TCONS_00065276 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065276
Unique NameTCONS_00065276
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2618

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065276 ID=TCONS_00065276|Name=TCONS_00065276|organism=Clytia hemisphaerica|type=transcript|length=2618bp
CCAGAAATTACTATACAAGAATCCTggtttttccttttcattgTCTTGTA
TGCAGCATCAGCAAGTGCAAAAATGTGAGGTggtctttcaaaaatttccc
tTCCTTTATATTCAGAAATAACTTCTTTTCCATAAATGTCCATGGTTTTG
TATGGATTGACAGAGACTACAACTTCGCCAATATAAGTATAAATCTTGTC
TTTCTCAAACCGTAACTTTAAATTGCTCATAAATTCATCCATTGTAATTT
GGTCTAGGAGAACAAAATCTCCCTTCCCATATTCCGAACCCTCAAAAAAC
GCCATGTTGTCGGTGTTTTGTTCCTGGTAAAAAAGGCTCTTAGTCTTACA
ATCTCAGCTCAACGGATCTGATGACCTGTGATTGAAGTGTGGTCATGTAG
ATGAAGAGTATGTATCGGTATTGATAACCACCAAACGACAGTGCCTCTTT
CTTTGAAATGTTTACAAAGTTTTGAATGAAATCTCACACACCTATTGAGC
TGCcatttttatttatgtttttctaaaaacaacACATCCGATTCGTCGAG
AGCAAAGTATATATTTTGTTCAAGCACTCACTTCCGTAAATTTTCACAAA
TATCGAATCTGCTTGATTTTTGTTCCGTAATTTATCACTATTGCTTACCG
TTGCTATGAACGTTGTCAAGGCCAATCAGTTCAGATTTGTTCGTCGTCGA
GGAAGGTTCCAGGGAAACGTCTCACATTTCATCATTGCTCAGTTTATTAT
TACTTAATTTAGTGTTTTATATTGTCTATTCAAAATGTATGGAAGATCAC
GGGAGAAGGAAGAAAGTATTTACAATTTGATCCCAAAAACTCCCGAGAAA
CCACCTAAAGCAGAGAGACATGTATCAAAATTTCACTCCACAGTCAAAGG
TGAATCTAAACATACTAAAAAGGAAAACAAGACCATGGGTCCATCAAAGG
TTACGGTTAATGAACCAGATCAATTTTTAAAGAAACGCTCAAAGCACCCA
ACTTTTCCAGACAAAAAAGAATTCAAGTATCCTGACAACGATCAAAGACG
CCCACCTGTTCCCAAACATACAGAGAAACCAGCCATGGGCATCAAATCCG
ATAAAAATTTCATCTCAACAAATGCTGTAGATAACATTATGTCTGTACCA
AAAAAACCAGCAGCTAATTACGTTGACACTCGAACTGGTACAGTCAATGC
ATTAGAACCATCCGGATTGACACCAAAATATTTGAACAAGAAAGAGTATG
GTAAAACACCGACTTATTTGATCAAGAGAAATGAAGAAGCAAAACAAGCA
CAAGCAGACTATGATGAATATGTAGAAGAATCGTTGAAACGTGGTGCAAT
GAAATGTCTCAATGAATCTGAACGACAAAACATTATTTCTGGGTTGAAAG
CCAACTGGGAGGAAATCCATCATCAATACCAAGGTTTATCAGTTGTCACC
GATACTGCACCAAAGAAAAATCGAAAAGAACGAATGGAAGCGGAAATGGA
CCAGTTAGAAAAAGATATCGATCTTTTAGAGAAACATCCGAAGATTTATA
TCGCAAATACTGGTATGGCTTATTGATGAGTATTATAGTTTCTTTGTAAA
TTTCATTTTGTGTgcgtcttttctttttatataagtctatattttctttt
ataaagtCTACCTTAAAAGtgtataaattttcgcgggtactaaATTTTAG
CGCGTACTTGATTTCGCGagtattttggcaaaaattcgcaatttttcaaa
agcaaaaaatcgcgaaattaaatacgcgggaaaattttcaaaataatagg
ccaaatttttgaaaatagaacaTAGAATGAATGAAAATAGAAGATAGAAT
GAATGCAAATAGAAGATagaatgaatgaaaaaagaagatAGAATGAATGA
AAATAGAGATCAGTtatattttgttacaatttaGATACTATTTTTTCACC
TTATACCTtataaaatcagtctttttcttgtttgaacctttttcttaaaa
aatatccaatttagtgaatcgcgaaatttagtacTCGTGAAATACGTTTG
TCAGTAATAATTTCGCGATTCGTGAAAATTTAGTAGccgcgaaaatatat
acacttaaggtattttatttttagCAATTCTGACCTTTGTTATTTTCTTT
GACTTGAAACTTGACCCCTGAAAATACGGAACCCAAATAATATTTTGTTC
TTTGATTCCCAAAACCGCTAACTGAATTCTTACCAGCCTGTATAACAGAT
TGGTTTACAGCCTAGTCAGGGCCTAGAACCTAGATCTTTCCGAATCAAAG
TTTTACTAATGTTTAGCCAAGTGCAAACGTTTGCTTGAAATCGTAACTTT
GCCTTCCGATTCGTCTAGGTAGACCTGATCCTGACCGTAAACTTTTAATA
AGTTAAGAATTGAAAATCCCATTAGATTGGTATTTGCTAAGGTTTACCCT
GATCATATATAAAACTCTTTAAGGTTGGTTCTTAATTTCTTGGTGGTTGT
GTCAAAtagctttttttctttattttttttgtaaaaacttcCAATGTATA
TTTTTAATAGcgatatattatttttattgaacATTTTAAAAGAACTAACA
ATAAACTTAAGAATTCCG
Run BLAST on NCBI

protein sequence of TCONS_00065276-protein

>TCONS_00065276-protein ID=TCONS_00065276-protein|Name=TCONS_00065276-protein|organism=Clytia hemisphaerica|type=polypeptide|length=263bp
MYGRSREKEESIYNLIPKTPEKPPKAERHVSKFHSTVKGESKHTKKENKT
MGPSKVTVNEPDQFLKKRSKHPTFPDKKEFKYPDNDQRRPPVPKHTEKPA
MGIKSDKNFISTNAVDNIMSVPKKPAANYVDTRTGTVNALEPSGLTPKYL
NKKEYGKTPTYLIKRNEEAKQAQADYDEYVEESLKRGAMKCLNESERQNI
ISGLKANWEEIHHQYQGLSVVTDTAPKKNRKERMEAEMDQLEKDIDLLEK
HPKIYIANTGMAY
Run BLAST on NCBI

transcript from alignment at scaffold_435:168928..178249-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065276 ID=TCONS_00065276|Name=TCONS_00065276|organism=Clytia hemisphaerica|type=transcript|length=9322bp|location=Sequence derived from alignment at scaffold_435:168928..178249- (Clytia hemisphaerica)
CCAGAAATTACTATACAAGAATCCTGGTTTTTCCTTTTCATTGTCTTGTA
TGCAGCATCAGCAAGTGCAAAAATGTGAGGTGGTCTTTCAAAAATTTCCC
TTCCTTTATATTCAGAAATAACTTCTTTTCCATAAATGTCCATGGTTTTG
TATGGATTGACAGAGACTACAACTTCGCCAATATAAGTATAAATCTTGTC
TTTCTCAAACCGTAACTTTAAATTGCTCATAAATTCATCCATTGTAATTT
GGTCTAGGAGAACAAAATCTCCCTTCCCATATTCCGAACCCTCAAAAAAC
GCCATGTTGTCGGTGTTTTGTTCCTGGTAAAAAAGGCTCTTAGTCTTACA
ATCTCAGCTCAACGGATCTGATGACCTGTGATTGAAGTGTGGTCATGTAG
ATGAAGAGTATGTATCGGTATTGATAACCACCAAACGACAGTGCCTCTTT
CTTTGAAATGTTTACAAAGTTTTGAATGAAATCTCACACACCTATTGAGC
TGCCATTTTTATTTATGTTTTTCTAAAAACAACACATCCGATTCGTCGAG
AGCAAAGTATATATTTTGTTCAAGCACTCACTTCCGTAAATTTTCACAAA
TATCGAATCTGCTTGATTTTTGTTCCGTAATTTATCACTATTGCTTACCG
TTGCTATGAACGTTGTCAAGGCCAATCAGTTCAGATTTGTTCGTCGTCGA
GGAAGGTTCCAGGGAAACGTCTCACATTTCATCATTGCTCAGTTTATTAT
TACTTAATTTAGTGTTTTATATTGTCTATTCAAAATGTATGGAAGATCAC
GGGAGAAGGAAGAAAGTATTTACAATTTGATCCCAAAAACTCCCGAGAAA
CCACCTAAAGCAGAGAGGTTTGTGAAATTTTCTTTTCCCATCTTCTTGTG
TTTTGTTGTTTTTTAAATTTCTGAAATTCTAAGTAAAGATAGGGTCAATT
TCTGTATTTCTGCATATGATATATTCTGCCCCTACCGCATGATTGTATGG
ATAATGGATCCTTAAGATAGTTTTTTTGGGAAAACACGGCCACGCAGCGC
AGTCCTTTGAATATAACAAATTATTACCAGACGATCTCAATCGAACGGAA
TCGACGATTGAACCAGTCGAACCAAATCGAACGCAATCGACCGATTGAAA
TTCGATTGTCGAACGCAATCGAATCTCAATCGAATATTACCGCAATTTTC
AGATTCGATTGATATTCGATTGATGTTCGATTGCGTTCGATCGTCGATTC
ATTGACCCCCCGGATTGTTCATCGCACAATTTCTACGGGAAATCGAAAGT
AATTTCATTTGGCTTGTGATGTTTGAGAGCTTGGATGTTGGAAAGCTGCA
AGAACAAAGCCAGACTATCTCAATCGAACGGAATCGACGATCGAACCAGT
CGAACAACAATCGAACCAATCGAATATTACCCAGAATTTTGACGTTCGAT
TGAGATTCGATTGCGTTCGACAATCGAATTTCAATCGGTCGATTGCATTC
GATTTGGTTCGACTGGTTCGATCGTGGATTCCGTTCGCTTGACATCGTCT
GGTTATTATGACAGCAGAAATCTTTTTAATGATATCACCATCTTTACTGA
TTTGTATTTTAAAACACAGCAGTTGCCTAGGTAATTTATCCCCTTATGTA
GATTAATGTATGTCTGTATGTGGAGTAATTAGTTATTCTAGACCGTTCCG
TTGCATACTCCTAAACGACTACACGTATTTTTGTTTTGAAACACACTAAA
ACATGAGGCTCAGAATGCCCAAAAACTAAGAAAAACCTATAAGAAAAATG
CTGAGGCTGAGAATGAGAATAAAACATTTTTTAGTTTGGTATTTTTAAAG
AACTTTCCAATCAAAACAAATGTTTTTTTTTGCATATGAAAAATAGGCTG
ATTACGTCAAAAAGTTTAGAAGCATGTAAGAAACATTCAAGGCTCAAAAT
GCCGATTTCCTAAGAAACATTGAGGCTGCTTGGTAAAACTTTTAAAAGGG
CAGCCATTGAAAAATTGTTCTGTTTGCATCGTAGCGGATGTTGAAAACAC
ACGCGGGCAGGCAGCAGTACACACTTTTTTATAAGAATATACTTTATAAG
AATATTTATGATGAAATTGGCAAAACTTTTTAGAATATCGCTAGAATACC
ACAATCATAAAATTTTGCAAGTGAACCTAAGAATGCAATTTTTAGAGCAT
TCTAGCAGATTCCAAATTTTTGCTTGACGTATGTATAACATGCTAGAATT
TGGCTGGGTTTGGATCCAAACCTATTAGAATACCGTAAGATGATTTCAAC
ATGATTTTTTCCAAATATTTAAGAATATACATTATGAATTGGAAAAACAC
TATTCTTTTTAAAAAAAAGTGTGTAGGGTGGAAATGTTTCAGGTTTTTTT
TAAATCACTCAGTCACATGCTGAACTCTGTTGCGTTTCTTGTGAAGTATA
ACTAATTAAAGGGATAATCAGATGGTTTGAGATATTTTGCCTGCAGATAG
CTTCTAGGATTTTAGGAAAAACCTCTAAATTTTTCGGTGTACTTATTTTC
CTAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTAGGA
AAATAAGTACACCGAAAAATTTAGAGGTTTTTCCTAAAATCCTAGAAGCT
ATCTGCAGGCAAAATATCTCAGACCATCTGATTATCCCTTTAACACTGTT
CTCCACGGTAGTTTCAAATTAATTTATCACTGTTATTTGTTCAAGAACAA
AGAAGTGCTAAAGAAAAAAGCTACATATTTAAAGAACAAAGCACAGGAAA
TTAGATATTACCTTAAAAAAGTTTTGTTCGAATTTGCAGGCTAACATTCT
CCCAAAGTTTGAGAAAAACCCTTTTGAAAAACTCTTTAAATACTTCATTC
TTTGAAATGGACAAGGTTTGGTTAAGTTCCGCAAAAGATGTCATAGGTCT
GCATAGGTCTTAAAGGTTTGCCTCCGCCACCTACTATTTGCTTGTGTTTT
AAAAAGGAGAGGCATCCCCAGTAAATAATTTCAAAGTGTCATGATTTCAT
GATTAGAAAGGTCATATTTATTCAAAAGAACTATCAGAGTATATAAACTA
CCGTATTACTTATTACTAGTATTTTTGTATTTTTAGGATGGGCGTTTTTT
CAAGGGGGTGTTTATCATAATAATTCATAACAAAGGTTGCTTTAATAAAG
TGAANAACTGCAAAGGGTGGTGGTCCTGAAAAAAAGTGTTGAAAAAGCAC
TTACTACACATCATGTCTTGTAGTAACTGCGTGCCCCCCCCTGCTCGCGC
GGCGAATAGAATATCTCGCAAATTAAAACATGCATAAAACTGACAAAATC
CTTTCTTTTTTATGCTTAGGTGACGTCACTATCGATCCTGACTTGACAAT
GGAGAACCAAATTTGGCAATGCATAATTATTACGAGCATTCGAGAAAGTC
TGTGTTGTGTGACGCAAAAATTGCGCGATGATAAATGAAGAGCTAGGAAA
ACGCCTACTGAAAATAAAAACTAGGAATTTATTGAATATTTCACTAATGA
AGTATCAAACTTTTTGTTTTTTGTAATTATTATAAATTCATAGTTTTTAA
ATACTATTTTTTGGAAGTCAAAGGACAATTAAAAAGTGAATTTAAGGTGA
TTGGATGGATATTGCTATTGGGCGGACGGGCAACACAAGTGTTTCAACCG
GTATTCCAACGAAGCCATATTTTGGTTTGTACAGAAATTTCGCCCGCTCA
AATCTAAACAACAAAATGGTCAATCTCACTAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAC
TAGTATTTTTGTATTTTTAGGATGGGCGTTTTTTCAAGGGGGTGTTTATC
ATAATAATTCATAACAAAGGTTGCTTTAATAAAGTGAATAGGAACCTTCA
TTTTGCCTTTTTATCATTGTTTGACATAGTTTCTACCCCCCTACATTTAG
GGGGGGCGGTCTTGGGTTTTGATGAACCAAAAGCAAGGGGGATGTTAAAA
GTACGACTTTCCTAGGGGGGAGTTGCCAGTTAAGGGGGGGGTCCTCTTAC
CTAAAGAGGGGTCTTGACCCCTCTAGAAACTATGGACTTTGAGTACTATA
TGAAAACTTAGAGACAAGAAAAGAGTCTTGTAAATCAGTTCAATACTAAA
AGAATACAATTACTATCATAATATCTAAGCTTTCCTTCATATCAAACTTC
TTTACAACTACTTGTTTTAAAAACGCCCCTCTCAGAGGGGAGATGTTTAC
TTGAGAGGATGTTTGTTGAAATTTTTTCCACAAAGGAGGGCATTTATAAG
AAGGGGGCATTTTTCAAAGTTATACAGTATGCTAACTGAATTTACTATCT
TTTCAGACATGTATCAAAATTTCACTCCACAGTCAAAGGTGAATCTAAAC
ATACTAAAAAGGAAAACAAGACCATGGTACGTGTTCATTAATTTTGTAAA
GCTCCTAATACTTTTCTTCTCAGTTTTAGAGTATTTCATCCGTAGTTCTG
GTATGGGAAGAATGTACGGTCATTCTTTAAATGCAGTTTTTATTTTAGGG
TCCATCAAAGGTTACGGTTAATGAACCAGATCAATTTTTAAAGAAACGCT
CAAAGCACCCAACTTTTCCAGACAGTAAGTAAATGTTGTTATATGAAAAG
TTTTCATTTTTGTAGTGCTCAAAGGCGTCCTTTTGGGCCCTCCCTCCTTA
GAAAGCCTCCGTCGTTAGATTCCTTTTTTCATTACATAAAATAAAATTGA
AACGTTGTGTTTGCACTTTTTAAAAGCATTCGGCTTGTACCTTTTAAATG
AAGTGGTGACTTTAAGTGCCCAGTAATTTAGAGTGAGTTTTTTAATAAAA
TAAGAATTACACATTTTTTCTTTCCATTCATAGAAAAAGAATTCAAGTAT
CCTGACAACGATCAAAGACGCCCACCTGTTCCCAAACATACAGAGAAACC
AGCCATGGGCATCAAATCCGATAAAAATTTCATCTCAACAAATGCTGTAG
ATAACATTATGTCTGTACCAAAAAAACCAGCAGCTAATTACGTTGACACT
CGAACTGGTACAGTCAATGCATTAGAACCATCCGGATTGACACCAAAATA
TTTGAACAAGAAAGAGTATGGTAAAACACCGACTTATTTGATCAAGAGAA
ATGAAGAAGCAAAACAAGCACAAGCAGACTATGATGAATATGTAGAAGAA
TCGTTGAAACGTGGTGCAATGAAATGTCTCAATGAATCTGAACGGTATGG
ATGATTTGACTTTTTTATTCTGGTGCCTTTATTTTCTTCTTTGGGGTACC
TAATAACTTGCGGCGCTAATTAATTTTTCGAAAATTTTCACCCAGGAAAT
TCTTATTCCAGCCCTTATTGATTTTTGGGAAAATGTTTTTAAAAATTCCC
TCTTTTGTCCTAATTCTGCTGTATTAGCGTCCTTTTGAAAAATTTTCCAC
CCAGAACATTTCTATTTCAACCCCCCCCCCCCCCCCCCCCCCCCCCANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCACCCGCGCTTC
CAAAATATCATGAATATTTTTAGTGAGGCGGAGGTAAACATGAGGTGAAA
GTTTAATGCCAAAATTGAATCCTATTGGTATATTTCAAAATCAAACACGA
GAATTTTAATATTTTTTTATTCTGACAGACAAAACATTATTTCTGGGTTG
AAAGCCAACTGGGAGGAAATCCATCATCAATACCAAGGTTTATCAGTTGT
CACCGATACTGCACCAAAGAAAAATCGAAAAGAACGAATGGAAGCGGAAA
TGGACCAGTTAGAAAAAGATATCGATCTTTTAGAGAAACATCCGAAGATT
TATATCGCAAATACTGGTATGGCTTATTGATGAGTATTATAGTTTCTTTG
TAAATTTCATTTTGTGTGCGTCTTTTCTTTTTATATAAGTCTATATTTTC
TTTTATAAAGTCTACCTTAAAAGTGTATAAATTTTCGCGGGTACTAAATT
TTAGCGCGTACTTGATTTCGCGAGTATTTTGGCAAAAATTCGCAATTTTT
CAAAAGCAAAAAATCGCGAAATTAAATACGCGGGAAAATTTTCAAAATAA
TAGGCCAAATTTTTGAAAATAGAACATAGAATGAATGAAAATAGAAGATA
GAATGAATGCAAATAGAAGATAGAATGAATGAAAAAAGAAGATAGAATGA
ATGAAAATAGAGATCAGTTATATTTTGTTACAATTTAGATACTATTTTTT
CACCTTATACCTTATAAAATCAGTCTTTTTCTTGTTTGAACCTTTTTCTT
AAAAAATATCCAATTTAGTGAATCGCGAAATTTAGTACTCGTGAAATACG
TTTGTCAGTAATAATTTCGCGATTCGTGAAAATTTAGTAGCCGCGAAAAT
ATATACACTTAAGGTATTTTATTTTTAGCAATTCTGACCTTTGTTATTTT
CTTTGACTTGAAACTTGACCCCTGAAAATACGGAACCCAAATAATATTTT
GTTCTTTGATTCCCAAAACCGCTAACTGAATTCTTACCAGCCTGTATAAC
AGATTGGTTTACAGCCTAGTCAGGGCCTAGAACCTAGATCTTTCCGAATC
AAAGTTTTACTAATGTTTAGCCAAGTGCAAACGTTTGCTTGAAATCGTAA
CTTTGCCTTCCGATTCGTCTAGGTAGACCTGATCCTGACCGTAAACTTTT
AATAAGTTAAGAATTGAAAATCCCATTAGATTGGTATTTGCTAAGGTTTA
CCCTGATCATATATAAAACTCTTTAAGGTTGGTTCTTAATTTCTTGGTGG
TTGTGTCAAATAGCTTTTTTTCTTTATTTTTTTTGTAAAAACTTCCAATG
TATATTTTTAATAGCGATATATTATTTTTATTGAACATTTTAAAAGAACT
AACAATAAACTTAAGAATTCCG

Coding sequence (CDS) from alignment at scaffold_435:168928..178249-

>TCONS_00065276 ID=TCONS_00065276|Name=TCONS_00065276|organism=Clytia hemisphaerica|type=CDS|length=3960bp|location=Sequence derived from alignment at scaffold_435:168928..178249- (Clytia hemisphaerica)
ACAAAACATTATTTCTGGGTTGAAAGCCAACTGGGAGGAAATCCATCATC
AATACCAAGGTTTATCAGTTGTCACCGATACTGCACCAAAGAAAAATCGA
AAAGAACGAATGGAAGCGGAAATGGACCAGTTAGAAAAAGATATCGATCT
TTTAGAGAAACATCCGAAGATTTATATCGCAAATACTGGTATGGCTTATT
GAAAAAAGAATTCAAGTATCCTGACAACGATCAAAGACGCCCACCTGTTC
CCAAACATACAGAGAAACCAGCCATGGGCATCAAATCCGATAAAAATTTC
ATCTCAACAAATGCTGTAGATAACATTATGTCTGTACCAAAAAAACCAGC
AGCTAATTACGTTGACACTCGAACTGGTACAGTCAATGCATTAGAACCAT
CCGGATTGACACCAAAATATTTGAACAAGAAAGAGTATGGTAAAACACCG
ACTTATTTGATCAAGAGAAATGAAGAAGCAAAACAAGCACAAGCAGACTA
TGATGAATATGTAGAAGAATCGTTGAAACGTGGTGCAATGAAATGTCTCA
ATGAATCTGAACGGGTCCATCAAAGGTTACGGTTAATGAACCAGATCAAT
TTTTAAAGAAACGCTCAAAGCACCCAACTTTTCCAGACAACATGTATCAA
AATTTCACTCCACAGTCAAAGGTGAATCTAAACATACTAAAAAGGAAAAC
AAGACCATGATGTATGGAAGATCACGGGAGAAGGAAGAAAGTATTTACAA
TTTGATCCCAAAAACTCCCGAGAAACCACCTAAAGCAGAGAGACAAAACA
TTATTTCTGGGTTGAAAGCCAACTGGGAGGAAATCCATCATCAATACCAA
GGTTTATCAGTTGTCACCGATACTGCACCAAAGAAAAATCGAAAAGAACG
AATGGAAGCGGAAATGGACCAGTTAGAAAAAGATATCGATCTTTTAGAGA
AACATCCGAAGATTTATATCGCAAATACTGGTATGGCTTATTGAAAAAAG
AATTCAAGTATCCTGACAACGATCAAAGACGCCCACCTGTTCCCAAACAT
ACAGAGAAACCAGCCATGGGCATCAAATCCGATAAAAATTTCATCTCAAC
AAATGCTGTAGATAACATTATGTCTGTACCAAAAAAACCAGCAGCTAATT
ACGTTGACACTCGAACTGGTACAGTCAATGCATTAGAACCATCCGGATTG
ACACCAAAATATTTGAACAAGAAAGAGTATGGTAAAACACCGACTTATTT
GATCAAGAGAAATGAAGAAGCAAAACAAGCACAAGCAGACTATGATGAAT
ATGTAGAAGAATCGTTGAAACGTGGTGCAATGAAATGTCTCAATGAATCT
GAACGGGTCCATCAAAGGTTACGGTTAATGAACCAGATCAATTTTTAAAG
AAACGCTCAAAGCACCCAACTTTTCCAGACAACATGTATCAAAATTTCAC
TCCACAGTCAAAGGTGAATCTAAACATACTAAAAAGGAAAACAAGACCAT
GATGTATGGAAGATCACGGGAGAAGGAAGAAAGTATTTACAATTTGATCC
CAAAAACTCCCGAGAAACCACCTAAAGCAGAGAGACAAAACATTATTTCT
GGGTTGAAAGCCAACTGGGAGGAAATCCATCATCAATACCAAGGTTTATC
AGTTGTCACCGATACTGCACCAAAGAAAAATCGAAAAGAACGAATGGAAG
CGGAAATGGACCAGTTAGAAAAAGATATCGATCTTTTAGAGAAACATCCG
AAGATTTATATCGCAAATACTGGTATGGCTTATTGAAAAAAGAATTCAAG
TATCCTGACAACGATCAAAGACGCCCACCTGTTCCCAAACATACAGAGAA
ACCAGCCATGGGCATCAAATCCGATAAAAATTTCATCTCAACAAATGCTG
TAGATAACATTATGTCTGTACCAAAAAAACCAGCAGCTAATTACGTTGAC
ACTCGAACTGGTACAGTCAATGCATTAGAACCATCCGGATTGACACCAAA
ATATTTGAACAAGAAAGAGTATGGTAAAACACCGACTTATTTGATCAAGA
GAAATGAAGAAGCAAAACAAGCACAAGCAGACTATGATGAATATGTAGAA
GAATCGTTGAAACGTGGTGCAATGAAATGTCTCAATGAATCTGAACGGGT
CCATCAAAGGTTACGGTTAATGAACCAGATCAATTTTTAAAGAAACGCTC
AAAGCACCCAACTTTTCCAGACAACATGTATCAAAATTTCACTCCACAGT
CAAAGGTGAATCTAAACATACTAAAAAGGAAAACAAGACCATGATGTATG
GAAGATCACGGGAGAAGGAAGAAAGTATTTACAATTTGATCCCAAAAACT
CCCGAGAAACCACCTAAAGCAGAGAGACAAAACATTATTTCTGGGTTGAA
AGCCAACTGGGAGGAAATCCATCATCAATACCAAGGTTTATCAGTTGTCA
CCGATACTGCACCAAAGAAAAATCGAAAAGAACGAATGGAAGCGGAAATG
GACCAGTTAGAAAAAGATATCGATCTTTTAGAGAAACATCCGAAGATTTA
TATCGCAAATACTGGTATGGCTTATTGAAAAAAGAATTCAAGTATCCTGA
CAACGATCAAAGACGCCCACCTGTTCCCAAACATACAGAGAAACCAGCCA
TGGGCATCAAATCCGATAAAAATTTCATCTCAACAAATGCTGTAGATAAC
ATTATGTCTGTACCAAAAAAACCAGCAGCTAATTACGTTGACACTCGAAC
TGGTACAGTCAATGCATTAGAACCATCCGGATTGACACCAAAATATTTGA
ACAAGAAAGAGTATGGTAAAACACCGACTTATTTGATCAAGAGAAATGAA
GAAGCAAAACAAGCACAAGCAGACTATGATGAATATGTAGAAGAATCGTT
GAAACGTGGTGCAATGAAATGTCTCAATGAATCTGAACGGGTCCATCAAA
GGTTACGGTTAATGAACCAGATCAATTTTTAAAGAAACGCTCAAAGCACC
CAACTTTTCCAGACAACATGTATCAAAATTTCACTCCACAGTCAAAGGTG
AATCTAAACATACTAAAAAGGAAAACAAGACCATGATGTATGGAAGATCA
CGGGAGAAGGAAGAAAGTATTTACAATTTGATCCCAAAAACTCCCGAGAA
ACCACCTAAAGCAGAGAGACAAAACATTATTTCTGGGTTGAAAGCCAACT
GGGAGGAAATCCATCATCAATACCAAGGTTTATCAGTTGTCACCGATACT
GCACCAAAGAAAAATCGAAAAGAACGAATGGAAGCGGAAATGGACCAGTT
AGAAAAAGATATCGATCTTTTAGAGAAACATCCGAAGATTTATATCGCAA
ATACTGGTATGGCTTATTGAAAAAAGAATTCAAGTATCCTGACAACGATC
AAAGACGCCCACCTGTTCCCAAACATACAGAGAAACCAGCCATGGGCATC
AAATCCGATAAAAATTTCATCTCAACAAATGCTGTAGATAACATTATGTC
TGTACCAAAAAAACCAGCAGCTAATTACGTTGACACTCGAACTGGTACAG
TCAATGCATTAGAACCATCCGGATTGACACCAAAATATTTGAACAAGAAA
GAGTATGGTAAAACACCGACTTATTTGATCAAGAGAAATGAAGAAGCAAA
ACAAGCACAAGCAGACTATGATGAATATGTAGAAGAATCGTTGAAACGTG
GTGCAATGAAATGTCTCAATGAATCTGAACGGGTCCATCAAAGGTTACGG
TTAATGAACCAGATCAATTTTTAAAGAAACGCTCAAAGCACCCAACTTTT
CCAGACAACATGTATCAAAATTTCACTCCACAGTCAAAGGTGAATCTAAA
CATACTAAAAAGGAAAACAAGACCATGATGTATGGAAGATCACGGGAGAA
GGAAGAAAGTATTTACAATTTGATCCCAAAAACTCCCGAGAAACCACCTA
AAGCAGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040926XLOC_040926Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065276-exon-scaffold_435-1575043694:177383..178249TCONS_00065276-exon-scaffold_435-1575043694:177383..178249Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1575043694:171424..171493TCONS_00065276-exon-scaffold_435-1575043694:171424..171493Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1575043694:171226..171301TCONS_00065276-exon-scaffold_435-1575043694:171226..171301Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1575043694:170606..170966TCONS_00065276-exon-scaffold_435-1575043694:170606..170966Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1575043694:168928..170171TCONS_00065276-exon-scaffold_435-1575043694:168928..170171Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1510915933:177383..178249TCONS_00065276-exon-scaffold_435-1510915933:177383..178249Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1510915933:171424..171493TCONS_00065276-exon-scaffold_435-1510915933:171424..171493Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1510915933:171226..171301TCONS_00065276-exon-scaffold_435-1510915933:171226..171301Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1510915933:170606..170966TCONS_00065276-exon-scaffold_435-1510915933:170606..170966Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1510915933:168928..170171TCONS_00065276-exon-scaffold_435-1510915933:168928..170171Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1491911889:177383..178249TCONS_00065276-exon-scaffold_435-1491911889:177383..178249Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1491911889:171424..171493TCONS_00065276-exon-scaffold_435-1491911889:171424..171493Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1491911889:171226..171301TCONS_00065276-exon-scaffold_435-1491911889:171226..171301Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1491911889:170606..170966TCONS_00065276-exon-scaffold_435-1491911889:170606..170966Clytia hemisphaericaexon
TCONS_00065276-exon-scaffold_435-1491911889:168928..170171TCONS_00065276-exon-scaffold_435-1491911889:168928..170171Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065276-proteinTCONS_00065276-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_435supercontigscaffold_435:168928..178249 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.2779	12.3999	5.63843	5.46393	194.46	142.643	92.9474	92.7181	60.1333	61.0458	43.4246	43.5534	5.74344	4.83743	4.59129	5.53785	7.89551	9.10317	7.2113	8.99333	13.7941	13.8422	9.70838	9.8795	133.644	88.6194	40.8312	36.858	14.972	13.9955
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027012Enkurin_dom
Blast
[Close]
BLAST of TCONS_00065276 vs. Swiss-Prot (Human)
Match: ENKUR (Enkurin OS=Homo sapiens GN=ENKUR PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 6.981e-84
Identity = 139/251 (55.38%), Postives = 175/251 (69.72%), Query Frame = 2 
Query:  812 ESIYNLIPKTPEKPPKAERHVSKFHSTVKGESKHTKKENKTMGPSKVTVNEPDQFLKKRSKHPTFPDKKEFKYPDNDQRRPPVPKHTEKPAMGIKSDKNFISTNAVDNIMSVPKKPAANYVDTRTGTVNALEPSGLTPKYLNKKEYGKTPTYLIKRNEEAKQAQADYDEYVEESLKRGAMKCLNESERQNIISGLKANWEEIHHQYQGLSVVTDTAPKKNRKERMEAEMDQLEKDIDLLEKHPKIYIANTG 1564
            E IYNLIP   ++PP+  R++S F +TVK + +  K   KTMGP+KV V  P  FLKK SK  T P KK F    N  ++P VP  T+ P MGI+S KNFI+TNA D IM V KKP   YVD RTG  + LEPSGL PKY+NKK+YG TP Y+ KRNEE K+AQ DYD Y++E+LK+ AMK L++ ER+ ++ GLK NWEE+H ++Q LSV  D+ PKK RK+R+E EM QLE DI ++EKH  IYIAN  
Sbjct:    8 ECIYNLIPSDLKEPPQPPRYISIFKATVKDDMQKAKTAMKTMGPAKVEVPSPKDFLKKHSKEKTLPPKKNFDR--NVPKKPAVPLKTDHPVMGIQSGKNFINTNAADIIMGVAKKPKPIYVDKRTGDKHDLEPSGLVPKYINKKDYGVTPEYICKRNEEIKKAQEDYDRYIQENLKKAAMKRLSDEEREAVLQGLKKNWEEVHKEFQSLSVFIDSIPKKIRKQRLEEEMKQLEHDIGIIEKHKIIYIANNA 256
The following BLAST results are available for this feature:
BLAST of TCONS_00065276 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ENKUR6.981e-8455.38Enkurin OS=Homo sapiens GN=ENKUR PE=1 SV=1[more]
back to top