TCONS_00070114 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070114
Unique NameTCONS_00070114
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2530

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070114 ID=TCONS_00070114|Name=TCONS_00070114|organism=Clytia hemisphaerica|type=transcript|length=2530bp
ACAAATTACTAGCTTCTTTGGCGGAGGATCGAACGCTCCAAAGCCTAACC
AACAAAAAGAAGGCAAGAAACGTGATAACAAGAAAATTCAAGAAGAAATT
GGAGAAACTGTATTCCTTAAAGAAACTGAACCTAAACTAAAGACTGCAAC
ATAATGAATGAAGAAGAAGTTGATGTCAACCTATTTGCTCCGGATGGAGA
TGAAGACGACTTTGAAAACGGAGATAGTGGTCATGACCAGATCAACATAA
ATTCAAAGTTTGCTTTGGTAAGTCCTAATGCATCAGAATACACATGTCTT
GTCAAGAAAGTTCAAGATTTGATTGAAGAAGGTCAAGGGGAAACAATCTA
TGAAATCGGTGTTGATGAAAAAGGAGAGTCTGGCTTGAACGATGAAGATT
TCAAGGCTTCGATCGCCACACTACAAAGTATTGCTGAACAACTGAATTGC
CAAATCAATATGTTACGCGAAAAAGACATTGAAACACGCAAAACGGCTGA
ATTTCTAATACGAGGAAATTTGGTGGAAGAAGATTTCTCTGAAGTTAGAG
TTGCAGTTGTAGGAAATGTTGATGCAGGAAAAAGTACACTGTTGGGTGTT
TTGACACACGGCTCATTAGACGATGGTAGGGGAACGGCTCGTTTGAAATT
GTTCCGGCACAAACACGAAGCGGAAACAGGCCGGACAAGCAGCGTTGGAA
ATGATATTCTTGGATTCGATTCGAAAGGAGACATTGTAAATAAACCAGAT
AAGCACAGTGGTGCGTTAGATTGGACACAGATTTGCAAAGAATCTTCCAA
AGTGGTCACGTTCATTGATTTGGCTGGTCACGAAAAATACTTGAAGACAA
CTGTATTTGGTATGACTGGACACGCCCCTGATTTTGCAATGTTGATGGTC
GGTTCCAATGCTGGGATTGTTGGTATGACTAAAGAGCATTTGGGATTGGC
ACTGGCACTCAACGTTCCTGTTTTTGTTGCTGTAACAAAAATTGATATGT
GTCCTCCTAATGTTCTACAAGAAACCATGAAATTGTTATGTCGTATCCTC
AAATCTCCTGGTTGTCGTAAAATCCCTGTCATCGTTTCCAAtaaagatga
cgtcatcgtttcaGCTACTAATTTCTCTTCTGAAAGGATATGTCCGATCT
TTCAAATCTCCAACGTGACCGGAGAAAACTTGGATTTGTTGAAAGGTTTT
CTCAACCTGTTGAGCGTACGTGGTCAATACGTTTCGTCCAAACCGCCTCT
GTTTCAAATCGATGACACATACTCTGTATCgGGTGTAGGTACGGTCGTCT
CAGGGACCACCATGCAAGGCGTCATCCGTTTAAACGACATCTTGCTATTG
GGCCCGGACAGCACGGGAGCTTTTCAACCTGTACCGATCAAAAGTATACA
TCGAAAACGTTTACCGGTCAAAGAAGTTCGAGCAGGGCAAACAGCTTCGT
TTTCAatgaaaaagaTCAAACGACAAGACATTCGAAAAGGAATGGTACTA
GCGGGCCAAGATCTTGAACCACGTGCCACGTGGGAATTCGATGCGGACGT
GTTAGTACTACATCATCCAACCACCATCAGTGCGAAATATCAAGCTATGG
TTCATTGTGGAAGCTTACGCCAGACAGCGACCATCGTCCGAATGGATAAG
GAACATCTGCGGACAGGTGACAAAGCCTCATGCCGTTTCCGGTTCATGAA
ATCTGCGGAGTACATAACTATCGGAACAAAGATGATATTCAGAGAAGGGC
GGACCAAAGCGGTAGGCACTATAACAAAATTACATGAGGAAGTTGCAGGG
CGTAGCACCCATAATACACGCCAAAATAAACAATTCAAAGCTCTCATGCA
CCAGCGTGGAAAGGGCGGTAATCGTAAAACTCCGGCGCAGAATAAGCCGC
CACAAGCAGCCGCAGCTGCAGCTACGGCGTCTGCGAAATAGCTGTTCTGA
TTTTATTTTACACTCTTGCTCCTTTTTAgtatctttttaaaatattttat
attatatttgctaagcttttatatttttttttttgtgaagaGTAGATTAT
TTTTTAGGTATTTTCTTGCTCATAGTCACAAGTGTGGCTTGTAGGTGTTT
TATTTACTTACTAGGTGTTGATTTTTGATATTCATGACTTGATATGTCAT
CTTAAAACTCACTTAAAGGCattgaaaatcgaatttttaACAAGTGATCT
AGGTACGGTTTTTTAGGTCGTTCCTAAAAATATAGCTCTGGGGTCACATT
TGCCGGATCTAGAACTTTCTATGATTGTTTATCTGTATTGTTCGAAGGTC
AGTACCTTTTATTCAGAGCTAATTACAACTAAAAGTTAACCCCTACACAA
AAAGGTTgaatatgaaaatttgtttttgattatCTTGTGTTTTATTATGT
AGATATTTTATATCATAATAACTTGTGGTATTTTTAATTAAggtattttt
gtgatttttgttgttttatgaaacaaaaagacTACTAAAAACTGAAACTA
CACTCTTAGtagtgaaaaaatcaattttcc
Run BLAST on NCBI

transcript from alignment at scaffold_513:397190..409873-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070114 ID=TCONS_00070114|Name=TCONS_00070114|organism=Clytia hemisphaerica|type=transcript|length=12684bp|location=Sequence derived from alignment at scaffold_513:397190..409873- (Clytia hemisphaerica)
ACAAATTACTAGCTTCTTTGGCGGAGGATCGAACGCTCCAAAGGTTTTCA
TTCGTTTTTAATACTGGATTTCCAAAAATATTGTTATGCTAGGTTTTAAC
TGTTTTTAACTAACATTACAAGTCATTACAACCAGGGGATGTCAATCGAA
AAATTTGATTTAATACCGAATCAAAAACAATCGAACTTAATCGAAGCCAA
TCGAATAATTGATTTTCGATTAGCCGAATTGATTGAACGCCAATCGATTT
TCACATCTTTTTTTTGATTGGATTCGATTACCGTTCGATTGGTGTTTGAT
TGACGTTCAATTAGTTTCGATTAGCTTCGATTGCATATACTTTTCGAATT
TAGCCCCGCAAAATTTAAACTTTTTAAAGTAAAATCTAAGTTGATCGAAC
GTTAATTGAAATACGTCAAACTCAATCAAAACCAATCGAATTTCACATGT
TTTTAGGTTTCGATTAGAATTTGATTGGCGTTCGATCGATCGATTGACAT
CCCCTGGTTACAACAAACAACACAGGTGACATCATTAGGCGATGGGAATT
TGATGTTCTGTTTACCGTCGCGTTTCAAAAAATATTTGATGCGGCAAAAT
TTCATTATTCATTATTCATTATTCCTACCTGGTCCTGGTGCTTCCAATCT
CCAACGAAGTTGAATTCCACCGTAAAATCGAGCTGCTTTCACTTTCGGAA
TCAAAATGACATGCGCGAAAATTCAAACGCGTTTGAGATGCGTCTAAAAC
GCAAATTTCTAAAACGCCCTTGATGCCGCCCACTGCTTAAAAAAATGCCT
GCCCCATTCGCGGACGTGATTGGAACCATGTTTTTTACTTGAGGCGCACA
TTTTGTTAGTGAAGATGTTATTTTTGATTCACTTTGAGTGTTTTGGATAG
CTTGGCACAGGAAACAGAAGAAAATAATGAGTTTTTTTAAGAAGTAATTC
ATGAACTTTTTTGAGCGGCGGCTCAAGAGCATGCGGGCGGTCGACGGTAA
ACATAACATCAAATTCCCATCGCCTTAGGGGCAACATCCATATTCAAAGT
CGCCACGCGTAATGTCTAACAGGAAAAGACACCGTTAGTGGGTAGGTATA
TCAAAATATTGAGAGTTAGTTGTGGCATTGATGACCAAAATGAAATTCCA
CTAAAAATTCCAAGAAAAAATTAAAGACCGCTTATCGTAGCGCTCACTTC
TATCTTCGCTTTTTCCTTTAGTATGCTATCCAAAATCCTTTCCCTGAGCA
ATTTAGGGGTGGTTTCAGAGTATAACATTCTTGCCTTGGGAGTTTTAAAA
GCAAAGGCCATTTAAAAATTGTGATGAAATTCTGCCGTTGTAAACCTCCG
AAAATGGCAACCTTTGTAGCGGGCCGTTTGTTTTGATTTTAGCGGGAATG
AAAGCTTTGGTAAAATTTTGGTCAAATCATGAAGACCGTTAAGGAGGTGG
GTGGTTATGTTTTGAAAGTAACGGTCATTTCCCATTACACGTGGCGACTT
TGAATATGGACGTCGTCGCCTCTCAACTAACGTGGGACTATCTGACAAAA
TATGGGATGGCAATTTGGCCACAATTTCACCAAACCTCCAAAGTTATTTG
GTTTAAGTTAATGAACATGGCGTATTAAAAAATACACAATTTCTCTTTCG
CACCGAAAGGCTTTTAAATCTTTGACACCCGAATGTCTGGAAAGAAGAAG
ACCAAATTAGTGGTAAAATGATGGACATTTGACGTCACTCGCGCGGCAAG
TTACACACTCGTTATTTGTTAATCCCATCTGGCGATAGGCGATTAGGCGG
CAGCGTTCTCCAATTCTCCAATTGATGTCCAATCATTTTGAATGAAAACA
AAAAAGTTAAATAGGGCCCANTTCTCCAATTGATGTCCAATCATTTTGAA
TGAAAACAAAAAAGCTAAAAAGGGCGCGCTATGATCAGTGCAAGTTATCG
TGACATGTTGTGACAGAAAGTATGATTGATAAACTTGGTGGAGTTATCAA
AACAAATTTGTTGTCAAAGAGATTTAAAACAGTAAGTGAAAATACAGGCC
AGATATCAACAGTCCCATGTTTCTACCAGATCGTCCCAAGTTAGAGCAAT
TGACGGTAGCTAAGTTGAAGTTAGTTTGATATTAGTTGATATATATATTA
AAGCTAAAAACAACTGAAAAACATCAACATTGAAAATTCATTCGTCATGG
ACTTTGTTGCAGCGATGTCACCTCATTTTTGTTTTTAAATGCTGAGATCT
TGGACTTGAAAATACTGCTCTGTATTCTAATGTAACAATTTAAAACCAAA
ATAATTTAATCATCAAGATTTGCTCCAAAATAATTTGACAATATTTCAAA
TTTTATAATAATTTAAAATCATTAATAAATAAGGTTGTACTATTGAGAGT
GATAATATATATCACAATTTGAGTTTTGAATTATTGTTTTCATTATTATT
CTTAATTTACAAATAATGAATAGAAACATNTGTTGTTTTACGGGCTAAGC
TACCCCAAAAAGAGGGTCGGTCGGTCGGCAAAAAATAAAAACAAAAATAA
AATTTGACCCCATAAAATCCTTAAAAGGCAGAAAAAACTACTACATCTTG
ACAAAAATCCAAAATAGAAAATAAAAAGACACAAAAACTCAAATTCATGG
ATGAAATAAAAAATTGAACATAAAATTCTCAGAACCTTGAAAAAACTACC
AAAATTTCAAAATTTAGCAAATTTTTCAATCTGTTAAGCAATCAAAACAA
AAATGTACTACCAAAATCTATTTTATTTTTATTTCAATTTTTGAGATTTC
AGGGTAGGTCGGGCCCATAAAACAACTAATCAAATTGGTCTCGCCATACC
TGTCACAAGTTTTTAAGCAAATTTAGTTGAGTTTTGTGTACCATCTTACA
CTATAAAAGTCAATCTAGACAATGTCTAGGACGCCAAAATTTTGCACTCC
TAATAAAATTTTATTGTCAATAAGTTTCAAATTGTTTTAAAAATTCTTCC
CTGACATAGATGTACACTTAAAAGAACAGCAGCCACTCTAGGGAAAAAGG
GTTAAAGTGAATAAGTGAATAAGGCTTTTAAAATCAGATTCAAATATAGA
GTTGATGATGAATCAGGATGAATGAGAAGATGTTTTCTTTAAAATTAATA
CCAATTGGGTGCCATTCATTGAAAAAAAGGACTACTTCAGTCCTTTTATA
ATTACGTAGATTTCTGGCTTGATTTCCAATCTCTCCCACAAATAAGGGTG
ACAGTTAACTTCACTTTTAGTTGGTTTGTACCAATCTTACATGGTGCTTC
TCAAGAAATATGCTAATCCATAAGTGTATTCCATATTTTATAATGATTCC
TCAGATGAAAATATATTCTAACTACTACATGATTCTTGAAGTTAACTTTG
AGAATTCAAAGGGGTTTCAAGTTTCACTTTATGAATTTTACTGTGATTTC
TTAATTTAAAAAAATGGTGAAAATAGACTTGTCTCAAACTAATTTGAGAT
TCTCCATTTCCCCATATTTTGTTGCCTTTTTAGCCTAATAGACTAGAAAT
ACGGTGAAAAATACAAAAATTCTTTGTTTATGTCAATACACAAACAACCA
CTACAGCGCCAACAAACAATTTAAAGTGAAAAATTTATACGGGATAAAAA
ATACCAAATGTTCAATTCATAATCCAGATCCAGGTGACAATTTCAAATAA
TATAATATAAAAGAAAGTCGGAAAATGTTCATTTTGACTTTTCATTACAT
GAAAAACAACAAAATGAGTTTTTTTAAATTACAATATTTCGTACTCAAAA
CTAGTACATCATTCAGGTAAAAGTTCTCTTACAAACTTGTCGATGAGTTT
TATGTAAAAATCTTGCTAATTAAAACAATTAAAATTAGAAAATGTTCACT
AGAGGATAAAACAATTAATCAATAAAATGTGTTGAATAGTAAACAATAGA
AAAATATAAGACACAAGAACATAATTAGTCAAAATCCCAATGGAAAAAAG
AAAGGCTAGAACAAAGAGGCCTGAATAGGAGGCAAGACGATAGAAACGAC
TCAAGAGACAAATCATCATCATCATCATCATAGATTCTAAATTTGAAAAT
TTGTTTGGATATTACATAGCATTTATTTTTTGAACATAACCTTATTCATT
TTTCAGGATTGTTAAACAAACAGAGTAGTCATCCTTGTTTTTAAACTGTT
AAAATGAAAATATATTTCAAATTATCCAGGCTAAAGTTAACTAATGAAAA
TGTAGCGTAATTTAAAAATATTCACATTGATAAATATACATCATAAACTA
TAAAATCTGTTTTCAGGAAATCAGATTCAGTTTTTAAATAGTTTTGCTAC
CAGAAATAATCTTAACATCTTGAAATTAAATCTTGAATTTTTCTGTGTAG
GCAAAACCTAAGAGGATTATGTATGAAAGTTACCTTCCCCTGGGTCAAAC
GAAACGAAATTATTGATCATGTAGTTTTCATTTCAGCATAAATGTTATGA
GGTATTGAAAGAGTCCAAATCATGTTTTATATTTCAAATATAGATGATTT
TCATACATATTTCTTTTAGCCTAACCAACAAAAAGAAGGCAAGAAACGTG
ATAACAAGAAAATTCAAGAAGAAATTGGAGAAACTGTATTCCTTAAAGAA
ACTGAACCTAAACTAAAGACTGCAACATAATGAATGAAGAAGAAGTTGAT
GTCAACCTATTTGCTCCGGATGGAGATGAAGACGACTTTGAAAACGGAGA
TAGTGGTCATGACCAGATCAACATAAATTCAAAGGTAGGTGGTTTGGTTC
ACAGATATCTTATATTTAAAACACTAATTATTGGCTACTTCGCCCCTAGA
TGAAGCAAAATAATCCATCTTGAATGAAGTGGCGCCACAATTTAGCTTGC
GTGATCCTTGAAATATTGAAGTTATTACAGTGTCAAAAAAACTGACAGTG
AAAACCATGGTTTCTACTGCAGTCTACTTTCAGCAAAGATGGCTTAACCT
GTTTTTGCTTGGGAAAGATAGACTAGCTCTATCTAGTGTTTTAGATAAGA
TATCTGATGGTTTGTTTGTATACATGAACCTTAAAGGTTCCCGCCTCACT
GCTTTTATCAGTAGTTCACTGAAATTTTTTTCCAAATTCATACCAAATCC
CACAAAATTTTAAGGTTTTGAGACTTTTACACTCGACTTCCTTTTTTTCT
AATTCCTCAGTTTATCAGGGACACGACAGTTGATGAATTGAGGCAAAGAC
CGTACAAAAAACTTGAAAATTCCTGATTCCCTTTAACTTTTATTTCACTT
GAAATAAATAATATTATTATGAAATATATAAAATAAAATCCTTTATCCTG
CATCAGTAAGGTTCTAGCGATTCCATCATTCCATTCCATCTCACGTGGAG
GTGGGATATAAACCGTATCTGTCTTCCTCGCATTCGATTGAGAAAATTGC
ATATTGACGAATGCGCTTTCAAATGTTTTGCTCAAAATTCGAATGTTTTG
TTTTGAAAAGACAGAAAAAATAAAACAAGGGGAAAATACATAAATTGTAG
CGATTGAGAATGTTTGTGTCAATAGGATGCAGAAAATCTTTAAGTTATTT
TGATTTTTACTTTTCTTCGGCGGATATGGATTGAGCAAGACTAGGCAAGC
CTCGCCACCAATACGGTTTTTACTGACCCTGTATATCCTGTATCCCACCT
TGAGAAGACCGTGTAACTAAATATTATTAATGTAGTTCTCCAGTGATATT
CCATTTATATAACACAACATGTTTGAGTTAACAGTGGTTTTAGGAAGATT
TTCAAAAGAAACTCGGCTTAAACTTGGCACACAGGTTCCATGGGTTGTTT
TGAATATCTGGCATTTCTTTTTTTTTCATTTTACAGAAATTTTGATTTTG
GGGCCCTAGGCCGAGTTTTTTTTATTTGTTTTGTTACAATTGAGCCTAGG
AATATCTTTAAGCTACTGAAGTTGAGCCCAGTGCGTTGCCCACGTTCGAC
TATTTTAAAGAATTATCTTATTTTATCTTAACATTTTAGTTTGCTTTGGT
AAGTCCTAATGCATCAGAATACACATGTCTTGTCAAGAAAGTTCAAGATT
TGATTGAAGAAGGTCAAGGGGAAACAATCTATGAAATCGGTGTTGATGGT
AAAAACCAGCAGTTTACTTTTTAGTACTTTTTTATATCAAATCGAGGGCC
TGTCGCTTTTGACAGAATTCGCTTCAATTATTATGGTATTATTTCTTTCG
ACTTTTTATGGGTTAATAATAGAAAAATCATAATTTTTGGAAAAGAGTAT
TTATTAAACAACTTGACTTTTAGGCTTTTGTGTTTTTTAGTATGAGGTCT
TGTTAACCGGTTACTTTTTCGAAGAGGGCTACACGACTTTTTGCGCAATG
CAATTGGTTCTTTTCGCATGACGACGGGCCTACATTGTCCAGAGTTGCCC
GTCGTTAGGAAAATTCATTGTGATGTCACTTTTTCAAAGGAAAATGAACA
ATGGGTTGACATCATTTCTCTCATTTTTTATTTCTGACGTCAGAAATTAT
AAGAATTTTTGATCTCTTTTCACTTGTTTTTTTCGCTTTATTGCACTATT
TTCCCTAGATATATCGCTAAAAATCAATCGAAGCTGAAGGAAATGATTAA
CAAATACAATAATGACCGGTTTTTTCGGGCTGTACTGAAAATATAGCCCT
CGGTCAATGCAACAACCTCCCAAGCTCGGTCGTTACTTGACCTCGGGCAA
TATTTCTCAGTGCAGCCCTCACTAACCGTTCATTATTGTATTATTACTGT
ATTATTTCTTTCATAGAAAAAGGAGAGTCTGGCTTGAACGATGAAGATTT
CAAGGCTTCGATCGCCACACTACAAAGTATTGCTGAACAACTGAATTGCC
AAATCAATATGTTACGCGAAAAAGACATTGAAACACGCAAAACGGCTGAA
TTTCTAATACGAGGAAATTTGGTGGAAGAAGATTTCTCTGAAGTTAGGTA
AATTATGAACTTGAATTTAATTTTTCGTTCGTAAACCTGTAATGGACTTA
TTTTACTATTTAGCTGTCCCATTAGTGGCTGGGTAGCTCAGTTGGTAGGG
CATTCGCCTTACGATCCTAGAATGCACCCCCCTGAGCTTAGGGGGGGGGG
GCTAAACCATTTTTGCTTGATTGAGGGCGGAATTTTTCAAAAAGTANNNN
NNNNNNNNNNNNNNNNNNNCTTAATTATCATAGAATGCACCCCCCTGAGC
TTAGGGGGGGGGGGCTAAACCATTTTTGCTTGATTGAGGGCGGAATTTTT
CAAAAAGTACTTGGGGCTAGCTTGCTAGGGGAGGGCTGAGTGTTGTGTAA
TAGAACTGGGGGCAGAGATGATAGGTAACATAAATTTTAAATTATGTTAA
GAATCTATGCTGTGGCGAAGGTTTTAACCCTCTTGAAAAGATTTATAGAG
AATTTCCATGCAAAATTTCTTTGATATTTTGTATGATGTCTGACAGTCTG
AAGTATCCCTGTTCTAAGTAGTATTTTTCATTCAAATATCTTGCTTATAT
TTTTTTTCACTTCAGAGTTGCAGTTGTAGGAAATGTTGATGCAGGAAAAA
GTACACTGTTGGGTGTTTTGACACACGGCTCATTAGACGATGGTAGGGGA
ACGGCTCGTTTGAAATTGTTCCGGCACAAACACGAAGCGGAAACAGGCCG
GACAAGCAGCGTTGGAAATGATATTCTTGGATTCGATTCGAAAGGAGACA
TTGTAAATAAACCAGATAAGCACAGTAAGGAGACACAATCCTTGCTCAAT
ATAATTATAGTAATAGAATGCATTTTCATAAATCACATCGAAGGCCTGCT
AACATTAAGACTATATGTCAATGCAGCGTTTTTAGATACCTTTTCTGATC
TTTTATTGTCCATTAATTATAATATTTTTATATTTCCATACTCTCTGATT
CAGATGAGTCATAAATTGTAGTCTTTCAGTATGAAATAAATTCTCATGTC
AAACAGTGTCAAATAGAGAAAACAAACGGGGAAGAAAACTGGAAATATAA
TGATTTTTTTCTTTGATTCCACACAGGTGGTGCGTTAGATTGGACACAGA
TTTGCAAAGAATCTTCCAAAGTGGTCACGTTCATTGATTTGGCTGGTCAC
GAAAAATACTTGAAGACAACTGTATTTGGTATGACTGGACACGCCCCTGA
TTTTGCAATGTTGATGGTCGGTTCCAATGCTGGGATTGTTGGTATGACTA
AAGGTATTCAAAACAGACATTTTTCTGATACATTAGATAATTCAATTTCT
TGAATGTTCCATGAGGATGTTTGCATAATGACGGTTCCGTTCTTTCCCAA
ACGAAATTGAACAATTCTTTTAGTTTATTCTTGGAATTCATCGATGTTTT
AACCAATAGATCGGCTTGTTTTTGTTTTGGAGCAGAGCAGAACCGTTTTG
CGCGACATGGTATTTCCCGAAAAATATTGCCATCTAATATCATGGCTCCG
AATGGGGTTCTAGGTCCCCCCCGACAAATTTAGGTCCCCCCTAAGTTTTA
GGTCCCCCCACTTTTCAGTAAGGTTCAGGTCCCAGTTGAAATCTAAAGGT
TCAGGTCCCTACAAAAAGTACTTTCAAGGTTCAGCAGGTCCCATCAAAGA
AAAATAATTCGGCAATTCAACAAAGCAAAACATTCGAATCGCTTCGCAAA
AATGGAATGTCGTTTACCACCCCCTCTCGCACGCAGATAAAAATAAAACT
GTAAAATATTTCACAACAGAACATTAAAACCAAACAAAAAAATATTTCTA
CGAGTTCTTAATTATTGCAATTAGCCCCCAGAACTTTTGTACAGCCCTTC
AGGTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGCGGAGC
CATGAGCCAAAAGTAATGTTTCATTAAAGAATGATATTCTAACAGGTGAT
GGAAAATTTAAATTCATCCCATAACAATAACCCACCAATACCAAACATTA
CTCGTCCCTGTGTTTACCTACAGTTTAAAAATGTGGGATTATGGTGGCGT
TGTTGACCTCAAATCGGCGTTGTTTCTGGTCGTTTTGACTTTAATTCTTT
TTGGTAAACAATGTCTTTGACACCTTTTTTATAGAGCATTTGGGATTGGC
ACTGGCACTCAACGTTCCTGTTTTTGTTGCTGTAACAAAAATTGATATGT
GTCCTCCTAATGTTCTACAAGAAACCATGAAATTGTTATGTCGTATCCTC
AAATCTCCTGGTTGTCGTAAAATCCCTGTCATCGTTTCCAATAAAGATGA
CGTCATCGTTTCAGCTACTAATTTCTCTTCTGAAAGGTGGGTGGTGTTGT
ATATCACAAATTCTTCATCTACATTTCTTTTTTATAAAAACCAGTAATTT
TTTTATTGAGGCGCGGCTGTTGTTTATTATTTGTTCGTCATTTTGTTCTT
AGTCTGTTCTTAGATATTGGGCAAAATTATTTTAGGCTTTATATACAGTC
TTTTGCTACCTTGACCCTTAAATTACTTCAAATCCAGAAATTATAGGCTC
GACATTGCTCTTAAATTGTTCTAAATTTTTGATGATTATGAAACTCATTG
CTCTTATAAAGTTACTCTTATAAAGAAAGGAGTTTACCCTATTGGCTGAC
TTTGACAGTAATGTAAAAATTACCACTCGCTAAATCGTTTAGATTCTTTA
GGGTAGTGGCGTGGATTGCTAAGTTGCAAATACTGATAAAGACTTTAAAT
CTGACAGAGATTGTTGATCAAGGAAACAGAATAGATATGCTTTGAGTTTT
CATAATTGTGTGATATATTTCATAGGCGAAGCGAGATACCCTGCAAAATT
TATGAGGGAGTGCAGACGTTTATGACATATTCATTATCTTTTGATAAAAC
AAAGACAATAATTACAATGTCGTAAAAACCGCTCTCATCCATAAATTTTG
CAGAGTATCTCGCTACGCCTATGTATTTGCCACTTTCTTAGGATATGTCC
GATCTTTCAAATCTCCAACGTGACCGGAGAAAACTTGGATTTGTTGAAAG
GTTTTCTCAACCTGTTGAGCGTACGTGGTCAATACGTTTCGTCCAAACCG
CCTCTGTTTCAAATCGATGACACATACTCTGTATCGGTAAGTACACGTTT
TTTATAAGATTATCCTAAATTAATGAAGCCTTTGGATGTTCTTATTCTTT
TGAGTTTTAAGCTTGAAAATGTTCTTAACATGTTCTTATTAACACTTATT
ATCTTTTTACCCATTTTCCTAAGAAATCGCGTTTTTAGAGTCCACAAAGC
CTTTAATTGTTCTTAACTTGTTCTTAATATTTTGGCCAGCGAAGTCTTAT
GTTCTTATATAGTTTGTTCTTATGAAAAAACGTGTATCCAAGCATCAAAA
TAACTTAGACATTACTAATCACTGCTCAAAGTTTAACGCTAGATGGTATT
TGGTATTCCGATACTCGGTCCGAAAGTCAATATCTAACTTCTTACTGCTT
GCAAAAACTGTTTCTCTTTAAACAATACATCTGGTACATACATCATCGTC
TACAAATATTTTGGCCGGTTATACAAATGACTGTATAGTATAGACCATAT
ATTCTTTTGTCAGTATAGTGGTCTTAAGAATCCTTCAAAAAATCTCTTCT
TTCTTCTCGCCACAGGGTGTAGGTACGGTCGTCTCAGGGACCACCATGCA
AGGCGTCATCCGTTTAAACGACATCTTGCTATTGGGCCCGGACAGCACGG
GAGCTTTTCAACCTGTACCGATCAAAAGTATACATCGAAAACGTTTACCG
GTCAAAGAAGTTCGAGCAGGGCAAACAGCTTCGTTTTCAATGAAAAAGGT
ATTTTTTATTCTGAACACGTATCCAGAATTCTTGAATCGGTCTACGTTTT
GAGAGTTATATATTAAGTTTTATCGAACCATGCTTTGAGTCCTTATAGTT
GAGCATCTTACGCGAAGATATTTTTGTAACACACTAGTAGGTATATAGCA
TTGCACCGAGTAGTTCGAAATTATTACATTTTCTGATCAAATTGCCCCCG
TACTCTGACGTCCACTTGAATTTCAGTTCATTTTGTAACTTTACCTAACT
TGCTGTTTTGAAATAGCTTGTAAAGAATGACACTTTTTACTGTTTTTGTT
TTTCATCATTTTCAGATCAAACGACAAGACATTCGAAAAGGAATGGTACT
AGCGGGCCAAGATCTTGAACCACGTGCCACGTGGGAATTCGATGCGGACG
TGTTAGTACTACATCATCCAACCACCATCAGTGCGAAATATCAAGCTATG
GGTACGAGACATTCATTACTTTATCCACTTCAGATAATCCATTTATGGAT
ACTCATTTACTATACTTGAGCAACATGATTTTTTAGCTCAGAAGTTTGAA
GTAGAATTCGGATAGAAACCAAAAAATAGTTCAAAATGTATAATGTATAA
GGATAAAAGCTAAGGTTTTTGATTCATAGAGATGGGGTAACGTTCACTTC
TAGTATATACATCTTTCCTGTTTCTCGAATTTTATTCTCCTCCTTTTGAT
ACAGTTCATTGTGGAAGCTTACGCCAGACAGCGACCATCGTCCGAATGGA
TAAGGAACATCTGCGGACAGGTGACAAAGCCTCATGCCGTTTCCGGTTCA
TGAAATCTGCGGAGTACATAACTATCGGAACAAAGATGATATTCAGAGAA
GGGCGGACCAAAGCGGTAGGCACTATAACAAAATTACATGAGGAAGTTGC
AGGGCGTAGCACCCATAATACACGCCAAAATAAACAATTCAAAGCTCTCA
TGCACCAGCGTGGAAAGGGCGGTAATCGTAAAACTCCGGCGCAGAATAAG
CCGCCACAAGCAGCCGCAGCTGCAGCTACGGCGTCTGCGAAATAGCTGTT
CTGATTTTATTTTACACTCTTGCTCCTTTTTAGTATCTTTTTAAAATATT
TTATATTATATTTGCTAAGCTTTTATATTTTTTTTTTTGTGAAGAGTAGA
TTATTTTTTAGGTATTTTCTTGCTCATAGTCACAAGTGTGGCTTGTAGGT
GTTTTATTTACTTACTAGGTGTTGATTTTTGATATTCATGACTTGATATG
TCATCTTAAAACTCACTTAAAGGCATTGAAAATCGAATTTTTAACAAGTG
ATCTAGGTACGGTTTTTTAGGTCGTTCCTAAAAATATAGCTCTGGGGTCA
CATTTGCCGGATCTAGAACTTTCTATGATTGTTTATCTGTATTGTTCGAA
GGTCAGTACCTTTTATTCAGAGCTAATTACAACTAAAAGTTAACCCCTAC
ACAAAAAGGTTGAATATGAAAATTTGTTTTTGATTATCTTGTGTTTTATT
ATGTAGATATTTTATATCATAATAACTTGTGGTATTTTTAATTAAGGTAT
TTTTGTGATTTTTGTTGTTTTATGAAACAAAAAGACTACTAAAAACTGAA
ACTACACTCTTAGTAGTGAAAAAATCAATTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043652XLOC_043652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070114-exon-scaffold_513-1575043694:409831..409873TCONS_00070114-exon-scaffold_513-1575043694:409831..409873Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:405090..405304TCONS_00070114-exon-scaffold_513-1575043694:405090..405304Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:403726..403834TCONS_00070114-exon-scaffold_513-1575043694:403726..403834Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:402877..403057TCONS_00070114-exon-scaffold_513-1575043694:402877..403057Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:402100..402308TCONS_00070114-exon-scaffold_513-1575043694:402100..402308Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:401621..401797TCONS_00070114-exon-scaffold_513-1575043694:401621..401797Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:400338..400539TCONS_00070114-exon-scaffold_513-1575043694:400338..400539Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:399538..399682TCONS_00070114-exon-scaffold_513-1575043694:399538..399682Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:398826..399008TCONS_00070114-exon-scaffold_513-1575043694:398826..399008Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:398373..398508TCONS_00070114-exon-scaffold_513-1575043694:398373..398508Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1575043694:397190..398119TCONS_00070114-exon-scaffold_513-1575043694:397190..398119Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:409831..409873TCONS_00070114-exon-scaffold_513-1510915933:409831..409873Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:405090..405304TCONS_00070114-exon-scaffold_513-1510915933:405090..405304Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:403726..403834TCONS_00070114-exon-scaffold_513-1510915933:403726..403834Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:402877..403057TCONS_00070114-exon-scaffold_513-1510915933:402877..403057Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:402100..402308TCONS_00070114-exon-scaffold_513-1510915933:402100..402308Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:401621..401797TCONS_00070114-exon-scaffold_513-1510915933:401621..401797Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:400338..400539TCONS_00070114-exon-scaffold_513-1510915933:400338..400539Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:399538..399682TCONS_00070114-exon-scaffold_513-1510915933:399538..399682Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:398826..399008TCONS_00070114-exon-scaffold_513-1510915933:398826..399008Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:398373..398508TCONS_00070114-exon-scaffold_513-1510915933:398373..398508Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1510915933:397190..398119TCONS_00070114-exon-scaffold_513-1510915933:397190..398119Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:409831..409873TCONS_00070114-exon-scaffold_513-1491911889:409831..409873Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:405090..405304TCONS_00070114-exon-scaffold_513-1491911889:405090..405304Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:403726..403834TCONS_00070114-exon-scaffold_513-1491911889:403726..403834Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:402877..403057TCONS_00070114-exon-scaffold_513-1491911889:402877..403057Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:402100..402308TCONS_00070114-exon-scaffold_513-1491911889:402100..402308Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:401621..401797TCONS_00070114-exon-scaffold_513-1491911889:401621..401797Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:400338..400539TCONS_00070114-exon-scaffold_513-1491911889:400338..400539Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:399538..399682TCONS_00070114-exon-scaffold_513-1491911889:399538..399682Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:398826..399008TCONS_00070114-exon-scaffold_513-1491911889:398826..399008Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:398373..398508TCONS_00070114-exon-scaffold_513-1491911889:398373..398508Clytia hemisphaericaexon
TCONS_00070114-exon-scaffold_513-1491911889:397190..398119TCONS_00070114-exon-scaffold_513-1491911889:397190..398119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:397190..409873 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.4289	3.27927	0.697687	5.81293e-05	145.771	100.871	83.6388	88.466	66.7589	87.7748	43.3769	30.6312	19.7915	18.9691	21.5374	21.1234	45.0696	29.4777	10.3838	15.8775	19.5414	24.0583	17.3071	14.6009	18.2296	19.0666	20.9146	16.6469	13.5331	10.2239
Blast
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BLAST of TCONS_00070114 vs. Swiss-Prot (Human)
Match: GTPB1 (GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE=1 SV=3)

HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0
Identity = 369/560 (65.89%), Postives = 455/560 (81.25%), Query Frame = 1 
Query:  199 DEDDFENGDS--GHDQININSKFALVSPNASEYTCLVKKVQDLIEEGQGETIYEIGVDEKG-ESGLNDEDFKASIATLQSIAEQLNCQINMLREKDIETRKTAEFLIRGNLVEEDFSEVRVAVVGNVDAGKSTLLGVLTHGSLDDGRGTARLKLFRHKHEAETGRTSSVGNDILGFDSKGDIVNKPDKHSGALDWTQICKESSKVVTFIDLAGHEKYLKTTVFGMTGHAPDFAMLMVGSNAGIVGMTKEHLGLALALNVPVFVAVTKIDMCPPNVLQETMKLLCRILKSPGCRKIPVIVSNKDDVIVSATNFSSERICPIFQISNVTGENXXXXXXXXXXXSVRGQYVSSKPPLFQIDDTYXXXXXXXXXXXXXMQGVIRLNDILLLGPDSTGAFQPVPIKSIHRKRLPVKEVRAGQTASFSMKKIKRQDIRKGMVLAGQDLEPRATWEFDADVLVLHHPTTISAKYQAMVHCGSLRQTATIVRMDKEHLRTGDKASCRFRFMKSAEYITIGTKMIFREGRTKAVGTITKLHEEVAGRSTHNTRQNKQFKALMHQRGKGG 1869
            D D  E+G++  G  ++++ SK  LVSP + +Y  L++++ + ++EG GETIY IG    G E GL++ D +AS AT++S+AEQ+   + +LRE+     +  ++L+R  + + DF EVRVAVVGNVDAGKSTLLGVLTHG LD+GRG AR KLFRHKHE E+GRTSSVGNDILGFDS+G++VNKPD H G+L+WT+IC++S+KV+TFIDLAGHEKYLKTTVFGMTGH PDF MLMVGSNAGIVGMTKEHLGLALALNVPVFV VTKIDMCP N+LQET+KLL R+LKSPGCRKIPV+V +KDDVIV+A+NFSSER+CPIFQISNVTGENLDLLK FLNLLS R  Y   +P  FQIDDTYSV GVGTVVSGTT++G+I+LND LLLGPD  G F  + +KSIHRKR+PVKEVR GQTASF++KKIKR  IRKGMV+    L P+A+WEF+A++LVLHHPTTIS +YQAMVHCGS+RQTATI+ MDK+ LRTGDKA+  FRF+K+ EY+ I  +++FREGRTKAVGTITKL +     +T+N+  N + + +  Q  K G
Sbjct:   43 DSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQ-----TTNNSPMNSKPQQIKMQSTKKG 597
The following BLAST results are available for this feature:
BLAST of TCONS_00070114 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTPB10.000e+065.89GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE... [more]
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