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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069276 ID=TCONS_00069276|Name=TCONS_00069276|organism=Clytia hemisphaerica|type=transcript|length=364bp
GTGCATTATTTTGTATGATGGACAGATCATAAGGCACTTCTTGGTCACCT
TCATCAGGTTGTCTTTCATTGAGGGGAGGAGGTTGAGCATTTCGTTCATT
CTCTTCTTCGATGTTCGGTAAAATATCCTCATCGTTCATCAAATTGTTGA
ATAAACGATCTTCCCTCGCTTTTTGGTTTGTGTTAACTAGAGGTTTAGTG
TGTTGTCTTTTTCCACCTGTTATGACCTGATGTAGCTTATTTTTCCTCTG
TTTGCTTTCCTTTCTGATTTTCACTGCCTTCttctttcccttttttctcg
TGTTCTTCTTACGTTTCATTTTGTGGCGATTTTTTCttctcattctattt
gtgaTTTTTGCTAT Run BLAST on NCBI transcript from alignment at scaffold_496:679004..680210- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069276 ID=TCONS_00069276|Name=TCONS_00069276|organism=Clytia hemisphaerica|type=transcript|length=1207bp|location=Sequence derived from alignment at scaffold_496:679004..680210- (Clytia hemisphaerica)
GTGCATTATTTTGTATGATGGACAGATCATAAGGCACTTCTTGCTCACCT
TCATCAGGTTGCCTTTCATTAAGAGGAGGAGGTTGAGCATTTCGTTCATT
CTCTTCTTCGCTGTTCGGTAAAATATCCTCATCGTTCATTAAATTGTTGA
ATAAACGATCTTCCCTCTCTTTTTGGTTCGTGTTGACTAGAGGTTTAGTT
TGTTGTCTTTTTCCTGTGGCTTCCTTTTTGGTAATTTTCTTACTTCTTTT
AATGCTCTTTGCAATATGCAGATTGGTTTTCTTTGCGATGGGAACATTTT
GAGCTGAAAAGGAAACACCGTCTTAATCAAGTAGAAAGGCTTTTATAAAA
ATGACTGAAATAACTTATATATCTTTAACCAGTTGGGAAGGCGTATCATA
GCAACAAGGTGATTCAATAAATACAAAGCCAAAAAATACAATTCTTATGC
TACAGACAACGCATTTTTGTAAAGGAAGAGGATATAATCCTTTAAAAAAA
GCACACAATTAACAAGCTACTTACTCTGTCGATTTCTTCCCTGTGCATTA
TTTTGTATANGTTTCTTTGTTCTTGCTTTTGCTAGTCACAACGTTCTTTT
TATTGGTGCTAGTTCGCTTAGCAGACGGTCGACCTTGATAAACGTAAAAG
AATTATTTGAATTAAGCTCAGGAGTGAAACGAAAAGAGCATAGTAAACTT
GATTTCCAGTCTCTGTTAACAATACTGTCCCGTCATAACAGATGAACGTA
CTAAGCTCCAGAAAGCGAATGAAATAAAAAGTTACAAATCGTTTTTTTAT
CTACGTCATTAAATACTCTTACTTTGGTCATCAGTTCTCCCTCGTGCTTC
ATTTTGTATGATGGACAAATCATAAGGCACTTCTTGGTCACCTTCATCAG
GTTGTCTTTCATTGAGGGGAGGAGGTTGAGCATTTCGTTCATTCTCTTCT
TCGATGTTCGGTAAAATATCCTCATCGTTCATCAAATTGTTGAATAAACG
ATCTTCCCTCGCTTTTTGGTTTGTGTTAACTAGAGGTTTAGTGTGTTGTC
TTTTTCCACCTGTTATGACCTGATGTAGCTTATTTTTCCTCTGTTTGCTT
TCCTTTCTGATTTTCACTGCCTTCTTCTTTCCCTTTTTTCTCGTGTTCTT
CTTACGTTTCATTTTGTGGCGATTTTTTCTTCTCATTCTATTTGTGATTT
TTGCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069276-exon-scaffold_496-1575043694:680178..680210 | TCONS_00069276-exon-scaffold_496-1575043694:680178..680210 | Clytia hemisphaerica | exon |
| TCONS_00069276-exon-scaffold_496-1575043694:679004..679334 | TCONS_00069276-exon-scaffold_496-1575043694:679004..679334 | Clytia hemisphaerica | exon |
| TCONS_00069276-exon-scaffold_496-1510915933:680178..680210 | TCONS_00069276-exon-scaffold_496-1510915933:680178..680210 | Clytia hemisphaerica | exon |
| TCONS_00069276-exon-scaffold_496-1510915933:679004..679334 | TCONS_00069276-exon-scaffold_496-1510915933:679004..679334 | Clytia hemisphaerica | exon |
| TCONS_00069276-exon-scaffold_496-1491911889:680178..680210 | TCONS_00069276-exon-scaffold_496-1491911889:680178..680210 | Clytia hemisphaerica | exon |
| TCONS_00069276-exon-scaffold_496-1491911889:679004..679334 | TCONS_00069276-exon-scaffold_496-1491911889:679004..679334 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:679004..680210 - |
Blast
The following BLAST results are available for this feature:
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