TCONS_00065205 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065205
Unique NameTCONS_00065205
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1945

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065205 ID=TCONS_00065205|Name=TCONS_00065205|organism=Clytia hemisphaerica|type=transcript|length=1945bp
CGTAATGTGAACTTATTTTCGGAAAGCAATTTCACAAATCATAAATAGAC
CGGTGTAAAGATGAATGAAGCAGCGAAAATGGCAAGTCAAGAAGAATCAT
CCAACGTGGCCATCAAGCAACGTGTTTTGGTGTTGGGTGCAGGACTCGTG
TCCGGACCTCTTGTCGAATACTTGACACGTGACAAAAGTCTAAAACTCAC
AACAGTATCATCCGTTCATGACGAGGGACTGGAACTAGCCAAGAAATATG
ACATCGAACCAATCACAATGGACGTTGCAAAATCTCAAGATCGTTTACAG
AAATTGGTCAGCGAAAACGATTTAGTCATCAGTTTATTACCATACACGAT
GCACCCTATGGTGGCCAACATGTGTATCGAGAATAAGAAGAATATGTTGA
CTGCAAGTTACGTCACTCCAGAAATGAAAGAGCTCGGTGAAAAAGCTGAA
GCTGCTGGAATAACGATCTTCCAAGAGATTGGTTTGGACCCTGGAATTGA
CCATCTGTTAGCAATGAATTGTTTTGATAGTGTAGCCGAATCTGGCGGAA
AGGTTGTCGGCTACAAATCATACTGCGGTGGTCTACCAGCTCCCGAAGAT
GCCGCTAACCCGCTCAGATATAAATTCAGTTGGTCACCACGCGGTGCATT
GCTGACTGCTTTGAATGGTGCACGATATTTGAAAGATGGAGAGaTTGTAG
AGATTCAACCAGGATCACTGATGGAAAACACGTCTGCTTTTGAAGCATAC
CCTGGCTTTAATTTGGAAGGTTATCCAAATCGTGATTCTACAAATTATGC
AGAAAAGTATGGACTGAAAGACGTCAAAACTATGATCCGAGGGACTTTAC
GATACAAGGATTTTTCAGACGCTATGCTAGCGATTCATCGTTTAGGATTT
TTAGATATGAGCCAAAAACAAGGATTTGAAGAAGGAAATTCAACTACTTG
GGGAACATTGATGAACCAATTACTGGGTACGAACAATTTGGAGGGTGACA
ATTTGGAGATCATTGTCAATGACATCATTAATAACAACAGTGTCGCGTTG
AAAGCTATCAAAGAATTGGGATTATTATCCAACGACATTGAAGTGATCAC
CAAAGGATCGCCATTAGATACACTTTCAGCATATCTCGCCAGCACCCTGG
TTTACGCACCTGGTGAACGCGACTTAGTCCTCTTGAACAACCAAATTGAA
ATCGAATGGGCAGACAAGAAAGAGATACGCGAGATTAGCCTGGTCGCTTA
TGGTGATCCCAAAGGCTATAGTGCCATGGCACGAACTGTTAGTGTGCCAG
CTGCAATCGCTGCAAAAATGATCTTAGATGgtgAAATTTCAACTAAAGGT
ACAGTCGTTCCTCTACGCCGTGAATTCTATGATCCAATTCTGAAGAGATT
GGAAACTGAAGGAATTAGTTACACTAGCAAATCCAAATTTTCATCTTAAG
GCCCTGTTTACTTCATGttctaaaaattgtaaatgaTGTTATGGCTCGTA
GTCACAGCAAGACAAGAATTATTCTTTGTATCGTAAAAAGGGATAATGCA
AACGGACCCTTATAAACGTTTTAGGTTGGAAAAACTGACAATTTTTAtca
agtgatttttttaattacagTACATAAGACTAGGTAGCAACtaccaaatt
ttttaaaatttagaacTATTTAATATTTTAGGACAAAATAGGatctttta
tttaatttttcattatttaattgaaattttagaaaaaatcataattttgc
GGAAATTTTTTTGTGAGAATGGTTTTGCGGAAATCTTCTGAAGTAATTTA
TTAGTGTGGAAAAAAGTTCCTAATTGCCCAAAAAGAGTTTTTGAGTTACA
TAATCAAGTTTTAGGATTTCCCCAATGTTAATTAGAATCCCCGAAGTTTA
ATTATTGtccccaaaaatttttatttagtcttcattttttgttat
Run BLAST on NCBI

transcript from alignment at scaffold_433:315457..327121-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065205 ID=TCONS_00065205|Name=TCONS_00065205|organism=Clytia hemisphaerica|type=transcript|length=11665bp|location=Sequence derived from alignment at scaffold_433:315457..327121- (Clytia hemisphaerica)
CGTAATGTGAACTTATTTTCGGAAAGCAATTTCACAAATCATAAATAGAC
CGGTGTAAAGATGTAAGTGTTACGCGACATTTCCAGGATTCGTTTTTTCT
TTGCAATATCCTTTTTCTACATCGAACCACTTGCATAGTTTCTATCCCCT
ATATAAGGGGTTCTTAGATTTTAATGAAACCCAGACAAAGGGGTGTTGAA
AGTTTGAATATCCTAAGGTGGTTGTAAGTTAAGGGGTTCTTTCTACCTAA
AGTGGAATCTCGACTCCTCTATGGGCCAATTGATTTTGTTTGGTTTTGTA
TGGACCAATATCTTTTGAAACAGTAAAAAAGGTTGTTTGTTTTTATTTAA
TTTTATATTTCATTAAAAATAACCAAAAAATTGACATATATTTTCTTTGC
ATTTTTTCATACCTATGATAGATAAATGGATAATCAGTGTGCTTTAACTA
CTGGACGTCCGCGTTGTCGTTGTCTAGAGATACTAGACCGATACCGACAA
GCAGCTTTTTGAACGTGTTCGTGCTCTATGGCTAATTTGCGTTCTGTAGC
CTGCTTGCCACGTTCGCGGCCTTGCCTGGAGAACAACAAACGTTGTTCTA
GCTGCTCCGAACGAATTTCTTCGTGTCGTGCGGGCTTCTTTTTTGTTACT
TTTCGTTTTCGGTTAGCCTCCATGGCGGCTTTACGGAGGCTCACTTTCTC
ACCTCGTCGTTTTGAATTCCGACTAAATGTGAGCCGTTCCTCTAGCTGTC
GTCGACGGTTCTCCTCGTGTCGGTCCTGCTTCTTTTTGAGTCTCTCCTCC
AGTTTGACAAGATGGATGCGACGAAGAGTCTCGTGTCGGAATGTTTTAGC
TTTTAATTTTTTCACCAGCTCCTTCTTCCTGTCCTCCATATTGAGTATTT
CGGTGAACTCCCGGAATGGTTGCGACGGCTTCAGTTGTTGTAAAGGTGAA
ACGGACGCAAGTCGGCGCCCGAAAGGATTAAAGATGGTGCTACCCGTNCT
GTTGCAAAGGTGAAACGGACGCAAGTCGGCGCCCGAAAGGATTAAAGATG
GTGCTACCTGTCATGCTGATGCGATCAATCCTGAATTGCATAGGTTCAGG
GTTCGAGCGAAGGGGCGGCAGCGTTTTCTCGTAACGAGAAAATCGGCATG
GATGACGAACCTCCGGAAGTAAAATGTCATCCAAGGCTTGTAGTGGGGCC
ACCAAAGGTGGTAGTTTGGCTGCGGGCGCCGCCCCACTAGTGAAAATGGG
AACCTCCCATGCTGTAGGTCCTCTCTCTATGATGAGAGGCTTTAGGGCGG
TTGAAGATGGTTGGTTTGTAATTTGGCGTTGAGAGGTTGAGGATTCGGTC
GTCACATTTTTCTTGATCAGAGCCTGGCGGGTAACCGATGCGTCGCTTTC
GCATCCAGAATCCAAATATATATTACTTGGGCATTGCTGATTACCAGATT
GTCGATCAACGTCAATCTACAAAGTGGAAATTTTTCGAAAATCTTTTAGA
GTTACGAACATAACTGATGTGTGTTTATTTCTAAAGGTCCGCATAATTTT
ACTTTGAGGAAGCTATCACTTAAATTTTCAGCCGAATATTAAGGACTTAC
CTGGGAACCTTTCAGTAGGTTTGTCCCGATAATTACCAAGCCTTCCAAGG
CCTCAGATTCAACTTCATAGTCTGAAAGAAAGAGAGAAAATACATTCAGA
TTGGAATAGATTTTGTTTTGACTTAAATGAGTATGAGTTCAAGAACGAAG
GTGAAGTTTGTTGGCTTTAGTTCCTTATTGATTGACAAAGCACAATCGCA
CAATCGACCCAAAAATGTGTGTTTCTTGCAATCTGGTAATCAGTGTGAAT
AATGAAACCGTTCTATACAGGAAAGGGGTCAAACTGTGAATGCAGTGGGA
TCTCCATCACTCGAACTGGCTATTGACCCTTCTCATGCTATCCTGTTCGA
GTTTCAGAGGCTGGTTTGAAAAACGTTTGTTAACGGAAGAAGTCAGAAAA
CGTATTATACAGATATTATCTACAGGCATATGTTTCGTCCTTCCCAGGAC
TCATCAGTGCGACTCGCTTAGAACATGGACTGCTGTTGTCACCAGAGTGC
TCAAAACACTAAGTGTTGAGCTACGCATAATTGCTTTTGGTGAACGAAAA
AGCAGAGCTTGCTCCTCAACAGAGTCTATAGAGTGCTCAAAGAACCGAAT
TTCTGAGCGTAATACAGATATAATAGTTAAACAGAATTGAACGATTATTG
ATGATTCCATTGTAGTTACTACCCATTTGTCTATCATTATCTCCAATAGG
GTACTGGCATCCTCTAACGATTTCTTGTTTCTATTTCTATTTGGCTAAGC
TAAGAGGCTCGCAGAACCATTTTCGCAATTATAGGTGCTTTCACATTGGA
CAAGCACAATGGACTGACAATCTAATTGCCCTAACATCGTATGGTATGCG
TTGACCCGGGTAAAGGCTTAACGCTGAAAGTGTGAATCGAACCTCAAACA
GTATTGTAGAAATATGCGAATCAGGTCTACTTACCATTTTCGAAGTCATT
CATTGAAGAACTTCCGATATCTTGATAAGCAAGACTCGGGTCTTTTTGCT
CCTTTGAACCACCGTTTCCGAAACACCACACATTTCTCTTGATGCTTCTA
TATATGGAGCGTATACGAGAAAATCTCTTCTTTTTTCCGTATGTCGCGAG
ATCTACAAGATGAGAATGGAATGATTATACCTTTTTCGAGTTCATTATCA
TACGAATATAAGTTGACACGATTTAATTTTGCATGTTCAAGGACATAATT
ACTCTGAACCGGACGTTTGGCAAAAAACAACACTTATAGACTTACACACT
CACTTTAATATGGGCCGCTCATTAAAAAAAGAATGTACTTACTTTCGCTT
GAAGAATGGAAAGCGAAGACTTCTTCTTCTTCACATCCACTCTCCTTTGA
GGCGTCCATCGTAGACACAATGGGCGGTACACCCCTTTGTGTTGTTTATT
AAAAATGCAACGCCAACTAAGTTGTATTTGTGTATTGAGCTCCCAGCTCC
TGCGTCCAAAATACTCGATTGATTGTTGATTTGTATTGTTGTCGAACGTA
TCCGATGGATTCCAAAAACTGCGATTTATTTCGTCCTTCTGTGTCCATAC
AACCTTCCTCTTTGACATCCAACAAGAAATTGACGTTTTTAATAAAATTA
CATATTTTTGACGTTACATTCTACACATTAAACAATAATTGACGTCAAAT
GAAGATTTTGATTCGTTTCTATGGGTACTGAAGCCTTGAGGATGTTTTAC
ACGTACACCGTTTTTTTTCAGTTTATGATATCGGTGTTGTGTAAACATAG
CTTTAAAGTGTGTATGCCTTTGTGCACCTTTTTTAAAGAATTTTTTAAGT
GTTTTCTGATCAATAAACTTATTTATTCCTTTAACAAATTTTGACTCTAC
GTTTACATTGTATGCCAACCTCAGAATCGAATTACGCCGCTTTTAATTCG
AGCGAGTAATAAAGTTAGAGTAACTTCTCGAACTTTATTGGTAGACCTAC
TAACTTTAGCTTTAGTCTACGTCATATCTTCCTTCGTTTCGAGCGTAAAT
CTCCTACTCTTCGGGATATGAGCACTGCTCTTGTTTTGAATATTGAAATT
CTCCGGATACATCGCATCATGCGCACTGAGGTTATGATGAAATAATAGAA
GGTTTTGAAACCTTAGCCAATCAGTTGTGTTTTAAACATTCTTTTCTATT
GATAAACTTCTTTTGTTTAAAACTTCTATCATGTTTAATCCTATTAAAAA
GTGAATTCCCGGTGGGGGTCACTAGTGGCCGCCAATAGCAGTGCCTATAG
ATCAAGAGTAAGACCTAAAAGCCTGGAGCTGTCTTATTGTGTAGACTAAC
TTATTTAGACTTTCATGAAACAACATTAGCGTAGTTATTTTGAAATCATT
ATTAAACCGAATTTTTCTTTTAATTTTCTTGAACTTTTCATAATCGAGTA
ATGCCTAAAGAGAGTCTATAATCGACTGCGTCTGAATAGTTTACGACTCT
CAATGGGCCTGAAAATTCGTATAGAGAGTAGAACGAACGTTTTCTCTAAC
TTTTTTCTTAAGGAATGAAGCAGCGAAAATGGCAAGTCAAGAAGAATCAT
CCAACGTGGCCATCAAGCAACGTGTTTTGGTGTTGGGTGCAGGACTCGTG
TCCGGACCTCTTGTCGAATACTTGACACGTGACAAAAGTCTAAAACTCAC
AACAGGTACAAGCTTTTTGTTTCTGAACGCAATTCAAAATTTGTAAGCGT
GATCATAGTCATTATAAACTGTTACAAACAAAAAACAAATTGCGATTTAC
ATACTTTTTGATCACGTTACCAATATCTCCTCTTGGGATTTGTCTATTTT
CTAATCACATGATCAAAAAGTTTGCAAAGTAAATCGATTTTGGTACGTAA
GCTCTATCTTTTAATAATAAAAACAGACAAAAGCCTTCCAGACCAGTGTT
TTTATAATGACTATGGCGTGATATTCGCAGTGTTATCCTTCATACGGAGA
TACCGGAAACAGCGATCATCTTCTGTTTCTTTCCCTTCGAATTCTACCGT
ACTTACAGCTAAGAATCCGAAAAGTTCGTTCAACAATCGAATGAAAACAT
TTCCGCTGAAAATGCAAATTATGAACCAAGCTGGCTGCTAATGAAAACTG
TTCAACGAAACCCTCTCAAATAATGTGCCAGCTTGATTTTGTTTTTTTTC
CGAAGTTGCTGTACCGCAGCACTATCTGAATTTTTGCGTTTTTGACGCGT
TGAGCGAACTTTTAGACTGTTAACCGTAAGCACGATAGCCTCATTCATGT
TTCATTCAGTTTAAAAAGAGTTTGGGTCCCGTCCACTTTAAAGACTGTCT
TCCAAAGAATGTCTGACTCTCTAACGTAAACCCTGCGCCGTTTTAAGTAT
AATGTTTATATTTTATCTTTAGTATCATCCGTTCATGACGAGGGACTGGA
ACTAGCCAAGAAATATGACATCGAACCAATCACAATGGACGTTGCAAAAT
CTCAAGATCGTTTACAGAAATTGGTCAGCGAAAACGATTTAGTCATCAGG
TATAGAATGAACTCCTTGCAATTTCCCACTGAACTCTAACTACTTGACTG
TATCGGGCTTCCCATATAAAAGGAAACGTGTGAAAAGTGTCCAGTTTTAG
AGCTGACTAGTCCGTCATTTTGTTTTCGATTCTGGTCGTTAACAGCGTGA
TTCGAATATTTTGAAATTCGAACGTTCGAAAACCCACGGTAAGTTACAAA
ATAACATGGTGGACTAGTTGACTTCAAAGCTAGACACGCGTCGCTTTCAC
GGGAAATCTGTAAGCAGTTGGCCTAATTAGTGTGTAAAATATATGATATC
TGAGTTCTTTTTCCAAGTATAAATGAAAGGAGCGTCGCAAGCAGAAATTT
ATCCATTTGATCGGATCATTTATTTCTTTTGAATTTTCCTTTTCGTATAA
AAGTAGTGATTAGGAAGATTCTTTTTAAAAAGGACACTCAGTTTCGTGAT
CAATTCTGTTGCAACTGTGATAATGATTCACCGATTTCATCTTTTTAGTT
TATTACCATACACGATGCACCCTATGGTGGCCAACATGTGTATCGAGAAT
AAGAAGAATATGTTGACTGCAAGTTACGTCACTCCAGAAATGAAAGAGCT
CGGTGAAAAGTACGTTTCCTTCTTAATACAAGTCAAACTGCGCTTTTTTT
AACTCGTATCTAGAGGTATTAATCCATTAAAATGTAACTGGCATCAAATA
CGAGCAGATTACTAATTTTTTTTTTTTCTTTGTTAACAATGGACATTTGA
GATTTGACCAATTTAATTTTATGAAAGTTCATCCACTCTGCTTAAACCAT
GCTCTACTCTTAAGGGATGTTTCGAATGTGAAAGTGATCTCTTACGGAGC
CATGGACTATTAGAGTCAATACGTTTTATGCGTGGAGTAATCAGAATCTG
CTAGCAGATCAAATCTAAATAAAAAATGGTCTAAATATAAATTCAGTTTA
CGTTTACGCTCATTCAACGGACCTTACGAACTTTAGATGGACGTCATTTT
GACGCCGTGTCCCTTTTAAGTAAGAAGTGAAAATATTCAACACCTTAATC
GTAAAAAACCATGTCCTGTTACCACATTGCTTGATTTCTGTTCACTGTTG
TTCTCTCCCTTACAGAGCTGAAGCTGCTGGAATAACGATCTTCCAAGAGA
TTGGTTTGGACCCTGGAATTGACCATCTGTTAGCAATGAATTGTTTTGAT
AGTGTAGCCGAATCTGGCGGAAAGGTATAATAATAGCCGCTCTAAACCGC
AATCAAACTTTTCGAGTATTGCTTCATACGCTAGTTTAGACGTATAGAGA
TGTGAATCGCAATAATCTATCCAAATGTGATGTTAATGGTTTTTAAAAAA
TCCCATTTTTTGAACATTTCGTTCAAAGAGTGTTTTTCAATTATTTTCTC
AGGTTGTCGGCTACAAATCATACTGCGGTGGTCTACCAGCTCCCGAAGAT
GCCGCTAACCCGCTCAGATATAAATTCAGGTACGTGTGCCGAGCCGGCTT
ATGTCGATTACCTTTAAAAGGGGAAAACTTGGTCGTGTTTAAATGTTCGT
CAGTTATTTTGACAAAAACTTGGTCACTTTTGTGAAAATCTTTGTAACAG
CTCTCTTGAAGTTGAAAAAGGTTTTTTGCCGGGAACTTCGTCACTTGCTT
GACAATTTCGTCATTTTTTCCTGATCAATTTTGCCCTTTAAAGTACCCTA
TTTCCGAGACTGGCTGGCTAGGTTAGAATAAAGTTAGAATAGAATGAATA
GCAAGTTAGCTGAGTCATAAAGTGTTTCAAAAGACAAGTCGACTGTAATC
ACATCGAATTTTCATTTTTAGCAATTGGCTTACGTTTACTCTGAGGCGGT
CGAAGCAAGTATATTAGTTTGTTTGTTAGCTCAGCTTATCCTGATTCTGT
TTTTTAGTCAGCAATTTTCATTGTGTGGTTTGTCTACCTATTTAATAGGT
GGTCAAGGAGGTCTTTCCTGATGAACTTTCACTTTCGTTTTGTAGTTGGT
CACCACGCGGTGCATTGCTGACTGCTTTGAATGGTGCACGATATTTGAAA
GATGGAGAGGTATTGATTTATAATATAATAAAGAGTCCACACATTATCTA
AGTTTCAAACTCAGAGTTTCATGGTGCTCAGGCACCAATCATCAGTGAAA
TGAGATACGCTAGAAAATAAAATACAATATTTTGTCTTCAAAAAAATGTT
TTTGACGTCACATTCGAACGTCATCACATGGTTCAAAGATATTAAGCTGA
AATTTTCGTCTGTGCCTACATTTGCCAATAATTTATGTATGGATTTACAC
GCTTTTTTATTAATACTAGTCAATGGTATACCATTTATTCGATTTGGAGC
ATTGGCTCGAAAATATAAACAAAACAAATAATCAGTAGTACGTAGTACAC
ACTTAAAGCGAATCAAGTTTAATATGGAGTTGTGTCATTGCTGAGGATTG
TTGTAATATTGTTCTTAGGGTTTGGCCAACAATTAGGGCCCTAATGAGAA
TTGTTATAATGTAATTTATTTTGTTTCAAATTATTTTAAACCAACACGTG
GCTCTTAGTACAGTACGATAATTCTTCTTCTGTCTTTTGGGTGCGCGTTT
TTACTTGCAAGGTTTTATTAAACATAGCGTTCAACTAAAGCTTGAAATTT
CTAGAATTTTCTTCTTCTTTTCTTCAGATTGTAGAGATTCAACCAGGATC
ACTGATGGAAAACACGTCTGCTTTTGAAGCATACCCTGGCTTTAATTTGG
AAGGTTATCCAAATCGTGATTCTACAAATTATGCAGAAAAGTATGGACTG
AAAGACGTCAAAACTATGATCCGAGGGACTTTACGATACAAGGTAATTGT
GGTTTTTGTAATCTTCATTGACAACGCTAAAGTAATTTTTCTTTCTTTCT
GACAGATATTTCTCTATAATTGTAGAAGAAAAGATTTTTGATCAACTTAG
AGTAGAGAATGGTGCTTTTGCCTGATTTCATTTAAAAGTGTCTATGTATT
GACCTGCAACCACCTCCTTAGTTTGGCTTATGTCTATGAGTGTGGTCGCT
CCATTCATTACTTTCTTTTACTTACTTACTATTAACTGCTTTTATTTTGG
TTTTTAGAAGATTTTCATTTTGAGACCTCCGCCAATGTGTTCTTGATTTA
TTCGTTTTATAGTTTGTTGATAATGACAACTGGGAGATTTTATAAACTAA
AACTAAAGAATGATTTTAACGATCATGGAACCGACTCAATGCTGTTAACA
TGCTTGATTGTAGCTAAATTTGATTCGTTTTTTCTTTCGTTTTCAGGATT
TTTCAGACGCTATGCTAGCGATTCATCGTTTAGGATTTTTAGATATGAGC
CAAAAACAAGGATTTGAAGAAGGAAATTCAACTACTTGGGTAAGACCTTT
TTTGAAATTATTAATGTTGGGTTTTCTCGGATTCGCTTGCCAAAAGGTAA
TTTTGTTCGTATATGTACATTTTATTAAGAGATGGTTATACAAATGGCTT
TGATTCGGTTCGCTGAAGTGAAGTCTTCTTATGAAGACTGGTTCAGTCGA
GTTTCCAAAAGTGCTGAAATCTGCTCTCAACCTCTGTTTCGGGTTCAGAA
TTTCATAATTACAGATTCAAATGAGAAACTGTATGCCAAAGATCTCCCGG
GGATTCAAGAGCTAAATATGCTCTTGAATCCCCTGAGTGATCTTTTTAAC
GAATTACATTTTCAGCTGAGTGTCGTTTTGCTTGTTGGTTCAAACATTCT
GTCTTTTGGAAATCTTTTGCCCATTTCGCTTCCCAAAATCGCTGACATCG
ACTTTAAATACCGGATGCGCCACAAAATAGTTTCTCTCTTTGAAACTAAT
TTTCTTGAAATCTAAAAATTTTAAAAGAACCATTCCTATTTTTTACCCAT
CAAAATTTAAGTTTATCTTCCTTCTTTCCAATAAAACAGGAATGGTTTTT
TATAATTTTTTAGATATTGAGAAAATAAGTTTTACAGAGAAACTTTTTTT
TGCGGCGCAGTATTTGTTGCGGGTTTTGAGATTTGGATGATCACATTGAT
TGGTAATATTTTTCGTTTACGTTCCAGGGAACATTGATGAACCAATTACT
GGGTACGAACAATTTGGAGGGTGACAATTTGGAGATCATTGTCAATGACA
TCATTAATAACAACAGTGTCGCGTTGAAAGCTATCAAAGAGTAAGTGCTT
TATGAGTCCTTTATTTTTGAATTTTATCATTTCCTAAATGTTTTTTTAAG
CCTAGGCAAGCTCTTGTTTAGACGGTCCACTTTTCGCCCTGCCTATTCTA
ATTGTAATTAAAGTGGGCATAAAGTATGCTGTCTTAAGTCAATGCATTGC
CCTCTTTTGACGTCAGTGCAATGTTTCCACCCTTTTCAAGCAAAGATTTT
AACTCCAACTTTGTGCCCACTTTTTGCCTACTCAAACAATTAGAATAGGC
AGGGCAAAAAGTGGGCCGTCTAAACTAGAGCTAAAGAACTTTTTAAGTGT
CGTTAAAATAGTGAAGTGCAACGTTGATTTATAGACCATTTAACACCTTC
TCTTATCTGTTAGATTGGGATTATTATCCAACGACATTGAAGTGATCACC
AAAGGATCGCCATTAGATACACTTTCAGCATATCTCGCCAGCACCCTGGT
TTACGGTAAGAATATTGTCTCATTATCGGCCGCGTATCAGTGGCGGCCGC
CCATTTTAAAGCTTAAAGAAATAGACCAAATCTCCTGAGCTTCTATTGGA
AGTGACCTTTTTGTCTGATTTTTTTTCTGGCCTAAACCTAAAAGATTGGG
TTGTTAAGATGGAGGAACGTAGTTATAATGTCTTCATGAGGTCTTTCTTT
TATATTGACTCTATTCCTTTTTATTGCCAAATAAGTGGTTTAGTAGTATG
ATGATTGCTGACGTTAAATTCGAGGAATTGAAAGATTCGAATGCACGATA
GCCTAATAAAGAATACAAGTTTGAATAATTTTCATGGTTATTCGTCAGTT
TGTATTTTCTTCAGTGTATGTTATATTCACTATAAAATATTCACTGTATT
TCTTTAATCTCCCTAGCACCTGGTGAACGCGACTTAGTCCTCTTGAACAA
CCAAATTGAAATCGAATGGGCAGACAAGAAAGAGATACGCGAGATTAGCC
TGGTCGCTTATGGTGATCCCAAAGGCTATAGTGCCATGGCACGAACTGTT
AGTGTGCCAGCTGCAATCGCTGCAAAAATGATCTTAGATGGTAAGACGAA
ATTTATTGTTAACTAATGAACATCTTCATACATAGATTATGTCATGAACA
TCATTTGCCTTATTTACGAAGTGATGATAAGGCAGCTTATTCTTAAAATC
TGAAATGTACACTATATTAGTTGAAGTATGATCGCAAATCAGGATCCTGC
CACAGGCACGACGCACCGGCCGTATCAATTTTTTTTTCAAAAAATCCTTA
CATTCCTCTCTTCGTCGGTAAAATGGATTAAATCTCCACATTCGCCGTAC
CAGCTTTTGTAGTGCCTGCTGTCAGGATCAATTGTCAATAAGTGAGCTAT
AGGTGATCCTCCTGATTTATGAAAGATCCGAATGTGGCTCTGTTAATGTA
TTGACTAATTTTACGTCACTTGCAACCAATCAGCTATTGGTTCCGAAGAA
GACATAGCAATGGTGCATATCATAAATTATGTTTCCACGCATGACTATTT
TCGAGTGCTGATTAAAGAAAGCACATCAAACCCATCGTACTTGTGGGGAG
TTTGAGACCACCTTTTTAATAAGCAATTACTGGAGAAGTAATTTTTCCTC
GTTGTTCTCTTCAAATTTTTGAGATTAGTACCCTATGACGCGATCATTGT
ATCTCTTGTTGATTGAGATGTTTTTAAGATGCGACTTTTTGAGCATATAA
TACAACTGTGTTTCTAATAAACAGCTCATTTTCTTTTTCTTTTTTTCCAG
GTGAAATTTCAACTAAAGGTACAGTCGTTCCTCTACGCCGTGAATTCTAT
GATCCAATTCTGAAGAGATTGGAAACTGAAGGAATTAGTTACACTAGCAA
ATCCAAATTTTCATCTTAAGGCCCTGTTTACTTCATGTTCTAAAAATTGT
AAATGATGTTATGGCTCGTAGTCACAGCAAGACAAGAATTATTCTTTGTA
TCGTAAAAAGGGATAATGCAAACGGACCCTTATAAACGTTTTAGGTTGGA
AAAACTGACAATTTTTATCAAGTGATTTTTTTAATTACAGTACATAAGAC
TAGGTAGCAACTACCAAATTTTTTAAAATTTAGAACTATTTAATATTTTA
GGACAAAATAGGATCTTTTATTTAATTTTTCATTATTTAATTGAAATTTT
AGAAAAAATCATAATTTTGCGGAAATTTTTTTGTGAGAATGGTTTTGCGG
AAATCTTCTGAAGTAATTTATTAGTGTGGAAAAAAGTTCCTAATTGCCCA
AAAAGAGTTTTTGAGTTACATAATCAAGTTTTAGGATTTCCCCAATGTTA
ATTAGAATCCCCGAAGTTTAATTATTGTCCCCAAAAATTTTTATTTAGTC
TTCATTTTTTGTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040881XLOC_040881Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065205-exon-scaffold_433-1575043694:327060..327121TCONS_00065205-exon-scaffold_433-1575043694:327060..327121Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:322867..323009TCONS_00065205-exon-scaffold_433-1575043694:322867..323009Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:322023..322149TCONS_00065205-exon-scaffold_433-1575043694:322023..322149Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:321413..321523TCONS_00065205-exon-scaffold_433-1575043694:321413..321523Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:320798..320906TCONS_00065205-exon-scaffold_433-1575043694:320798..320906Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:320543..320619TCONS_00065205-exon-scaffold_433-1575043694:320543..320619Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:319963..320026TCONS_00065205-exon-scaffold_433-1575043694:319963..320026Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:319180..319344TCONS_00065205-exon-scaffold_433-1575043694:319180..319344Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:318633..318725TCONS_00065205-exon-scaffold_433-1575043694:318633..318725Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:317832..317944TCONS_00065205-exon-scaffold_433-1575043694:317832..317944Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:317367..317458TCONS_00065205-exon-scaffold_433-1575043694:317367..317458Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:316782..316955TCONS_00065205-exon-scaffold_433-1575043694:316782..316955Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1575043694:315457..316071TCONS_00065205-exon-scaffold_433-1575043694:315457..316071Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:327060..327121TCONS_00065205-exon-scaffold_433-1510915933:327060..327121Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:322867..323009TCONS_00065205-exon-scaffold_433-1510915933:322867..323009Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:322023..322149TCONS_00065205-exon-scaffold_433-1510915933:322023..322149Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:321413..321523TCONS_00065205-exon-scaffold_433-1510915933:321413..321523Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:320798..320906TCONS_00065205-exon-scaffold_433-1510915933:320798..320906Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:320543..320619TCONS_00065205-exon-scaffold_433-1510915933:320543..320619Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:319963..320026TCONS_00065205-exon-scaffold_433-1510915933:319963..320026Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:319180..319344TCONS_00065205-exon-scaffold_433-1510915933:319180..319344Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:318633..318725TCONS_00065205-exon-scaffold_433-1510915933:318633..318725Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:317832..317944TCONS_00065205-exon-scaffold_433-1510915933:317832..317944Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:317367..317458TCONS_00065205-exon-scaffold_433-1510915933:317367..317458Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:316782..316955TCONS_00065205-exon-scaffold_433-1510915933:316782..316955Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1510915933:315457..316071TCONS_00065205-exon-scaffold_433-1510915933:315457..316071Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:327060..327121TCONS_00065205-exon-scaffold_433-1491911889:327060..327121Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:322867..323009TCONS_00065205-exon-scaffold_433-1491911889:322867..323009Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:322023..322149TCONS_00065205-exon-scaffold_433-1491911889:322023..322149Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:321413..321523TCONS_00065205-exon-scaffold_433-1491911889:321413..321523Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:320798..320906TCONS_00065205-exon-scaffold_433-1491911889:320798..320906Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:320543..320619TCONS_00065205-exon-scaffold_433-1491911889:320543..320619Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:319963..320026TCONS_00065205-exon-scaffold_433-1491911889:319963..320026Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:319180..319344TCONS_00065205-exon-scaffold_433-1491911889:319180..319344Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:318633..318725TCONS_00065205-exon-scaffold_433-1491911889:318633..318725Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:317832..317944TCONS_00065205-exon-scaffold_433-1491911889:317832..317944Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:317367..317458TCONS_00065205-exon-scaffold_433-1491911889:317367..317458Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:316782..316955TCONS_00065205-exon-scaffold_433-1491911889:316782..316955Clytia hemisphaericaexon
TCONS_00065205-exon-scaffold_433-1491911889:315457..316071TCONS_00065205-exon-scaffold_433-1491911889:315457..316071Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:315457..327121 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.22422e-05	0	1.3218e-06	0	1.38571	3.43509	1.85733	4.92728	4.88734	3.09479	1.70531	3.2748	2.11374	1.48124	3.438	1.23244	0.932353	1.15461	1.60078	1.55142	2.27631	6.36864	2.4438	1.35618	1.36782	7.06898	6.70094	4.19162	2.99152
Blast
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BLAST of TCONS_00065205 vs. Swiss-Prot (Human)
Match: AASS (Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Homo sapiens GN=AASS PE=1 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 1.963e-130
Identity = 209/453 (46.14%), Postives = 301/453 (66.45%), Query Frame = 1 
Query:   88 QEESSNVAIKQRVLVLGAGLVSGPLVEYLTRDKSLKLTTVSSVHDEGLELAKKYDIEPITMDVAKSQDRLQKLVSENDLVISLLPYTMHPMVANMCIENKKNMLTASYVTPEMKELGEKAEAAGITIFQEIGLDPGIDHLLAMNCFDSVAESGGKVVGYKSYCGGLPAPEDAANPLRYKFSWSPRGALLTALNGARYLKDGEIVEIQPG-SLMENTSAFEAYPGFNLEGYPNRDSTNYAEKYGLKDVKTMIRGTLRYKDFSDAMLAIHRLGFLDMSQKQGFE-EGNSTTWGTLMNQLLGTN-NLEGDNLEXXXXXXXXXXSVALKAIKELGLLSNDIEVITKGSPLDTLSAYLASTLVYAPGERDLVLLNNQIEIEWADKK-EIREISLVAYGDPKGYSAMARTVSVPAAIAAKMILDGEISTKGTVVPLRREFYDPILKRLETEGISYTSKS 1434
            + +S ++  +++VLVLG+G +S P++EYL+RD ++++T  S + ++  +L KKY+I P++MD+ K +++L  LV++ DLVISLLPY +HP+VA  CI NK NM+TASY+TP +KEL +  E AGITI  E+GLDPG+DH+LAM   D   E G  +  Y SYCGGLPAPE + NPLRYKFSWSP G L+  +  A YL DG++V +  G S ++  ++ + +PG NLEGYPNRDST YAE YG+    T++RGTLRYK +  A+    +LG ++      F  E N  TW  L+  L+G + + E D L+  V   +  ++  L+A + LGLL ++ +V    S LD LS +L   L Y P E+D++++ +   I       E + I LVAYGD  G+SAMA+TV +P A+AAKM+LDGEI  KG + P  +E Y PIL+R++ EGI YT++S
Sbjct:  471 RAQSLSMGTRRKVLVLGSGYISEPVLEYLSRDGNIEITVGSDMKNQIEQLGKKYNINPVSMDICKQEEKLGFLVAKQDLVISLLPYVLHPLVAKACITNKVNMVTASYITPALKELEKSVEDAGITIIGELGLDPGLDHMLAMETIDKAKEVGATIESYISYCGGLPAPEHSNNPLRYKFSWSPVGVLMNVMQSATYLLDGKVVNVAGGISFLDAVTSMDFFPGLNLEGYPNRDSTKYAEIYGISSAHTLLRGTLRYKGYMKALNGFVKLGLINREALPAFRPEANPLTWKQLLCDLVGISPSSEHDVLKEAVLKKLGGDNTQLEAAEWLGLLGDE-QVPQAESILDALSKHLVMKLSYGPEEKDMIVMRDSFGIRHPSGHLEHKTIDLVAYGDINGFSAMAKTVGLPTAMAAKMLLDGEIGAKGLMGPFSKEIYGPILERIKAEGIIYTTQS 922
The following BLAST results are available for this feature:
BLAST of TCONS_00065205 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AASS1.963e-13046.14Alpha-aminoadipic semialdehyde synthase, mitochond... [more]
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