TCONS_00067513 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067513
Unique NameTCONS_00067513
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067513 ID=TCONS_00067513|Name=TCONS_00067513|organism=Clytia hemisphaerica|type=transcript|length=743bp
TTCTTTGTTTCTAGACTTAATGAGATAAatgagaaaatttctttttcatc
atcCTTTTGAAAAATGGTTAATAGCAAACAGCGCCTCTCCCTTCATGAAT
ATTATATATTGGTGAAAAGGACCATTCTTGATTTCCAgaaTCCAATTACT
GGGCTCCTTCCACCAAGTTTATTTCATGGAAAGTTCAATGAAACGACCAA
CAGACATTCATGGGTCAGAGATAATGTTTACAGCATTCTAGCTGTATGGG
CTTTGTCAAGGGCATACAAAAAGAAGACTGATTTTGATGCAGAGAAATCC
AAACAATATGAGCTAGAGCAGAGTGTTGTCAAGTTGATGAGAGGCTTATT
AATGAGTATGATGCAGCAGATTCTGGTAAGACAGTGGTTGATGACACAGG
ATGGGGTCATTTACAAATTGACGCCACTTCTCTCTATCTCCTAACCTTGG
CACAAATGACAACTTCAGGGTTGCAGATCATTTTTACAAAAGATGAAGTT
GATTTTGTTCAGAACTTAGTTTTCTATATCGAAATGGCTTATCGAATACC
TgatTTTGGTATATGGGAGCGAGGAGATAAGACAAACATGGGATTACCAG
AACTCAATTCAAGTTCTATAGGAATGGCCAAGGCTGCTTTAGAAGCAATG
GNcacaaatcaacccttacagtgcactttccaaagtccaaaaaacctacc
cttaagggccgcacgtccggtaggtcacttacctggagtgccc
Run BLAST on NCBI

protein sequence of TCONS_00067513-protein

>TCONS_00067513-protein ID=TCONS_00067513-protein|Name=TCONS_00067513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=126bp
MVNSKQRLSLHEYYILVKRTILDFQNPITGLLPPSLFHGKFNETTNRHSW
VRDNVYSILAVWALSRAYKKKTDFDAEKSKQYELEQSVVKLMRGLLMSMM
QQILVRQWLMTQDGVIYKLTPLLSIS
Run BLAST on NCBI

transcript from alignment at scaffold_47:510408..524400-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067513 ID=TCONS_00067513|Name=TCONS_00067513|organism=Clytia hemisphaerica|type=transcript|length=13993bp|location=Sequence derived from alignment at scaffold_47:510408..524400- (Clytia hemisphaerica)
TTCTTTGTTTCTAGACTTAATGAGATAAATGAGAAAATTTCTTTTTCATC
ATCCTTTTGAAAAATGGTTAATAGCAAACAGCGCCTCTCCCTTCATGAAT
ATTATATATTGGTGAAAAGGACCATTCTTGATTTCCAGGTATTATGTTTT
TTTTTTGTTTTTTTTAAGAATAGTTATTGTTTTTTACATTTCCTAATTCA
TACCAGACTATGTGACAAAAAATTATACGTTTTGATAATTGTTGTTATAC
AGGAAACTCTTTTTTCTTTCAATTTTGATAATTCGATAAACATAAATGCT
TTCAGATGCTTCAACTTGGTTTCTATAATGATCATCTGAGCAATTTCAAT
TGATCAGCCAGACGGCACAAATCTTTGTATTACTTTCATTTAAATTTTTA
GCATAAAAAAGGCTGAATATCGTAAGAAAAATGACATCATTCAATTAACA
TATTATTAGCTAACAGAAAATTTGTAAGAAAAGTTATTTTTTTAGATCAT
AATCTGTACATGTTTTTTGTTTTGTTTTAAGAATCCAATTACTGGGCTCC
TTCCACCAAGTTTATTTCATGGAAAGTTCAATGAAACGACCAACAGACAT
TCATGGGTCAGAGATAATGTTTACAGCATTCTAGCTGTATGGGCTTTGTC
AAGGGCATACAAAAAGAAGACTGATTTTGATGCAGAGAAATCCAAACAAT
ATGAGCTAGAGCAGGTATTTTACAACCTCGTTCCCTTGTATTATTGGCTT
ACTGGTTGCACCAGATAATATTAGTTACTCGGCAAGCCTCGACCCCAATA
CGGTTTTTACTAACCCTGTATATCCCGTATCCCACCTCAAAACGACCTTG
CGGATTTATATCGTTGAAGTCCCTTTTCAAGTTTCCCAAGAGCATGATAA
AAACTAACAGAACTCTCTTAGTAGATACTTACATCAAAGAGCGAACTGTG
AAAGTGACATTCGAAAGCGCATTCGTCAATACGCAATGTCTTCTTTTTTT
CTCAATCGAACGTGAGGAAGACAGATACGGTATATATCCCACCTCTATGT
GATGTCTTTTAACCAATGAATTCGCTAGAATTTTAGGCAGGATGATTAAC
TGTTGACTTCTTTGAGGGTGTGTGTTGATATCAAATAAATTAATCCAATA
TTACCTTTTTTGAAAAGTGTTCACAAAAGTTAATAACAAGCTATTTTGAT
AGTTTCATTCAGTTTAACTATTGTTTGCCTTCATAGTGGTCCAATAAGGT
CTACTTAACTGCTATTAAAAGTACTATTTACGTTAAATAATAAAAAATAA
CAATCTACAATCCATTTTCAGAGTGTTGTCAAGTTGATGAGAGGCTTATT
AATGAGTATGATGCAGCAGGTACGCTATTTCTTTGTACTTAAAGAATAAA
ATGATTTTCACAAAGAACTTTATTAACCCTAGGTTATGTCATGTCTAACT
CTGTTTGAAGCCTAAAGCTCTTCTTCTCTATGAGCTGAGAGCTGCCTAAT
ATGTTAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTATTAATAAGCATACATCAATGTTCTTA
GCCAAATTACTCAATTTTTTGATGAGATAGATGTTTTATTGCTCACAAGG
TCTTGAATATGATGGAATATTTCAAGAGCATGATATTTTGGTTTCTAAAC
GTTTTTTTTATAAGAAACAAACGACTAAAGTTTTCCATAAGGAAACTATC
TATAAGATGCTATCAGAAACATATTTTGAATTTCCTTTGCCAAATACTTC
AGGTTAGAGTTGAAAGCCTTGAAGTCACAATTTTTCCATTGTCATAAACA
TTTTTTTTAAGGCTTATAGTAATTTACGGAATAAAATTCCGCCTTTTAAT
TTACGGAATTTTATTCCGCAAATTACTAATCTACGGAATACGTTGATATC
TCTTGAAGCAATAGAGGAATAATGTTCAAACTTCACACATGTCTTTAAAA
TGGATCAATGCTGTTACATGCCAAATTTGGGAATATGAAACCTACGTAAA
CCGTAATCACGGCCAATAAAGCATTTAGTGCCGTACTGATTACAAAAATT
CCGCAAAATACTAATCTACGGAATATTCAAATAACTCTCGAACCGATGTA
TGTCTTAAAACGAAATTTGGCACGTATCTTAGTATCCATAAGACTCTGCT
TCATGCCAAAAATCAGCTCTGTAGTACTTTGTGGACGGGAGTTACATAAG
AAAAACGGAAAATCACGTAGTCATCCTATAACCGTTCACCACCAAAACTT
AGAAATGCTCTAATTCAAGGAGAAATTGGACCAACAAGCCCAAATTTGGT
GTGAACACGTAAGATATATATGAAAGTCCTCTCTAAAAAAATTAAATCCC
CTACCCGACGTGGGAAGAAGATACGTAAGAAAAACGTAATGTGACGTAGT
GCAAAAATACAAGTCTGCGTATCTATGGAACGGATATGTTTCCCAACAAG
AAAATTTGCACAAGGTAGCCCCTTTGTGACAAAAGCTCACATGAAAAATT
TCAGAGCAATACAATGACGTCATCGAGAGTTACGTTGAAATTCCGCAAAT
TACTAATCTACGGAATTCTCAAATAACTTTCGAACCGTTATATATCATGC
AGCGAAATTTGGCACGTGTGTTACTATCTAAAAGACGCTGCTTCACGCCA
AAAATAAGATCTGTGGTACCTTGTTGACCGGAGTTACGTAAAAAAAACGT
AATTCGACGTAGTGCAAAAATACCAGTCTCCGTATTTCCGCAACCAATAA
GTCTCACAACATGAAAATTTGCACAGAGTAGCCCCTTTGTGATAAAAACT
CACAAGCCAAATGTCAGATCAATACGAAGACGTCATCGGGAGTTACGTTG
AAATTCCGCAAATTACTAATCTGCGGAAAAATATTCCGCAAATTACTAAT
CTACGGAATATTCAAATAACTCTGGAACCGTTCCATATCTTGAAACGAAA
TTTGGCACGTATCTTAGTATCCATAAGACTCTGCTTCATGCCAAAAATCA
GCTCTGTAGTACTTTGTGGACGGGAGTTACATAAGAAAAACGGAAAATCA
CGTAGTCATCCTATAACCGTTCACCACCAAAACTTAGAACTGCTCTAGTT
CGAGGAGAAATTGGATCAACAAACCCAAATTTAGTGTGAACACGTAAGAT
ATATATGAAAGTCCTCTCTATAAAAATTAAATCCCCTACCCGACGTGGGA
AGAAGATATGTAAGAAAAACGTAATGTGACGTAGTGCAAAAATACAAGTC
TGCGTATCTATGGAACGAATATGTTTCCCAACAAGAAAATTTGCACAAGG
TAGCCCCTTTGTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTACTAATCTGCGGAATAAAATTCCGCAAATTACTAATCT
ACGGAATTCTCAAATAACTTTCGAACCGTTATATATCATGCAGCGAAATT
TGGCACGTGTGTTACTATCTAAAAGACGCTGCTTCACGCCAAAAACTAGA
TCTGTTGTACCTTGTTGACGGGAGTTACGTAAGAAAAACGTAATTCGACG
TAGTGCAAAAATACCAGTCTCCGTATTTCCGCAACCAATAAGTCTCACAA
CATGAAAATTTGCACAGAGTAGCCCCTTTGTGATAAAAACTCACAAGCCA
AATTTCAGATCAATACGAAGACGTCATCGGGAGTTATATTGAAATTCCGC
AAATTACTAATCTGCGGAATAATATTCCGCAAATTACTAATCTACGGAAT
ATTCAAATAACTCTCGAACCGTTGTATATCTTAAAACGAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGAGTTACGTTGA
AATTCCGCAAATTACTAATCTGCGGAATAAAATTCCGCAAATTACTAATC
TACGGAATTCTCAAATAACTTTCGAACCGTTGTATATCATGCAACGAAAT
TTAGCACGTGTGTTAGTATTTTGAAGACGCTGCTTCACGCCAAAAAACAG
ATATGCAGTGCCTTGTTGACGGGAGTTACGTAAGAAAAACGTAATTCGAC
GTAGTGCAAAAATACCAGTCTCCGTATTTCCGCAACCAATAAGTCTTACA
ACATGAAAATTTGCACAGGGTAGCCCCTTTGTGATAAAAACTCACAAGCC
AAATGTCAGATCAATACGAAGACGTCATCGGGAGTTACGTATAAATTCCG
CAAATTACTAATCTACGGAATATTCAGATAACTCTCGAACCGTTGTATAT
CTTAAAAAGAAATTTGGCACGTATCTTAGTATCCATAAGACTCTGCTTCA
TGCCAAAAATCATCTCTGTTGTACTTTGTTGACGGGAGTTACATAAGAAA
AACGGAAAATCACGTAGTCATCCTATAACAGTTCACCACCAAAACTTAGA
ATTGCTGTAATTCGAGGAGAAATTGGAACAACAAGCCCAAATTTGGTGTG
AACACGTAAGGTATATATGAAAGTCCTCTCTAAAAAAATTAAATCCCCTA
CCCGACGTGGGAAGAAGATACGTAAGAAAAACGTAATTTGACGTAGTGCA
AAAATACCAGTCTCCGTACTTCCGCAACCAATAAGTCTCACAACATGAAA
ATTTGCAACTCACAAGCCAAATTTAAGATCAATACGAAGACGTTATCGGG
AGTTACGTTGAAATTCCGCAAATTACTAATCTACGGAATAAAATTCCGCA
AATTACTAATCTACGGAATTCTCAAATAACTTTCGAACCGTTATATATCA
TGCAGCGAAATTTGGCACGTGTGTTACTATCTAAAAGACGCTGCTTCACG
CCAAAAATCAGATCTGCAGTACCTTGTTGACGGGAGTTACCAGTTAGTTC
AATGCAAAATCTCGTATTACCATATTTGGAAGAAACCATTGTGTAATGTT
ATATAAATGTTCTACATCACATATAATGCGCATGCGTAAATTTAAACCAC
AAGTGATTATTACACGCGTTGATATACCACGAAATGGAGACAAAAGGGTG
GTCATTNGCAGTGAAAAGGTACCATAACAGTGTATTTTACCGAACGTTTC
TCGCCCTTACAGTGTAGTTTGATTGCATATCAAGTTTTGCTAAAGCCATC
AAAGAGGTCCCATTGCCCAATGGAATTGCTTCATTTTCCAACCGACCAAT
GACCTTATAAAAACGTTAAAAGGTTTTCGCTCATTTTGTGAGAAAGCGGA
GACCGGCCTTTACAAGGAAAATTCTTCTCCTTGTAAATTTATTACCAGTC
CCCTAAAAAGCTGACTGCGCCGCTAAGGGTCGAAAGGGGTATTCTCTGGC
GTCCAAAAGTAGCATAAAAAACGCCTGGAATTTACGGGGACGAGGTTGAA
GAAAAACGTTAAAGGGATGTAACATTCCGATCTGACTATTAAAATAGCCG
CTCAAGTCAGCTGGGTTTGAAATAATAAATTGCATTTAATACCTTATCGG
GGAAAAANGGGTTGGAGACCCAAACAATAGCATAATTATACTAATTATGC
TAATAATGATGTAATCTTTACTATACGAGATTTTTCATTGACCGCCCTCT
TACATAAGAAAAACGGAAAATCACGTAGTCATCCTATATCCGTTCACCAC
CAAAACTTAGAACTGCTCTAATTCGAGGAGAAATTCAAGCAACAAGCCCA
AATTTGGTGTAAACACGCAAGGTATTTATGAAAGTCTTCTCTGAAAAAAT
TGAATCTACTCCCCGACGTGGGAAGAAGATACGTAAGAAAAACGTAATAT
GACGTAAATATTTTATTAGGCTAGCCTCTCCTATTTTTTGCACTTTGAGC
CTCAAATGGTTCTTATCATGTTCTTATTTTTAGGGTTAAACTTAAGTATT
TCAGAATTTATACCCAAGTTTTACTATTTTCCCCCTAAATTGCTNACTTT
TGCCCAATTTTTTAAACCCCAACCAAAATTAAAATCTAAATTTTTTACAC
CTTTATTAACCGAAATTAGTGCTTTAAACGTCGAATTACAAAATCTTTTT
TGGAGCTAGTGAAGGAAACCATTTCATTTGGACAATTTAGTTGGGTGAAA
GTGACTAAATTGTAAATTTTGTCAGGGAAAAGTGACGAATTTGATATTTT
GGTCGGGGGAAAGTGACGAAAATGCCTCTAGGCGACGAAACTTTTCCCTG
ACGAAAAAAACCCCGTCTAAATAAAACTCTGACATTTTTTTTCCCGATAA
GGCATTCCCTTGAGAACGAACCGAGTCCGAAACATGTCGGGAAAATTCAA
AATATAATAGCCGCATTCTTCTTCACCGTTCAACATAAATCGCATTTAAG
GGCTCTGGTCATAGTGAAAAATCAATTTCAGAATTTGAAGATAAGACCTT
ATGTTTTCGCTTCTTTGACATGTTTAAGAACAAACTGCTTTTGTAAAAAT
GAATTTAAGTAATTACATCATGAGTAATTAAGAAATAAGTGTGGCATGGA
CCTTAATAAAACGTCAAAACGACGCTTTTCATATACTTTTCACAAAAAAA
GCCTAATTTCCTTGGGGAAATCATTTTATTGTTTCAAACTTTTTTTTAAG
TTAATGAAAAATAATTTCTTTATTTAGATTTTGTACGGAAAAATTTTCTA
TTTGGCTACATCCTACGTTATAGCTGTTTTTGTATGGAAATTTAATGGAG
AAAATTGCCAAAAATGAGGTTTTTTGGAGATTTTAAAGGAAGGATACTTC
CACAAAAATTTTCCGAAATTGTATTTTTAGATACTTTTAATAGATACATT
ACCTGAACCAAAAAAAATTCCAAAATGTTTGATTTTTACCAAGATTAGGG
CTTGAAAGGTGAAATACTCTTCTTCGGAAAACTCTTTGTTTTCTTCTTCA
TTAAATTTTTTCATCTCAATTTTTCGATTTTTAAATTCTAAAAAGGTAGG
TTTAACAGGACATATAAAAAAAGTTATACATTAATCTTTTTAAAATGCAG
AAATTGCCTTGAGCATTTAAGTTGGTGTAAAATCGAAAAATTGGGTATGT
CCCTTAATATATATTAAGATAAATTTCTGCAACCTCTTTAGATGAGGTTG
CGGGTCTTGTCTGATTTGCTTTTTCAGACCTTAGCTGAGAAAATGAAAGG
CAGAGCGATTATGTAGTAGGGCACTTGCGAGAGCTTGCTAACTTAACCAG
CTTTTCCTTGTAACTGTACTGAGCTGAAGTACGGGTCAGATCAGCGAGGT
AAATTTTTCAGTGATGACATTTTCATACTTTATGAAGGCAAAAGACCCCG
AGATGCCCTAGACACTTTTAGACCAGTTTAGACCACAAAAGAGAAAACAA
TATGACCTTCTCTTCATAAAAAGATTATCTTCCAAGAATGAAGAGTGAAT
CATCCCTATTTATCATTTTCAAAAATTAATAGTAAAAGTTTAAAGAGAAA
TTTTATAGGAAGTAAGCGAAGTAGGATAGAAACAATAACACACTCATGGG
ATTTTGAATTTAGCATGAGTTGTTGCAGTAAACAGACTGTTCACATTTAA
AAATCATAATGGTTGGTGAGGTCCAGTCAAAACACAGATTTGATCTGTAG
CGTCACACGCTTCACCTTGTCTCAATAGATGAGTCAAGTTGAAACAACTA
TCGCAAAACAAACTCTCTGGTAATTTTTCTTAACTTCAGAAATAGTAAAT
ACCCTATCTTATGTTACACAAATTGGGGGGCACAAATTGAGGGTTTTTAT
TCCGTGGGAATTGGGCCATATAAATTCTTCAACGGAGAAAAGCTTCATAT
TCCCTTTGGGATAAAAAGAAGCTGGGTGATTTTATTCATTCATACAAGCT
ATTATCTAAAATATTAAAAGACTTACCGTTTTTTTGCAAGACTTCATCGT
TCCTGACAAACACAGGACACAAGCCAAAAATAGATCAATATCACTATCAC
TGGAAGTATATATTTTGACTTTTTCATCGCAAACTGTAGTGTGATAGTTT
TAGAATCCAATCTAAAAAATTTTCCTCTCCAACTCCTTCAGGTCAAAGGA
AAATTTGAGTATTTGAATGAAGTAAAACATTTGCATCAGTCATCAAAAGG
GGCTATCTTGTGCAAATTTTCTTGTTGAGAAATTTATTTGTTCCATAGAT
ACGCAGACTTGTNGTGCAAATTTTCTTGTTGAGAAATTTATTTGTTCTAT
AGATACGCAGACTTGTATTTTTTCACTACGTCACATTACGTTTTTCTATT
GGTTAGGGTTATACACAGACCAGTATTTTTCCATTACGTCCAATAACGTT
TTTTCTTACGTAACTCCCGTCAACAAGGTACCACAGATCTGATTTTTGGC
GTGAAAGAGCGTCTTTTAGATAATAACACACGTGCCAAATTTCGTTGCAT
GATATATAACGATTCGAAAGTTATTTGAGAATTCCGTAGATTAGTAATTT
GCGGAATATTTTTCAGCAGATTAGTAATTTGCGGAATTTCAACGTAACTT
CCGAAGACGTCTTCGTATTGATCTGAAATTTGGCTTGTGAGTTTTTATCA
CAAAGGGGCTACCCTGTGCAAATTTTCATGTTGTGAGACTTATTGGTTGC
GGAAATACGGAGACTGGTATTTTTGCACTACGCCGAATTACGTTTTTCTT
ACGTAACTCCCGTCAACAAGGCACTGCAGATCTGATTTTTGGCGTGAAGC
AGCATCTTTTAGATACTAACACACGTGTCAAATTTCGTTGCATGATATAT
AACGGTTCAAAAGTTATTTGAGAATTCCGTAGATTAGTAATTTGCGGAAT
TTTATTCCGCAGATTAGTAATTTGCGGAATTTCAACGTAACTCTCGATGA
CGTCATTGTATTTCTCTGAAATTTTTCATGTGAGCTTTTGTCACAAAGGG
GCTACCTTGTGCAAATTTTCTGTTTGGGAAACATATCCGTTCCATAGATA
CGCAGACTTGTATTTTTGCACTACGTCACATTACGTTTTTCTTACGTATC
TTCTTCCCACGTCGGGTAGGGGATTTAATATTTTTAGAGAGGACTTTCAT
ATATATCTTACGTGTTCACACTAAATTTGGGCTTGTTGGTCCAAATTCTC
CTCGAATTAGAGCAGTTCTAAGTTTTGGTGGTGAACGGTTATAGGATGAC
TACGTGATTTTCCGTTTTTCTTATGTAACTCCCGTCCACAAAGTACTACA
GAGCTGATTTTTGGCATGAAGCAGAGTCTTATGGATACTAAGATACGTGC
AAAATTTCGTTTTAAGACATACATCGGTTTGAGAGTTATTTGAATATTCC
GTAGATTAGTAATTTGCGGAATTTTTGTAATCAGTACGGCACTAAATGCT
TTATTGGCCGTAATTACGGTTTACGTAGGTTTCATATTCCCAAATTTGGC
ATGTAGCAGCATTGATCCATTTTAAAGACATGTGTGAAATTTGAACATTA
TACCTCTATTGCTTCAAGAGATATCAACGTATTCCGTAGATTAGTAATTT
GCGGAATAAAATTCCGTAAATTAAAAGGCGGAATTTTATTCCGTAAATTA
CTATAAGCCTTTTTTTAATACACTTGTTTTGAATTACTTTTTTATTCAAG
AAGAAGAAATAATCAAGGTAACAAAACCAAAATGGGCCCTGGGGGCCTAG
CAATTCTACAATTCCTTTTTTCAANTTTTTTTTATAAGAAACAAACGACT
AAAGTTTTCCATAAGGAAACTATCTATAAGATGCTATCAGAAACATATTT
TGAATTTCCTTTGCCAAATACTTCAGGTTAGAGTTGAAAGCCTTGAAGTC
ACAATTTTTCCATTGTCATAAACATTTTTTTTAATACACTTGTTTTGAAT
TACTTTTTTATTCAAGAAGAAGAAATAATCAAGGTAACAAAACCAAAATG
GGCCCTGGTGGCCAAGCAATTCTACAATTCCTTTTTTCAAATTTTACAGC
CCATTCATTAAAAGCCAAAAAACATGACAATGAAGAGCTAAGTTTGAAAA
AAAAACAAAAGCCTTCGCAAACCACTAGATGGAAATTCTTGGTATTAGCA
GATTCTCATACATTTCTGCAAAAAAGTACCCTTTTTTTTTAAACTTCTGG
ACTAGATTCAAGATCTCTCATGTAGACATGTATTGATATTCGAAAAACAT
ATTCGTCTCTACAGCATCTGCTTCCATTACCATGAAAAGGTTGAAAGATT
TGTAAAGATACAAATTGTGGTTGCAAAGCATGCCATTTGAGAGCCCCCCC
CCAGCAGACCTTTAATTCACACAATCACGCATTTTTTTCGACTTTCACAC
ATTCCTGCAATTTTTTTCGAAATTCTTGCAATTTCTATTTACGCGAAGTT
TTCCTTTTCACATATTACGCAGCTTTTTAAAAATATTAACCCTTTCATGC
AAAAGAAAAAGCCCATTCAGGCATTCATGCAAGCCACTGGGGGCATTTAA
ATCACATTCTTAATTCCCTGCAAACATTTTGTTTTCTTAGATTCTGGTAA
GACAGTGGTTGATGACACAGGATGGGGTCATTTACAAATTGACGCCACTT
CTCTCTATCTCCTAACCTTGGCACAAATGACAACTTCAGGTACAGTACAG
TTTGCTAATATACCTCATTTGATTGAGTTTGAAAACCAATTTATAAGAAT
TAAAATTTGATTTGGAACTGATGATGTTCTTTCGTTCGTTCGTCCATTAA
TGTCTATTTGTTCTCTCATTTGGCTAACTTTCATTATCAGGTAGGTCCGA
TCATCATCCAGCTTGTTTCAGACAATGACTTTGTCAAATCCGAAAACTTT
AAGTAATCTAGACTTTGAAATTCTTAAAACAATAAATTGCATGTGAACAA
TGTTTTATTCCAAGTGCGTGCCCTTTAACTACCTCGAAATGTTTCTTCAG
TAGTAAAGAGACTAGACATCAACAAAAACCCGAAATAACCTACTGATTAC
TTGTCTAGTTATTAACACTGAATTTTTTCTCTTTGTTCATTTCTTTAGGG
TTGCAGATCATTTTTACAAAAGATGAAGTTGATTTTGTTCAGAACTTAGT
TTTCTATATCGAAATGGCTTATCGAATACCTGTAATTCTTTATTCTCGTT
TTCATTTTCAATTGTGGGTTTTAGAAGGCTACTACCATACTTTTAAGTTT
GCCATAATCCTTTTAAACCATCATAAATTACTTCTTGTGCGACAATTTTA
AGCGTTAAAACTATTTTTACATAATTAGAAATATGAAAAATCATTTTGAA
AATATTTTTTAGGATTTTGGTATATGGGAGCGAGGAGATAAGACAAACAT
GGGATTACCAGAACTCAATTCAAGTTCTATAGGAATGGCCAAGGTATCTT
TCTCTTAGACCATTGCACATAAATGTTAATTTACAAAACATCTGATTCTA
TGTTTTTTTTTGTTGCAAAATTTATGCTTAAACTGTTATGGTTTAGACAA
ACAAGGCTTGACGTCAATGTTATTCTATCTGACAGAATTTCAGACTTTAA
ACGGCGTTCTCCAAAAGATTCCCATTTTTGTAGTTTTTATAGATGCCTTA
CTTAGGAATGGCTCCAACTTTTTAATTGAAAAATTGTCATTATATTGTCC
CAAAAAGATATTTGAAAATTTTCGAAATATTTTGTAACAATTCAAAAAAG
TGACAAAAAATCAATACTGGAACATTGGGCTGTTCCATAAAATTTCCATA
CAGAGGTGTGGACGAACCTTTTCAAGTGAAAATAAATTTCTTGAAAAAGT
GTAGATACCCCCTGGAAAATAGCAAATTTTGCAAAAGAACCCTTGGAAAA
AATTATTTTTATGTCTTATAAATAGACTAGATTCTACTTCTAGCTGAACT
TTGCTTTTTGATAATTTTTGATGACGCTGAGTCCAGTGAAGTAGACTAGG
AGCGTTTGGCGAGGTCCCAATTTTGAAAAAGAATGTTTAAAATCAAAAAA
AAAAAAAACTACTTGGAGTTGTAAAGAAATGCTCAAAATTAAGAAACAAG
CATCAATAACAGATTTGCAATACCTTATTTTCAAATAAAAAATTAGCTTC
ATTCTGTTTTCTGTTTAGCTTCGAAAAACAACTAAAATCTGGCGGTCTGT
TTTACAGTCCGCCTAAGCAAAAGCATATTACCATATACTGCCGGGCCACT
TAATCGCGCCATCCAGTCTATCAAAAAGCTTTAAGTGGACCCCGGGTCCA
AAGTGATGGGAAAAATCAAAATTTAATAGCCGCATTCTTCTTCACCGTTC
AATATATGTCTTAAAGTGAGGGTGGACGAACTAAAATCAGCTGTTCACCC
CCTGTAGATTCAAAAATAACTTTTTTACCCCCTGGAAAAATGAAAAAAAC
ACTTCTTTAGACTCCTGGAAGTTCTTCTCGGATTAACCCCTGGAAATGTT
CGTTCACCTTCTCTGTATGGTCATAAAATGGAATGGCCCATTCCTATTAC
CATAACCTTTCCTATTATGTTTAACACAAACTGCTATAATTGCTAAGTCT
GATAGCAAACATGGCATTTCGTATTTTGTTAGGCTGCTTTAGAAGCAATG
GNCACAAATCAACCCTTACAGTGCACTTTCCAAAGTCCAAAAAACCTACC
CTTAAGGGCCGCACGTCCGGTAGGTCACTTACCTGGAGTGCCC

Coding sequence (CDS) from alignment at scaffold_47:510408..524400-

>TCONS_00067513 ID=TCONS_00067513|Name=TCONS_00067513|organism=Clytia hemisphaerica|type=CDS|length=1524bp|location=Sequence derived from alignment at scaffold_47:510408..524400- (Clytia hemisphaerica)
ATTCTGGTAAGACAGTGGTTGATGACACAGGATGGGGTCATTTACAAATT
GACGCCACTTCTCTCTATCTCCTAAAGTGTTGTCAAGTTGATGAGAGGCT
TATTAATGAGTATGATGCAGCAGAATCCAATTACTGGGCTCCTTCCACCA
AGTTTATTTCATGGAAAGTTCAATGAAACGACCAACAGACATTCATGGGT
CAGAGATAATGTTTACAGCATTCTAGCTGTATGGGCTTTGTCAAGGGCAT
ACAAAAAGAAGACTGATTTTGATGCAGAGAAATCCAAACAATATGAGCTA
GAGCAGATGGTTAATAGCAAACAGCGCCTCTCCCTTCATGAATATTATAT
ATTGGTGAAAAGGACCATTCTTGATTTCCAGATTCTGGTAAGACAGTGGT
TGATGACACAGGATGGGGTCATTTACAAATTGACGCCACTTCTCTCTATC
TCCTAAAGTGTTGTCAAGTTGATGAGAGGCTTATTAATGAGTATGATGCA
GCAGAATCCAATTACTGGGCTCCTTCCACCAAGTTTATTTCATGGAAAGT
TCAATGAAACGACCAACAGACATTCATGGGTCAGAGATAATGTTTACAGC
ATTCTAGCTGTATGGGCTTTGTCAAGGGCATACAAAAAGAAGACTGATTT
TGATGCAGAGAAATCCAAACAATATGAGCTAGAGCAGATGGTTAATAGCA
AACAGCGCCTCTCCCTTCATGAATATTATATATTGGTGAAAAGGACCATT
CTTGATTTCCAGATTCTGGTAAGACAGTGGTTGATGACACAGGATGGGGT
CATTTACAAATTGACGCCACTTCTCTCTATCTCCTAAAGTGTTGTCAAGT
TGATGAGAGGCTTATTAATGAGTATGATGCAGCAGAATCCAATTACTGGG
CTCCTTCCACCAAGTTTATTTCATGGAAAGTTCAATGAAACGACCAACAG
ACATTCATGGGTCAGAGATAATGTTTACAGCATTCTAGCTGTATGGGCTT
TGTCAAGGGCATACAAAAAGAAGACTGATTTTGATGCAGAGAAATCCAAA
CAATATGAGCTAGAGCAGATGGTTAATAGCAAACAGCGCCTCTCCCTTCA
TGAATATTATATATTGGTGAAAAGGACCATTCTTGATTTCCAGATTCTGG
TAAGACAGTGGTTGATGACACAGGATGGGGTCATTTACAAATTGACGCCA
CTTCTCTCTATCTCCTAAAGTGTTGTCAAGTTGATGAGAGGCTTATTAAT
GAGTATGATGCAGCAGAATCCAATTACTGGGCTCCTTCCACCAAGTTTAT
TTCATGGAAAGTTCAATGAAACGACCAACAGACATTCATGGGTCAGAGAT
AATGTTTACAGCATTCTAGCTGTATGGGCTTTGTCAAGGGCATACAAAAA
GAAGACTGATTTTGATGCAGAGAAATCCAAACAATATGAGCTAGAGCAGA
TGGTTAATAGCAAACAGCGCCTCTCCCTTCATGAATATTATATATTGGTG
AAAAGGACCATTCTTGATTTCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042155XLOC_042155Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067513-exon-scaffold_47-1575043694:524263..524400TCONS_00067513-exon-scaffold_47-1575043694:524263..524400Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1575043694:523687..523869TCONS_00067513-exon-scaffold_47-1575043694:523687..523869Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1575043694:523032..523079TCONS_00067513-exon-scaffold_47-1575043694:523032..523079Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1575043694:512462..512560TCONS_00067513-exon-scaffold_47-1575043694:512462..512560Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1575043694:511970..512052TCONS_00067513-exon-scaffold_47-1575043694:511970..512052Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1575043694:511708..511788TCONS_00067513-exon-scaffold_47-1575043694:511708..511788Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1575043694:510408..510518TCONS_00067513-exon-scaffold_47-1575043694:510408..510518Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:524263..524400TCONS_00067513-exon-scaffold_47-1510915933:524263..524400Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:523687..523869TCONS_00067513-exon-scaffold_47-1510915933:523687..523869Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:523032..523079TCONS_00067513-exon-scaffold_47-1510915933:523032..523079Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:512462..512560TCONS_00067513-exon-scaffold_47-1510915933:512462..512560Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:511970..512052TCONS_00067513-exon-scaffold_47-1510915933:511970..512052Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:511708..511788TCONS_00067513-exon-scaffold_47-1510915933:511708..511788Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1510915933:510408..510518TCONS_00067513-exon-scaffold_47-1510915933:510408..510518Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:524263..524400TCONS_00067513-exon-scaffold_47-1491911889:524263..524400Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:523687..523869TCONS_00067513-exon-scaffold_47-1491911889:523687..523869Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:523032..523079TCONS_00067513-exon-scaffold_47-1491911889:523032..523079Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:512462..512560TCONS_00067513-exon-scaffold_47-1491911889:512462..512560Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:511970..512052TCONS_00067513-exon-scaffold_47-1491911889:511970..512052Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:511708..511788TCONS_00067513-exon-scaffold_47-1491911889:511708..511788Clytia hemisphaericaexon
TCONS_00067513-exon-scaffold_47-1491911889:510408..510518TCONS_00067513-exon-scaffold_47-1491911889:510408..510518Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067513-proteinTCONS_00067513-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:510408..524400 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.4765	11.2605	5.29146	4.68903	15.8558	11.5804	15.6176	16.5132	14.2676	15.3506	12.526	12.3615	12.7978	13.0225	14.4816	16.3026	16.7707	18.295	8.51272	10.232	12.3463	13.0503	17.2141	18.9958	21.6587	20.8385	8.44332	9.22016	13.7743	16.3146
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011613Glyco_hydro_15/PHK
Blast
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BLAST of TCONS_00067513 vs. Swiss-Prot (Human)
Match: KPB2 (Phosphorylase b kinase regulatory subunit alpha, liver isoform OS=Homo sapiens GN=PHKA2 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.265e-62
Identity = 71/99 (71.72%), Postives = 85/99 (85.86%), Query Frame = 3 
Query:  354 EYDAADSGKTVVDDTGWGHLQIDATSLYLLTLAQMTTSGLQIIFTKDEVDFVQNLVFYIEMAYRIPDFGIWERGDKTNMGLPELNSSSIGMAKAALEAM 650
            +Y+ A  G TVV D  WGHLQ+DATSL+LL LAQMT SGL+IIFT DEV F+QNLVFYIE AY++ D+G+WERGDKTN G+PELN+SS+GMAKAALEA+
Sbjct:  115 KYNTATCG-TVVGDDQWGHLQVDATSLFLLFLAQMTASGLRIIFTLDEVAFIQNLVFYIEAAYKVADYGMWERGDKTNQGIPELNASSVGMAKAALEAI 212

HSP 2 Score: 104.76 bits (260), Expect = 7.265e-62
Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 1 
Query:   73 SKQRLSLHEYYILVKRTILDFQNPITGLLPPSLFHGKFNETTNRHSWVRDNVYSILAVWALSRAYKKKTDFDAEKSKQYELEQSVVKLMRGLLMSMMQQI 372
            S   + L  Y  LV++TIL +QNP+TGLL  S           + +WVRDN+YSILAVW L  AY+K  D D +K+K YELEQ+VVKLMRGLL  MM+Q+
Sbjct:    5 SNSGVRLDGYARLVQQTILCYQNPVTGLLSAS--------HEQKDAWVRDNIYSILAVWGLGMAYRKNADRDEDKAKAYELEQNVVKLMRGLLQCMMRQV 96
The following BLAST results are available for this feature:
BLAST of TCONS_00067513 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KPB27.265e-6271.72Phosphorylase b kinase regulatory subunit alpha, l... [more]
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