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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066039 ID=TCONS_00066039|Name=TCONS_00066039|organism=Clytia hemisphaerica|type=transcript|length=497bp
AGAAACCAGAGTCTCTTGGTTATCGATGAGGGGGATGGttgtgaaaaaga
agaaagatctAAGAATGATTCTTCTACTGGTGCAGTAGTCACAGGTGATT
CAGGAGCTTCAACCACAGATATCACAACTTCAGTGACAACTTCAGAAACC
TCTGGTGTTGTTTCAGCTGCAACAACCGTAACTGAAGTCTCCAGATCCTT
TGTCAAAGCTTCACTAACAGCTGATAAGGGTTTCTGTTTGGGATAAATAT
TACGAAATTCATTTCTACAATTTCCAAATGCCATTCCAAGACCAAAAGCA
CCACCGAACGTCACTGGCCATGATTTACGACCAAATAACACTAACGACGC
CAACACGCCAATACCAGCTCCTGTAAACGAGTGAGTGATAGTGTTTGTAA
GACACCGGTCATATTTTTCACCGACCTCATCCTCTGATTTCTTAACATTG
TATATTGGCGCCATTGTTTgctcgttttttttttagtttgagtctga Run BLAST on NCBI transcript from alignment at scaffold_449:22823..23746- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066039 ID=TCONS_00066039|Name=TCONS_00066039|organism=Clytia hemisphaerica|type=transcript|length=924bp|location=Sequence derived from alignment at scaffold_449:22823..23746- (Clytia hemisphaerica)
AGAAACCAGAGTCTCTTGGTTATCGATGAGGGGGATGGTTGTGAAAAAGA
AGAAAGATCTAAGAGTACGTATTGCTTGTACATACAGTTAATTCACACTA
ATTCGATGTCGAACGGAAAGTCTAATTTGTTCGAATTACCGAAAGATTTG
AACTATAGATAGCATTATTCGACAGTTTTCCTTTGACGGAGACTGAGTTT
GAGAATTAGCTTGAATTATTTCGAATTATCGAATAATAGAAGTTCGAAAT
AGTAATGTCTATTGTTTTATATTTAACAAACCATTTCAAGATGAACATTA
GAATCTGGAGCTCCATTTCCAAATAAGTTGCAAGTAGTCGTTTTCGATAT
GGAGTTATTTTCACATTAAAGTCTAATCATCTTTCGTGTTCTAAGGCGTA
TTTCATTAGGGGGTCTAAATGTTATAACAATATTCATTGCAAAAGTTTCG
CACCAGTTCAAGTGACTTTTTATCATGTTCCGTTTATTCAGATGATTCTT
CTACTGGTGCAGTAGTCACAGGTGATTCAGGAGCTTCAACCACAGATATC
ACAACTTCAGTGACAACTTCAGAAACCTCTGGTGTTGTTTCAGCTGCAAC
AACCGTAACTGAAGTCTCCAGATCCTTTGTCAAAGCTTCACTAACAGCTG
ATAAGGGTTTCTGTTTGGGATAAATATTACGAAATTCATTTCTACAATTT
CCAAATGCCATTCCAAGACCAAAAGCACCACCGAACGTCACTGGCCATGA
TTTACGACCAAATAACACTAACGACGCCAACACGCCAATACCAGCTCCTG
TAAACGAGTGAGTGATAGTGTTTGTAAGACACCGGTCATATTTTTCACCG
ACCTCATCCTCTGATTTCTTAACATTGTATATTGGCGCCATTGTTTGCTC
GTTTTTTTTTTAGTTTGAGTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066039-exon-scaffold_449-1575043694:23683..23746 | TCONS_00066039-exon-scaffold_449-1575043694:23683..23746 | Clytia hemisphaerica | exon |
| TCONS_00066039-exon-scaffold_449-1575043694:22823..23255 | TCONS_00066039-exon-scaffold_449-1575043694:22823..23255 | Clytia hemisphaerica | exon |
| TCONS_00066039-exon-scaffold_449-1510915933:23683..23746 | TCONS_00066039-exon-scaffold_449-1510915933:23683..23746 | Clytia hemisphaerica | exon |
| TCONS_00066039-exon-scaffold_449-1510915933:22823..23255 | TCONS_00066039-exon-scaffold_449-1510915933:22823..23255 | Clytia hemisphaerica | exon |
| TCONS_00066039-exon-scaffold_449-1491911889:23683..23746 | TCONS_00066039-exon-scaffold_449-1491911889:23683..23746 | Clytia hemisphaerica | exon |
| TCONS_00066039-exon-scaffold_449-1491911889:22823..23255 | TCONS_00066039-exon-scaffold_449-1491911889:22823..23255 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_449 | supercontig | scaffold_449:22823..23746 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR007512 | DUF543 |
Blast
The following BLAST results are available for this feature:
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