TCONS_00066418 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066418
Unique Name	TCONS_00066418
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3150

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_455:310801..322148+

transcript sequence

>TCONS_00066418 ID=TCONS_00066418|Name=TCONS_00066418|organism=Clytia hemisphaerica|type=transcript|length=3150bp
TAGGCATTTGGTGACAAACTGCTTGGTAAAGAATATCGGATGGAGCTATG
TAATAgtggatttttatttttatactcCCAATCAAAAGTACAATCACTGC
TAATTACAAAGGACTCTCCGATCGacaaagatttacaaaaattaaaagaa
gtAGCATCAGTTGACATCAACATCGAACAATTACTTGTGGTACCAGCCTA
TTCTGAAGTTGGCGATGACGTCATAGCCTTGTTTTGCTTGTTCAACAAAA
TCGGTGCTAAAACTGGCTTCACCAAACTCGACGAAGAACTCATGCAGATG
GTGGTGAAAAATTGTCGACATATTGTTTGTAATGCTTTAGATTGGAAATC
ACAACTTATTATACAACGTCAAAACGAGagtTTGTTAGAAATTTCGAAAA
CCTTATTTAGCCATCTAGACGATGTGTCCATTTTACTGCACAAGATTATG
GAGGAAGCACGCAACTTGACTAACGCTGAACGCTGTTCACTCTTTCTTGT
CGATCACAATAGGGGAGAATTGATCGCTAAAGTTTTTGACGGCATCGAAT
CGGAGAATTCTTCAGAAATACGTATCCCAATAACGAACGGTATTGCTGGT
TACGTTGCTACGACAGGCGAAACTTTGAATATCAAGGATGCTTACTCACA
CCCTCTCTTTTATAAAGAAGTCGACCAAAAAACTGGATTCAAAACTAGGC
ATATTTTATGTTTTCCTATTCGCTCAGTATCTGAGCAAATTATCGGTGTA
GCTCAACTATGTAACAAATTAAATGGGAATTGTTTTACGAAATTCGACGA
AGAACGGACACTAGGATTTGCGATTTTTGTTGGTCTTTCGCTCGTACAGA
GTTTGCTTTACAAGAAAGCAACCGATGCCAAACAACGAAGCAAACTCGCC
AACGAACTTATGCTTTATCATATGATGGTCTCACAAGAAGAAATTGACAG
TTATGTGAAGGTTGCCATGCCAACGAAAGATTCTCTTCATCCGGATATGG
ATAAATTCAGTTTCATGCCAAGAATCTCTTTTGCTGAAACTGACAGCATA
AAGGTTGTTTTGAGTATGTTCAATGATCTCAATGTCATCAAACGTTGGAA
AGTTTCAGAATCAACATTAGTCAGATTTATATTAACAGTTCGAAGAGGGT
ATCGTGACGTTCCATATCATAATTGGACGCATGCGTGGACTGTGGCTCAT
TTCTCATACACTTTATTGAAGAAAACAAACGCGTTGGACTACTTAAGTGA
TTTAGAGGTGTTTGTCCTTCTGGTCTCTTGTTTATGTCATGATATTGATC
ACAGAGGAACCAATAACTCTTTCCAAATATCATCGCAATCTGTGTTAGCT
TCATTATACAGTTCAGCTGGTTCAGTGTTAGAACGTCACCATTTTGCACA
AGCAATGTGTATCGTTCAAACGGAACACAACAACGTCTTTGAAAGCCTAT
CAAGCACTGATTACAAACGAGCTTTAGATTTGATGCAAAAGATGATCTTG
GCCACTGATCTTGCCAACCATTTCAAGATTTCCAAACAGTTGGACGAACT
CGCTTCAACTGGAATACAAAAAGACGAAGCAGCTCACCGTGAACTTTTGT
TGTCATTATTCATGACGACTTCTGATTTGTCAGATCAAACGAAACCTTGG
GAGAGTGCTGTTAAAGTTTCTGATTTGTTATACCAAGAATTCTTCTCACA
AGGAGAAATGGAAAAATCATTGGGCTATCAACCAGTTAAGATGATGGATA
AAGATTTGGCAAGCATTCCAGATCTTCAATATTCCTTCCTCAATAATATC
GCATATCCTATTTATGAgAAACTGTCCCACTTCTTTCCAGAAACCAATTG
CATCTTGGGTAAtatcaaagaaaatcaaaagcaatGGTCCAAAATTAAGG
AGGGTTGATTATAGTTTATATTTATATCAAATATGTATCTTCAACTGTGT
aggtttcttttattttttggagCAATTAGTTTTGAAGTTAGCTTTGAGAA
AAATGCCTAATACACGAGAAGACTCTCTCTGGAAGACATGTTTTTAAATG
CGTTTAACAATCATCAAGCCTTGAAATATAAtaacacctccttctcacag
tagggtttttttagccagtgggggtaaaaataaaatatcaaaaatcgatt
gggattgatattcccatgtttttatgactggggattcgaattccattgtt
ttcgaacCAGAAAATacagtggggatagaaaaactagcacaatattttgc
aatgagtatttgcttatctgattattttaagatattttggccaatttttc
cagtgagaagggggtgtataataGTGACGATATGACAAagtcgatttttt
tttctcgaaacgTTCAAAAATCAAAGTCTGCGTCTGAGAGTGGTCTGTAT
TTCATCTGGCATTTTTTCGTGGACTGCGTACTACCCTTTCTCGGTCACGG
TTGTTTGCGGTGGCAAGAATCAAAAATCAATTGTTAGAGTAAGGAAAGCA
CAGAATTTTGTTCTAAAACTATTTATAGGTGTTCTATGtatttatacttt
tttgcttCCAATATATTATAACgacaagaaattattttttaatatatttt
tgcccttttatgttttgaaaattttcgttttACCAGCTAGCTAGCTCTTC
CAGGGAAATGTAGATTATAATTTTCTATccgaaaaaaagtattttaaatt
GTATAAATGCTCTCATCAGCAAAGCTCTGGACCCTTAAAATAAAACATGG
AAACTTTATTCCCTTTTTGGCGAAGTAAGGACATAATACTTGTTTTCAAG
AAGGTCATTTTCCCTGGAAGAGCTTAAATTCTTTTTTGGCAcaataatgt
ttattttttccctGTAAACATGGAAGAAGAAAagttaaattattttatta
gcACGTAGGTTTTTTATACGTAGAAAAGAAAGATGAGAAAATTTGTATAT
ATTTAACAACCGTTTGTTTTCCATTGTATATATTATTCCATCATTATTTT
ATCATTCGAGAGAAAAAACAAGATGACTAGTGGTAGTTATCCGAAGAAAT
CATTCGATCAAtcgagaaacttttttgtttatttaggtCCCTTATTTAAC
TggtcaacttttcaaaatttttgatagtTCCCAACTTTTTAGTTAGCgat

Run BLAST on NCBI

transcript from alignment at scaffold_455:310801..322148+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066418 ID=TCONS_00066418|Name=TCONS_00066418|organism=Clytia hemisphaerica|type=transcript|length=11348bp|location=Sequence derived from alignment at scaffold_455:310801..322148+ (Clytia hemisphaerica)
TAGGCATTTGGTGACAAACTGCTTGGTAAAGAATATCGGATGGAGGTACG
TGTTCGCCGCTTTCATATAAACTAAATatctctttttaaaatttcttatc
aGCAGCCTTAGAAGATACCTTTTTTGCATTTGATAGTAAGAGGGATCTCA
CATAAATCTTTTACTCTGCTATGGAAATCTTGTTTTGGAAAATTGTACGA
ATTCTGCGTTTCAAATTTCCATTAACATTTTTATTGATCCGATATTTTAT
CTACTCTCTCTTTCAGCTATGTAATAGTGGATTTTTATTTCTATACTCCC
AATCAAAAGTACAATCACTGCTAATTACAAAGGTATcagattttctttaa
ttttctcccttcttttcaaacatgaaaaataacttaactttaaaatttga
aacccATCAGTGTTTTTCATCGAAATTCCCTCTTCGTATTTCACGCCTTC
CATGAAAAAGAGCTGTTTTCAGAATCAACCAATCGAACCCACCTAAAAGG
CAAGAATTTTTGGCAGAATAAAAATTTGGTGGTTTTGGCCAAAAtgcgcc
aaattaagttcccgctaaattaaatttcctcataatttttttttgttcat
ccTCTCAATTTTACTCCCTTAAGGTATATCGATGTTTCGTTTATAaataa
gggttggaaaaatcagaaaatctcaGCCTCAGAAAATCTCAGGAAGAAAG
GGGAGTaaatcaactttttgaaatctggtcaaattagtcccgataagggt
cggaaaaaaacaaaaattttcctaatttgtgtttttttattcacGCTAAA
GGTAGGTTCGAAAGTCGGGTGGTTCGTACCCGTCAGCTCAGTACCCCTAT
TCCccctgtaaaaaaattcaaaccctGTAGAAGAAAGAATCCATTCAGCG
CTACGAACATTGNAAAtgaggaaaataagaacatgttaagaacattttta
ggcttgaaactgaacaagttaagaacatccgaaggcttcaaaaatcttat
acgttctaataaaaaaacgtgtagtaatACATAGCAGGGAGTGAGAAATT
ACATCGACTACTCACTTATTTAAGAGCTGTTGCAGCTTTTGATTTGTTTC
ACTTTCCCTTTTCTTTAGGCATTTGGTGACAAACTGCTTGGTAAAGAATA
TCGGATGGAGGTACGTGCTCGCCGCTTTCATAAAAACTAAATatctcttt
ttaaaatttcttatcaGCAGCCTTAGAAGATACCTTTTTTGCATTTGATA
GTAAGACAGAGGGATCTCGCATAAATCTTTTTCTCTGCTATGGAAATCTC
GTTTTGGAAAATTGTACGAATTCTGCGTTTCAAATTTCCATTAACATTTT
TATTGATCCGATTTTTATCTACTCTCTCTTTCAGCTATGTAATAgtggat
ttttatttttatactcCCAATCAAAAGTACAATCACTGCTAATTACAAAG
GTATcagattttctttaattttctcccttcttttcaaacatgaaaaataa
cttaactttaaaatttgaaacccATCAGTGTTTTTCATCGAAATTCCCTC
TTCGTATTTCACGCCTTCCATGAAAAAGAGCTGTTTTCAGAATCAACCAA
TCGAACCCACCTAAAAGGCAAGAATTTTTGGCAGAATAAAAATTTGGTGG
TTTTGGCCAAAATGCGCCAAACTAAGTTCCCGCTAAATTAAATTtcctca
taattttttttttttgttcatccTCTCAATTTTACTCCCTTAAGGTATAT
CGATGTTTCGTTTATAAAttagggttggaaaaatcagaaaatctcaGCCT
CAGAAAATCTCAGGAAGAAAGGGGAGTaaatcaactttttgaaatctggt
caaattagtcccgataagggtcggaaaaaaacaaaaattttcctaatttg
tgtttttttattcacGCTAAAGGTAGGTTCGAAAGTCGGGTGGTTCGTAC
CCGTCAGCTCAGTACCCCTATTCCccctgtaaaaaaattcaaaccctGTA
GAAGAAAGAATCCATTCAGCGCTACGAACATTGGGGTGTTCGTTCTATAA
TTATGAATCTCATTGATTTTTTTAACTCATACGTATTTCTTTTCAGGACT
CTCCGATCGacaaagatttacaaaaattaaaagaagtAGCATCAGTTGGT
ACGTTTCTTATTCACCAAGTACAGTTCTGAAATTCATAaactatttattt
ttgaattgacTTTGCATCCCCTTTTTGTCGCCAAATTTCTTGACTtgaat
ttctatatttttttaaatgcctcAGAAAATAACGACAATAAAAAATCtta
aagccagattgacattatgttttccgaggtctgaatcgctgcttCAAATA
CTCTGAGCTTGCATAAAGATTGCAGTTAaattcaaccaatcatcaaaaca
aaagatagcGCATGACGTAGCTTATTGTTCGATTCAACACTTCGATGTCT
TCACtttaatataacattttaataaCTAGAGAGTTTACAATGTTTTGACT
GCAAAGTTTCGATtaagaattggaatgaattgtcTGCGTTTTTAATGAAT
CTGTATAATGTTTTTGCAGAATAAGCAAACAGACTCATGAATAGATATAC
TGGCTAGATTATCAGTCTCATCTTTTTATAAANACAGACTCATGAATAGA
TATACTGGCTTTAAATTATCAGTCTCATCTTTTTATTACCCTTTTCCTAG
ACATCAACATCGAACAATTACTTGTGGTACCAGCCTATTCTGAAGTTGGC
GATGACGTCATAGCCTTGTTTTGCTTGTTCAACAAAATCGGTGCTAAAAC
TGGGTGAGAATTTCCTTTTCCAATAAAGCTTTAGGGGATTGTATACGTTT
ATCGTGCGTTAGTATAATCCGTTCGCAATATTACGTCGAAGTTTCTTTGT
AAGATAACTCTAGTGGTAAATACTTGAATGAATGCGCATACACGGAGGGG
CGTATCTCCTTCGTAgttctttttgaaaatcctcAAACCAAACTCAAAAG
ACGACAAAATACTTTctatggaaaaaaatattgatgtgTTGAATCTGGTA
TAGACAATAGGGTATTAGGGACCAAACGTGCCATCGTTCAAATTATTTCT
GCTATTCGAccaattttatatattttttactaTAGCTTCACCAAACTCGA
CGAAGAACTCATGCAGATGGTGGTGAAAAATTGTCGACATATTGTTTGTA
ATGCTTTAGATTGGAAATCACAACTTATTATACAACGTCAAAACGAGGTT
GGTTCATGAATTCACTGTTAAGTGTTTTGAGTCTTATTACCAACCTGTTA
GTTCAGAGTGTGTTGACGCCATTAACggttacaaaaattatttttaagga
GGACAATTCTTAATAGATGATTTTCCTAACAATTGAGAAATTACCAAGCA
AATTGATTGGTTGCCAGAGCTGCATAAGAGACTAAGACTGGTCAAGTACA
TGACCTTTTTTGACAATAATATCAAGGatgtttagattttttcctTGAAG
TTTCAGTAAACAATTTctctttctgtttttttttttagagtTTGTTAGAA
ATTTCGAAAACCTTATTTAGCCATCTAGGTAAGTTAAATCTCTTAACCAT
AGAAATTCAAATATCCTCGCAAAtcctttttaattttcaaggaGGAGTTT
TTAAGAACGTGGGTTATAAGTCATAACTCTATATCTTAAGTATTCGATTT
GTCTTCTGAGCGTTCTCAATACTCTATAGAATTCATGATCAAGTCTACAA
CATTTATTTTCAATTGATCATAAGTTActccaaaaatctttttgatcaTC
GATCCTTACCATGGTGTGACATATACTAAGGGTATACTACATTTTTCTAA
TCCACAGACGATGTGTCCATTTTACTGCACAAGATTATGGAGGAAGCACG
CAACTTGACTAACGCTGAACGCTGTTCACTCTTTCTTGTCGATCACAATA
GGGGAGAATTGATCGCTAAAGTTTTTGACGGCATCGAATCGGAGGTAAAA
TATGTGTTAACCACTCTTGAGTAAAAGTCTAGTTGTAGCATGTAGGTGCG
TTCATCTTTGCACAATAGCTGTTACCTCACTGTATTTCAAGATTATATcc
atccctgtctcaatgacccctgtgaaattttgaaatccaccgggatagtt
ttgaaaaaagtataatTTCAGTAGGTTTAAAATTGAGATCTCACTGAGGT
GAGCGAGATTTTCACCAGATCGAGAAGTTTTTCTCTTAAAGCATTTGCGG
CTCTTTGTCCTAGAATTCTTTGGCAtgtatttttttcgattttgacgaCC
GGAATAAGATcataaatttccaaattttgatcaGGTCAGAGAATTTCAAT
TGATTTTGCCGGGTTTACTCATTATCTCAGCGGGGCTTAAAATAAGGCCA
TTTTAGCTATATTCTTCACCGGGTCATTTACTGAAGCAATTCTGACCGgt
tcactgatacaggggtgtatataTTTAGATATCTTATACATTGAATTCCT
TTTTCTGAAACTAATGAAttgtattttcacttttcagAATTCTTCAGAAA
TACGTATCCCAATAACGAACGGTATTGCTGGTTACGTTGCTACGACAGGT
ACTTAAAATTATTTATTGTAAAACTTTCCGTAGCCCTTCTTACGGCTTAA
TGAAGTTGACACAAAATCAAAGTGCATATTATTGATATAGAGGGATACCT
GAACATATTTCCCGTATAtcaatttctctttttctttcagGCGAAACTTT
GAATATCAAGGATGCTTACTCACACCCTCTCTTTTATAAAGAAGTCGACC
AAAAAACTGGATTCAAAACTAGGTAAAAACTAACTTCGGATTCAAAAGTT
ATTTCTTcctcaatttttaaaatttttccagaAATAATTAACCTGTTAga
ttaattttctttaaaatatctttccaacggtgtacaTAAAAAAGTGTGCT
GAGAAAGATACAGTTTATACAAATTACCCAAAGTTGAATATTATATTCTC
TTCTTTTTATTTCCAGGCATATTTTATGTTTTCCTATTCGCTCAGTATCT
GGTGAGtttcttctttcatttcatCCATTCAAAACTTTACTAAACCTTTA
AGGTGAAATGGCCGGTAAACATTGCTTGTCTTTTCTATACAAatgataaa
gaataaaaaagaatttatatCAAGGACTATTATTTGTAAGCTTCAAAATT
CCAAATGGTAGAAAGTTTCCACCTaaataatttgtaaaacttTGTAAACT
AGTCCTCAAACGTAATTCTAAGGCGAATGGTGCTGATAATGTTTACTTCT
ATCTTTGGTTACAGAGCAAATTATCGGTGTAGCTCAACTATGTAACAAAT
TAAATGGGAATTGTTTTACGAAATTCGACGAAGAACGGACACTAGGATTT
GCGATTTTTGTTGGTCTTTCGCTCGTACAGGTATGTAGTATGCTGGTGTT
CAAAGTTTTGTAAACTCTCTATACTGACTTCATTCTACTATAGTTTGAAC
CCTCGGTACAGTTTTGAATTGTAGGGAGTGAGAAAATTATGACATCTTCC
CAAAAGCCATAGCCATCTTAATCTCTTACTTTATTGAAGCACATGGATTG
TGTAAAGGACATCATTTAAAGTATCAGGATATATCAGGAGATACCTTCAT
GATCATGTGCTTACACAAcatttcaaaacaatagaaacttttcCCCCTCC
CGAGCAGActagagtcgtttataatgcatgtaatacataGTATAGGTGTT
TAATGATGATACggttattgttacgggatttagtttgtataaaattgact
aaaatttgataaatccctccattactttttgctttatttctactgaaTTA
GTAGTCTACCTTGCTAGACTACCTTCCGAGACGTACGAgcacagtttttg
aaaaattattttgtttaattctgctttgtcagcatagaggtGCGTGCCTC
CTTTCTATATCATAATAAAGAATATAACTTAAGGCTATACAATATTAAAC
GAGTATGATTTAATTGTCACCTTTATCATTTACTTGTCCAGAGTTTGCTT
TACAAGAAAGCAACCGATGCCAAACAACGAAGCAAACTCGCCAACGAACT
TATGCTTTATCATATGATGGTATGTTGTTACACAAATAGCTCTACACtaa
aattttgttcttattaagtATATGAAAAGTGGTTTGAATATTTTCTATGA
ATTCTATGAATTCAATGTGTTATGAAGATGAATAGTTTCTCAATGAGTCC
ATCAGGTTCGGTCCAATGATCTGAGAACGTTGGAGAATAAATGTAGTCCA
CGAATCCTTTTttatttgcaaagaaaaaataacatcTAACTTAATACAAT
AGTGATCTGGGTTTTTACGCCAACTATGGTTACTCGTatatttttcatga
tattttcattttcactgctTACCAGGTCTCACAAGAAGAAATTGACAGTT
ATGTGAAGGTTGCCATGCCAACGAAAGATTCTCTTCATCCGGATATGGAT
AAATTCAGTTTCATGCCAAGAATCTCTTTTGCTGAAACTGACAGCATAAA
GGTATAATGATGATTAATTGATGACTTTTTACattggagtctctttaact
tgaatatctccttaactcgtACAAATTTGTGTTCTCCGTGCGgatttgag
ttatggagactccattgtATTAATATTATCCCATGACCCAGTCCATTCGA
CTTTCATTCAAATTAATCCCGTTAACCTAGATTTTTTCCTATATTTTAAA
GTCTTTGCAACTTTACAAGGAGATgtattgataattttttatctatatTT
GTAAGTCAGAGTCGATTTGCCAGTGTCTTGTAGAACTATCTTTTTGTCAC
CGTTTTTATTGATTTATAATTTACTCTCTTTCTCCAGGTTGTTTTGAGTA
TGTTCAATGATCTCAATGTCATCAAACGTTGGAAAGTTTCAGAATCAACA
TTAGTCAGGTATATGATCATTTCTAAGCTAAGCCCAAAGTTAAAGAGATG
ATCATATGGCCTAAGGTTTTTGGCCAACTAAAACCTTCCACATAAAGCAA
TTAAAATATCTAGTTTCTGTGCGGTTCTTAAGTTAAAATTCTATTATTTT
CATGCTATTATTATTTTCATACCTATAACTTTACTTGATTATCAGGACTT
TGGCACATAAACAGAGAAAAATAAGTCTTGTTAAGGACCATATAAGGATT
TTTCTCAAATGATGGTAATCTCATTAAATTCTCATTCAATTACACCGAGT
GCCACCATCGTGTCTGTAAACAGTTCCAATATCTACAGAGAATTCATTTC
CGTAGAGAGTCTGTACTACGCAACGTTATACGTGAGGCAAAGCCCCTTTC
TTTGAACATAAAATATGAGCAGGTTCTTTCTCTTTCTAGATTTATATTAA
CAGTTCGAAGAGGGTATCGTGACGTTCCATATCATAATTGGACGCATGCG
TGGACTGTGGCTCATTTCTCATACACTTTATTGAAGAAAACAAACGCGTT
GGACTACTTAAGTGATTTAGAGGTGTTTGTCCTTCTGGTCTCTTGTTTAT
GTCATGATATTGATCACAGAGGAACCAATAACTCTTTCCAAATATCATCG
GTGAGTCCAATGGGTGAAATCCCACTTTATCAAACATACTGTATTTCGCA
AAGAAGTAAATTTTGACATGtatgattttttacatttttagttttaatgG
ACATTATGTTTGATTCCGACGgttgatattttttaataaaacttgccaag
aaaaaatatatattttgaagAGGTACTCGTGTTATCTCTCTATTTCATTT
TGTTCTAGTTTTACCGATCATGAATTTCACGGTATAAATCCCTTATCTTT
CAGCAATCTGTGTTAGCTTCATTATACAGTTCAGCTGGTTCAGTGTTAGA
ACGTCACCATTTTGCACAAGCAATGTGTATCGTTCAAACGGAACACAACA
ACGTCTTTGAAAGCCTATCAAGCACTGTAAGTAAAGTGTTATCGTTATGG
TCTATCAGCTTAAAGCCCTATCCATATTACGGTCAAATAAAAGTGGAAAA
GTGGGACACTAAACACCGTTGTCTCATCAGAGATCTTTTATCCTACCAAT
ATAGttaaactgaaaaagaaaaaatgtcaaCGGGGATAGAACATATATTT
TTGAACAGGTTTCCACTTTAAAATCTATGGTTTACAGTAAAACTTCGTCA
CttcttaaaaaatctttgtcaCAACTAATTTTCACTTTTCGCAGAGTAAC
TTTTCCTCTTTAAGGTAGTGATTTAACCATATCACTAGCTCAAATTTACT
TGCGGCTATGTCTCTTTGCGTTTGATTTAAAAACATGGATGAACCGACTT
TTCAGGATTACAAACGAGCTTTAGATTTGATGCAAAAGATGATCTTGGCC
ACTGATCTTGCCAACCATTTCAAGATTTCCAAACAGTTGGACGAACTCGC
TTCAAGTAAGTGCACTATAAAAAGCCTTGGATTTAAactgtatgtttttt
tttctcgatagaATTGTTGAACTGCAATAACTTTTTTGAACTTAACATTA
ACATCTGAATCTCAACAAAATTTATACTCAATCATATAGAGggcgatttt
aaaatttaacttAAAAACGAACCTTTTAAGCAAGTACGATATGTTAGCCT
TTCAGCGAATGCTTTTTCGAAAGAATATTTTGTTAGAGTCGTTGGATTAA
TTTCTAACAACTAACGGAGAACAAAAATCAAGTCTTTGATAAATCCATAT
CAAAACTTCTTGTTTGTTGTATTTTTTAGCTGGAATACAAAAAGACGAAG
CAGCTCACCGTGAACTTTTGTTGTCATTATTCATGACGACTTCTGATTTG
TCAGATCAAACGAAACCTTGGGAGAGTGCTGTTAAAGTTTCTGATTTGTT
ATACCAAGAATTCTTCTCACAAGGAGAAATGGTAATCATCTTCGTATGca
tattcttttttttccagCTGATTCAAGTCTGTACAAGAGAGCACTTGCTC
TCGGAAACATACAATGAATGGAATGACTTCATGACGTTCTAAATCTACAG
GCCTACCTACTAAGCGTACAGTGATTTCGATTTTTGTCTCGATTTTCTGA
GAATTTTTGAAGACGCTGCCTTGTGACGTTAGCTTGAGAGCAGTGAGAAA
AGtaaaacaaagaagatttttggGAGAAAAGAAGCACAAAGATAGATGAA
AATCAACCATGAGACAGTTTTGTGAATTCAGGAACTTGTTTGTTACACAT
GTAATGGAACATGTGTCTTACACGGAAGTAGATGTTGcaagaaattttcc
ttttttttctattttcccaCGCGCACTTTTGGCATTTCGaattttcgaag
atttttgattttctttcgaaaaattttttggaGTTAGTGGGACTGGGAGA
AACCTGGGGCTTGAAGCAAAAATCGCTGCACGCTTGCTAGGCCTGTAGAT
GTAGAAGGACATTGatgattttcaatttatttataAATTTATCTGATTAG
GCTATTAGCCAGTGCCaagaaattgtttgaaattacGTTCGCGGTTTATC
TTACAGGAAAAATCATTGGGCTATCAACCAGTTAAGATGATGGATAAAGA
TTTGGCAAGCATTCCAGATCTTCAATATTCCTTCCTCAATAATATCGCAT
ATCCTATTTATGAGTAAGTTTATAGCCATCTGCATCTGgtgaaatattat
tattattatattattagtAGAATGGGGGAATCACATCTTCAATCCAGTGA
ATTGAAAATGTAACCCTCTATTTTCTATTTATTGAAAATGTAACcctctt
tttcttattttatattttaacttAACAAAGCTggttgaaaaataaaagtg
aaaaatgttcGATAAATAGTGCTTCCAttacaaataaaattgaaacagaC
TATATTCCACGGAGAAAGTAGAACACTTGATTTCGACTTTTGTCCTGTCG
TGGAGGGTTTGAGTGATAGTCTTTGGCCAAActataatcaaaatattttg
tttgtttgtttttaggAAACTGTCCCACTTCTTTCCAGAAACCAATTGCA
TCTTGGGTAAtatcaaagaaaatcaaaagcaatGGTCCAAAATTAAGGAG
GGTTGATTATAGTTTATATTTATATCAAATATGTATCTTCAACTGTGTag
gtttcttttattttttggagCAATTAGTTTTGAAGTTAGCTTTGAGAAAA
ATGCCTAATACACGAGAAGACTCTCTCTGGAAGACATGTTTTTAAATGCG
TTTAACAATCATCAAGCCTTGAAATATAAtaacacctccttctcacagta
gggtttttttagccagtgggggtaaaaataaaatatcaaaaatcgattgg
gattgatattcccatgtttttatgactggggattcgaattccattgtttt
cgaacCAGAAAATacagtggggatagaaaaactagcacaatattttgcaa
tgagtatttgcttatctgattattttaagatattttggccaatttttcca
gtgagaagggggtgtataataGTGACGATATGACAAagtcgatttttttt
tctcgaaacgTTCAAAAATCAAAGTCTGCGTCTGAGAGTGGTCTGTATTT
CATCTGGCATTTTTTCGTGGACTGCGTACTACCCTTTCTCGGTCACGGTT
GTTTGCGGTGGCAAGAATCAAAAATCAATTGTTAGAGTAAGGAAAGCACA
GAATTTTGTTCTAAAACTATTTATAGGTGTTCTATGtatttatacttttt
tgcttCCAATATATTATAACgacaagaaattattttttaatatatttttg
cccttttatgttttgaaaattttcgttttACCAGCTAGCTAGCTCTTCCA
GGGAAATGTAGATTATAATTTTCTATccgaaaaaaagtattttaaattGT
ATAAATGCTCTCATCAGCAAAGCTCTGGACCCTTAAAATAAAACATGGAA
ACTTTATTCCCTTTTTGGCGAAGTAAGGACATAATACTTGTTTTCAAGAA
GGTCATTTTCCCTGGAAGAGCTTAAATTCTTTTTTGGCAcaataatgttt
attttttccctGTAAACATGGAAGAAGAAAagttaaattattttattagc
ACGTAGGTTTTTTATACGTAGAAAAGAAAGATGAGAAAATTTGTATATAT
TTAACAACCGTTTGTTTTCCATTGTATATATTATTCCATCATTATTTTAT
CATTCGAGAGAAAAAACAAGATGACTAGTGGTAGTTATCCGAAGAAATCA
TTCGATCAAtcgagaaacttttttgtttatttaggtCCCTTATTTAACTg
gtcaacttttcaaaatttttgatagtTCCCAACTTTTTAGTTAGCgat

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041561	XLOC_041561	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_455	supercontig	scaffold_455:310801..322148 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.68823	3.26247	2.62899	2.38985	4.73658	3.90951	24.5213	26.4424	14.9259	17.8124	11.1162	11.2316	10.0536	7.92113	2.86029	3.99268	10.7331	16.4924	12.1568	13.5684	14.4351	13.564	9.09401	9.44113	13.6518	11.8244	10.061	7.38135	3.92156	3.93652

Blast

[Close]

BLAST of TCONS_00066418 vs. Swiss-Prot (Human)
Match: PDE2A (cGMP-dependent 3',5'-cyclic phosphodiesterase OS=Homo sapiens GN=PDE2A PE=1 SV=1)

HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0
Identity = 294/631 (46.59%), Postives = 431/631 (68.30%), Query Frame = 1

Query:    7 FGDKLLGKEYRMELCNSGFLFLYSQSKVQSLLITKDSPIDKDLQKLKEVASVDINIEQLLVVPAYSEVGDDVIALFCLFNKIGAKTGFTKLDEELMQMVVKNCRHIVCNALDWKSQLIIQRQNESLLEISKTLFSHLDDVSILLHKIMEEARNLTNAERCSLFLVDHNRGELIAKVFDG-IESENSSEIRIPITNGIAGYVATTGETLNIKDAYSHPLFYKEVDQKTGFKTRHILCFPIRSVSEQIIGVAQLCNKLNGNCFTKFDEERTLGFAIFVGLSLVQSLLYKKATDAKQRSKLANELMLYHMMVSQEEIDSYVKVAMPTKDSLHPDMDKFSFMPRISFAETDSIKVVLSMFNDLNVIKRWKVSESTLVRFILTVRRGYRDVPYHNWTHAWTVAHFSYTLLKKTNALDYLSDLEVFVLLVSCLCHDIDHRGTNNSFQIXXXXXXXXXXXXXGSVLERHHFAQAMCIVQTEHNNVFESLSSTDYKRALDLMQKMILATDLANHFKISKQLDELASTGIQKDEAAHRELLLSLFMTTSDLSDQTKPWESAVKVSDLLYQEFFSQGEMEKSLGYQPVKMMDKDLASIPDLQYSFLNNIAYPIYEKLSHFFPETNCILGNIKENQKQWSKI 1896
             GDK+LG+E    L       +  +  +Q   +T +     D+Q+L+ +   ++  + +L VP  S   D V+AL C FNK+     FT  DE ++Q        ++ + L ++ +  ++ + ++LL+++K LF+HLDDVS+LL +I+ EARNL+NAE CS+FL+D N  EL+AKVFDG +  + S EIRIP   GIAG+VATTG+ LNI DAY+HPLFY+ VD  TGF+TR+ILCFPI++ ++++IGVA+L NK+NG  F+KFDE+    F+I+ G+S+  SLLYKK  +A+ RS LANE+M+YHM VS +E    +   +    ++  +   F++ PR S  E D+   +LSM  D+N I  +K+   TL RF L V++GYRD PYHNW HA++V+HF Y L K     +YL D+E+F L +SC+CHD+DHRGTNNSFQ++S+SVLA+LYSS GSV+ERHHFAQA+ I+ T   N+F+  S  DY+R LDLM+ +ILATDLA+H +I K L ++A  G  ++   H  LLL L MT+ DLSDQTK W++  K+++L+Y+EFFSQG++EK++G +P++MMD++ A IP+LQ SF+ +IA PIY+ L   FP+   +   +  N++ W+K+
Sbjct:  279 IGDKVLGEEVSFPLTGCLGQVVEDKKSIQLKDLTSE-----DVQQLQSMLGCEL--QAMLCVPVISRATDQVVALACAFNKLEGDL-FTDEDEHVIQHCFHYTSTVLTSTLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQEIITEARNLSNAEICSVFLLDQN--ELVAKVFDGGVVDDESYEIRIPADQGIAGHVATTGQILNIPDAYAHPLFYRGVDDSTGFRTRNILCFPIKNENQEVIGVAELVNKINGPWFSKFDEDLATAFSIYCGISIAHSLLYKKVNEAQYRSHLANEMMMYHMKVSDDEYTKLLHDGIQPVAAIDSNFASFTYTPR-SLPEDDTSMAILSMLQDMNFINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHFSRKDYQRMLDLMRDIILATDLAHHLRIFKDLQKMAEVGYDRNNKQHHRLLLCLLMTSCDLSDQTKGWKTTRKIAELIYKEFFSQGDLEKAMGNRPMEMMDREKAYIPELQISFMEHIAMPIYKLLQDLFPKAAELYERVASNREHWTKV 898

The following BLAST results are available for this feature:

BLAST of TCONS_00066418 vs. Swiss-Prot (Human)

BLAST of TCONS_00066418 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PDE2A	0.000e+0	46.59	cGMP-dependent 3',5'-cyclic phosphodiesterase OS=H...	[more]

You are here

TCONS_00066418 (transcript) - C. hemisphaerica