TCONS_00068745 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068745
Unique NameTCONS_00068745
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2397

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068745 ID=TCONS_00068745|Name=TCONS_00068745|organism=Clytia hemisphaerica|type=transcript|length=2397bp
ACGGTTATGAAATTATTCAGTATCGTCATATTTAAAAGGTGTGTTTAAAA
CAGTTTTGAGGTCAACTTGCATAATAAGTGGTTCAGACATTTAGTGGAGT
ATTCAAATACTATAGTAACTTCAGTGGGTGAATTTTTATGACCGTCAATG
TCTGGTCTAATCTGCAATATTGGGATTATAAGCGATCATGaCCGGACTGA
CCGTTTCAAAAAAAGTCCGGAGAAAAGAAATGAGTTTCCCGAGGAAAGAA
CCTTCAAGCGTTATCGTCACCAAACTCAAGAAACATGCAATGCACatcga
aaattttcttgGAAAAGGAGCTTGGGGAAATGTATACGCATGTCGTAAAA
GTTTTGGAGGGTCGAAAAAGTACGCGGCCAAGGTGGTGGAATTTGGGAAT
GACCTCGGTGTGAAATGGCAAACTGAAAACGAGATTGAGatctTGAAAGA
AGTTGGTAACCATGGTAATATCGTTGGTTTCCATGGCGTTGTCAGGGACA
CGAGCAGCATTGCCATGATCTTGGAGTTTATTCCCGGGGGATCATTTTTG
GAAGGCTTACTAAATTGGCCGGGCTTCAATGAGAATGGCATGAAAATAAT
TGCCAAACAATTATTGGAAGCTCTGAAATTTTGTCACTCAAATCGAATCA
TTCATAGGGACGTTTGTCCTGAAAACATATTATGGTTTAATGTGCCAACC
GTTAAAAGACCTGACGTCACTCCAGTACTGAAGTTGATCGATTTCAATTT
ATCTCGAAAAGTTCCGGAAGATTCGACGTTTTTACGAGCGGACGCGCTTG
GTAACCCATCTTATATGGCTCCCGAATGCCTGTCGGATGAACCGATCGCC
ACCTTCTCTGGAGATATCTGGAGTGTTGGCGTTCTCATGTTCCTCTTACA
GTCTGGTTACCCACCCTTCTTCAACGATAATTACAATCACCTACTTAAAA
ACATCCAAGAAGCCAACTTCGTGTTTCCACAACATCTCTGGAGTCACGTG
ACCGATGACGGGAAAGCTATCATTCAAGAAATTCTTCAACAAGAGCCAGA
GAATCGACCGACAGCCAGTGAATTACTGACGCACCGCTGGTTCCGTACCC
GAATCAGTACGGCAACCCCGATCATAATCAAAACCACACCGATCAACCAA
GCAGGCAGATACCTCTTTAGAACTCAAAACAACTCATCTACTCTCGAAGA
AAAGATATGGGCTGGTCAGAAAAGATTAAAAGGATTCCTCCGACATCTAA
ACGAGAAAAAGACGAGGGCGAACCATCGGAAATATTCCTTAGTTTTCAAA
GAGCGACAGGCCTTCATTCCGGAATCTCACATGATCACCATACCAACAAG
CGCGCTCATCAATGAGGTCGATTTCTATCAACAAAAAGTCGCCGCAACCG
CTTCCAAAACTCTCGAAAAATTGAACAATAGTATTGAAAGTCTAGAATTC
AAAAGACAAAGTTTTCATTGGTAGTTTGAGCCCCTTAACGTACAGAAGGA
TTGTATGTAATAAAAACTAAACCCCTGTCGCAGAAAATTACGAATAACTC
TGGAATAgctttttgagacaggggtgtagacGTATTTAGCCTAGTaaaga
aaaacttaattttttagttACATGCTTCTCATAATAATCATTTAATTAGT
GGTATGTCGCACCCAGTTTTTTAAACCAAAACAGCAAAGTTAATTGTGTG
TCTAAGATGATTATTTAAAGCTGGGTGTGGCCATGCTATAGGTAATAATT
TATAACGGAAAAATAGTAGAGTAGAAAAAAATACTTATACATTCAAAACG
gaaaaaactttgtaaatattttcttgtatagagtatattatatattttta
atccCATGTGTATATTAGTTGTAACACCGAATTAGTTCTTGAAAATATAA
TAGTTTATTTTTTGGGCTCATGTttattttgagcttttttgatTCATGTG
TGAAAGGCGAAAGACTCGTTTTTCTCGCTCTCTTACGCGAGTTACGATTA
CCATAGCTAAAGATAACATCTTTTTTGATGAATATTCAAGTTTGTTACGA
ATTGATTATCTATTTTAACTCGCAATTTCTAGTGTGTGACCCTCTCAATA
TTTTGCTTTCATCTTGCGAATAGAGTGACTTGTCTGGACCGCTTTGCAAT
TTTTTTAGATGTAAAAGGTTTCGAAAATAGAAAACTCTTTCCCGAGTGTC
CGAGATATACCAAGATGTCCGTTATCCGCGGAGAGCAAGAAAAGAATCGT
GTGATAGACTGAACCATCTTTAAAATtgattgatttcttttttataaata
ggttTATAATAAGTGTATTTTGAGTGGATTAATATGATGTTTAAAATATA
ATCTTTGTAAATAACAAAATtccaaacttttattttttgaccCTACC
Run BLAST on NCBI

transcript from alignment at scaffold_49:117441..129990+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068745 ID=TCONS_00068745|Name=TCONS_00068745|organism=Clytia hemisphaerica|type=transcript|length=12550bp|location=Sequence derived from alignment at scaffold_49:117441..129990+ (Clytia hemisphaerica)
ACGGTTATGAAATTATTCAGTATCGTCATATTTAAAAGGTGTGTTTAAAA
CAGTTTTGAGGTCAACTTGCATAATAAGTGGTTCAGACATTTAGTGGAGT
ATTCAAATACTATAGTAACTTCAGTGGGTGAATTTTTATGACCGTCAATG
TCTGGTCTAATCTGCAATATTGGGATTATAAGCGATCATGGtatgttttt
cttctttcagttttcagtttttttctcaTTCTGGGACATGCTGATGCTGA
CCGCTATTTCTTTCCGCTTGAAACCTTATGAGATGATTCCATATGGGGTG
GTTTATATCTACATAAAATATCGAGATCATCGACATTTGATCATAAGAAT
CTCAAATAGTCAAGAATTGTAAGCGTTGAAGTTAAGCGTAATGTGTCCAG
GGTTAAAATGATGTCAGTGTCGGGATGTCGAGATAAATATTCGTTTTTTC
ATAGTTACAATAAACCTTTATTTTTGCCGCTTTAATTTACCATTTTACTT
TTCCATATTCAAATAATACTCTCAATTATTTTTTGTTGCAAAATTTGCTT
TTCCCAAAAGCCTTAGTGTGATTATCTCTAAATAATTTACTCCGATCTTT
TTTTTGCgaaataatttttcctttttgagAGGAGATTGTTCgttgaaaga
aattttgctgTTATGTCTCTCGTCTGGTAAACTTTTGCGGTGTGTAGAGT
GTAAGCATCTATACCAGTTGAATATATTTTAACAAATATGGCAAATCAAG
AACTGTGTTTaagttttcgttttttaattCCATTCGTAATCTTATCTCAT
AGGCGAGTTAACTTATCGACGGAATCCATTACAAATCAAAACCGCTTATC
CTACATAAAGTGATCAAATGTTTTAGTTTCTACGCCCATGAAAAGCTCTT
TTTGGTGAATAGATTTATATAGTCATTTTTgctatttcatatttttgatc
tcatttctttgaaaagttcgtgaatttttgaaatcctttaaaatttgata
tttatattAACACTGCAATTTGTGCATCTGAGCTTTATAAAGGTCATTTC
TTTCTGCAAACGAAATTTTCTACCTTGTACGTTACCTTTGATCGCATCGT
CGAGTGGTATAAAATCGATAGTTGCCTTGTTTTATGAAATGTATAAGTCA
CTACTCCCCGAGTCGGGATtgggtaattttcgcgcctgctgccttcctta
gatgtggtagccGTTTCTCAGACCCTCTCTCTGGAAAGAATTCGGTTTAA
GCAGGTAATCGGttgacattgaaaaaaattcatcttAGAAGGCTTCGTCG
CAAAAAGCAATTTCTTGAGAAGGACATACAAATTAATTATGACTGATTGG
ATTACATTAAATATGCCCGCTATTTCACTTAAACGTGCTTATCCTCTTTG
TGAACCGAAAATGCCGACTTTCATCCCTAGTCCTTTTTTAGAACATATCA
AAAGCCGGGTAAAAATTGGATTTAAGTCTATTTCTAGCTGGGGTTTCAGC
CCCAAAGATTGAGTGCTACCCTTATATATATAAGGTCATTTTAGGAGGGA
AGACACTCTTCCCCGTTTCTGTTTTCCTCTAACTAGGCCTATATTGGATT
ACTTCTACTTCGCATATAAGATAAATAAAACGGAGAAATTTAAGATGGTA
TGAAATATCAAATTCGAACCAGGGTGCTATTCTCTTTCGGATTCATCACt
tctcaaaaaaaagtcaattaGGATTTAATAAGTGGATAGTACGAACTATG
GGATaaacaaaaaaggttaagaaatttCTCGGTGCTATGTTAAAATGCCT
GGATGTCAAAGAAAAGGTTTTTGAGGATATTGAGTCAAGTGGACGCGGAC
ATAAATTTATTGCTTTATTGCAGTGCGGTCTGTGTTCGTACGGATGAGCG
GAACTTTGAGGTATGTGTCACTATATCTGAATCACCCACTAATCAATGTT
GGCAGCCCGTGTTTTAAAGTTTATATTGTGTTGCAACAACGATCTGGGAA
GAGTTGGACTGAGTATTAACGAACAGGAAATTGTGAAATTGAAGAATCGC
CTCAATTTGCACACGTCACGTGTGATGGTTTGACGTGTTCTgcgtttgat
gacgtcagcagattCGTTTTTATTTAATAGCGTATGTTTGGCATAACTAG
CCCTAGATTTTAAACTCTCGTTCAGTTTGTTGTTTTGGATTTCTTCTTCT
GGTTTGCATAACTTCAAACCGAAAGAAGAACTTATTTTTTCGTTGGGTTT
CCCGACTTCTAAGCGGTGTCATTGAGACTAATGCGTCGATCTTATAATGA
AAACAAGAAATTCAATCGAAATTGAATATGCATGTCGATTCCCGTAGTGC
GGGCGCGCCATCAATATTTATTTTCCTCCAAAAACATTTGCTTCTGAAAT
ATGCATGAAGAAATTGAATCCGTTTGAATTGGGTTTTTGAATAATCGGGG
AATGATTGCTCATTCGATACTGAATATCTATTGCTCTCTTATCAAATGGC
GTTAGAGAAAATCTTGGTGTGAATTTAAGTTGTATTAGAATGTCACCTCA
AAACTGGCTAAGAAAATCACTTCGTGCTAGTTAGAGAAAACTTTGGTGTG
AATTTAAGTTGTATTTGAGTGTCACCTCAAAACTGGCTAAGAAAATTACT
TCGTgctaatttgaatattttttgatgttacttaatctttcttttttatt
atagaCCGGACTGACCGTTTCAAAAAAAGTCCGGAGAAAAGAAATGAGTT
TCCCGAGGAAAGAACCTTCAAGCGTTATCGTCACCAAACTCAAGAAACAT
GCAATGCACatcgaaaattttcttggtAAGATTATTTTCTCCTTGACCCT
GTCTCGAAGTAATGATTTTGTACAGTTTCTGTAGTACTATGTATTCGAGT
ATAGGAGTGATTCGAAAGTTGCGTAAAACATCAGAATTTATGAGcaatag
attttaaaattttattgcaGTGTTTtgcatttttgcaattttaatcTCAA
AGAATAGTTTTGAGGATAGGTCACTCATAATGACCGTTACTTGCaactat
tttacaaatctaaaATCCAAACTGGATTAATTTTCTTTAAGCCGTGAGAT
TAGATCGGTTCCCGACTGAATAATGCATAGTTAACGGCCGATCAGTCTAT
TCTTTAATTCACAGAAAGTTTTTAGTTAATCGCCTGAAGGCTCGGCTGAC
GTCAATAGGATATATATTTAGAAGAGTTTAGTTTTCAAAACCCATGCATG
CCGGTTCACGCAGTGTTTGGAATCCCTGTTAAGTTCGTTACATTTGAACT
TGCTTTAATTAACCCCTCACAGTTACTGATGGACTTTGAAATTTATACCC
ACAGATATTATATAACTGCTCTTAGATTTCCCGTGGAAGTGTATCCAGTT
TTGAAGTCGATTAGTCCGGCATGTTGTTTACCAATTTATCTTAGGTTTTC
GAACCTTTGAATTTCAAAGCATTCGAATCGTGCTGTTGACgaacaaaatt
gaaaacaagatgacATAGACTAGTCAGCTCTAAATTTGGACACGCTTCCT
ATATACGGATAGCCCTATCCAGTCAAATAGTTAAGATCAGTGTTTATACT
TTATTGGTACTAAAAGCTATGGTGTTTCATGATATTGTGTAACTTAAAAC
AAATGCGTAACATTGAGTTTTgttaagtaaaaagtaaaaacttagcatta
taaaattataaaagcTAGGTCATTTGGATTTTACATTGTTTAACTTTAAG
TACATTTGTGTACATTCGCGATTTGCGATATTGAATTTTTAGTTCAACCA
AATTGTTAAACTAAGGGACTGAAGCATCCATACTAAATCCTTGTTGGTAT
GGCGCAAATCTACTGGAATAAAAAATCATCTTTCCACAAATTGCTTTAAA
ATTTGCTACGCTACTATCGCCTACTTTTTACCAAAAAGTCAATTTCCGAT
TTAAAGATCGTGGTATATGTTAATCTTAAAGCACTTAGAGACGTGACTTA
GCCAATTCTAAATAATTGATTTCAAAGACTCAAAGGAGAAGGAAAAATTC
TGGGATGCTACGGATAAGAGTGAAGGAAAAAGGGTAATAATCCTGAGGCA
TTTTGATTTCTTAATCAACAAACAGACGATAAGCTCTAATTGTAATGGCC
TGCTCATTAAGAAGCATGATTATTTTTGTAGATTAGCTTCCCGCTGAGAT
GATTTATCTTAAAGTCTCAAACCTTCGAATGCGTTCAGCCTATTTCATTT
TTGCAAACATCGGGGGCTCATAAACATAGATTAAGGTTTTCAAAAGAAAG
GGGAGGAGATGTAAGTCTGGGAATTACGTGTTGCAAAATAAGCGTTGGAc
gtttttaaggcttgaaaGCTTAGTAAGAAGCGTTGAACGTCTCTAGGGGT
TCAAAGCTTAATCAAGAAGAGTTGGCCGTCTTTCGCACCAGTTCTAATGA
TGGATTAAATATTTTGGCTGTCAGCCGTTGGCAGATGACCAATANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTGTAGTA
CTATGTATTCGAGTGTAGGAGTGATTCGAAAGTTGCGTAAAACATCAGAA
TTTATGAGcaatagattttaaaattttattgcaGTGTTTtgcatttttgc
aattttaatcTCAAAGAATAGTTTTGAGGATAGGTCACTCATAATGACCG
TTACTTGCaactattttacaaatctaaaATCCAAACTGGATTAATTTTCT
TTAAGCCGTGAGATTAGATCGGTTCCCGACTGAATAATGCATAGTTAACG
GCCGATCAGTCTATTCTTTAATTCACAGAAAGTTTTTAGTTAATCGCCTG
AAGGCTCGGCTGACGTCAATAGGATATATATTTAGAAGAGTTTAGTTTTC
AAAACCCATGCATGCCGGTTCACGCAGTGTTTGGAATCCCTGTTAAGTTC
GTTACATTTGAACTTGCTTTAATTAACCCCTCACAGTTACTGATGGACTT
TGAAATTTATACCCACAGATATTATATAACTGCTCTTAGATTTCCCGTGG
AAGTGTATCCAGTTTTGAAGTCGATTAGTCCGGCATGTTGTTTACCAATT
TATCTTAGGTTTTCGAACCTTTGAATTTCAAAGCATTCGAATCGTGCTGT
TGACgaacaaaattgaaaacaagatgacATAGACTAGTCAGCTCTAAATT
TGGACACGCTTCCTATATACGGATAGCCCTATCCAGTCAAATAGTTAAGA
TCAGTGTTTATACTTTATTGGTACTAAAAGCTATGGTGTTTCATGATATT
GTGTAACTTAAAACAAATGCGTAACATTGAGTTTTgttaagtaaaaagta
aaaacttagcattataaaattataaaagcTAGGTCATTTGGATTTTACAT
TGTTTAACTTTAAGTACATTTGTGTACATTCGCGATTTGCGATATTGAAT
TTTTAGTTCAACCAAATTGTTAAACTAAGGGACTGAAGCATCCATACTAA
ATCCTTGTTGGTATGGCGCAAATCTACTGGAATAAAAAATCATCTTTCCA
CAAATTGCTTTAAAATTTGCTACGCTACTATCGCCTACTTTTTACCAAAA
AGTCAATTTCCGATTTAAAGATCGTGGTATATGTTAATCTTAAAGCACTT
AGAGACGTGACTTAGCCAATTCTAAATAATTGATTTCAAAGACTCAAAGG
AGAAGGAAAAATTCTGGGATGCTACGGATAAGAGTGAAGGAAAAAGGGTA
ATAATCCTGAGGCATTTTGATTTCTTAATCAACAAACAGACGATAAGCTC
TAATTGTAATGGCCTGCTCATTAAGAAGCATGATTATTTTTGTAGATTAG
CTTCCCGCTGAGATGATTTATCTTAAAGTCTCAAACCTTCGAATGCATTC
AGCCTATTTCATTTTTGCAAACATCGGGGGCTCATAAACATAGATTAAGG
TTTTCAAAAGAAAGGGGAGGAGATGAAAGTCTGGGAATTACGTGTTGCAA
AATAAGCGTTGGAcgtttttaaggcttgaaaGTTCAATTAAGAAGCGTTG
GACGTCTCTAGGGGTTCAAAGCTTAATCAAGAAGAGTTGGCCGTCTTTCG
CACCAGTTCTAATGATGGATTAAATCTTTTGGCTGTCAGCCATTGGCAGA
TGACCAATAACGTCAGATATTCCTTGGTAAACTGTATACGATGACCTCAA
CAAGGAACCCTAAAATAGACATCAGCACGTATTATCCTTTGGAAGTAAAG
CTTTAGAATGTCGATGCAgagatttcattgaaaatggaACACTCTCCTGT
TGACAACGGCATCAGCAAGTTTATCTGCTCTGTACTAGAAAATGATTGTT
TAGGGAACCTCAATACCAATGACCTCAACAAGGAACCCTAAAATAGACAG
GACAACCCTATTATGTTAAATTTAGCTGTGCATCAGACATCCGTAGcatc
aattttcttttcacCTTAAAgaagaaatgttttcttttttcgttGCCTTC
CCCATTTTTCCAGAGCAGATTTCAGCAACATCCAATCTTCTTGCTGCAGA
ATAGTGACGATAGGTGTACAAAAATTGCTAGAGGAAAATTCTTTACCCTT
GAGGAAAGTTAGAAAATCATCAATTGAAACCAGAGGGATTACTATCTAGA
AATTGAGGCCGacattgattttgttttatttaccATACAGAAAATTATTT
GTAGTCAGGGGAAGATCATTGTTTTCACAAAGTGCTTACGTCACATGTCG
ACAACCATCTCAGGAAAGTTAGATAAGAGATTTGGGAGATGATACCATGC
CTAATAAGCCATTAGAATTATGGGATAAGCATACTATGGTATGCGGTGTC
GAGGTTCCCTAAGCAATCATTTTCTAGTACAGAGTAGATAAACTTGCCGA
TGCCGTTGTCAACAGGAGAGTGCtccattttcaatgaaatctcTGCAtcg
acattttaaagctttactTCCAAAGGATAATATGTGGTGATGTCTCCTTT
GCCTATCACAAAACTGCGAAACCTTATCATAACGGCTGGTTAATACGTCA
TCAATTAAATGATAAACTTTGATTAAATTAGGGTTCGATCTTATCCTTGA
TTCGTCTATACTACTCGTGCTGTGTACCCTCTTCTTACTTaaagtaaaaa
ttcaaaacttcgaataaattttaaaactttctaaGACTTATTACAAAACT
TTACCACAGTCACAAAAGGATTTGAATTATGCTTGcaacatcaataaatt
acaaagatttttctttgaaagaaaatgtcggCTGATTATTCATCAAGAAA
GTAAACCGTTAGATCCTTATCTAAAGGGATGCCATCACACAAGATTTGAG
GGCTTGATAAGAGAAGAAACAACGATGACTTGGAAATTCAAATGCAAAGA
ACTTAACGTGAAGTTTTATGGGGAAACTAATCACTTCACGGTAACTCGAG
ATAAGATTTGACAGGGTTTTAATAAAGTAGAACTCCCAGACAACCCAATA
CTGAGTTCTAGTTTCAAATAGAAGTAACTGTGCTAACTATGAATATTTCG
CTGTTCGGGAAATTGAAATTCACAGCTCCTGCTGGTTCTTTACGTCATAA
GTCGATTTTGCTTTCCAATAAATTCCCTTTGCTTTCACCCGAGTGTAATG
ACCTGTATCACATTTTCGGGAGAGTGCAATTGAGCTATTTCAGAAAAATG
TTATACCCCCTTTTTTGAGGAGGTCGTTTTGGGAAAGGTGACCccttaga
ttttttttcaatttttcggtaCCCCCTTGGCCAAtcctggatttttacac
tcaaAAAACTAGACCCATCCGTTAGATATTTAATTTTCCAGACCACCTTG
GGCGTCACATCTCCTCAACTTAGGGGTTACAGACTATTTATCGGCTAACT
TTTATCCACTAAAGATTCTCAGCTCTACAGCTCTAAATTGCCGCCTTTTC
TAAGgttgtttttaaaagaatcgAACACTNATTTATCGGCTAACTTTTAT
CCACTAAAGATTCTCAGCTCTACAGCTCTAAATTGCCGCCTTTTTTAAGG
TTCTTTTTAAAAGAATCGAACACGAAACACGAAAGTTACTTATCACTATA
TTGTAGAGTTAAGTACCGTAAGTTCATTGAGTCCATTGTCTGAATACCAG
CCTAAAAGCGTTGTGAAAGCACCATTGgaagaaaaaagtaaatttagcTA
GCGCTAGTTTCACAGCTTGTAAAAAGTACCCACTGTTTAGGTTGGAACCT
TCGCtgactttctttcttttttttctttgactATTCCCTTGATCTCCTAT
GGCCGCTAAACTTCACGGTAACGCGATTCTGTTATTCTGTTAAAAACCTC
CATTCATTTCATTCTCAAACGTGTAGAAATGAAATAGAAAATCTCTGCAT
GCTGATTGGGGGCCAATAAACAATCGCCATCAAACTCAGCGgatcaataa
aaagaaatcgGGAGGTTGTAAGATGTCAGCTTAAAAAGACATCAAAAACT
tctgaaacttttttcataagaacgtGTTCTACTATtcgctaaaatataaa
aacaagcTTGGCACAAAATCTGGTAATCGTACCAAGATTATTATTTTCAA
TCCCAACTCTAAATCCCCATATATTTTCTTTGAACACGTTTTCGGATTAA
TTCAGCGTCATTTTACTGATGAAAGAATccctttttaggtttttatatAT
TCTTACAATAAATAAGAAATCGTCATCTAGATAAAGATCTGTATTGTTAT
GCGAATGAGAATTAATTTCAGGAAAATAGGTTGATATAACAGAGAGTAGT
TCAGAAGGTTAGCCAGTTATTTAATCGAAGTTCAGCCTCTCACATCTCAA
AGGAacaaagttttatataatttgactgGTACTATCTGCGTGAAGAAGAT
GAGAGAAAatctaaaaggattttcaaatttcgatCCCATCTTAGGAAAAG
GAGCTTGGGGAAATGTATACGCATGTCGTAAAAGTTTTGGAGGGTCGAAA
AAGTACGCGGCCAAGGTGGTGGAATTTGGGAATGACCTCGGTGTGAAATG
GCAAACTGAAAACGAGATTGAGGTGAGTACAAAATTAAATAcattgaatt
ttattatttttcctgtttttttctAGATTCAAAACTCACTATTTGAGCTC
GTAGGTTTTGTAAGTGGTTTTAAATCggattccccccccccccaaacccT
TGTCCAATTtcgataaaaattatttttttcttttttttttttaaattaaa
aacccCCTATTTGAGCTCGTAGGTTTTGTAAGTGGTTTTAAATCggattc
cccccccccccacacacATTGTACAAATTCAgtcaaaatgatatttttca
attgtaatcaacattttctgtttttgcctacggtatgctctctctctctc
tgaaAGCGGATTAAAATATTGATGATAGTTTTTTCATGCCTGACCTGAGG
TAACTTTAGgttgtttttgattttcttttcaactaAAGGTAAAGAtgtat
ttttaagttttataaACCGCAAAAGATATTTTCCATCCCTAAGCCTCGAA
ACTTATATAAAATGCCAAAAATTTCGAAACGTTTCTTTTCTTACCTATGT
TTTCCCTTTGATACAAATTAttcgtatttttctttttcagatctTGAAAG
AAGTTGGTAACCATGGTAATATCGTTGGTTTCCATGGCGTTGTCAGGGAC
ACGAGCAGCATTGCCATGATCTTGGAGTTTATTCCCGGGGGATCATTTTT
GGAAGGCTTACTAAATTGGCCGGGCTTCAATGAGAATGGCATGAAAATAA
TTGCCAAACAATTATTGGAAGCTCTGAAATTTTGTCACTCAAATCGAATC
ATTCATAGGGTATGTACACttctattgttttaactttgagTTTGTCCATG
CCCGTATCTACCACGCATTGCGTATTATTTTCGACATGTACTTGCGGTTT
TTCATTTCCTATAAGGTTTATATAAGTTacatttgatttaattttggtTT
GATATCAGCCTCTacaatcaaccaaaattaaattttgaacaaGACGTCAT
TTTGTATACTGACTTTAAACATGTGTTTTTTTTGTGTAGGACGTTTGTCC
TGAAAACATATTATGGTTTAATGTGCCAACCGTTAAAAGACCTGACGTCA
CTCCAGTACTGAAGTTGATCGATTTCAATTTATCTCGAAAAGTTCCGGAA
GATTCGACGTTTTTACGAGCGGACGCGCTTGGTAACCCATCTTATATGGC
TCCCGAATGCCTGTCGGATGAACCGATCGCCACCTTCTCTGGAGATATCT
GGAGTGTTGGCGTTCTCATGTTCCTCTTACAGGTGAGTGTTGGTTCTTCA
CATTCTTCTCACGAACCTCTCTACAAAAGATAGTCGATTCTCATTCATTA
GAATTTGCCATATATTACCGTCAATGTgggatttcaaaatattgaattcT
AATTCCTAACTCCTTTaagagaaaattattattttttataatcGTCTGCT
ATCTTTTCTCCTTCAGTCTGGTTACCCACCCTTCTTCAACGATAATTACA
ATCACCTACTTAAAAACATCCAAGAAGCCAACTTCGTGTTTCCACAACAT
CTCTGGAGTCACGTGACCGATGACGGGAAAGCTATCATTCAAGAAATTGT
aagattttgagaatttttagtTATATATGGGAAAGACACTTCTTTATCTT
CAAACTTTGCACTCATTTTGGAAAGGTTACTTTGATGTTATAACCAGCGA
TAAAATCCgcttcagaaaaaaaactttcattttattttcttcaGCTTCAA
CAAGAGCCAGAGAATCGACCGACAGCCAGTGAATTACTGACGCACCGCTG
GTTCCGTACCCGAATCAGTACGGCAACCCCGATCATAATCAAAACCACAC
CGATCAACCAAGCAGGCAGATACCTCTTTAGAACTCAAAACAACTCATCT
ACTCTCGAAGAAAAGATATGGGCTGGTCAGAAAAGATTAAAAGGATTCCT
CCGACATCTAAACGAGAAAAAGACGAGGTAATTTATGTCGAATTATGCAA
TTAAAGAAGTATTAAATCTCATATCTAGTCTGCATGTTTTTCTCAATCAT
CATTGGTTTAAAATGCTTGAtatcttaaaaattgaaatttttttatgaaa
catCATTCTTTTCTTTCAGGGCGAACCATCGGAAATATTCCTTAGTTTTC
AAAGAGCGACAGGCCTTCATTCCGGAATCTCACATGATCACCATACCAAC
AAGCGCGCTCATCAATGAGGTCGATTTCTATCAACAAAAAGTCGCCGCAA
CCGCTTCCAAAACTCTCGAAAAATTGAACAATAGTATTGAAAGTCTAGAA
TTCAAAAGACAAAGTTTTCATTGGTAGTTTGAGCCCCTTAACGTACAGAA
GGATTGTATGTAATAAAAACTAAACCCCTGTCGCAGAAAATTACGAATAA
CTCTGGAATAgctttttgagacaggggtgtagacGTATTTAGCCTAGTaa
agaaaaacttaattttttagttACATGCTTCTCATAATAATCATTTAATT
AGTGGTATGTCGCACCCAGTTTTTTAAACCAAAACAGCAAAGTTAATTGT
GTGTCTAAGATGATTATTTAAAGCTGGGTGTGGCCATGCTATAGGTAATA
ATTTATAACGGAAAAATAGTAGAGTAGAAAAAAATACTTATACATTCAAA
ACGgaaaaaactttgtaaatattttcttgtatagagtatattatatattt
ttaatccCATGTGTATATTAGTTGTAACACCGAATTAGTTCTTGAAAATA
TAATAGTTTATTTTTTGGGCTCATGTttattttgagcttttttgatTCAT
GTGTGAAAGGCGAAAGACTCGTTTTTCTCGCTCTCTTACGCGAGTTACGA
TTACCATAGCTAAAGATAACATCTTTTTTGATGAATATTCAAGTTTGTTA
CGAATTGATTATCTATTTTAACTCGCAATTTCTAGTGTGTGACCCTCTCA
ATATTTTGCTTTCATCTTGCGAATAGAGTGACTTGTCTGGACCGCTTTGC
AATTTTTTTAGATGTAAAAGGTTTCGAAAATAGAAAACTCTTTCCCGAGT
GTCCGAGATATACCAAGATGTCCGTTATCCGCGGAGAGCAAGAAAAGAAT
CGTGTGATAGACTGAACCATCTTTAAAATtgattgatttcttttttataa
ataggttTATAATAAGTGTATTTTGAGTGGATTAATATGATGTTTAAAAT
ATAATCTTTGTAAATAACAAAATtccaaacttttattttttgaccCTACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042878XLOC_042878Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068745-exon-scaffold_49-1491911889:117441..117630TCONS_00068745-exon-scaffold_49-1491911889:117441..117630Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:117441..117630TCONS_00068745-exon-scaffold_49-1510915933:117441..117630Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:117441..117630TCONS_00068745-exon-scaffold_49-1575043694:117441..117630Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:120145..120265TCONS_00068745-exon-scaffold_49-1491911889:120145..120265Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:120145..120265TCONS_00068745-exon-scaffold_49-1510915933:120145..120265Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:120145..120265TCONS_00068745-exon-scaffold_49-1575043694:120145..120265Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:126635..126762TCONS_00068745-exon-scaffold_49-1491911889:126635..126762Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:126635..126762TCONS_00068745-exon-scaffold_49-1510915933:126635..126762Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:126635..126762TCONS_00068745-exon-scaffold_49-1575043694:126635..126762Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:127331..127549TCONS_00068745-exon-scaffold_49-1491911889:127331..127549Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:127331..127549TCONS_00068745-exon-scaffold_49-1510915933:127331..127549Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:127331..127549TCONS_00068745-exon-scaffold_49-1575043694:127331..127549Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:127780..128022TCONS_00068745-exon-scaffold_49-1491911889:127780..128022Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:127780..128022TCONS_00068745-exon-scaffold_49-1510915933:127780..128022Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:127780..128022TCONS_00068745-exon-scaffold_49-1575043694:127780..128022Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:128207..128338TCONS_00068745-exon-scaffold_49-1491911889:128207..128338Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:128207..128338TCONS_00068745-exon-scaffold_49-1510915933:128207..128338Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:128207..128338TCONS_00068745-exon-scaffold_49-1575043694:128207..128338Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:128485..128717TCONS_00068745-exon-scaffold_49-1491911889:128485..128717Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:128485..128717TCONS_00068745-exon-scaffold_49-1510915933:128485..128717Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:128485..128717TCONS_00068745-exon-scaffold_49-1575043694:128485..128717Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1491911889:128860..129990TCONS_00068745-exon-scaffold_49-1491911889:128860..129990Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1510915933:128860..129990TCONS_00068745-exon-scaffold_49-1510915933:128860..129990Clytia hemisphaericaexon
TCONS_00068745-exon-scaffold_49-1575043694:128860..129990TCONS_00068745-exon-scaffold_49-1575043694:128860..129990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:117441..129990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.827287	0.746092	1.48738	1.30391	0	0	0.499796	0	0.574721	0	0.685731	0	0.623065	0.621288	1.27268	1.05306	1.48621	2.68479	0.917384	2.70123	2.32402e-07	0	0	0	0.244876	0.312361
Blast
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BLAST of TCONS_00068745 vs. Swiss-Prot (Human)
Match: DAPK3 (Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.133e-40
Identity = 86/271 (31.73%), Postives = 143/271 (52.77%), Query Frame = 2 
Query:  308 LGKGAWGNVYACRKSFGGSKKYAAKVVE----FGNDLGV-KWQTENEIEILKEVGNHGNIVGFHGVVRDTSSIAMILEFIPGGSFLEGLLNWPGFNENGMKIIAKQLLEALKFCHSNRIIHRDVCPENILWF--NVPTVKRPDVTPVLKLIDFNLSRKVPEDSTFLRADALGNPSYMAPECLSDEPIATFSGDIWSVGVLMFLLQSGYPPFFNDNYNHLLKNIQEANFVFPQHLWSHVTDDGKAIIQEILQQEPENRPTASELLTHRWFRT 1099
            LG G +  V  CR+  G  K+YAAK ++      +  GV + + E E+ IL+E+  H NI+  H +  + + + +ILE + GG   + L       E+      KQ+L+ + + HS RI H D+ PENI+    NVP        P +KLIDF ++ K+   + F   +  G P ++APE ++ EP+     D+WS+GV+ ++L SG  PF  +     L NI   N+ F +  +S+ ++  K  I+ +L ++P+ R T ++ L H W + 
Sbjct:   19 LGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN-------PRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 277
The following BLAST results are available for this feature:
BLAST of TCONS_00068745 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPK35.133e-4031.73Death-associated protein kinase 3 OS=Homo sapiens ... [more]
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