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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069159 ID=TCONS_00069159|Name=TCONS_00069159|organism=Clytia hemisphaerica|type=transcript|length=571bp
ttaaaacttcaaaaagcttctgagaaatttgattggcttgtttttaaTGT
TCCTCTTGGATAGAAGCAGGGGTTGAGTGACTTCTTATATCTAATATAGC
CCTTCAAACAGTCTTATTTCTTCCCAAAGATTTTCTAGAATTTCTAAAGG
AAAATCACATCGAACAGGATCCTCAATAATCGAATAATCTGGCTTATAGT
AGTAAATACTAAATTAGAAGATCATAGCTATATTTTGTATTCCTTcaata
tcttttctttcttgtgTTCAGGACTTTGATCTGTGGATGGATGGTTCAAC
GACCAACAACCGACGACCGAGAAAGCTGGTACACGAAATGAAAGACTTGA
CCCTGGATTTTAAGGACGACTTGTGTGGTCCTGCAGCAACACGTAAATTT
ATGGCTGGATAGCTGGACTCCTCGACTAATACTGCTCAGCTGCTTGCTGA
TTTCTCAATATCCAAGTGTAGAAGATGGAAATATACCTGTTGTCATGCTG
GAATCGTATCAAGAAGACAAAGGCATGAGAACCTCAGGGAGAAAaagcaa
gaaagaaaattttttctgctt Run BLAST on NCBI transcript from alignment at scaffold_495:214257..215220+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069159 ID=TCONS_00069159|Name=TCONS_00069159|organism=Clytia hemisphaerica|type=transcript|length=964bp|location=Sequence derived from alignment at scaffold_495:214257..215220+ (Clytia hemisphaerica)
ttaaaacttcaaaaagcttctgagaaatttgattggcttgtttttaaTGT
TCCTCTTGGATAGAAGCAGGGGTTGAGTGACTTCTTATATCTAATATAGC
CCTTCAAACAGTCTTATTTCTTCCCAAAGATTTTCTAGAATTTCTAAAGG
AAAATCACATCGAACAGGATCCTCAATAATCGAATAATCTGGCTTATAGT
AGTAAATACTAAATTAGAAGATCATAGCTATATTTTGTATTCCTTcaata
tcttttctttcttgtgTTCAGGACTTTGATCTGTGGATGGATGGTTCAAC
GACCAACAACCGACGACCGAGAAAGCTGGTACACGAAATGAAAGACTTGA
CCCTGGATTTTAAGGTAGGActtatttgaaatattcttaagagGATTAAG
gtactaccgtcaactgctctaacttgggactatccgACATCTGAcacaac
atgggacggcaattcggccaccatttttaaccgaacctccaaagtcattt
gatttgacttaatttaatgaacggcgtattaaaaaatacacgaaaacaaa
tttgttgtcaaagagatttaacagtaagtgaaaatagaggccagatatca
actagtcccatgtttcgaccaattgtcccaagttagagcagttgacggta
atagTTTTTTTCAAGGCTGAGGGAAGTGGTGATTGGGTATATGAACTGAT
GATAATAGACATTCTTTTTGgtatgttgttttttatttatttttaatcat
tttgtaGGACGACTTGTGTGGTCCTGCAGCAACACGTAAATTTATGGCTG
GATAGCTGGACTCCTCGACTAATACTGCTCAGCTGCTTGCTGATTTCTCA
ATATCCAAGTGTAGAAGATGGAAATATACCTGTTGTCATGCTGGAATCGT
ATCAAGAAGACAAAGGCATGAGAACCTCAGGGAGAAAaagcaagaaagaa
aattttttctgctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069159-exon-scaffold_495-1491911889:214257..214620 | TCONS_00069159-exon-scaffold_495-1491911889:214257..214620 | Clytia hemisphaerica | exon |
| TCONS_00069159-exon-scaffold_495-1510915933:214257..214620 | TCONS_00069159-exon-scaffold_495-1510915933:214257..214620 | Clytia hemisphaerica | exon |
| TCONS_00069159-exon-scaffold_495-1575043694:214257..214620 | TCONS_00069159-exon-scaffold_495-1575043694:214257..214620 | Clytia hemisphaerica | exon |
| TCONS_00069159-exon-scaffold_495-1491911889:215014..215220 | TCONS_00069159-exon-scaffold_495-1491911889:215014..215220 | Clytia hemisphaerica | exon |
| TCONS_00069159-exon-scaffold_495-1510915933:215014..215220 | TCONS_00069159-exon-scaffold_495-1510915933:215014..215220 | Clytia hemisphaerica | exon |
| TCONS_00069159-exon-scaffold_495-1575043694:215014..215220 | TCONS_00069159-exon-scaffold_495-1575043694:215014..215220 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_495 | supercontig | scaffold_495:214257..215220 + |
Blast
The following BLAST results are available for this feature:
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