTTTAGATACAT
TCCAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGGAGCTTTATCTGTTT
TGGCCGACTTTATGGGAGCCATTGGATCTGGTACTGGTATCCTTCTTGCT
GTCACAATTATTTATCAATACTTTGAAATCTTCGTGAAAGAACAGAGCGA
ACAAGGTGGTATGGGTACATTGCTTTTCTAAACCTAACCGTAGAAATTTG
ATGGTACCGTCATCACTTATAGCAATTATTTCAACTAAAGCACGTTATTT
AGAAACATTTTTGGAAATTTTAAATATTATTGAAAAAACTTATTTTTGTG
TACTTTGAAACGAATGGAATTACCGTACCTACACGACGAATACATCATCC
CTTGTGAATATTGATAAATTTGGATTGTGTAATTTACATAATTTTCTAAC
TTAGTTTATTATTTTTGCCTGTTCTATCCAAGTTCATTTTTTAAAAATGG
AAGATTTGTCNTAGTTCATATCCAATTAAACTGTTTTACACATCAAACAT
TCCAATCATTTTACAGGTAAGACAGTCTTAAGTGCTTAATTGTCTATTGT
AGCCTACATGTAGTAATATCGTTGTTTTTTATTTCAAATTCTGATGTCAC
ATGTCTTTTAACCAATGAAAATTATCTTAGAAAAAATTTACTTTATTTTT
GACTTTTATTATATTTTTTGTGACATTCATCTGTAATTTTTTTCTTTTCA
TTTAAAGAGTGCATTGGTATCAAACGTATACATCATCTCACAAATGTTAT
CATCCAAATTCGCTGGTAACTTCTTTGTAAGCCTTCTTGGTGTATGGAAT
GAGGCTGGTGGCGCGTCCAGATCATACCCAATTGGTGGATTATGTTACTA
CTTGTCTCCACCAGAATCATTGGGAAATATCGTGGAAGATCCAATCCACG
CTTTCATGTACATCTTTTTCATGCTTGGATCATGTGCTTTCTTCTCCAAG
ACATGGATTGATGTCTCTGGCTCATCTGCCAAAGATGTTGCCAAGCAATT
GAAAGACCAACAAATGGTCATGAGAGGTCACCGTGAAAAATCTATGATTC
ACGAGTTGAACAGGTTAGCTTTTTACATTTAAAACCCATACTAGTACAGG
CAATAGCATGATATTAAATGAAGCTCTTTAGAAAACTACATTTCTATGCA
AGTTTGTTTAATGCTCTTCTTTATAAAATCGAAGTTTCAAAAACTCCTTA
TATCTCACCTATTTCTTTCCTCTCAACACTATTTACTATTTTGTTTTGTT
TTTTAGATACATTCCAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGGAG
CTTTATCTGTTTTGGCCGACTTTATGGGAGCCATTGGATCTGGTACTGGT
ATCCTTCTTGCCGTCACAATTATTTATCAATACTTTGAAATCTTCGTGAA
AGAACAGAGCGAACAAGGTGGTATGGGTACATTGCTTTTCTAAACCTAAC
CGTAGAAATTTGATGGTACCGTCATCACTTATAGCAATTATTTCAACTAA
AGCACGTTATTTAGAAACATTTTTGGAAATTTTAAATATTATTGAAAAAA
CTTATTTTTGTGTACTTTGAAACGAATGGAATTACCGTACCTACACGACG
AATACATCATCCCTTGTGAATATTGATAAATTTGGATTGTGTAATTTACA
TAATTTTCTAACTTAGTTTATTATTTTTGCCTGTTCTATCCAAGTTCATT
TTTTAAAAATGGAAGATTTGTCTCTTTAGAAAGAATTGATATCGTTGACC
GACTTTTTACTTTGACATTTTTAGGCTTTTTGCTTTTTTGATATTTTCCA
CCACCAGTCAGTGTTTCGAAAAACTAGATTTTTAAAGATTTTTTTACAGT
TTTAGGGGACAAATTTCTTTTATTTGAATTTAAAGGTGCCCACTTGTAAA
ATAATTTGTCATTCTGTGTTGTTCTGAAAATGACATTTAATTTATCATTT
ATGGAAGAAGAAAAACCAAATGAAACTTTTTCTGCATTTTCAGGTTATCC
TATCTTAAGCCCACCCTTCCCCTCCTAATGAAATTCAACTAAACAAGCCA
TCCCATTGGCTAAAAGCAAAAACATAAACAAAAAAATGTCCAGAGTAAGA
GCACAGAAAGCACATTTTTCTCATACTCTGTAGGTCCTTTAAATTAACCC
AAGTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040077XLOC_040077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063941-exon-scaffold_404-1575043694:560158..560406TCONS_00063941-exon-scaffold_404-1575043694:560158..560406Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:559938..560005TCONS_00063941-exon-scaffold_404-1575043694:559938..560005Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:558538..558603TCONS_00063941-exon-scaffold_404-1575043694:558538..558603Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:557815..558289TCONS_00063941-exon-scaffold_404-1575043694:557815..558289Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:557436..557596TCONS_00063941-exon-scaffold_404-1575043694:557436..557596Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:557153..557257TCONS_00063941-exon-scaffold_404-1575043694:557153..557257Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:556643..556961TCONS_00063941-exon-scaffold_404-1575043694:556643..556961Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:555344..555380TCONS_00063941-exon-scaffold_404-1575043694:555344..555380Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1575043694:554250..555150TCONS_00063941-exon-scaffold_404-1575043694:554250..555150Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:560158..560406TCONS_00063941-exon-scaffold_404-1510915933:560158..560406Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:559938..560005TCONS_00063941-exon-scaffold_404-1510915933:559938..560005Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:558538..558603TCONS_00063941-exon-scaffold_404-1510915933:558538..558603Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:557815..558289TCONS_00063941-exon-scaffold_404-1510915933:557815..558289Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:557436..557596TCONS_00063941-exon-scaffold_404-1510915933:557436..557596Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:557153..557257TCONS_00063941-exon-scaffold_404-1510915933:557153..557257Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:556643..556961TCONS_00063941-exon-scaffold_404-1510915933:556643..556961Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:555344..555380TCONS_00063941-exon-scaffold_404-1510915933:555344..555380Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1510915933:554250..555150TCONS_00063941-exon-scaffold_404-1510915933:554250..555150Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:560158..560406TCONS_00063941-exon-scaffold_404-1491911889:560158..560406Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:559938..560005TCONS_00063941-exon-scaffold_404-1491911889:559938..560005Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:558538..558603TCONS_00063941-exon-scaffold_404-1491911889:558538..558603Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:557815..558289TCONS_00063941-exon-scaffold_404-1491911889:557815..558289Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:557436..557596TCONS_00063941-exon-scaffold_404-1491911889:557436..557596Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:557153..557257TCONS_00063941-exon-scaffold_404-1491911889:557153..557257Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:556643..556961TCONS_00063941-exon-scaffold_404-1491911889:556643..556961Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:555344..555380TCONS_00063941-exon-scaffold_404-1491911889:555344..555380Clytia hemisphaericaexon
TCONS_00063941-exon-scaffold_404-1491911889:554250..555150TCONS_00063941-exon-scaffold_404-1491911889:554250..555150Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:554250..560406 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	15.1733	19.7114	33.3672	0.276036	33.1957	42.4709	19.2819	22.926	14.638	13.4922	0	0	0	0	0	0	0	0	0	0	53.3562	66.7928	0	0	0	0
Blast
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BLAST of TCONS_00063941 vs. Swiss-Prot (Human)
Match: S61A2 (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 854.358 bits (2206), Expect = 0.000e+0
Identity = 420/476 (88.24%), Postives = 453/476 (95.17%), Query Frame = 3 
Query:  243 MGFKFLEVLKPFISVLPEVSKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWLRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKILEVGDTPRDRALFNGAQKLFGMIITIGQAIVYVMTGMYGEPSDLGAGVCLLIIIQLFCAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRTDKVRGLREAFYRQNLPNLMNLLATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNVYIISQMLSSKFAGNFFVSLLGVWNE--AGGASRSYPIGGLCYYLSPPESLGNIVEDPIHAFMYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKDQQMVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVLADFMGAIGSGTGILLAVTIIYQYFEIFVKEQSEQGGMGTLLF 1664
            MG KFLEV+KPF +VLPE+ KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW+RVI+ASNRGTLMELGISPIVTSGLIMQLLAGAKI+EVGDTP+DRALFNGAQKLFGMIITIGQAIVYVMTGMYG+P+++GAG+CLLIIIQLF AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSP T+NTGRGTEFEGAVIALFHLLATRTDKVR LREAFYRQNLPNLMNL+AT+FVFA+VIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN+Y+ISQMLS +F+GNF V+LLG W +   GG +RSYP+GGLCYYLSPPES+G I EDP+H  +YI FMLGSCAFFSKTWI+VSGSSAKDVAKQLK+QQMVMRGHR+ SM+HELNRYIPTAAAFGGLCIGALSVLADF+GAIGSGTGILLAVTIIYQYFEIFVKEQ+E GGMG L F
Sbjct:    1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 476
The following BLAST results are available for this feature:
BLAST of TCONS_00063941 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S61A20.000e+088.24Protein transport protein Sec61 subunit alpha isof... [more]
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