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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064214 ID=TCONS_00064214|Name=TCONS_00064214|organism=Clytia hemisphaerica|type=transcript|length=1212bp
AGGGTAATTTGCATCATTTGAGGGAAACTTTACATTGCCTCCAAACTGCA
GACCTTTCTTGGTCTGCACTTTGTCTAAGCTAAAatgtaaattaaatgtt
ttaCAATTTTAGTACCAGAAAGCTCTACTATTTGGAGGCGATACCAGTTT
CCCTCCAGtgattaccctttttcacggtaatcaAACAGTCTGATTGACAC
CACCTGgatatttattacaaattatctattgacagtttcttcttctctat
tcCTATTTCAGCTTTATGGCTTTGCCTTCCAGCCTTCGTTCATTCACCAT
GACAAATACCATATTAACCATTAAAGTAGTTTTACACGTTGGATGTACCG
TCAACTGTtttaaagccagattgacattataTGTTTTTATGAGATCTGAA
TCGCTGCTTCAAATACGCTgagtttgcacaaagatagcagttgttcaacc
aatcatcaaacttcattttaatataatatttcaatgacaagagagttttg
acttcaaaatgttgaaaaagaattggaatgaatttgcctgcgtttttaat
ggagctgtgcAATGTTTGTGCAATGGGACACCGAAACAGCAACCattttc
accgaacctccacagaatccttttttgtactgtccaagaaacatggaaat
ctgtttgttgttgaagaggATGTGACGATAGAGAGAAAAAGCTGACCAGA
AAGCAGTATGTCTCATGTTATCTCAAGTAATTTCATAATAGTTGACGGTA
CACAAACTTGACATTAACACTCCTTTTGTTGGAGAAATTCCTGAAGGATA
TTTCATGTTATGTTCCTGTTGTTTGGTtgtattttgaatcattttggttT
TGGAATGCTTCTGTACCCACTGTattctttacaaaacaatatttCATTAC
GATATAGACAACAACTTAGCTCaaaattatatcattgtcaaaatatggtc
ttggaaattataaattcatgttttgatatgtttgttatttttatttttgt
tattgttgtttcaaagaaaatgcttttgagaagaaagtCATTCTAAATAT
TTCCTGGAGATTATTCCAAGACCCTgcctataaaacatgaaaagctTTAT
AATTCAAGCTTTATAAGGTATCTATTAAAGGGGGCATGTTTAGTGCAAGC
TATGgctgagaaaaattgaatactttgcaatatcactgtatttctgacaa
aaataaacacgg Run BLAST on NCBI transcript from alignment at scaffold_41:423731..424942- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064214 ID=TCONS_00064214|Name=TCONS_00064214|organism=Clytia hemisphaerica|type=transcript|length=1212bp|location=Sequence derived from alignment at scaffold_41:423731..424942- (Clytia hemisphaerica)
AGGGTAATTTGCATCATTTGAGGGAAACTTTACATTGCCTCCAAACTGCA
GACCTTTCTTGGTCTGCACTTTGTCTAAGCTAAAATGTAAATTAAATGTT
TTACAATTTTAGTACCAGAAAGCTCTACTATTTGGAGGCGATACCAGTTT
CCCTCCAGTGATTACCCTTTTTCACGGTAATCAAACAGTCTGATTGACAC
CACCTGGATATTTATTACAAATTATCTATTGACAGTTTCTTCTTCTCTAT
TCCTATTTCAGCTTTATGGCTTTGCCTTCCAGCCTTCGTTCATTCACCAT
GACAAATACCATATTAACCATTAAAGTAGTTTTACACGTTGGATGTACCG
TCAACTGTTTTAAAGCCAGATTGACATTATATGTTTTTATGAGATCTGAA
TCGCTGCTTCAAATACGCTGAGTTTGCACAAAGATAGCAGTTGTTCAACC
AATCATCAAACTTCATTTTAATATAATATTTCAATGACAAGAGAGTTTTG
ACTTCAAAATGTTGAAAAAGAATTGGAATGAATTTGCCTGCGTTTTTAAT
GGAGCTGTGCAATGTTTGTGCAATGGGACACCGAAACAGCAACCATTTTC
ACCGAACCTCCACAGAATCCTTTTTTGTACTGTCCAAGAAACATGGAAAT
CTGTTTGTTGTTGAAGAGGATGTGACGATAGAGAGAAAAAGCTGACCAGA
AAGCAGTATGTCTCATGTTATCTCAAGTAATTTCATAATAGTTGACGGTA
CACAAACTTGACATTAACACTCCTTTTGTTGGAGAAATTCCTGAAGGATA
TTTCATGTTATGTTCCTGTTGTTTGGTTGTATTTTGAATCATTTTGGTTT
TGGAATGCTTCTGTACCCACTGTATTCTTTACAAAACAATATTTCATTAC
GATATAGACAACAACTTAGCTCAAAATTATATCATTGTCAAAATATGGTC
TTGGAAATTATAAATTCATGTTTTGATATGTTTGTTATTTTTATTTTTGT
TATTGTTGTTTCAAAGAAAATGCTTTTGAGAAGAAAGTCATTCTAAATAT
TTCCTGGAGATTATTCCAAGACCCTGCCTATAAAACATGAAAAGCTTTAT
AATTCAAGCTTTATAAGGTATCTATTAAAGGGGGCATGTTTAGTGCAAGC
TATGGCTGAGAAAAATTGAATACTTTGCAATATCACTGTATTTCTGACAA
AAATAAACACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064214-exon-scaffold_41-1575043694:423731..424942 | TCONS_00064214-exon-scaffold_41-1575043694:423731..424942 | Clytia hemisphaerica | exon |
| TCONS_00064214-exon-scaffold_41-1510915933:423731..424942 | TCONS_00064214-exon-scaffold_41-1510915933:423731..424942 | Clytia hemisphaerica | exon |
| TCONS_00064214-exon-scaffold_41-1491911889:423731..424942 | TCONS_00064214-exon-scaffold_41-1491911889:423731..424942 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:423731..424942 - |
Blast
The following BLAST results are available for this feature:
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