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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063899 ID=TCONS_00063899|Name=TCONS_00063899|organism=Clytia hemisphaerica|type=transcript|length=1569bp
TTTTGATCAATGAAATAAGAACTCTTACAAGCCACTATTTGACATACACA
AATATTTAAGGTTGTGAATCGTTCGGTCGACGCTCTCACACTGCTGTTGG
TGGACCTTTAAGAATTGAAAGATACACTTTGCTCCTGAGTTAACGAACAA
GCTCGTCTTTTgtcgtttgaaattttttgaagccattgaagaaactttca
cttgcaaggttttttttcaatatctcTTGGAAATCAAAGAAGAACAAACA
TGGCAATAATgaaattaattattttgttGTCGATCGTTTCATTGGCTTAT
ACGCTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACTG
TAAAGGAGAAACTGTAATGGATCAGTGTGGATGTTGTCAAGTTTGTGGAG
GTACAGAAGGGGAAGCTTGTGGAGGGCCATGGCTACTAAAGAGATGCGTC
AAAGGTTTGATGTGCTCCTACAAGGCCGAAAACAGGGAAGTCAAGTTGGA
CGAAGTCGGAGTTTGCACGCCACTTCCAAGACGTGATAGAGCAGCACACC
GTTGGGTAATGAAAGGCAAGAAATTCTTAAAAGCAGTGTTGAAGAGTAAA
CGTCTtgtcaaaagatttttctttgcttCAAAGAAACGCTCATAAAGGGG
TAGCCTCTTGAGAACAGTAGTGGTAGATGGTTGTAGGCCCTGATATCAGC
AGGAACAACTGTAAAGCTTTTCATCAAAGGAAATGAAACGGTATACATCG
ACATTCAGATGCTGTCGTCTTGCTGTCATGGCAAGGTTGATTAACACTGG
AAAGCTGGGGCGTAGAAACAGAGCAACAATGTCTTCAAATTAACAAAACA
CTAAAGCATTGACGCGCATTATTAACTTCAAAATAGTGTTGACAATCAAC
AATAATGGCTGCTGTTGAGTTGCTGGTTTTCAAAATGGTGGCTCTTTGTG
GTATCAAAACAATGAATTTACCATGACGCACACGTCAACTTAGCAGTAGG
CCTCCATGAATGGTTTTTTGTAAGCTGTGGCGTGTTTGTTGAAAGATTGG
TTGTAAATAGCTTATCTtctaaaaacaacaacaatataAAGAATGTACTC
TGTGGTGGACAAACACACGCAGTTTATTACGTAGTTTTGGTAAGCTACCT
TCCATCTTATTTTCACAAGGTTTGAAGTGAAAATATTCCAAAGGACagaa
ataatttgaatgttTTCCCTTAGAAGGAGCCACTTCATTTTGGGATGACA
GTCCGCCAACGTAATATATTCAAGTTCTTAAGTATAAATATAGTAACACG
TTTTTATctcaaaaactattttaaacATATCATCAACACTTGCTTTTTGG
GCAAAAATGTTACATTGTGTCTGGTTTTGCTTTATTTATAGCAATCTCGT
TTAATCTTTCTCAAGTGTACAGATTTATTTCTCAAGTACTTTTTACAGAG
CTCCCACTTTTCCACTCAGACAGTCTTGCATAATTCTGATTGTACTTTTG
ACTATCAAATGCGTAAATTGGATAAGTACCAATGCTATTGTTCGAGGTAT
GACCCAAACTATCTTGCGA Run BLAST on NCBI protein sequence of TCONS_00063899-protein >TCONS_00063899-protein ID=TCONS_00063899-protein|Name=TCONS_00063899-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
MAIMKLIILLSIVSLAYTLSCKCNKDKCKAPTDCKGETVMDQCGCCQVCG
GTEGEACGGPWLLKRCVKGLMCSYKAENREVKLDEVGVCTPLPRRDRAAH
RWVMKGKKFLKAVLKSKRLVKRFFFASKKRS Run BLAST on NCBI transcript from alignment at scaffold_404:693566..698062+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063899 ID=TCONS_00063899|Name=TCONS_00063899|organism=Clytia hemisphaerica|type=transcript|length=4497bp|location=Sequence derived from alignment at scaffold_404:693566..698062+ (Clytia hemisphaerica)
TTTTGATCAATGAAATAAGAACTCTTACAAGCCACTATTTGACATACACA
AATATTTAAGGTTGTGAATCGTTCGGTCGACGCTCTCACACTGCTGTTGG
TGGACCTTTAAGAATTGAAAGATACACTTTGCTCCTGAGTTAACGAACAA
GCTCGTCTTTTgtcgtttgaaattttttgaagccattgaagaaactttca
cttgcaaggttttttttcaatatctcTTGGAAATCAAAGAAGAACAAACA
TGGCAATAATgaaattaattattttgttGTCGATCGTTTCATTGGCTTAT
ACGCTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACTG
TAAAGGTAAGATCATTGTTTTCTTATTCCTTATCATTCACCGTCATTCTT
GGCGCTCCTTCAAAGTCTACGACCCTACGATCGACTCACTTGTCCAAGAA
ATTTcagcttaaaggttttgtttttacataagtattcccgtttcatatca
gacacatatttcatatcaggaaagTGTCTTgcttttgttatattatgctg
atataagcaaaaagaatgtttttcttttcctctttctgaccaatcttgct
ccacgtccgtgtcaatccaatgtgaaaaacaaaacctttaaatggtCCTA
TTGCAGAAAGGTCGAGAAATAACTGCACAATTTTAGGGTATGCTTGCTGT
AAGGacttaataaaataaaactacGGAAAGTATTTTTTATAACAGAAAAT
TGAGAATAGAATACTTACATCTTATGTGCATAACGGCCGGAGACCGGGGA
GTAAAAGTGACATGAATAAAAGCTAACAgtcatttacacgtttttttttt
tataagaacgtcgaaaatttttgaagccttccgatgttctaaactttttg
agttttaagcctaaaaatgttcttaaaattttcttattttcaccattttg
tgagtatttttgtgcaatttcctaaaaaattgggtgttttcgagtccaca
aagccttaaaatgttcttaacatgttcttaatatttcggccatcgaagcc
ttatgttcttatatactttgttcttataaaaaaaaaaacgtgtaatctgA
CAGGTTCAATTTCCTATTCGCTGATTCTCATGTTTATCGAAGGTTCGAAG
GTTGAACGATGAGAGATAATTGGGATCAcataggttttttttttatattt
tcagaaaTGAATACATACGCGCCTGCAAAGTGTAATCATTAAACGTAACT
TCTACCTAGGAAGAACAACTTTCCACAtaactttttacaaagcatAATTT
GTGCGCTTGCTTCGAACATCATCAAGCCATGTTAGTTATTATCTTGAGCC
GATCTTTAATATATCAGCTATAGTCTAAATCTGCctgctgaactttgctt
tttaataaattttgataacgCCGAGTTCAAtgaagtactctcgggtacct
aatagctgggggggggttggaataagcgggggggttggaaaaaatttcaa
aacttaataagcgggggggttggaataaaaatgtcctgggtggaaaattt
ttgaaaaggaggctaatacagctgaattaggacaaaaaaaatgaaatttt
aaaaacattttcccaaaaattaataagcgggggggttggaataagaatgt
cctgggtggaaaattttcgaaaaattaattagcggggggacggctattaa
gtacccgagagtaatcgAGTCATCCGGTCTATCAGAAAGCCTTAAGTAAC
CTCTAGGCTAACATCATCCTCAACCAGAGTGATTCGTCCCTGGGTACGAG
ACTGACCAAGTCAAatacatttctattttctcaTATCATTTTattatatc
aaactttaaagtATTCGTCTTCGGTATCAGCCTCCATTAACATGCATTCC
TTTATTTCTAATCTTTGAAGAGGGGAGAGAAAAATTATCCTCTAACACTC
TGAAAAGAAACATTATACATATTACATTATTTaggaagaaaagacacttt
ttattctgctactggtAGTTTCACGCCATTTTGGGAACAATCTTCAGGCA
ACAGTAGCAggccagtagcagaataaaaagtgtcttttcttcctgactGA
CATAGCTCTGCTTATGTATTGAGCACtgtaaaaaaatgaagaaatactAT
CTTACATTAATAATTTTTGATgctaatttatttttatttgaatcttttga
CTCGATAGCGGTATTCAcatcgagtttaaagcccaaagagctagagtaga
atctctaacctttcccagtcaagaaaaagtgaagccacttatttcccatc
cagaacgcgcctagaacgcgccgcaaAGCCGCAATCATGaagacggattg
tatctagtgattacattgtttttgaggactgcattttctgaaatctagcg
atagattttagtttcaatccggtgtttgtgtgaaaaccacgcacgggcgt
tctggatgagaaataagtggtttcatttcccatccaggagtctcgagtct
agcccttcgggcttggaagtcaatgggcATTCAGTTTAAAagcccgaagg
ggctagagatgaaatggtttccttttTCGGTTGGAAACGAAGTCACTTAA
TTCCAAACCGAAATGTGTGACATATGTACGTGGTTTTCAGACAAGCGCTT
tttataaagattaaaaaaaaattatcactaAATTTTGGGAAATAGGGCAT
GTGGAAAGTTAGCAAGAAAGCCAGATTCAACTCGTCATTCCAAAAGTGGC
GCAATTCTTATGGCTTCACTAATCAGTAATCAGTGTTTATTTCATAAAAg
ttaatcaatcaatcaacccaACAATGAATTTGAGactgaaaaattgaata
tcgcaATCAagcaaatttaaactaaatCAATGTGTCTCTCAGATAAACAG
CATCTTTAAAGCATAGATATACTGCCGATATAAATAAACAGGAATCTTTA
TAAACTCACGGACGCCAACTGGGTACCATTAATTGATAAACTTAATCTAA
ATATCTTACTCTTTCCTCCCATAGGAGAAACTGTAATGGATCAGTGTGGA
TGTTGTCAAGTTTGTGGAGGTACAGAAGGGGAAGCTTGTGGAGGGCCATG
GCTACTAAAGAGATGCGTCAAAGGTTTGATGTGCTCCTACAAGGCCGAAA
ACAGGGAAGTCAAGTTGGACGAAGTCGGAGTTTGCAGTAAGTTGATTTTC
CTTTtggttcttaattttttttttagaagaatTTACATAATTACAACTGA
GGTTTGAAACATTTATCCAGGaatttacttttaaaaagaCTTACTGAAAC
CACCCTGGAGGTTTGCATTTTGTAGCCAATTTTACTCACGGTATGATAGA
GAAAGgcattttgacaaaaaataaatgCACATCATCATAAACAAATTTTG
AGATCCTGTATCAAAATGTTAATACGCAATATCCCCTCTTTTTAGCGCCA
CTTCCAAGACGTGATAGAGCAGCACACCGTTGGGTAATGAAAGGCAAGAA
ATTCTTAAAAGCAGTGTTGAAGAGTAAACGTCTtgtcaaaagatttttct
ttgcttCAAAGAAACGCTCATAAAGGGGTAGCCTCTTGAGAACAGTAGTG
GTAGATGGTTGTAGGCCCTGATATCAGCAGGAACAACTGTAAAGCTTTTC
ATCAAAGGAAATGAAACGGTATACATCGACATTCAGATGCTGTCGTCTTG
CTGTCATGGCAAGGTTGATTAACACTGGAAAGCTGGGGCGTAGAAACAGA
GCAACAATGTCTTCAAATTAACAAAACACTAAAGCATTGACGCGCATTAT
TAACTTCAAAATAGTGTTGACAATCAACAATAATGGCTGCTGTTGAGTTG
CTGGTTTTCAAAATGGTGGCTCTTTGTGGTATCAAAACAATGAATTTACC
ATGACGCACACGTCAACTTAGCAGTAGGCCTCCATGAATGGTTTTTTGTA
AGCTGTGGCGTGTTTGTTGAAAGATTGGTTGTAAATAGCTTATCTtctaa
aaacaacaacaatataAAGAATGTACTCTGTGGTGGACAAACACACGCAG
TTTATTACGTAGTTTTGGTAAGCTACCTTCCATCTTATTTTCACAAGGTT
TGAAGTGAAAATATTCCAAAGGACagaaataatttgaatgttTTCCCTTA
GAAGGAGCCACTTCATTTTGGGATGACAGTCCGCCAACGTAATATATTCA
AGTTCTTAAGTATAAATATAGTAACACGTTTTTATctcaaaaactatttt
aaacATATCATCAACACTTGCTTTTTGGGCAAAAATGTTACATTGTGTCT
GGTTTTGCTTTATTTATAGCAATCTCGTTTAATCTTTCTCAAGTGTACAG
ATTTATTTCTCAAGTACTTTTTACAGAGCTCCCACTTTTCCACTCAGACA
GTCTTGCATAATTCTGATTGTACTTTTGACTATCAAATGCGTAAATTGGA
TAAGTACCAATGCTATTGTTCGAGGTATGACCCAAACTATCTTGCGA Coding sequence (CDS) from alignment at scaffold_404:693566..698062+ >TCONS_00063899 ID=TCONS_00063899|Name=TCONS_00063899|organism=Clytia hemisphaerica|type=CDS|length=1188bp|location=Sequence derived from alignment at scaffold_404:693566..698062+ (Clytia hemisphaerica)
ATGGCAATAATgaaattaattattttgttGTCGATCGTTTCATTGGCTTA
TACGCTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACT
GTAAAGGAGAAACTGTAATGGATCAGTGTGGATGTTGTCAAGTTTGTGGA
GGTACAGAAGGGGAAGCTTGTGGAGGGCCATGGCTACTAAAGAGATGCGT
CAAAGGTTTGATGTGCTCCTACAAGGCCGAAAACAGGGAAGTCAAGTTGG
ACGAAGTCGGAGTTTGCACGCCACTTCCAAGACGTGATAGAGCAGCACAC
CGTTGGGTAATGAAAGGCAAGAAATTCTTAAAAGCAGTGTTGAAGAGTAA
ACGTCTtgtcaaaagatttttctttgcttCAAAGAAACGCTCATAAATGG
CAATAATgaaattaattattttgttGTCGATCGTTTCATTGGCTTATACG
CTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACTGTAA
AGGAGAAACTGTAATGGATCAGTGTGGATGTTGTCAAGTTTGTGGAGGTA
CAGAAGGGGAAGCTTGTGGAGGGCCATGGCTACTAAAGAGATGCGTCAAA
GGTTTGATGTGCTCCTACAAGGCCGAAAACAGGGAAGTCAAGTTGGACGA
AGTCGGAGTTTGCACGCCACTTCCAAGACGTGATAGAGCAGCACACCGTT
GGGTAATGAAAGGCAAGAAATTCTTAAAAGCAGTGTTGAAGAGTAAACGT
CTtgtcaaaagatttttctttgcttCAAAGAAACGCTCATAAATGGCAAT
AATgaaattaattattttgttGTCGATCGTTTCATTGGCTTATACGCTGT
CTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACTGTAAAGGA
GAAACTGTAATGGATCAGTGTGGATGTTGTCAAGTTTGTGGAGGTACAGA
AGGGGAAGCTTGTGGAGGGCCATGGCTACTAAAGAGATGCGTCAAAGGTT
TGATGTGCTCCTACAAGGCCGAAAACAGGGAAGTCAAGTTGGACGAAGTC
GGAGTTTGCACGCCACTTCCAAGACGTGATAGAGCAGCACACCGTTGGGT
AATGAAAGGCAAGAAATTCTTAAAAGCAGTGTTGAAGAGTAAACGTCTtg
tcaaaagatttttctttgcttCAAAGAAACGCTCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063899-exon-scaffold_404-1491911889:693566..693920 | TCONS_00063899-exon-scaffold_404-1491911889:693566..693920 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1510915933:693566..693920 | TCONS_00063899-exon-scaffold_404-1510915933:693566..693920 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1575043694:693566..693920 | TCONS_00063899-exon-scaffold_404-1575043694:693566..693920 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1491911889:696590..696751 | TCONS_00063899-exon-scaffold_404-1491911889:696590..696751 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1510915933:696590..696751 | TCONS_00063899-exon-scaffold_404-1510915933:696590..696751 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1575043694:696590..696751 | TCONS_00063899-exon-scaffold_404-1575043694:696590..696751 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1491911889:697011..698062 | TCONS_00063899-exon-scaffold_404-1491911889:697011..698062 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1510915933:697011..698062 | TCONS_00063899-exon-scaffold_404-1510915933:697011..698062 | Clytia hemisphaerica | exon |
| TCONS_00063899-exon-scaffold_404-1575043694:697011..698062 | TCONS_00063899-exon-scaffold_404-1575043694:697011..698062 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:693566..698062 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001558 | regulation of cell growth |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005520 | insulin-like growth factor binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0001558 |
regulation of cell growth |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0005520 |
insulin-like growth factor binding |
Blast
The following BLAST results are available for this feature:
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