TCONS_00068941 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068941
Unique NameTCONS_00068941
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068941 ID=TCONS_00068941|Name=TCONS_00068941|organism=Clytia hemisphaerica|type=transcript|length=157bp
TTTTGGTTCTTTCCCTGTCAAACAAACGAAAATTTGTTgctttttgagtg
ttttgataaaatatcgcattttgataaaatagcgCTTTTTTAATTGACAT
TGGGAAGAACGTACATGTTTTTAATTTACCTTTGATCACAAAATATCTTA
TTGCCTT
Run BLAST on NCBI

transcript from alignment at scaffold_49:737092..737248

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068941 ID=TCONS_00068941|Name=TCONS_00068941|organism=Clytia hemisphaerica|type=transcript|length=157bp|location=Sequence derived from alignment at scaffold_49:737092..737248 (Clytia hemisphaerica)
AAGGCAATAAGATATTTTGTGATCAAAGGTAAATTAAAAACATGTACGTT
CTTCCCAATGTCAATTAAAAAAGcgctattttatcaaaatgcgatatttt
atcaaaacactcaaaaagcAACAAATTTTCGTTTGTTTGACAGGGAAAGA
ACCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042961XLOC_042961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068941-exon-scaffold_49-1491911889:737092..737248TCONS_00068941-exon-scaffold_49-1491911889:737092..737248Clytia hemisphaericaexon
TCONS_00068941-exon-scaffold_49-1510915933:737092..737248TCONS_00068941-exon-scaffold_49-1510915933:737092..737248Clytia hemisphaericaexon
TCONS_00068941-exon-scaffold_49-1575043694:737092..737248TCONS_00068941-exon-scaffold_49-1575043694:737092..737248Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:737092..737248 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068941 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top