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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068463 ID=TCONS_00068463|Name=TCONS_00068463|organism=Clytia hemisphaerica|type=transcript|length=1294bp
TTCGGGTCGAATCAAAGAATGCTCTTTTGGTCTTAGGAATGATGGCTTTC
ATGGACaatcgaaaaatcaataaaaaaacattcagtTATTTTGATAAAGT
TGATGAATTTGAATTAAATGAAATCATCTCACTGCTTGGTCAATATTCAT
TGGTCAACGAGCGGAACGAATGTTTAGAAATTCACAGTCTTGTGCAAAAA
GTTATCCGATATCGTATTGAACAGAAACAATTTGTTGAGGATGAATGTCC
GTTGACACTTCTTGAAGATGTTCTTTTGAAAATCGAGGTTTCTATTAAAG
ATTTGGTTGCAAATGATGACTACGAGGATTTATGGTACATTCATGTTTTT
TGTTTGATCATGAGTGGTGCACTTAAAACTATCAACTTTGATGTTACCCG
GGTGTTAAATATCGCCACAGGCAGAATGGAGATGGAGAACTTATACCAAA
TTTCTGAACTTCTTTCAAAAGTGTTGTTAAAACAATATAGGTTGTTTCGA
GATGTGAAAACTTTTGATATGCTGTTGCATTGTCATCAACATTTCATAAA
CGCGTCAAGGCAGTTAGGTTTACTTAATTTGAATGagatttttgcttttg
aagAAGAGTTTTCCACAGAACTTGAAGAACATTCTTTAGAAGTTTACCAG
TGGAAGTTAAAGCAAGCTGATGTATATAATATACATGGAAGAGCGTTGTT
ATGCAATAATATCGTTCGAAATTTATTCAATGAACTGGTCAAGAAGAAAG
GATTTGATGATATTAAATTAAGATTGGCGAGTTTTTTTACTGTAAGTGAT
GTTGAAGCTTTGTTGAATTCCGTTGACACAAATAATCTCAGTGACACGGA
CTTTCTGATATATTATCATGCAAAATGTTCTTTATACATCAAGAACGGTT
GCTTTGATTTGGCTGAACAAGTCATGAAGAATTGGAAAGAACACTTacac
agaaaatgtttttctcgattATGGCActttaatttcacaaaaaagaatTG
CTTTTTACTTTACAAGAAAGGAAATTACAACGAAGCACTACTAGCTTGCG
ATGAACTTAAACGAGATTTTCTTATTAATGCAGATGTTTTAATTTCGGAA
GCATTGATTTTGATCAAATTGGGAAAGTTTAACGAAGCAGAAGTGCTACT
TGATGACTTTAACCAACGCAATAATGTAATTATCATTGAAATCAGCTCAT
ACCTGAAGTTTCGAAAGCACGACTTTGAGGCAGTAGAAAATCTCCTCACT
GATTGGGAAGATGAGCGTCagtcaaatcttttgtttttggtAAA Run BLAST on NCBI transcript from alignment at scaffold_485:91438..92731+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068463 ID=TCONS_00068463|Name=TCONS_00068463|organism=Clytia hemisphaerica|type=transcript|length=1294bp|location=Sequence derived from alignment at scaffold_485:91438..92731+ (Clytia hemisphaerica)
TTCGGGTCGAATCAAAGAATGCTCTTTTGGTCTTAGGAATGATGGCTTTC
ATGGACaatcgaaaaatcaataaaaaaacattcagtTATTTTGATAAAGT
TGATGAATTTGAATTAAATGAAATCATCTCACTGCTTGGTCAATATTCAT
TGGTCAACGAGCGGAACGAATGTTTAGAAATTCACAGTCTTGTGCAAAAA
GTTATCCGATATCGTATTGAACAGAAACAATTTGTTGAGGATGAATGTCC
GTTGACACTTCTTGAAGATGTTCTTTTGAAAATCGAGGTTTCTATTAAAG
ATTTGGTTGCAAATGATGACTACGAGGATTTATGGTACATTCATGTTTTT
TGTTTGATCATGAGTGGTGCACTTAAAACTATCAACTTTGATGTTACCCG
GGTGTTAAATATCGCCACAGGCAGAATGGAGATGGAGAACTTATACCAAA
TTTCTGAACTTCTTTCAAAAGTGTTGTTAAAACAATATAGGTTGTTTCGA
GATGTGAAAACTTTTGATATGCTGTTGCATTGTCATCAACATTTCATAAA
CGCGTCAAGGCAGTTAGGTTTACTTAATTTGAATGagatttttgcttttg
aagAAGAGTTTTCCACAGAACTTGAAGAACATTCTTTAGAAGTTTACCAG
TGGAAGTTAAAGCAAGCTGATGTATATAATATACATGGAAGAGCGTTGTT
ATGCAATAATATCGTTCGAAATTTATTCAATGAACTGGTCAAGAAGAAAG
GATTTGATGATATTAAATTAAGATTGGCGAGTTTTTTTACTGTAAGTGAT
GTTGAAGCTTTGTTGAATTCCGTTGACACAAATAATCTCAGTGACACGGA
CTTTCTGATATATTATCATGCAAAATGTTCTTTATACATCAAGAACGGTT
GCTTTGATTTGGCTGAACAAGTCATGAAGAATTGGAAAGAACACTTacac
agaaaatgtttttctcgattATGGCActttaatttcacaaaaaagaatTG
CTTTTTACTTTACAAGAAAGGAAATTACAACGAAGCACTACTAGCTTGCG
ATGAACTTAAACGAGATTTTCTTATTAATGCAGATGTTTTAATTTCGGAA
GCATTGATTTTGATCAAATTGGGAAAGTTTAACGAAGCAGAAGTGCTACT
TGATGACTTTAACCAACGCAATAATGTAATTATCATTGAAATCAGCTCAT
ACCTGAAGTTTCGAAAGCACGACTTTGAGGCAGTAGAAAATCTCCTCACT
GATTGGGAAGATGAGCGTCagtcaaatcttttgtttttggtAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068463-exon-scaffold_485-1491911889:91438..92731 | TCONS_00068463-exon-scaffold_485-1491911889:91438..92731 | Clytia hemisphaerica | exon |
| TCONS_00068463-exon-scaffold_485-1510915933:91438..92731 | TCONS_00068463-exon-scaffold_485-1510915933:91438..92731 | Clytia hemisphaerica | exon |
| TCONS_00068463-exon-scaffold_485-1575043694:91438..92731 | TCONS_00068463-exon-scaffold_485-1575043694:91438..92731 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:91438..92731 + |
Blast
The following BLAST results are available for this feature:
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