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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068918 ID=TCONS_00068918|Name=TCONS_00068918|organism=Clytia hemisphaerica|type=transcript|length=1192bp
GTTGGTGTACAGCGATTTCACATCAAACGAGATCATGACTTCGTCCTCAT
CTAACTCGATATCCTTTAGCTGATCAACCGTTTTCTTTGCTGAACTATTA
ATTTTCGATTGTGGTACGACTGACAACCATTCTGTTATTCTTTTGGCGAT
GTTGTAGTAGGGTGAAGATGGCATTGATAAGACTGGTCTCATCGGTACAT
TTTGTTTGTGGACCTTCGCTGTGCCGTATAATCGGGGTAGTTGTCCACCT
GTTGATCGTAGATCTTCTAGTAACTTATCATCGATTTTACTGTTTTTATT
CAAGGTAATTAGTTCTGAATTTATCCTTTCTTCCTCTTTTAGCACCACTT
CCCTTGCATTCTTACGTGTTGGAGTTTCTTTTACGAATTGACTTAAGTTT
AGAATGTCATTCATTTTTTCCTGGTATGTGTTCTCTTTCATCACACAAAT
CCCTGTGCCTTTATCGAATGGAACTGCGAGTAAGGCGTTTTCTTTCAGGA
AACGGTTAGTCATTTTCACGTGTCTAGGgatcttttgttttgaacagTTT
TTTACGTATTTTAGGGTGGCGATGTTTATGTCGTTGATTGTTTCATTTGT
CACGTCTGGGTTTTGGAGATTATTGAGTAACAAGTCCATCTCGGCAAGGA
AGCCTTTCGAGTCAAATTTCGTCAAAACAGAGTTCTTTGGCCCCATTGAA
AGTGTATCAAGTACGTATTTCGGTACTGGAACCTCGACGTCTAGTAGTCT
AACGGTATTGTGGAGCTGAAATAGCGGCCGATTTTGTTCTTTTGATAAAT
TATCCAGCTTTTTCGATTGTGTTGACATTACTTCATTCCTCTCCATTCTA
ACTTTCAATCTCGAATGGACTATTATCGATGGTAGATACCTCCTGTGGAC
ACTAAATTTAAGAGCGTCTCGTATGTCTTTTACGGTTGCGTCGTGGACTG
CTCGTGCTTTTTTGGCTTTGTTGCATTCTTCTTTCAGTAAACGTTTCTGA
AAATTATGGACGATCGTTGGTTCAAAACACCCATTTGTGGGTacacgaaa
tttcaaaaaacgtgGCACTATATCAGCTTGCAAACAAGTATTAAAAGAGA
AAAGGAAACAATTAAGTCATAAAATTGTGCATGTACatataaaaacaatg
taatcaTCAAAAATAGATACATATACCCAAGACTATCATTAA Run BLAST on NCBI protein sequence of TCONS_00068918-protein >TCONS_00068918-protein ID=TCONS_00068918-protein|Name=TCONS_00068918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MERNEVMSTQSKKLDNLSKEQNRPLFQLHNTVRLLDVEVPVPKYVLDTLS
MGPKNSVLTKFDSKGFLAEMDLLLNNLQNPDVTNETINDINIATLKYVKN
CSKQKIPRHVKMTNRFLKENALLAVPFDKGTGICVMKENTYQEKMNDILN
LSQFVKETPTRKNAREVVLKEEERINSELITLNKNSKIDDKLLEDLRSTG
GQLPRLYGTAKVHKQNVPMRPVLSMPSSPYYNIAKRITEWLSVVPQSKIN
SSAKKTVDQLKDIELDEDEVMISFDVKSLYTN Run BLAST on NCBI transcript from alignment at scaffold_49:23295..24486 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068918 ID=TCONS_00068918|Name=TCONS_00068918|organism=Clytia hemisphaerica|type=transcript|length=1192bp|location=Sequence derived from alignment at scaffold_49:23295..24486 (Clytia hemisphaerica)
TTAATGATAGTCTTGGGTATATGTATCTATTTTTGAtgattacattgttt
ttatatGTACATGCACAATTTTATGACTTAATTGTTTCCTTTTCTCTTTT
AATACTTGTTTGCAAGCTGATATAGTGCcacgttttttgaaatttcgtgt
ACCCACAAATGGGTGTTTTGAACCAACGATCGTCCATAATTTTCAGAAAC
GTTTACTGAAAGAAGAATGCAACAAAGCCAAAAAAGCACGAGCAGTCCAC
GACGCAACCGTAAAAGACATACGAGACGCTCTTAAATTTAGTGTCCACAG
GAGGTATCTACCATCGATAATAGTCCATTCGAGATTGAAAGTTAGAATGG
AGAGGAATGAAGTAATGTCAACACAATCGAAAAAGCTGGATAATTTATCA
AAAGAACAAAATCGGCCGCTATTTCAGCTCCACAATACCGTTAGACTACT
AGACGTCGAGGTTCCAGTACCGAAATACGTACTTGATACACTTTCAATGG
GGCCAAAGAACTCTGTTTTGACGAAATTTGACTCGAAAGGCTTCCTTGCC
GAGATGGACTTGTTACTCAATAATCTCCAAAACCCAGACGTGACAAATGA
AACAATCAACGACATAAACATCGCCACCCTAAAATACGTAAAAAActgtt
caaaacaaaagatcCCTAGACACGTGAAAATGACTAACCGTTTCCTGAAA
GAAAACGCCTTACTCGCAGTTCCATTCGATAAAGGCACAGGGATTTGTGT
GATGAAAGAGAACACATACCAGGAAAAAATGAATGACATTCTAAACTTAA
GTCAATTCGTAAAAGAAACTCCAACACGTAAGAATGCAAGGGAAGTGGTG
CTAAAAGAGGAAGAAAGGATAAATTCAGAACTAATTACCTTGAATAAAAA
CAGTAAAATCGATGATAAGTTACTAGAAGATCTACGATCAACAGGTGGAC
AACTACCCCGATTATACGGCACAGCGAAGGTCCACAAACAAAATGTACCG
ATGAGACCAGTCTTATCAATGCCATCTTCACCCTACTACAACATCGCCAA
AAGAATAACAGAATGGTTGTCAGTCGTACCACAATCGAAAATTAATAGTT
CAGCAAAGAAAACGGTTGATCAGCTAAAGGATATCGAGTTAGATGAGGAC
GAAGTCATGATCTCGTTTGATGTGAAATCGCTGTACACCAAC Coding sequence (CDS) from alignment at scaffold_49:23295..24486 >TCONS_00068918 ID=TCONS_00068918|Name=TCONS_00068918|organism=Clytia hemisphaerica|type=CDS|length=846bp|location=Sequence derived from alignment at scaffold_49:23295..24486 (Clytia hemisphaerica)
ATGGAGAGGAATGAAGTAATGTCAACACAATCGAAAAAGCTGGATAATTT
ATCAAAAGAACAAAATCGGCCGCTATTTCAGCTCCACAATACCGTTAGAC
TACTAGACGTCGAGGTTCCAGTACCGAAATACGTACTTGATACACTTTCA
ATGGGGCCAAAGAACTCTGTTTTGACGAAATTTGACTCGAAAGGCTTCCT
TGCCGAGATGGACTTGTTACTCAATAATCTCCAAAACCCAGACGTGACAA
ATGAAACAATCAACGACATAAACATCGCCACCCTAAAATACGTAAAAAAc
tgttcaaaacaaaagatcCCTAGACACGTGAAAATGACTAACCGTTTCCT
GAAAGAAAACGCCTTACTCGCAGTTCCATTCGATAAAGGCACAGGGATTT
GTGTGATGAAAGAGAACACATACCAGGAAAAAATGAATGACATTCTAAAC
TTAAGTCAATTCGTAAAAGAAACTCCAACACGTAAGAATGCAAGGGAAGT
GGTGCTAAAAGAGGAAGAAAGGATAAATTCAGAACTAATTACCTTGAATA
AAAACAGTAAAATCGATGATAAGTTACTAGAAGATCTACGATCAACAGGT
GGACAACTACCCCGATTATACGGCACAGCGAAGGTCCACAAACAAAATGT
ACCGATGAGACCAGTCTTATCAATGCCATCTTCACCCTACTACAACATCG
CCAAAAGAATAACAGAATGGTTGTCAGTCGTACCACAATCGAAAATTAAT
AGTTCAGCAAAGAAAACGGTTGATCAGCTAAAGGATATCGAGTTAGATGA
GGACGAAGTCATGATCTCGTTTGATGTGAAATCGCTGTACACCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068918-exon-scaffold_49-1491911889:23295..24486 | TCONS_00068918-exon-scaffold_49-1491911889:23295..24486 | Clytia hemisphaerica | exon |
| TCONS_00068918-exon-scaffold_49-1510915933:23295..24486 | TCONS_00068918-exon-scaffold_49-1510915933:23295..24486 | Clytia hemisphaerica | exon |
| TCONS_00068918-exon-scaffold_49-1575043694:23295..24486 | TCONS_00068918-exon-scaffold_49-1575043694:23295..24486 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:23295..24486 . |
Blast
The following BLAST results are available for this feature:
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