TCONS_00067872 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067872
Unique NameTCONS_00067872
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2037

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067872 ID=TCONS_00067872|Name=TCONS_00067872|organism=Clytia hemisphaerica|type=transcript|length=2037bp
CCTTCTATATCCCACTACACTTTACCACACTCTGCAAACTAGAATCCAGT
CCCTTAGTACACTTTGTATGATTTTGATAACGCTCTCGAAAGAGTCACGA
TTGTATCAAGTCtatttggaaaatcaaaaagtggtgcaaTAGTGGCTCTG
GGTGATTGTGTacttaaaatatatattttaaacaCTTGCTCTACTttagg
tcagatctctgatcttcaccatacatatttttttcttttagacgTTGCAG
TGAAAGGCTTGATAGCAGAAGATATCCGAGTGAAACTCCTTCAAATTGAG
AAGCAGTTTCTTGGTCAAGTCATACAAACATGTCATGGAGATATTGCGTA
TCATTTCACGCTCAATAATCAAAAGGAGGAATTCCAGGAAGGTGAGGTTA
TTGGATTTTTCGGTCAAGACAGCAAGCAAACAGTAGAAaagctgacgtca
gcaaattgCAAAGATGTCAAGCTACAAGGGGTGGTTACTCGATCGCAATA
CTTTGAAGGGATGAAACCGCGAAATGCAGATACCTCAACAGAAACAATAT
GTTTGATGGGTGTGGTTCCAGTCAAAGTGATTGGTAAAGTTCAACCACGT
GATGCTCTTTACTCGTGCCCAGACCACCCTGGTGTCGCAATCAGCCAATC
AGAGTTGAGTAATGACGATACAGAGAAATCGAAGTATGCTTTTGTCGGAA
TGGCTTTTGAAGGGAAACCTTTAAATGATACTAAAACTATTTGTTTTGTG
ATGACGATTATATCGATGAACCAATCGATAACTCAGCGAATGTTCAACGA
ACGATTGGAATCGATGAATGCACAATATCATCAACGAATCGAACACGTTA
AGAAAAGTGGGAAAAACTTCCGAAAAAGGTGTCTCTGTATCTCAATCTTG
GTGACATTGATTCTACTACTGGTCAGTATCTTCATGTGGCAGTACTTCTT
CCCTGGATCGAAATTCCGCTACTGGAAATGCAGCCTTGGTCGTGCGGAGC
CGACGGGTGATGTATCCTTCCGCTTTGTATCATTCAAAGATCTAAGTAAG
TACGTATCCGTGCATGGCATAAGATTCGAATATTTCGAACTGTTAGATAA
AATGGATCTGCAACATTACGAGCCACTTAATCTAAATGATACATCTACTA
GATATTACCTGAACATTGATCGTTGTGCGCATGGTGGTATCCGACGGACT
CCTGACACATCGCGCGGTCTGAAAGTGGTAGCGGGTCCAAATATCTTTGC
GGTAGACGGGGGTTGCAGATATGTTTATTTCTTCAACGACAATTTgggaa
aatggagaaaatatttGACGGCAGACGTTTTGAAATGCAACCACGGTGAC
TGAaacaactttggaaatataaGTATTTTCATTATCATTAACTTTTGACT
ATCGAGAGCCGCTAAAATGCCTCAACTTTCGTTTGATTTGAAGACCCTGT
AAATATAATACTATAACAGGTTTTGCATTGTTCACGCTGCGAACCTCAAC
TTCCATATACGGTATTAACAAACCTTTAGAAAACTGTGGAAAGTGCTGGg
ctatatatgtgaagaaacaAGAATTTCTGttcaactatattcactcagaa
GATTtcggtggcagagcagcatatgcattttgTCCTTATATATAATACAC
TTTCGTGATATAATGGTCAGTACGGAGTGATTCTGATGTATTAGTACATC
CCTAGAATCACTCTTCTTACCGTTACGGCTTTCCTACTAATATTAGCCAA
CTGGATCGCAAAAGTCTGTTCTAGTGAATAAAAATAGGATATCTGTGATC
GacattagcctatttcatagaaTTCGTGTTTTGagtaaattatatttttc
tacgTTACTGCATTAGTGatcaactttttattttcagtacTGTTACTCCT
TTATGAATTGAAATTAAAGGTTTTGCAAAGGCCACACTGGGCCCAGAgga
caaaagtttggaaataggGAGTGGGAGAACAACAAGATAgtatttcttac
attttttgtaTTATTAAGGCATTAGTAGAGCTCTAGG
Run BLAST on NCBI

transcript from alignment at scaffold_477:76553..89973+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067872 ID=TCONS_00067872|Name=TCONS_00067872|organism=Clytia hemisphaerica|type=transcript|length=13421bp|location=Sequence derived from alignment at scaffold_477:76553..89973+ (Clytia hemisphaerica)
CCTTCTATATCCCACTACACTTTACCACACTCTGCAAACTAGAATCCAGT
CCCTTAGTACACTTTGTATGATTTTGATAACGCTCTCGAAAGAGTCACGA
TTGTATCAAGTCtatttggaaaatcaaaaagtggtgcaaTAGTGGCTCTG
GGTGATTGTGTacttaaaatatatattttaaacaCTTGCTCTACTttagg
tcagatctctgatcttcaccatacatatttttttcttttagacgTTGCAG
TGAAAGGCTTGATAGCAGAAGATATCCGAGTGAAACTCCTTCAAATTGAG
AAGCAGTTTCTTGGTCAAGTCATACAAACATGTCATGGAGATATTGCGTA
TCATTTCACGCTCAATAATCAAAAGGTaatcttttgaattttattttttt
ggaatttcaagcCCATTCAAGgtcaaatattttcatgtctCACGTATGTT
TCATTGTTCGAGAAATTTTGTCGCAAAAATACTTTGGTCGGGTagaaaaa
tcgagaaaaacttTGTCGTTTTTGTGGGAATCATTTTTGTCACCCCATTG
AAGTTaaccagaaaaattttttatcgGGAGATAATGCTGTCTCGTCACTT
CTCTCCGGTTAATTTTTCCCCTTTAGGCAAATTTCAAGGGTTTTGAGCTG
CTaccgtttttatttcaaagattgaGTTTGAATTCAGttcgaaaaacaaa
attatcGACCCAGGCTCTGTTTAATTAGTTGCGAActattaaaacacaaa
gaatccACCTCAGAATGGGTTTTTTTGTTAATATGGGGCCTAggacatca
aatttttgtcaTGATTCTCATGGCTCATGTACAAAAATtaggattgagtt
tcaaaattcaagcaaAGATTGAGTTTCGGCCACTGTTATCTGGTAGCAGA
AAAGGCCTGGAAAGTTGCCTTCCCTTGGATGTAGTATCTGAACGGTTACA
GATAAAAACCTTTGGTCTCTTGAACTTAAataaggtgggagtcacatgaa
gttttgagatttggtgaaaaaattatcgatttcgGGATTTTGCGCGTTTT
ATGACCCTATACCCTTTCTGAACAcactctgaaaattttaaggccgtAGC
ACTTATATTTCCTGAGATATAAGCTTTTTTCTAGACCCTGATCTAAAGTA
TTCTCCTTAGcaacgaaaaatcatacccgttgctagggcccaatttcttt
atggctgatctaaacataggatcatgacataccaaacgaaagatcttttt
acgcccttttcgggcgtctaaatcaataccgcctttttttcgcgggattt
cctaatatgacgtaatcaaagatggtaaccaaagaagtgatattttaaaa
aacatacaaattttGGAGGCTGTCAGCCAGTCAGCAGTGTTTTTGACTAT
GAAAACTGCTTTAATTTGTAAAATGTTGGATTGACTGATGACATTTTAGC
TCTTTAATGTCATTCTTCTCAACTAAGAAAGCTTGAGCTAGGTGAAACCA
AAGACTTGATTCTCAAACTCAAAGTTTTCGATATGAACTTAGTTTGACGA
CACCGAAAAACTTACTGAAGGACGAAGACCAAAGGcatattcaatgatgt
atctatttaaagATCCAAGTTTCAAAGGAATTGAAAGCCTGGAGGCTGGT
TTAACAGTTGCGTGTGATGAATTATTGAAGGTCTAGGGCGCTCCCACCGC
CCCTATGGCTGGATTATTTACATCATTCACGAAGAAATCGTGCACGGCTA
GATGTCCAAGTGGATTCTTGTATCACAACAGATTAACTTTAGATTAACCT
ATAACTGACAAAATCAGTGAGGAAAATATACTAGGATGAtctattacatt
gaaaatatggtttttgttgtgaaaacacatttaaattgacttaaatcaat
gttgacgtggagtttggcgcaaaattttaaggattggcGCACATCATGTG
AAAGtgataatttggaatttctggactattttgatatttcaaagccTTTT
CTAAAGTATATAAAGTAGAACTATAGTCCATTTTAGTCAAACAgagaaag
aattttgtaaaacggtcgaTTTATTACAGAGAAATAGAGATATATATCTA
CTTTTGACTTTACGGAccgttttctcaaaataggtttcagggggttttcg
cacaccttggcaacgttttctcaggattgacaagtgctatgaacttgaaa
ttttcaggagaaatTCAATTTATGGTCTAGAGTGTTATGAATggattaca
tttttgaaaaaatacttttttgattcctaaattcaaaaaatgcatttttt
aatttccagaccccctggaatgaaatttcaaaaaaaaattccattcatAA
CACTCCTTATCCAAATATTAACaagctgcaaaaaaaatttttgtgatagg
ttttgtagatttttctaaaacgttgACACGATATTTTCACAGTAcattac
cccctggctgattttacccccgtcttggttatttttagatttttttttac
attttacaaagCATCTATTGTTAAGTTTCCTctgtagaaaatttcattta
aaaatctcttcaagttcaaaagttatacagaaaaatgtaaaaaatcaact
ttctcaatttttcatgtgactcccaccaAAACATCTAAGGAAGATTTTTA
CTCCAATCCtctaatttcttataaaaaaacaacctgTCATGCTTGTGATT
ACTCCTGTCATCCTTttcagtggcgtggtgggaaaatttctctgggggGG
GCCAAGGCAAAcatggcgccctttttaaagattttttgtttttggcgccc
ctcatttttgggcgccccttctcaaaagggctccgATGGGGGGGGCTGGC
CCcctggcccccccccccccccccccgccNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTGAAATATAC
TAGTAAGgcatttcaattgttttcaaatctttaaatgttctcataaaaag
ttTGCTAAAAATTTGCGACAAATTTTATCCAACTTCGTTATTTTTTTGTA
GGAGGAATTCCAGGAAGGTGAGGTTATTGGATTTTTCGGTCAAGACAGCA
AGCAAACAGTAGAAaagctgacgtcagcaaattgCAAAGATGTCAAGCTA
CAAGGGGTGGTTACTCGATCGCAATACTTTGAAGGGATGAAACCGCGAAA
TGCAGATAGTAAGTAGAATGAAATTTCCCTCGTTTTTAATAGGTCTCAGA
TCTTTAACATGGGATTTTAATCTCTTAGATAAGGCGAGACCGATTTGATT
AGTTGTTGACCCAAGCGACCCTAAAATTCCAAACatcgaaatgaaaataa
aatttattttgatagtacatttttattttcattgctttgcagactgccaa
attttcaaaattctagttttatttttatatttttgccgACTGACCGACCA
CGTAGCTTGGCCCAGGGTGAATAATACTTTTTTCAATCAAGTATATTTAG
CTATAGATTGCTGTGCTGTTAGGCTACGTCATACCGTCCTTCGTTTTTAG
CTTAAAACGGTCTATTGTGTTGACTCGATTGCTGTTCGATCAATTTTACC
CACGAGTAAGGGAAAATTATTATGACCAGGTTAGCTTCGAGAAGGACTTG
AGCTTTTCTAAGAAAGGTACTGTGGGTAGTTAATCTCATTTGAGATGTta
agaaattttagaaatgttGGAATAAGACTCATTTTAAAATCTGATATCGT
GCCAAATTTATGTAAAAGATGTGTGGGTGTTGCTTTTTATTGGTATTTTG
AGAAAACtgcaaatttttagattttatcttTCATTTCAAGTATTAGCCCA
CacaatttatttctttttcgtATTTTATTGACTATTGACAGAAAATCCAA
CTCCTTTTTATGGCGTAGGTTTTACACCCACATCCCTACACTTTAACTAG
AaacactttcttttgttttatacaACCCCTTCTCTTAAAACGAAacccct
aaaaatgacattcagCAAACATATTGCAGACTTTCGATGATTTTTGTTAC
TGATTTTACCGCGACGTGTTTTTAATATATTAGAAAGAAACACCCATACT
TATCGGTTTaattttaaagggataatcagatgttTTGAGATAGTTGGCCT
GCAGAAAGCTTATGTGGGCTTGAGTAAAACCTCCAAGTATGTTTGGGTAA
CTATTTTCcaacttttcaaatttctgaaaatgggttCTCACACGGTTCTT
atgttgaaattctatttttttcttaCTAGGGCTTGTAATTTAAATGTCTC
AACTTTGGAAAATctttaggcaaaaatattttgaggttttgctcaggaca
atagaaagattacacatgccaaatatctcaaaccatatgattatcccttt
aacctTGGTATTGCTACGACATCTTGGTTTTATCTAAACTGAATTCCATG
ACAAAAACAATAagtatttgaatatattttcgcgaGGAGGTCTATTGCTT
AGTCCCTTTAAAAACTTGACATATAATAGAAAAATACTCAATGGCTATCG
CCAAAAGAATTGCGAGTAGGAAATTTCAGAGAGACCAATTGGATCAACTG
ATCTTTCCAATTAAGGTGTTTTTTTCCCCAGAACTGAGGAGATGAAGTAA
CCTCTCTAACACATTTCCAATCCGCTCAGAGTTTTCTTTTCAGTGATCTA
GCTtagaggttttatttttacacaagtgttcccgtttcatatcagacaca
tatttcatgtcgggacagtgtctgcctattgttatattatgctgaaataa
gcaaaacaatgtttttcttttcctctctctggccaatcttgctccacatc
cgtgtcaatctaacgtgaaaaagcttgcgaattgaaattgatgagtaagc
aaacgatatcactcttatttaaaaacaaaacctttaacggAAGTAAGGAT
CTTTTGAATTCATGAAAACCTATCAATATTTATCTTACATACAGCCTCAA
CAGAAACAATATGTTTGATGGGTGTGGTTCCAGTCAAAGTGATTGGTAAA
GTTCAACCACGTGATGCTCTTTACTCGTGCCCAGACCACCCTGGTGTCGC
AATCAGCCAATCAGAGTTGAGTAAAGACGATACAGAGAAATCGAAGTATG
CTTTTGTCGGAATGGCTTTTGAAGGGAAACCTTTAAATGATTCTAAAACN
Tccaaactaagctaacaataaattaataaatcaattgataaatgcatgga
aaagaaaaaaaaaacttactacagaggataaatactaacaaaaaataaaa
gagaataaaaacaaaaagagcttggagagcagttagagtaaaagactaaa
ataacggtcccccaaaacggcttgtatcacagataaattttattgttata
cTCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGAAAACCTATCAATATTTATCTTACATAC
AGCCTCAACAGAAACAATATGTTTGATGGGTGTGGTTCCAGTCAAAGTGA
TTGGTAAAGTTCAACCACGTGATGCTCTTTACTCGTGCCCAGACCACCCT
GGTGTCGCAATCAGCCAATCAGAGTTGAGTAATGACGATACAGAGAAATC
GAAGTATGCTTTTGTCGGAATGGCTTTTGAAGGGAAACCTTTAAATGATA
CTAAAACTGTAAGTCATTTTGAATATTGGAATTTTTGGAGATGTAAACTT
CGATCAGAGAGTATTTGTACTTTCGGACCAATATTGGGCTTAAAATTAGG
CTTTTAAAGAAATACTGTATGTATGTACGTTTGACCTTACAGTCCATTTT
GGTATTAAATCTTGGAGGAAAAAAGCTCCCAAACAACCGAAGGCAATTCC
CTCAATAACGCAGATACATAATATTACAAATTACAAATAATTTTCTACCT
TGAATAATTATGGGCGACAACCCTTTGCTGTCTTGGATGAGTGATCATGG
TTAGCCGATCGGCTATCTTAACTATGACGGCAACCTTTTAGGAACAAATG
TTCCTGACTCAATACAATGCCttagattttagaaaaaacctTTTTACCTT
AGATTTGTTTTGTGATGACGATTATATCGATGAACCAATCGATAACTCAG
CGAATGTTCAACGAACGATTGGAATCGATGAATGCACAATATCATCAACG
AATCGAACACGTTAAGAAAAGTGGGAAAAACTTCCGAAAAAGTAAGTTTA
TGGTTTCCAAATACTTTTTATTCTAAACTAGAAAAAGCTCGCAAAACTTT
ACTTTGACCTTCACTGGGATCCTATAAATATGTAGAATTAATTATAGTTA
GAAGGTGTAATGATTCGCCGAacattttcttgtttgcctACATTGAACGC
TTGACCTAGAGCTAGTTCCAGTCTTTTTAGGTAAATTCCCCGTGTGTGAG
TCAGAAGTTTAAAGGAATGTTAAGAgtgtttttttgtggtttttggTTTT
GCATCCTAGAACTATTTGCGTGATTGTGGATTTCATAACAATTCATAATA
CCCTCACTACACATATTTTAAAACAATTATCTGAATAACAACATTTATAT
AATTTCTTGGAAATATAAAGATAAAGTGCGCTCTCTCGCTAGTTCGAACT
ACTATTTTTCGATTATTCGAGTTTTTCTACAATTCGAACTAATTTCCAGT
CTCCCATCAAAAAGAAACCTTCATAGGTtgctttctctaattcgaatctc
tctgttgTTCGCGAACAAATTAGATTATTCCTTGTTCgagtttgaattag
agagagtcaactgtgaAGGTGGATTACGAGCCTCAAGGATATGTCATGCA
ATGAAAATTATGCTGTTCTATTAATTTATATACAATACAACGTTCTGCCT
TCAGAACTCTGATCTATTtttgaaaacctttaaaaacaGTTTCTAAGAAT
AAGAAAAAACCATACCGAGAACTCAATGGCAAACGTGAGACTAATGATTT
CTATAAAGATATTTGCAACCTTGACGGAGAGTGTTTTTATTGATCATATT
CTTTTTATGGGAATCGGCACTTCTCCTTTCTCTCTTTTTTGGACTTCTTG
AGGTTACTAATGCGAATGGTTTTTCATGgtatgttttcaaattttgacat
tggCATTGGGAAATTTTTATCTGAACGATTTTAGTCGGAAAGGACTCTTT
AGGTTTTCCTTTTTATAATTACATCTTAAATATATGCAATCTAAGTCGTC
CCTTACATATATAATAGAATAATACAGGGTAATCTTGTTTTCATAAACAT
GTCAGGTTTGATTTTAATAATCCGTTATGTTTTTAAGCTGTAATAAAGCC
TGACCTTTTATGCTTTTAAGATTCTATTTTGACTTGAAATCCTATGTAAG
GGCTTAAGTTGATCAATTTAATTCTCTTGGCTAAATCATGAACATATCAG
ATGACTTTTTTTGCTGACAAATATGATTTTCGACCTTTTTTGTTTATact
tggaccgacttggagttAGCTTTAAATTCATAGTCCAGCCAGTACAAGCG
TATTTAGacttatttcactttttgacaTGGAGAGAAGAAGCTTTTAGTAG
AAATTACTTGCATCCGTCCATATGTtttaatgaaataatttttgctaaaa
cagaacttttgattgcTTTCTCGATATCAAAAATCGAAAGAATACACGTT
CTTTATAAGAGCTATCAAATTATTTATTCGTGATTTtacaggcttaaatg
ttctggatatttttttaatatgcTTACTTTATAAATTAAAGTTATAATCT
AATGGTtaaactttttctaaatttgtcATGTCACGAGATGCGAGGTTGAT
TTCTCCGAAAATGTTCCAAGCGCTGTACCTCATCGGAAAATTTCTgcgaa
aaatcgatttttggtCTTGAAAAGGTCATTTCTTGGCATCGGAAGGTGGA
AACTTGACAGATAACTTCCTTTCCTTGATCTACTTTTCGCACTGAATGCA
TTGGTAGCATCAAATGTTTAATTTCagcgtttttgaaaaaaatcgctTGC
AAAGGATCCTTGATAAATCCTGACGGTCTATCGATTTACttgaaaaatac
agaaaaagCCGAGAGGCAAATTGTAGGTGTAGCACCTTGTTAGTTGCAAA
AACTTGTCCAGATCTAAGGAATGGCCCtacaaaaacctgttttaaggtcT
CTTGCCTAGTAGGGTTCTTTTGTGACATTTTCTGactttaaaattatata
aattataCTTCTCCCATTTCTTTGCAAGCCTGATAGCCTTTTTGTGGATA
TTCATTCTAGATAATGTGTGATTTGtccttttgttttgtgggttttgttC
TCTGTGTTTCCATTCGGATAGTTGAAGGTTTCGTATTTCTAGACTATTAT
ATATATCCTTTCATAGGGTGTCTCTGTATCTCAATCTTGGTGACATTGAT
TCTACTACTGGTCAGTATCTTCATGTGGCAGTACTTCTTCCCTGGATCGA
AATTCCGCTACTGGAAATGCAGCCTTGGTCGTGCGGAGCCGACGGGTGAT
GTATCCTTCCGCTTTGTATCATTCAAAGATCTAAGTAAGGTAAAGTTAAA
GCTCGAATCAATAGAGACTCACATATTTTTGTAATATTGGTCAGGGCTGG
TGTTGCCTTAGCATTCTGGCTcattttctggaaaatttgCATCGACTacc
ctagcctgggaatccatgctatgatttcttctttgataaactgatggcga
aatgtatagcatggtacgggctgagagtttgaatttctcagatcctaata
acggttggaaacatagccaatcaaattttgttattcttttactggtcgca
ctttcttagagaaagcacaactttcgaaatttggtttttattttagtaag
tgaggatagcgctaaattcgaatttcccactgtaaaaaatgtgagtccaa
tattggactcacagctcgaacccgtcttatgtacatcaaattataaaaaa
acacacgacgggtctcctgtctacgaCTACCCCTGATTTTATACTATATT
TATATTAGGTCAAGAGCTATCGTTTGTCATGGTTAGATAATCTAAAATCC
TTGTACTTCACGAGATAGTGAAAACAACTAGTCTAGTTTCAGGGCTCGAG
CCTTTTTAACTTGGCAAGTGTACACCCTCTAAAATATAGTGGATGAAACC
CTTCCCTCCAGAAAACCCTTTTAAATCAGCTTTCTATATAAGATCTACAG
GGTTGACTGGCTAATTTCCTAGCTGCTCTTACTCAAATTTCTTATGGAGC
ACGGTGAAATTTTGGGAGAAATGTTGTAACTGACAATGCCTGGGTGGCGA
AGATTTTTGCAAGATTTTCACTATAATTTCCATTTTTGCACCTAGATTAA
AAGGTTTTGGGAAATTTCTGATCTGAAAACTTAAccttcctaattttttg
agtatGGAGTTTGGATATCCTGGAGTTTATTTAATGATGCTGTAAACGAA
ATTATGGTTTTGTGGTTAAACCACAATTTTGAAGGTACTATTCCTGTATG
AACAATTTTCTCATAAAGTGAACTTAACAGAATCACTTGACGTAATGTCa
tagaaacattcgaaattatctgattaggcgagaccaatttgattagttgt
tttttaCGGGCCcaaccgaccctgaaattccaaaaattgaaataaaaata
aaattgattttggtagtaaACTCGGGTccaaattttggtagtttttccaa
ggttttgagaattttatgttcaatttttcatctccTTTTGGAAAACAATT
GGTTATGTGGTTAGTAAATATGacattaaacttttttttgaatttaataa
tTAGCAGTTTTTAGTACTCTCGGTTTTAGCACCATACTGCTAAAAgtacc
aaaattcaaattgcTGAGAATAGGGACTTTACAGTGATGTGATAGTTAGT
GGTACCTTGATAATTATATTTTGCTTAAAATTGCAGTCGGAAAATTGTAG
CGATATCAATGCTGATATCCTGATTTTGGATCCAAAAATCCGTCATCCGC
CAATAATGAAATTCGTTGCCAAACTTAGCTTTTTCCTtgatctgccaaat
taaatttccttcCCTTTAGGTACTTAACAAGAAATATTCAGAAGCCCTTT
TATGCATGAtgttattttttgcacaaaaagattttttgcacaaaaagagc
cataacttttgaaacatcaatttagaaaatttttccgaaaaatttcagat
agttcaatcttttgcagacaatttaaaaaaaaatcgaaacaaaaaagtta
attacccattaaaacttagcactttttgtaaaagagggtaatataacatt
ttattaacgtctttttaaggttcataacgtcatttttaaattgctaatta
ctcttgataaaataaattcagaaacaacttataaagacaatttttcgtta
aaagtgttaaggaactcaaaacaaaagttttatctctAAATCTGCGTAAC
CGATCTTTTGACTatagtcagagcccttaaatgatAATTTTCGTATGGTT
TTCTCGAGTACTTCTTGTTTCATAAGATAAacatattttcatttcaaata
gcACATTAGGATAAAATTATCTGGGTTTTAtaatgatatgaaatttaaaa
tttattacatTCTATATTTCAGTACGTATCCGTGCATGGCATAAGATTCG
AATATTTCGAACTGTTAGATAAAATGGATCTGCAACATTACGAGCCACTT
AATCTAAATGATACATGTAAGTGTAAATTTATATATTTGTACATCCCATG
GCTGGGTAGCTAAGtgggtagagcattcgccttacaatccgagggttgtg
ggttcgatccccggtcaccacAAACTCAGTGAAAGAGTAAAGCTTAAATT
GGGTGATATGATCTAGGTGATAATGAGAGTAGGTTTGgcactccacctca
gcattcgatttCACTTTACAACGGAAAATCATCAACACTCTGGGTAGATA
CAAAAGCAGCTTCAACTTATTAGGCGGTCAGTGTCAGGGCCGTTTTGACt
acaaaaatgttatttttgttggTGAGCACGTGGAAAGCAGTGAGAAGATC
CCGGGAATGCGCCAAGAATACTTCCCCGGGAACGAGAAGGTTTAGCCTTG
ATCATCATGTGGCAATCTcataaaaattccttttgaaatTCGATTTCGGT
TCCTTAAACTGCTAAGTCACGCATAGAATAGAATGGGCTCATGCTTTTAA
GCATGTCTGACTGGAGACTGACTATTTTNCCTTAAACTGCTAAGTCACGC
ATACAATAGAATGGGCTCATGCTTTTAAGCATGTCTGACTGGAGACTGAC
TATTTTCTTAAAgttgtttttgacattttcatcaaaacaaccCACGGTTC
TGACCGGAGAAGTCGAGGTCGCTGAATATGCTGATATACCGTCTTCcaca
gtcagtcaggatgtgGGAAGGTCATAAGCTAGCTATCTCTGTCGCAGCAA
TACATGAATCTGCTTTTGTCTGCACAGTGGaatctccataacttgaacac
gCTCATGTgaacaaaattttcttcgagtttCAGAGAACTTTTTGATCAGA
TTTCCCAAAGAAATTGTGTTTGAGTTTGGAGAATTTACATAATAATACAC
AATTATATTTACAAACGCTTTCTTCCAGCTACTAGATATTACCTGAACAT
TGATCGTTGTGCGCATGGTGGTATCCGACGGACTCCTGACACATCGCGCG
GTCTGAAAGTGGTAGCGGGTCCAAATATCTTTGCGGTAGACGGGGGTTGC
AGATATGTTTATTTCTTCAACGACAATTTgggaaaatggagaaaatattt
GACGGCAGACGTTTTGAAATGCAACCACGGTGACTGAaacaactttggaa
atataaGTATTTTCATTATCATTAACTTTTGACTATCGAGAGCCGCTAAA
ATGCCTCAACTTTCGTTTGATTTGAAGACCCTGTAAATATAATACTATAA
CAGGTTTTGCATTGTTCACGCTGCGAACCTCAACTTCCATATACGGTATT
AACAAACCTTTAGAAAACTGTGGAAAGTGCTGGgctatatatgtgaagaa
acaAGAATTTCTGttcaactatattcactcagaaGATTtcggtggcagag
cagcatatgcattttgTCCTTATATATAATACACTTTCGTGATATAATGG
TCAGTACGGAGTGATTCTGATGTATTAGTACATCCCTAGAATCACTCTTC
TTACCGTTACGGCTTTCCTACTAATATTAGCCAACTGGATCGCAAAAGTC
TGTTCTAGTGAATAAAAATAGGATATCTGTGATCGacattagcctatttc
atagaaTTCGTGTTTTGagtaaattatatttttctacgTTACTGCATTAG
TGatcaactttttattttcagtacTGTTACTCCTTTATGAATTGAAATTA
AAGGTTTTGCAAAGGCCACACTGGGCCCAGAggacaaaagtttggaaata
ggGAGTGGGAGAACAACAAGATAgtatttcttacattttttgtaTTATTA
AGGCATTAGTAGAGCTCTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042391XLOC_042391Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067872-exon-scaffold_477-1491911889:76553..76927TCONS_00067872-exon-scaffold_477-1491911889:76553..76927Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:76553..76927TCONS_00067872-exon-scaffold_477-1510915933:76553..76927Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:76553..76927TCONS_00067872-exon-scaffold_477-1575043694:76553..76927Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1491911889:80104..80260TCONS_00067872-exon-scaffold_477-1491911889:80104..80260Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:80104..80260TCONS_00067872-exon-scaffold_477-1510915933:80104..80260Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:80104..80260TCONS_00067872-exon-scaffold_477-1575043694:80104..80260Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1491911889:82905..83110TCONS_00067872-exon-scaffold_477-1491911889:82905..83110Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:82905..83110TCONS_00067872-exon-scaffold_477-1510915933:82905..83110Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:82905..83110TCONS_00067872-exon-scaffold_477-1575043694:82905..83110Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1491911889:83505..83643TCONS_00067872-exon-scaffold_477-1491911889:83505..83643Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:83505..83643TCONS_00067872-exon-scaffold_477-1510915933:83505..83643Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:83505..83643TCONS_00067872-exon-scaffold_477-1575043694:83505..83643Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1491911889:85819..85991TCONS_00067872-exon-scaffold_477-1491911889:85819..85991Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:85819..85991TCONS_00067872-exon-scaffold_477-1510915933:85819..85991Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:85819..85991TCONS_00067872-exon-scaffold_477-1575043694:85819..85991Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1491911889:88075..88168TCONS_00067872-exon-scaffold_477-1491911889:88075..88168Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:88075..88168TCONS_00067872-exon-scaffold_477-1510915933:88075..88168Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:88075..88168TCONS_00067872-exon-scaffold_477-1575043694:88075..88168Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1491911889:89081..89973TCONS_00067872-exon-scaffold_477-1491911889:89081..89973Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1510915933:89081..89973TCONS_00067872-exon-scaffold_477-1510915933:89081..89973Clytia hemisphaericaexon
TCONS_00067872-exon-scaffold_477-1575043694:89081..89973TCONS_00067872-exon-scaffold_477-1575043694:89081..89973Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:76553..89973 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.422098	0	0	0	0	0	0.554407	0.684045	0.426096	0	0.507956	0.67619	0.51388	0.258597	0.179046	0	2.16453	0.421459	1.39359	1.3805	0.188108	0.330668	0.0584966	0.357604
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067872 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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