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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064203 ID=TCONS_00064203|Name=TCONS_00064203|organism=Clytia hemisphaerica|type=transcript|length=1859bp
aaagcttcatgcgagttctaagaaaacaaaagtttcaatccaattaaaga
agtatttgtccctttAAAGGATTTTTCGTGTAAGATTTTTATGTGTTGAT
TCGCAAAACTTCATCCCAAAGTTTTTATGGCTCATTTTATACTCTGCTGA
GACatgacggaaatccgtctgggATGGCaaaactttgaagaatgttttga
TAGAAAGATAATTTCCATCTAAGTCATTCCAAATTCATTATATGATAACA
ATTGTATGGTTTTTCCaaatataatgaatgaataaCTAAGCAGACTCAAT
ACGACGTTCAGCTTAATAAAGCCTATAAACTAAGCGCTTTTATTCAGGCA
ACAAtaccaaaaaattatttctacatTGTAAAACTACTAATTTAACAGGA
AAGGGAAAATATATAGCaaataaattttacttttagatACTAAAAATGTA
ACACACAAAATTAAACCCAACagttaaaaataaatattcatcATTGATAA
CAGttctaaaaatattaaatttcctAGAAGAACTAAacaaatagacctta
tcggagtttttgatttttctaaaaaagcgatgcattgtgggattgtttcg
ggggtattaaaACAGAATTCCcttgaggaattcctaagagatttctattg
taatacccccgaaacaatcccacaatgcatcgcttttttagaaatatcaa
aaactccgataaggtctaatgaccataaaaataaaaaaggtttttgcCAC
AAGAAAGAGGTTCAATCATAATTGTCTTTATTCAGTCCTATATTCAGACT
TCTTCTTACTGGTCAAGATTTCGTAAGCTTCTTGTATTTCCATGAACTTT
TTCTCAGCATAAGCACGATCCTCACCCTTGTATTTATCAGGGTGCCATTT
CCTTACTAATTTTTTGTAAGTCTTTTTAATCTCTTCGCGCGTCGTTGTCT
CTGTAACATCTAAAACTTTACGCGCGTTAGCTTCGCCTTTAGGATCCAAT
GCTTTTACGAGTTCATCGTACAAGGTACGCCATCCGTTTCGTTGTCCTTC
TTCGTAAAGCTGCCATAATGTGTTCTTGAATTCTAACCAAGCAGGCGATT
TAAAGAAATGATTTACTGAATCCCTGATTTTGATCGTTTCGCCGTCTTCC
GTAGTAATCTCGGCGTTGAAATATAAGAAACTGCCCCATAAAGTAAAAAA
CAAGCCCATACATAATGAAAACACCATCATACGTTTACATAAAGATCGTT
TCTGAGAATAAGTTCTTCTGTATTCTCGGAAAtgattgaaaacgaaagtg
gtacCCAGTACGCAATACATGTAGTTGACATAATCAGGGCTAAAATATTG
TAAAAGGTAATACACTATTACAGATCCAATATACGGTTTCCAAAAACCAC
CTTGTTCGCGGCCAATATTTCCAATCAAATGTACCCCCGTCGTCATTCCT
AAACACACCAGAAAAATCTCTAGAGTTTGTGGTGTTTCAGGGGGTAAAGC
TAGTTTGACTAGTCCACCGTAAAAATAACCCATCATAAGTTGTCCTGAAA
ATCGAACAATATTAAATTTGGGGTATTTCCTCAATTTCATTTGATTGGTT
AGTTCTTGCATAAAATGCGGCTCCTCGTTGACGTCATCGACGTAATCCGG
AATTCGCCACAAATCTCGAAACCATCCGAGAAAGAAAATCCCACCAAGGG
TGGACCACCATGTGAATGCTTGTCGGTCACGCCCTAAGTAGAAATGGTGT
AAACCAAGCCATCCAAAAAACGCCCATAACAGGTAGGTGATGAACAAGCT
TTTCTGTTgtgtcattttgtttttgttttttcttttatatgttcattatt
tctagctat Run BLAST on NCBI transcript from alignment at scaffold_41:318789..320938- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064203 ID=TCONS_00064203|Name=TCONS_00064203|organism=Clytia hemisphaerica|type=transcript|length=2150bp|location=Sequence derived from alignment at scaffold_41:318789..320938- (Clytia hemisphaerica)
AAAGCTTCATGCGAGTTCTAAGAAAACAAAAGTTTCAATCCAATTAAAGA
AGTATTTGTCCCTTTAAAGGATTTTTCGTGTAAGATTTTTATGTGTTGAT
TCGCAAAACTTCATCCCAAAGTTTTTATGGCTCATTTTATACTCTGCTGA
GACATGACGGAAATCCGTCTGGGATGGCAAAACTTTGAAGAATGTTTTGA
TAGAAAGATAATTTCCATCTAAGTCATTCCAAATTCATTATATGATAACA
ATTGTATGGTTTTTCCAAATATAATGAATGAATAACTAAGCAGACTCAAT
ACGACGTTCAGCTTAATAAAGCCTATAAACTAAGCGCTTTTATTCAGGCA
ACAATACCAAAAAATTATTTCTACATTGTAAAACTACTAATTTAACAGGA
AAGGGAAAATATATAGCAAATAAATTTTACTTTTAGATACTAAAAATGTA
ACACACAAAATTAAACCCAACAGTTAAAAATAAATATTCATCATTGATAA
CAGTTCTAAAAATATTAAATTTCCTAGAAGAACTAAACAAATAGACCTTA
TCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTGTTTCG
GGGGTATTAAAACAGAATTCCCTTGAGGAATTCCTAAGAGATTTCTATTG
TAATACCCCCGAAACAATCCCACAATGCATCGCTTTTTTAGAAATATCAA
AAACTCCGATAAGGTCTAATGACCATAAAAATAAAAAAGGTTTTTGCCAC
AAGAAAGAGGTTCAATCATAATTGTCTTTATTCAGTCCTATATTCAGACT
TCTTCTTACTGGTCAAGATTTCGTAAGCTTCTTGTATTTCCATGAACTTT
TTCTCAGCATAAGCACGATCCTCACCCTTGTATTTATCAGGGTGCCATTT
CCTTACTAATTTTTTGTAAGTCTTTTTAATCTCTTCGCGCGTCGTTGTCT
CTGTAACATCTAAAACTTTNCTTTTTTAGAAAAATCAAAAACTCCGATAA
GGTCTATTGACCATAAAAATAAAAAAGGTTTGTGCCACAAGAAAGGGGTA
CAACAATCATAATTGTCTTTATTCAGTCCTATATTCAGACTTCTTCTTAC
TGGTCAAGATTTCGTAAGCTTCTTGTATTTCCATGAACGTTTTCTCAGCA
TAATCACGATCCTCACCCTTGTATTTATCAGGGTGCCATTTCCGTACTAA
TTTCTTGTAAGTCTTTTTAATCTCTTCGCGCGTCGTTGTCTCTGTAACAT
CTAAAACTTTACGCGCGTTAGCTTCGCCTTTAGGATCCAATGCTTTTACG
AGTTCATCGTACAAGGTACGCCATCCGTTTCGTTGTCCTTCTTCGTAAAG
CTGCCATAATGTGTTCTTGAATTCTAACCAAGCAGGCGATTTAAAGAAAT
GATTTACTGAATCCCTGATTTTGATCGTTTCGCCGTCTTCCGTAGTAATC
TCGGCGTTGAAATATAAGAAACTGCCCCATAAAGTAAAAAACAAGCCCAT
ACATAATGAAAACACCATCATACGTTTACATAAAGATCGTTTCTGAGAAT
AAGTTCTTCTGTATTCTCGGAAATGATTGAAAACGAAAGTGGTACCCAGT
ACGCAATACATGTAGTTGACATAATCAGGGCTAAAATATTGTAAAAGGTA
ATACACTATTACAGATCCAATATACGGTTTCCAAAAACCACCTTGTTCGC
GGCCAATATTTCCAATCAAATGTACCCCCGTCGTCATTCCTAAACACACC
AGAAAAATCTCTAGAGTTTGTGGTGTTTCAGGGGGTAAAGCTAGTTTGAC
TAGTCCACCGTAAAAATAACCCATCATAAGTTGTCCTGAAAATCGAACAA
TATTAAATTTGGGGTATTTCCTCAATTTCATTTGATTGGTTAGTTCTTGC
ATAAAATGCGGCTCCTCGTTGACGTCATCGACGTAATCCGGAATTCGCCA
CAAATCTCGAAACCATCCGAGAAAGAAAATCCCACCAAGGGTGGACCACC
ATGTGAATGCTTGTCGGTCACGCCCTAAGTAGAAATGGTGTAAACCAAGC
CATCCAAAAAACGCCCATAACAGGTAGGTGATGAACAAGCTTTTCTGTTG
TGTCATTTTGTTTTTGTTTTTTCTTTTATATGTTCATTATTTCTAGCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064203-exon-scaffold_41-1575043694:319982..320938 | TCONS_00064203-exon-scaffold_41-1575043694:319982..320938 | Clytia hemisphaerica | exon |
| TCONS_00064203-exon-scaffold_41-1575043694:318789..319690 | TCONS_00064203-exon-scaffold_41-1575043694:318789..319690 | Clytia hemisphaerica | exon |
| TCONS_00064203-exon-scaffold_41-1510915933:319982..320938 | TCONS_00064203-exon-scaffold_41-1510915933:319982..320938 | Clytia hemisphaerica | exon |
| TCONS_00064203-exon-scaffold_41-1510915933:318789..319690 | TCONS_00064203-exon-scaffold_41-1510915933:318789..319690 | Clytia hemisphaerica | exon |
| TCONS_00064203-exon-scaffold_41-1491911889:319982..320938 | TCONS_00064203-exon-scaffold_41-1491911889:319982..320938 | Clytia hemisphaerica | exon |
| TCONS_00064203-exon-scaffold_41-1491911889:318789..319690 | TCONS_00064203-exon-scaffold_41-1491911889:318789..319690 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:318789..320938 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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