TCONS_00068551 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068551
Unique NameTCONS_00068551
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3265

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068551 ID=TCONS_00068551|Name=TCONS_00068551|organism=Clytia hemisphaerica|type=transcript|length=3265bp
GTTTTAgataaaagaatgaaaaagctTATCACTTAATAGTATATGAAGAA
TTGTGGATATGGGAGACAATCTGAATGGGCtgagaaaatatttggaaaaa
tatGCAACACTTGCTGAAAATAGAACACGCAACATTGATATTGTAGGAAA
CGAATTTCAGGAAATTCGGAATATAGCGGCTGACTTGAAGAAACTTCTTC
CAGCCAATGAAGGAGCAAAGGATGTGAATCGCAAAAAGAATCGCTACAAA
GACATTATACCATATGACGTTAGCAGAGTTAAAGTTGAAGTCACCTCGTT
TGAAGATGGAGCAGACTACATCAACGCCAACATTATcaagGATCATGTGA
AGAAGGTTTGCTACATTGCATCACAGGGCCCAATGCCTCAAACTGTTGTC
GAATTCTGGAGAATGATCTGGGGTTATCAAGTCAAGCTGATCATCATGGC
TTGTAGAGAAATCGAGATGGGAAAGGCACGATGTCAGAGGTATTGGCCTT
CGAAATCTGAAGAAGTGTACGGAGATGTTTCGGTTACTTTGCTCAAAGAA
ACTTCAGTGGCCAAAAACGTGATCCTCCGTGAATTATGCGCAACGAGGAA
AGGGACAAAGAGGAAACTATATCAGCTCCACTACATGGATTGGCCAGATC
ATGGAGCTCCAGAAACATTTGAAGTGATCTTACATCTGCTGAAAATTGCA
CGCAAAATTCAACCGAATGATGAAAATCCTTTACTGGTTCACTGCAGtgC
TGGCTGCGGGCGAACAGGAGCAATCATCGCCATTGATTATGCAAGGAAAT
TGATCGAAGCCAGGgcgAATAATATAAGTATATTTGATATAGTGAAACAT
TTGCGACAACAAAGACCTTCTATGGTACAAACTAAGGAGCAATATGAATT
TATCTATGAAGTGGTCAGAGAATTGGTTTTGAAAGAATTGAAAGCATGTG
ACGAAGAGTTTGAAAATTGCAGTCCTGATGCCACTTACGAAAACATTCAG
TTCATTTTGAAGGAAAAGAATTACAATCGCTCAAAATCGGCCGAGAAAAC
AATAGAAGATTCTAACAGTCACATTTCACGTTCCAAATCAGCGGAGGATG
TGTGCAGCAAGCCTTCAACTCCGTCACAACAAAGAAGACAAATTGTTCTT
CCAACTGAACACGCTATTAACACTGGAGGAAGCTTCAGAAGGAGTCGAAG
TCAAAATAGAAGGTCTCCAAACGTCCCTTCTGCTGCTGGTTCGAGACCAC
CGCTTCCGAGGAAAGGGTCAGAATCAACGGACAAAGCATACAGTCCAAAG
AAGAAGGATACTGAAGGAGCCATCCAACTTCGATCTCAATTTGAATACGA
AAACATCCACCCTCCACCCACCGCCGCCCATTCGAAGCCACGCTCTACGA
GTAGCGAACCAATGAGTCCGTTTGCTGATGAAGAATATATCCCGGTGGCC
AAACCAGTCGGTCTGACGTCATACCCGATCAAAACAGCCATGCTGAATGT
GAGTGCGATCGAGCATCAACATCGCCCCATCAAGCAAACACGAAGTCATG
AACGTATCCCACAATCCTCCATTCCTCCCTCCACAATCTCAAACATCAAT
CAAGAACGAATGAAGAAATCCTCCTCGGCAAACGATATTTGTAACGATCT
TAAAGAGAGCCGGGGTGGAGGAGGGAAACAGAAGGACAGCAAGGCCTCCC
CCATAGATGCTTTATACACACCGGTCGAAAAGTCGAAGAAAATAGCACCA
CCATCAACCAATCCACCGAACGAAGATTCGCTATACACACAAGTAGACAA
ATTGAAGAAACCAGCGCCCTATCATTCCTCACACGATAAAGTGATACACA
AACCAGCGGCGCCCATGATTTTGGGCAGTGCGGTGGAGCGGAACCGAAGC
AGCGTCAAAAAGACAATCATGCAAGACAAAGCATCCGAAATAAAGAAAGC
TGACAAATGGCAGATATCAGTGGAAAGTTCAACGACCTCTACATCACCAA
CGGGCGGTGACGCCCCTCCACTACCTGAAAGAACGCCCGAATCTTTCATC
ATAATCGATGACAAAGCTGATACTCAACGAAACCAACAACCACTCATCAA
GTCATCAGTTTTGAATTCCTCCAGTGCGAAACCTGGCTCCAAGGGTGGAA
GAGATGTATCACCAGAGGAATATACTCCCGTCGCTTCATTACAGAGCTCT
ACGTCACAACCAACTCCTCAAGAAAACAAACCGTCCTCGTGGAACCCTTT
ATCGAAAATGATGAACAAAAATAAAACGAATGACGAAAGAAATAGTCCAG
CAGAAACAAAGAAATCGAACTCTCTCCCTCCATTGAGCAGTCTTGGTTTT
GGCAAACGCTTAAAGAAGAAGCCGCAAGGACCGAGGGAAATGCCGTTACA
TTTTCATTGAAGAAAGATCTTCGGGTTTgtaatgaaatttaaATAAAGAA
AAAACTGGAgttttcaatttcatcaaaagcGATTGTTTGACCTTGGTCTA
ATCAATTGAAGAGTCAATGGATACCAACGAAAAAAACCCATCTGATTGGA
GGATCGACAGTGAGGTCGACTATTGGTAGATTGTCCCTGATTTCAAAACT
TGGATACACAAATTACTTCGAATTgacgccccgggcgtttattaCATTCT
TTGGTTTTTAGGAAGGGCGTTTGCTCAGCCAGAGTTGATACAAAGGTTGA
TCTCGGTGGAAGATAAGCAGTCAATTTTGGTGCTTTTGGTTGAAATGTTG
GAAAGATTGTCTATCCATTTTTTGTTGGAAATTCAAAGAGGCCTTCGTTT
CCTCGCTGGTACCTCGCAAGTAAACGATTTGATAACGTGTTAATAATATG
AAGAAAATGTTGTTGCAGTTCAATGTTTTGAAATGGTAAATAGTAGTAGT
AAGTAGATATCTAGAtatcttttttgaattctatttagTTTACAATAATT
ATTAGTACAAACTAATTTTTGGAGAAGCGGTCTGATTTTTCGTTCGATCC
TTGCAACAATGCAATGGATCAAGGCCCCACAAAGCGCCACTTTCTTGAAA
GAggatcgttttattttgaaaccaGTAGACATTTTTCACTATTTACTTTA
ATATTGGAGATAAAATAGAgagatttttgtaaattttttataaagtaaTT
ATTTTCTATATACGATAATTATAACGCTTTCAACTCATTTTGTAATTGCA
GTTTTTCCATACAATATAAAACAATGACGCATCTCTTCCCTCCTTTGGGT
AAGCTTTCGGTTCGT
Run BLAST on NCBI

transcript from alignment at scaffold_485:572311..583938-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068551 ID=TCONS_00068551|Name=TCONS_00068551|organism=Clytia hemisphaerica|type=transcript|length=11628bp|location=Sequence derived from alignment at scaffold_485:572311..583938- (Clytia hemisphaerica)
GTTTTAGATAAAAGAATGAAAAAGCTTATCACTTAATAGTATATGAAGAA
TTGTGGATATGGGAGACAATCTGAATGGGCTGAGAAAATATTTGGAAAAA
TATGCAACACTTGCTGAAAATAGAACACGCAACATTGATATTGTAGGAAA
CGAATTTCAGGTATTCTGCAATTTTTATTTATTTACATTGATGTTATTAT
TTCTTGTTATTCCATGAAAATTTATATTTTGCAGTTTCAGTGTACAAGGA
AAAAAACAAAATGTGAATTATAGTACTTCAAGTTTCATCTTTATCGAATC
GTCAGCTATTTTGCAGTTTCTCTATTATTTCAAACAGGTGTACCTTCAGC
TTTTAATTCTCTTACATTCTCTTAATTTCAGCGGAACTGATTTGTTTTCT
TTTAAAAACGTCAAGAAATTAGAACCTATGAAGTACAAATTGTTATAAAC
ATTTATTCAATTCCCTCAGAATTTCTTTACTGATTTAAAATCAATTCTAG
CAAGATACTGTAAGTTTGAAAATATCAAGAATGATGAATAAAGAATCTAT
AAAGAATAATTTATCATTTCACACAGACTCTGAGTCAACTTTGTCAATTT
TGTTTCAACCAGATTTTTCATCATGTTAATTTTTTGTTTTCTTGAATCAA
AACAAATCGTCTACATTTTCAGGAAATTCGGAATATAGCGGCTGACTTGA
AGAAACTTCTTCCAGCCAATGAAGGAGCAAAGGATGTGAATCGCAAAAAG
AATCGCTACAAAGACATTATACCATGTAATTAACAAGTATTAAAATTCAA
CAACTATTTGTAACAATGTTAACTGTGAGATGTTGTAACTAACTAAACCT
CGTCAATTTGAAACTTCTCAATGTTCCTTGTTTATATTGTACCCTCTTCA
TAATAATTTAATATAAAAATGAATGAAAATTATTTATTCTAACTGTATTA
TTCTAGATGACGTTAGCAGAGTTAAAGTTGAAGTCACCTCGTTTGAAGAT
GGAGCAGACTACATCAACGCCAACATTATCAAGGTTTTTCTTTTTCTTTT
TACTTTATTTGTTTGTTTTATGAGGATCTTTTGTCATTCATGCTTTTTTC
TCAATGAAAGCCTCTAATTCCGCTCCCTCTAACCTCCCAAATGGCAAATA
TTTATAAGATTCAATATCTTACCACTTTAGCTATTTGCACGTACTCGAGC
AGGTAAATTACAAGAAATATTATTATTCATTTGCTTGAAATTGATGTAGT
TGTTATTTTGAGACACTGAAGGGCATAAAAACCTTTGACACTTTTACTTG
AACTTATTTGAACTGTTAATGATGAAAAGTCATAAAAAAATTAATTTTTA
CTTTTACCATAACATTTCTCATTATGTCATTAGGATCATGTGAAGAAGGT
TTGCTACATTGCATCACAGGGCCCAATGCCTCAAACTGTTGTCGAATTCT
GGAGAATGATCTGGGGTTATCAAGTCAAGGTACTGTATGTCAGAATGAAC
ACTTTTTTTACATGGCATGAATGAATGCAAATTAAAACAGCAGTAACCGT
GTGAAAGATGTTGTGTTGCCATTTTTGCAAACAACAATTTTCAGACCTTG
CCATTCCATAGAGACATTGCAACGAGGGTTGTCCTACCACCACAACATTG
CACAAAATATCCACTTATCCATAATAAAAGTGCCTGCATAAAAATAAAAA
GATAGCCTAAAATAAAAACAAAAAACTCTTTTAAAATAACTAGCTTTGTA
GCACATCATTACGAAATATGCTTTAAAAAGTCCAACCCCTCCTTTGAAAG
CTACCCATTCTCATTACTCTACTCCACTCTTTATATAGCCTCTTTTCCCC
TCTCTTAAGTGTTTTTCGGGAGGTTTTTTTACGAAAATATTTTTCTACAG
AATTTCTTTTTCTTATCTACCATTAATTAGGTTTTTATTCAACAATATCG
CTTTAGAATATCTTGTCATAAGATTTTTATGTTAGTTTTTTTTTTCGTAT
TTCAGCTGATCATCATGGCTTGTAGAGAAATCGAGATGGGAAAGGTATCA
GAATAAGAATAGTACCTTATCGGGGAAAACTTCGTCGGTAAAAATTTTCG
GGGAAAAATTCGTCACTTGCTGGTAGTTGGTAAACGCATTAAGGCCGGGG
AAAATTTTCGTCACTTGTCCAAAATTTCGTCACTTTTCCCCGACGAAGTT
TTCCCCGATAAGGTATTACATTTGTTGTACACAGACAGAGTAATGTTTTT
TAGTTGTAACAACTGTTAGCAGAACATTTCTCTAGTAGCAAACCTTTATT
TTTATAAAATGGCGTCTCATGGGACAAAGATTTCTTGTATGAGCTCTGTC
ACATGTCAAATGATCTCTTTAGGCACGATGTCAGAGGTATTGGCCTTCGA
AATCTGAAGAAGTGTACGGAGATGTTTCGGTTACTTTGGTAAGATTTGTT
AAAGTTTTTTGTATCTGAGATCAGAGTAGAATGTCTCGAAAACCTTCCAA
AATTAACCTCTCGATTCTAGCCTCGATAAACTTCTAATATGAATATTCCT
GGATTGATGAAGTCCAGATTAATATGAAATGTATATAGTATTATAAATCT
TTGCCTTTTTGTTTGCACATTTATTTGCATTGAAGAATTAGATTGACGAA
CTGATCAACGCGCACTTTAAAGAAGGAAAGATTTCGCAAGTTTGCGATTT
TTCGGCCAAATCGCGAACATTAAGTTCCGCAAAATATGGTCAAATTTGTC
ATTCGCGAAAGTTAATTTTCACAATATACAATTTTTTTAACCCAAAATTT
TCTGAAATAGTTTAATTACAGGAGTATAGGAGAACCTGTTCGCGCTAATA
TGTCCGGTTTATATTTGTTGATATCTAGAAGGGGAGTGATTGTACCCTAT
TTCCCCTCACATGCTGGACATTATGTGTTGTGGTGATGATACTCATATGT
TCAGTACCTGAGAGAACGCAAGGTTCTCCCGTACTGTGCGAGTATCATCA
TCGATACAGCATGGCTCTGATGTGTCGCGAGCACAGAGTTCAATGTCTGG
TAAGCGCTGTGATTTCCCTATCTCGGGATAGGGCCCGGTCCGATGATATC
GGAGGGTCAGCTCCTCTTTTCTCTGTCTATATATCTAGAAGGAGTATAAT
TAGTCGAATATAGTCAAATTTGTCATTCGCCAAAGTTAATTCTTGGGAAA
TAAAGTTAAATGGGCCATTCAAGAAAGTAAATTCCCAAAATTTGGCGATT
TCTTCGCCTGCGAAAGTTTCTTTCTTTAAAGTATTTTCAAACATGAACAT
TGAAATTCCATGTCTTTTTTTAGCTCAAAGAAACTTCAGTGGCCAAAAAC
GTGATCCTCCGTGAATTATGCGCAACGAGGAAAGGGGTAAGCCATAACTG
AAAAGTTGTGGGTCTAGTATTATTTTTCTAATCCTGTAATACGGTATTGT
TGAGGTTTTCTGTGTTTGCAAATCTAACTAAGCTAACTTAAAACTCAAAG
TTAAGTTAAGACCATCTGAAGGCTTCAAAAATGTTATCTGTTCTTATAAA
AATATTTGTACAATGTCTTTGCAATTTGAGTGACAAAAGAGTTTGTTCGT
CATTTTTAGACAAAGAGGAAACTATATCAGCTCCACTACATGGATTGGCC
AGATCATGGAGCTCCAGAAACATTTGAAGTGATCTTACATCTGCTGAAAA
TTGCACGCAAAATTCAACCGAATGATGAAAATCCTTTACTGGTTCACTGC
AGGTAAGTGTATCACGTGATCACTGACCTTTATTATACCCTGGACAAAGT
TTCTCAATCCCGGCCAAGCTAAATGTTTGATCGAATTTTTTTCATAAAGT
AGTACCCTGATGGTAGCACTGCTCATTAGGTGGTAGATAAATACATCGAG
ATCTACTTTTCCTGGAATACTTTTGATGATATAGTGCCGTTGATTTTAAC
ACTGCAATGACTTCCTTGCGGGTACCAACCACTTTCAAAAGAACTCCAAT
CAAAGATGGTGGATATATCTTTGTCCGGGGATGTTTAAAGTTCAATGAGT
TAGGATCAATTCTTTCAGTGAGTATTAAAACTTTCTTCAATGAAATTACT
CTACCAAAAGATTTACTGCAGCATTCTCGTCTATTAGACTGGATTAGATG
TATTTTACTGCAGTTGAGTCTCTTTAAAGTCGATTCTGCACGGGAACACA
ATTCTTTTTGAGATGAGAGAATTTCGAGTTGTGGAGTATGGTTATAGACA
TTGTCAACTAAAGGGACGAAAGACGTTCGAGTTGCATTGTATTTTGATCA
GCTTCTTGTTCTAAATAATAGGAATTTCATTAAAAATGACGAACTAAGCA
TATGCAAGTTAATACAAAGTTTTCAGAAAACACAATTTGCTTTACAGTAC
TTAAAGTTTCGTGGTGTTACAATCATCTTCTGTGAAAGGTAATACAAAGT
TTCGCTAGAAGCAAGTTCCACGAGAGTAAGCCATAAACGTTTAGGTGTTT
TTCTTCTTTTTTCAGTGCTGGCTGCGGGCGAACAGGAGCAATCATCGCCA
TTGATTATGCAAGGAAATTGATCGAAGCCAGGGTAGGAAATTTATCAAAA
TCTCAAAGAAAATTTTCAACGTGAAACAGTTTTTTAAGGTTAATCTACAC
ATAGTTTTTTCACACATGGAACAATTATTTTGTGACTTTTCTTCTTTTTT
TTCAGGCGAATAATATAAGTATATTTGATATAGTGAAACATTTGCGACAA
CAAAGACCTTCTATGGTACAAACTAAGGTATGTCATGTTCTTTCAAACAC
CTTTTCCTTTGTAAAGAATAAGTGAACGTAGTGAACGTAGCCAGTTTCTC
ACTTTCTCAACAATTCGTGACCTTGACAATGACATTGTATTTCCAATNAA
GTGAACGTAGTTGGTTTCTAAATTTCTCAGCAATTCGAGATTATCGTGAA
CTTGACAATGACATTGTATTTTCGACCTCTCAAATACAGGAGCAATATGA
ATTTATCTATGAAGTGGTCAGAGAATTGGTTTTGAAAGAATTGAAAGCAT
GTGACGAAGAGTTTGAAAATTGCAGTCCTGATGCCACTTACGAAAACATT
CAGTTCATTTTGAAGGTAAAGACATTGACCTCTGAATGTTCAGCTATGAT
GAATTAAATGAGAATTCTGTAATCTTTATTACTAAAACCCACTGTCATTT
CACTATCATATTTAACTCATTTTCACCCATTTGTGCTTTTTTATGGTTTT
TGTTGCAGATAAGCGAAAACTTTTTCATTAAAAAAACTAATTACTTTCTT
AGGAAAAGAATTACAATCGCTCAAAATCGGCCGAGAAAACAATAGAAGAT
TCTAACAGTCACATTTCACGTTCCAAATCAGCGGAGGATGTGTGCAGCAA
GCCTTCAACTCCGTCACAACAAAGAAGACAAATTGTTCTTCCAACTGAAC
ACGCTATTAACACTGGAGGAAGCTTCAGAAGGAGTCGAAGTCAAAATAGA
AGGTCTCCAAACGTCCCTTCTGCTGCTGGTTCGAGTAAGTTCAATGTGAA
AGTTCTTCCCTTTCAGCGAAGTATATAAAGAGGCTTTTCCTTTTCAAAAT
TCGCCAAAATTTGGTGAATGTGATAATCTGTTTCACACAAATGGCTTTGC
TAATTGACCACTGTGTTTACCTTTCTTGACTCACAGCAGGGTCTTTGAAA
ACACTTTTGGTAAACGGACCCGTTATCTATGTACGTAAATTTACAATTCC
TTATCCTAGAGGCAATACGTGAGAAACACTTTGTATAGAGTATTGAAAAT
ATTGCACCTCTTTTAAACTCCTCTATATATTTGAAGGAACTGGAATATTG
GTCCCCTCAGCTAGAAGTCAGCATAAAATACTTTCTATAGTTCGAATCTT
ACTTTAATTCGAAGAAAATCATACGTCCCTTGAAGATCGAGTTAGAGAGA
GCCAGTTATATTCATTGATTCATTTACCTCGGATTTTTCTTGACAAAGGA
ATCCTTTCATTCATTAAAAATTGACGAAATGTTTGTCTTGCAGGACCACC
GCTTCCGAGGAAAGGGTCAGAATCAACGGACAAAGCATACAGTCCAAAGA
AGAAGGATACTGAAGGTACTTTCATTTCAACCTGTTATTTACCAGACACA
AGAGTAAATATATGGATAATAAGTCTTAGGAGCGCGTAATACTAGAATAC
AGATATAAGTAAAATCTTTTCGTCATATCGAGTTATATGGTTTACTTTAG
GAAAATTATGGTCCAAATGTTTTTAAAAAGCTTATTATGTAAACTGCTAG
TAATTGGAAAACTTATTTTAGTCAAGTAAAATTTATCAAAAGGTTTTTTG
ATGTTAAACTGTAGTGATCAATTTTTAAATGTATTTTGTGAATCTCAAAC
TATTTTTGGAATTGAAATATCGCAAATACTTTTTTAATATATACTGTTTT
ATCTGCCTTAAAATTTACGATGTATTTTGTTTTAATGGCCTTAAAGATGA
CCTGTTTTCATACATAGTTTTTCCTTGTTTTCAGCATGTAAACAAACGCC
CTCCAAACCTCTTTCCTCCTCAACAGGAGCCATCCAACTTCGATCTCAAT
TTGAATACGAAAACATCCACCCTCCACCCACCGCCGCCCATTCGAAGCCA
CGCTCTACGAGTAGCGAACCAATGAGTCCGTTTGCTGATGAAGAATATAT
CCCGGTGGCCAAACCAGTCGGTCTGACGTCATACCCGATCAAAACAGCCA
TGCTGAATGTGAGTGCGATCGAGCATCAACATCGCCCCATCAAGCAAACA
CGAAGTCATGAACGTATCCCACAATCCTCCATTCCTCCCTCCACAATCTC
AAACATCAATCAAGAACGAATGAAGAAATCCTCCTCGGCAAACGATATTT
GTAACGATCTTAAAGAGAGCCGGGGTGGAGGAGGGAAACAGAAGGACAGC
AAGGCCTCCCCCATAGATGCTTTATACACACCGGTCGAAAAGTCGAAGAA
AATAGCACCACCATCAACCAATCCACCGAACGAAGATTCGCTATACACAC
AAGTAGACAAATTGAAGAAACCAGCGCCCTATCATTCCTCACACGATAAA
GTGATACACAAACCAGCGGCGCCCATGATTTTGGGCAGTGCGGTGGAGCG
GAACCGAAGCAGCGTCAAAAAGACAATCATGCAAGACAAAGCATCCGAAA
TAAAGAAAGGTAATTAATTTATAAAACTGACCTCTTCCTTTCAACGCTCG
CAGATAATTATGGAAAGCCCATAAGGAATCAGAAAGTGTGCGTTGGAAAT
AAAGAGTTTTTGGACCTACCCCGGTGGGGTAGAGGTCCTATAAATTAACC
GATGTCCGTCCGTCTGTCCGTCCGTCCGTTCGTCCGTCTGTTACCAGCTT
TTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAATGATGCA
AAATGGTAATGCCCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTCGGATTTTAACTCTTTTTATTCAGTATGAAGATTTGTTTTGTTTGT
GTTTGACATCATCATCACTTCAATCTTTCTTCACATGAATTTTCAGCTGA
CAAATGGCAGATATCAGTGGAAAGTTCAACGACCTCTACATCACCAACGG
GCGGTGACGCCCCTCCACTACCTGAAAGAACGCCCGAATCTTTCATCATA
ATCGGTATAGCCTTTTATCTTTGCTATTTGGAATTCAATCCTGTCAGCTT
GAAGTTCCCATTCCCTTATAAAATCCACATTTTACCAAAATTTAACCTAG
TTTTAACCCAGTCTTTTCTATTTTAAATTCAAAAGCATTTTCTTGAAATA
TTACAATCAGCGCCTGAAATGAAGGGCATCAAAAAATCCCGTTCAGGATT
GCTTTAGCTTGAAAATTATTATTTTTGGGTTGAACAAGGATCATTTTGGG
TCGGACATTTTCCGATTTCCATTTGCTTGTTTTTGTATTGAGCCGTTTTT
CAACTTTTGTAGATGACAAAGCTNTTTTCATTGGTTTTTTTCCTTATATT
TCTATGTTTTTCACACAAAAACATTATTGATAACAACATCAAGCATGATT
CAATTGTCAATAAAATTGNTTTCAACTTTTGTAGATGACAAAGCTGATAC
TCAACGAAACCAACAACCACTCATCAAGTCATCAGTTTTGAATTCCTCCA
GTGCGAAACCTGGCTCCAAGGGTGGAAGAGATGTATCACCAGAGGAATAT
ACTCCCGTCGCTTCATTACAGAGCTCTACGTCACAACCAACTCCTCAAGA
AAACAAACCGTCCTCGTGGAACCCTTTATCGAAAATGATGAACAAAAATG
TCAGTCTTTATTTTCATTTTCCATCTCCGTCGTTTACAATGATATGAGAG
GATTCTAGTTGACATATAGTGTTAAAAGTTCCCTCTTGGAAGGATTTCCG
TCTCAGTGAAGTACACCTATGTTCAATTCAGCATCTTTCACCAAAAGTTC
AAGAATTATGTGCTTGATTCGAAGTAAATCCACTTTCCGTCTCATACGAA
AAATCTTGCTATGACCACTAGATACATATTGATTAAAGTTAATTCACTTT
TAGCATTCAATATACATCTCTGGGTTGGCTTGCATCAGAAAGCCTTAGAA
ATTTGCTTAAATTTTTTCTGAAATAAAAAAAAACAAAACCTTCTATTTTA
GAAAACGAATGACGAAAGAAATAGTCCAGCAGAAACAAAGAAATCGAACT
CTCTCCCTCCATTGAGCAGTCTTGGTAAGTATGCTAAATATGCATTGACT
TTGTGTTTATTTCTTATAATCTCATTTTAATCAATTGTGCTAATTGGTGA
CGAATGGCACACGTCATAGAAAGATTCGACTCTTCAACTTTGTCATTTAA
TGGCTCGTTAACTAGTTGATAGTCTCCTTCGTTCTTGTTGGTTGTATCTG
ACTAATTACTATCCGTCATTTGTAGGTTTTGGCAAACGCTTAAAGAAGAA
GCCGCAAGGACCGAGGGAAATGCCGTTACATTTTCATTGAAGAAAGATCT
TCGGGTTTGTAATGAAATTTAAATTTCATCAGAAGCGATTGTTTGACCNA
TTTACATAAAGAAAAAACTGGAGTTTTCAATTTCATCAAAAGCGATTGTT
TGACCTTGGTCTAATCAATTGAAGAGTCAATGGATACCAACGAAAAAAAC
CCATCTGATTGGAGGATCGACAGTGAGGTCGACTATTGGTAGATTGTCCC
TGATTTCAAAACTTGGATACACAAATTACTTCGAATTGACGCCCCGGGCG
TTTATTACATTCTTTGGTTTTTAGGAAGGGCGTTTGCTCAGCCAGAGTTG
ATACAAAGGTTGATCTCGGTGGAAGATAAGCAGTCAATTTTGGTGCTTTT
GGTTGAAATGTTGGAAAGATTGTCTATCCATTTTTTGTTGGAAATTCAAA
GAGGCCTTCGTTTCCTCGCTGGTACCTCGCAAGTAAACGATTTGATAACG
TGTTAATAATATGAAGAAAATGTTGTTGCAGTTCAATGTTTTGAAATGGT
AAATAGTAGTAGTAAGTAGATATCTAGATATCTTTTTTGAATTCTATTTA
GTTTACAATAATTATTAGTACAAACTAATTTTTGGAGAAGCGGTCTGATT
TTTCGTTCGATCCTTGCAACAATGCAATGGATCAAGGCCCCACAAAGCGC
CACTTTCTTGAAAGAGGATCGTTTTATTTTGAAACCAGTAGACATTTTTC
ACTATTTACTTTAATATTGGAGATAAAATAGAGAGATTTTTGTAAATTTT
TTATAAAGTAATTATTTTCTATATACGATAATTATAACGCTTTCAACTCA
TTTTGTAATTGCAGTTTTTCCATACAATATAAAACAATGACGCATCTCTT
CCCTCCTTTGGGTAAGCTTTCGGTTCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042751XLOC_042751Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068551-exon-scaffold_485-1575043694:583779..583938TCONS_00068551-exon-scaffold_485-1575043694:583779..583938Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:583164..583266TCONS_00068551-exon-scaffold_485-1575043694:583164..583266Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:582906..582982TCONS_00068551-exon-scaffold_485-1575043694:582906..582982Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:582460..582555TCONS_00068551-exon-scaffold_485-1575043694:582460..582555Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:581895..581933TCONS_00068551-exon-scaffold_485-1575043694:581895..581933Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:581501..581566TCONS_00068551-exon-scaffold_485-1575043694:581501..581566Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:580553..580615TCONS_00068551-exon-scaffold_485-1575043694:580553..580615Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:580187..580329TCONS_00068551-exon-scaffold_485-1575043694:580187..580329Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:579357..579423TCONS_00068551-exon-scaffold_485-1575043694:579357..579423Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:579162..579233TCONS_00068551-exon-scaffold_485-1575043694:579162..579233Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:578824..578949TCONS_00068551-exon-scaffold_485-1575043694:578824..578949Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:578405..578636TCONS_00068551-exon-scaffold_485-1575043694:578405..578636Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:577824..577895TCONS_00068551-exon-scaffold_485-1575043694:577824..577895Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:576730..577362TCONS_00068551-exon-scaffold_485-1575043694:576730..577362Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:574535..574642TCONS_00068551-exon-scaffold_485-1575043694:574535..574642Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:573890..574104TCONS_00068551-exon-scaffold_485-1575043694:573890..574104Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:573465..573537TCONS_00068551-exon-scaffold_485-1575043694:573465..573537Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:573167..573263TCONS_00068551-exon-scaffold_485-1575043694:573167..573263Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1575043694:572311..573133TCONS_00068551-exon-scaffold_485-1575043694:572311..573133Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:583779..583938TCONS_00068551-exon-scaffold_485-1510915933:583779..583938Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:583164..583266TCONS_00068551-exon-scaffold_485-1510915933:583164..583266Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:582906..582982TCONS_00068551-exon-scaffold_485-1510915933:582906..582982Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:582460..582555TCONS_00068551-exon-scaffold_485-1510915933:582460..582555Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:581895..581933TCONS_00068551-exon-scaffold_485-1510915933:581895..581933Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:581501..581566TCONS_00068551-exon-scaffold_485-1510915933:581501..581566Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:580553..580615TCONS_00068551-exon-scaffold_485-1510915933:580553..580615Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:580187..580329TCONS_00068551-exon-scaffold_485-1510915933:580187..580329Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:579357..579423TCONS_00068551-exon-scaffold_485-1510915933:579357..579423Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:579162..579233TCONS_00068551-exon-scaffold_485-1510915933:579162..579233Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:578824..578949TCONS_00068551-exon-scaffold_485-1510915933:578824..578949Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:578405..578636TCONS_00068551-exon-scaffold_485-1510915933:578405..578636Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:577824..577895TCONS_00068551-exon-scaffold_485-1510915933:577824..577895Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:576730..577362TCONS_00068551-exon-scaffold_485-1510915933:576730..577362Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:574535..574642TCONS_00068551-exon-scaffold_485-1510915933:574535..574642Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:573890..574104TCONS_00068551-exon-scaffold_485-1510915933:573890..574104Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:573465..573537TCONS_00068551-exon-scaffold_485-1510915933:573465..573537Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:573167..573263TCONS_00068551-exon-scaffold_485-1510915933:573167..573263Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1510915933:572311..573133TCONS_00068551-exon-scaffold_485-1510915933:572311..573133Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:583779..583938TCONS_00068551-exon-scaffold_485-1491911889:583779..583938Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:583164..583266TCONS_00068551-exon-scaffold_485-1491911889:583164..583266Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:582906..582982TCONS_00068551-exon-scaffold_485-1491911889:582906..582982Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:582460..582555TCONS_00068551-exon-scaffold_485-1491911889:582460..582555Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:581895..581933TCONS_00068551-exon-scaffold_485-1491911889:581895..581933Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:581501..581566TCONS_00068551-exon-scaffold_485-1491911889:581501..581566Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:580553..580615TCONS_00068551-exon-scaffold_485-1491911889:580553..580615Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:580187..580329TCONS_00068551-exon-scaffold_485-1491911889:580187..580329Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:579357..579423TCONS_00068551-exon-scaffold_485-1491911889:579357..579423Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:579162..579233TCONS_00068551-exon-scaffold_485-1491911889:579162..579233Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:578824..578949TCONS_00068551-exon-scaffold_485-1491911889:578824..578949Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:578405..578636TCONS_00068551-exon-scaffold_485-1491911889:578405..578636Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:577824..577895TCONS_00068551-exon-scaffold_485-1491911889:577824..577895Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:576730..577362TCONS_00068551-exon-scaffold_485-1491911889:576730..577362Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:574535..574642TCONS_00068551-exon-scaffold_485-1491911889:574535..574642Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:573890..574104TCONS_00068551-exon-scaffold_485-1491911889:573890..574104Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:573465..573537TCONS_00068551-exon-scaffold_485-1491911889:573465..573537Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:573167..573263TCONS_00068551-exon-scaffold_485-1491911889:573167..573263Clytia hemisphaericaexon
TCONS_00068551-exon-scaffold_485-1491911889:572311..573133TCONS_00068551-exon-scaffold_485-1491911889:572311..573133Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:572311..583938 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.81575	0.816562	0.569163	1.07792	4.92221	5.20762	3.46772	6.15523	1.32051	3.13661	1.64299	0.336388	1.35247	1.13869	0.682079	2.04553	0	1.90991	0.000190694	4.68384e-09	0.70771	2.62982e-08	0.771327	2.70506	1.41589	1.73857	2.50115	8.63777e-05	0.649578	0
Blast
[Close]
BLAST of TCONS_00068551 vs. Swiss-Prot (Human)
Match: PTN18 (Tyrosine-protein phosphatase non-receptor type 18 OS=Homo sapiens GN=PTPN18 PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 5.825e-76
Identity = 126/325 (38.77%), Postives = 200/325 (61.54%), Query Frame = 2 
Query:   59 MGDNLNGLRKYLEKYATLAENRTRNIDIVGNEFQEIRNIAADLKK--LLPANEGAKDVNRKKNRYKDIIPYDVSRVKVEVTSFEDGADYINANIIKDHVKKVCYIASQGPMPQTVVEFWRMIWGYQVKLIIMACREIEMGKARCQRYWPSKSEEV-YGDVSVTLLKETSVAKNVILRELCATRKGTKRKLYQLHYMDWPDHGAPETFEVILHLLKIARKIQPNDENPLLVHCSAGCGRTGAIIAIDYARKLIEARA--NNISIFDIVKHLRQQRPSMVQTKEQYEFIYEVVRELVLKELKACDEEF----ENCSPDATYENIQFI 1006
            M  +L+  R +LE+   L     R   ++  EF +I+  +A  K   +     G++  N +KNRYKD++PYD +RV + +   E  +DYIN N I+     + YIA+QGP+P T+++FWR++W + VK+I+MACREIE G+ RC+RYW  + E +  G   +TL+KE  + ++++LR L  T +   R +YQL YM WPD G P + + +L +++ AR++Q +   PL VHCSAGCGRTG +  +DY R+L+  +    + S+FD+V  +R+QRP+ VQT+EQY F+Y  V ++    L+     +    ENC+P   Y++  F+
Sbjct:    1 MSRSLDSARSFLER---LEARGGREGAVLAGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRVILSLLQEEGHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKVILMACREIENGRKRCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCSTLQNASPHYQNIKENCAP--LYDDALFL 320
The following BLAST results are available for this feature:
BLAST of TCONS_00068551 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTN185.825e-7638.77Tyrosine-protein phosphatase non-receptor type 18 ... [more]
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