TCONS_00070978 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00070978
Unique Name	TCONS_00070978
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3532

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_58:676583..690671-

transcript sequence

>TCONS_00070978 ID=TCONS_00070978|Name=TCONS_00070978|organism=Clytia hemisphaerica|type=transcript|length=3532bp
NGTCTGGTTTGTTGAAGAAGTTCATCATTGAACCATTCATCGAACATGAC
GAGAAAGAAGAGATGTATTTATGCATTTACACGCAAAGAGACGAAGATGT
GATTTTGTTCCACCACGAAGGAGGTATTGACATTGGAGATGTAGATTCAA
AAGCTTTGAAAATGACCATACCTATCGATGGAGAAACAAACACTGATGCC
ATCAAATCCACTCTCCTTTCCAATGTTGCACAAAGTGACCAAGACAGAGT
GGCTGGGTTTATTTTTTCGATCTTTGACCTCTACAAAGATTTGTTTTTCA
CCTACCTGGAGATCAATCCTCTTGTTGTTAAGACGGACAGTATTTATGTT
TTGGACCTCGCTGCAAAGATCGACCAAACGGCAGAATTTTTGTGCAGTGC
CAAATGGGGCAAGATTGGTTTCCCGCCACCATTTGGACGTGAAGCCTACC
CTgaaGAAGCGTTTATAGCAGAGTTGGACGCGAAGAGTGGAGCATCGTTG
AAATTAACAGTGTTGAATAAAGCAGGCCGTGTGTGGACCATGGTGGCTGG
AGGTGGCGCCTCCGTCGTCTACAGTGACACCATCGCAGATTTGGGAGGAG
GTGATGAAATGGCCAACTATGGAGAATACTCTGGTGCTCCAAGTGAAACA
CAGACCTTTGAATATGCaaaaactattttgaaattGATGACTGAAGGAGA
ACCACACCCTGATGgaaaagtttTAATCATCGGTGGAGGGATCGCCAACT
TCACCAATGTGTCCGCTACCTTCGCCGGTATCGTGAAAGCTCTGCAACTT
TACCAGCAAGAATTGATTCGCCACAAAGTGAAGATTTTCGTTCGTCGTGG
AGGTCCAAATTATCAAGAAGGACTGAGGATCATGAGGGAACTTGGAGCAA
CATTAGGAGTACCGATGCATGTTTTTGGCACAGAAACACACATGACAGCT
ATCGTGGGAATGGCTCTCGGGAAAACCGAAATTCCACGTACGTCAGTGTG
CGATTCGAATGATGCAGCAAGTAAAATGTTCTTCAATACATACGACGAAT
CAGCTCCAGCTTCAGGCAGTGGCACGCCCAAACGAAAAGCCAGCAATGAA
TTGACATCCAGTCAGGAGAGTGACAAAAAGAAACTTTGTAAAGCGAACAG
TGGAGACTTTGTGATGGTGCAACATTCAGAAACACCTCCCTCTGTTCTCT
TCACAAAAGACACAAAAGCCATCGTTTGGGGCCTTCAACACAGAGCTGTC
CAGGGGATGTTGGATTTTGATTACGTGTGCCAGCGAAAGGAGCCTTCAGT
CAAAGCTATGGTGTACCCTTTCAGTGGGAATCACAATCAAAAGTTTTATT
ATGGACACAAAGAAATCATGATCCCTGTTTTCAGTAAAATGGCGGTGGCG
GTAGAGAAGATTCCGGATGCTTCAGTGTTGGTGAACTTTGCTTCGTTGAG
GTCAGCATACGACGCCACTGTTGATGCTCTTCAATACCCTCAGTTCCGCA
CAGTAGCAATCATTGCTGAAGGAATTCCCGAGAGAATCACTCAACAATTG
AACAAAAAAGCCAAAGATAAAGGCGTTATCATCATTGGGCCGGCTACCGT
TGGAGGGATCAAGCCCGGTTGTTTCAAAATTGGAAACACTGGAGGAATGT
TGGACAACATTCTGGCTTCCAAGTTGTACAGACCAGGAAGCGTTGGTTAC
ATTTCTCGATCAGGAGGTTTATCCAACGAATTGAACAACATCATAGCGCG
CAACACGGATGGTGTCAATGAAGGTCTGGCTATCGGTGGTGACAGGTATC
CCGGTACGGTATTTATCGATCATTTTCTTCGATATGAAGCCAACCCCGAG
ATCAAGATGATGGTCTTACTCGGAGAGGTTGGTGGTAACGACGAGTACGA
AATTTGTCGCGCGATCAAAGACGGCCGCATCACGAAGCCAGTGGTCGGAT
GGTGTATTGGAACGTGTGCAAGTGTTTTGACGACAGAAGTCCAATTCGGA
CACGCCAACGCATGCGCAAACTCCTTCGCAGAAACGGCCGTCGCAAAAAA
TCAAGCTCTACGAGATGCAGGAGCTGCCGTGCCCGACTCTTTTAACGACC
TCGATAAAACAATCAAATCTGTTTACGAGAAGTTAGTCATGGATGGTACC
ATCGTCCCACGACCAGAAGTTCGCCCGCCCACCGTTCCTATGGATTACAG
TTGGGCTCAGgaATTGGGATTGATTCGAAAACCTTCGTCTTTCATTTCGG
CAATTTGTGACGAGAGAGGTCAAGAATTGTTGTATGCTGGTACCAAAATC
TCCGACGTCTTCAAGGATGACTTGGGAATCGGAGGTGTTCTCGGCTTGTT
ATGGTTCCAAAGGAGATTACCGAAATATGCATCTAAATTCATTGAGATGT
GTTTAATGATCACAGCTGACCATGGACCAGcgGTATCTGGCGCACATAAC
ACCATTGTAACATCCCGAGCTGGCAAAGATCTCATTTCGTCACTTTGCTC
CGGTTTGCTGACAATCGGTGATCGCTTTGGTGGAGCTTTGGATGGAGCAG
CCAAAATTTTCTCGGAGGCCTACGATTCAGGTACAGCGCCCATGGAGTTC
GTCAATTCAATGAGAAAGAAAGGAAAGCTCATCTTGGGTATTGGCCATAA
AATCAAATCGcTGAACAACCCTGACGCTCGCGTGGTGATCATGAAGAATt
atatgaaagaacatttccCACAGACAGACCTTTTGGATTACGCCCTGGAA
GTTGAACAAATCACAACATCAAAGaaacCGAATTTGATTTTGAACGTGGA
TGGGTGTATTGCCGTTGGGTTTGTTGACTTGCTGAGAAATTGTGGTTGCT
TTACGAGgtctgAAGCAGATGAATACGTGCAAAATGGTGCGCTCAACGGA
TTGTTTGTTTTGGGACGTTCTGTCGGCTTCATCGGTCACCACTTGGACCA
GAAACGTCTGAAGCAAGGTTTATACAGACATCCTTGGGATGACATCTCAT
ACATTATCCCTGAAAGTGCTCAAGCTCCTTTCGAATGAGaacaaaatagt
ttttttaactttaccGACCAATTGAATTCTTagatatatttttatttatt
atttactcgtattatttgtaattttttaaatttttcctgttttgtCGAAA
ATGCCTTTTTGAGACGTGACAAACGGCGGCGTGATTTCTGCTTTCGATTA
TTAGACGTTGGTGTAGGTGAATTTTTAACCCTTAAAtttaaataatttgt
aaaaCCGAATTTTGAACTAAAATAAATAACTTGATCAAAATATAATGATT
GATAAAAACGAAGCGAAACTCGACAGAACTTGCTTACCGTCTTAAAGCAA
GGATATTTGAGGCCCTCTAATCCTCTCCCCCTTCTTTCTGTTCTCGAAAC
ACGTCGAAAGGGATTAATATTTCGAAATATTCTCCGAGCTGTGGATTACT
TCTTTCTCAATCTTCCATTTCTTGTTTTTCATCTTTTagagaacaaaaaa
agaaaactcaaattttcctTCTTCGAACACGA

Run BLAST on NCBI

transcript from alignment at scaffold_58:676583..690671-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00070978 ID=TCONS_00070978|Name=TCONS_00070978|organism=Clytia hemisphaerica|type=transcript|length=14089bp|location=Sequence derived from alignment at scaffold_58:676583..690671- (Clytia hemisphaerica)
NGTCTGGTTTGTTGAAGAAGTTCATCATTGAACCATTCATCGAACATGAC
GAGGTAAGAGTACTTTTCATAACATACCTTTTATTATCTTGGTGCTTTTG
CTGCACTGAGGAAGATTCATTTGATTGCAGCCAAAAAGTCTTGCGCTGAT
AAAAAGACATTATTTTCTCTCTTTAGAAAGAAGAGATGTATTTATGCATT
TACACGCAAAGAGACGAAGATGTGATTTTGTTCCACCACGAAGGAGGTAT
TGACATTGGAGATGTAGATTCAAAAGTGAGCAGATTTACTTAAACTTCCT
TAATGGAGATTTTAGCAAGGACTCGTTTGACAATTCACCAAGATTCATTT
ACTTTCTACGTATATCTTTATATTACCGAGTTTATGTATGTGTGTTTTTC
TGCGTCGGAGACGGTGTTATGCGCAGATATGTAATTTTTGCGTAGATATG
TAATTTCTGCGCATATATGTAATTACTTTGCGCAGATATGTAATTTCGAG
CTGCGCAGATATGTAATTAAATTTCTGCGCAGATATGTAAAACACGACCT
TAGTTATTTTTTGAAAAACTGTCTCGATTTTAACATTAATTTTTCAAAGT
ATTTAATCGCATTGTTCTTGGACTATGACAGACATTTGGCGATTGTTGTT
TTTCTTATAAGCATCATCTTTTAAGAAGCAAGTCAATATCTTTTTATCAA
AGTGATATTGGCTTTCGGCGATTGGTTCTATCAAAGCAACTAGGGGACAG
TGCTAAGTGACTTATAAGCATCAACTTTATAAGAACACAATTCATAACTC
TTAAACCAATAGATAATAGCTTTTGGTGTTTGGTTTTCGAATACAAACAT
AGGATAGTGCTTAAGCTAGAAATTCTTTTTTTCTTATAAGCATTAACTTT
ATAAGAACACAATTCATAACTCTTAAGCCAATGATTATTAGCTTTTGGCG
TTTGGTTCTTTCAAAGCAAATATAGGATAGTGCTTAAGCTAGAAATTCTT
TTTTTCTTATAAGCATTGACTTTATAAGAACACAATTCATAACTCTTAAA
CCAATGATTATTAGCTTTCGGCGATTGGCTCTATAAGCAACGAGGGGACT
GTGCTAAATCAGAAAATTTTGTTTTTCTTATAAAGAACACAATTCATAAT
TCTCCAAACAATAGATATTAGCTTTCGGTGATTGGTTCTTTCAAAGCAAA
CATAGGATTGTGCCTAAAAAAGAAACATTTATTTTTCTCATAAGCATCAA
CTTTATAAAAACACCATTCATAACTCTTAAACCAATGATTATTAGCTTTC
GGTGATTGGTTCTTTCAAAGCAAACATAGGATTGTGCCCAAAAGAGAAAC
ATTTATTTTTCTTATAAGCAACATTTTATAAGAACACAATTCATAACTTT
TAAACAATATTTGTTAGCTATTGTTTGATAAATCAGATCTCTGAAAGCCT
ATTCCACTTAGAAAAAAACCCTTGTTCTTATAAAATTCTTATTAATTAAT
GTTAGATTTAGGAAAATTCCCTATTTCTTTCGATAGAGCCGTTGTAGAAT
GCCAATTCCACTTAGAAAAAAAAATAATTCGTCTCCTTTTAGATAGCTTA
AAGTTGAATATTTTGCCTTAGTTTAATTTGTAAGAGGGAAATAAAAAAGG
CACGTTTTTTTAATATCTTTAACAATCAGTGTCAATAATCCCACTCTATT
TCATTGTATAATTCAATCAAATATAATGACTTTGCTCGTAGATCGAACCA
TGAAAAGGAAGTTTTTTTATCATAAATTAGTCCATGTTTTGGTAGAGACA
ACCAATAGATATTTACTTTATCTCACTGTAATTTAAAGAAATGCAATCCA
TATCTACAAAATCAATAAAGTTTACATAGATATGTCGAATTATCGAAGAT
CTCATTATATTGTACTTNTCTACAAAATCAATAAAGTTTACATAGATGCG
AGAACTCGAGTCGAGGTTTATCGAAGATCTCATTATATTGTACTTTTTTA
TTAGGTTGTACCGATAAGATAAATAGAAAATCCGAATCTTTTGCTTATAC
CTTGCTAGATGGTTCGCATTTTTTAAAAGAATTTGGATACTCTTTTTTTT
TTTAGGTTTCAGCCTAAAGATATTCTTAACATGTTCAGCCTTGTTAACTT
TGTAATAACTACCGTATTTTTTCGAATAAACGCCCTGGGCGTCTTTTTGA
TTTTAAGACTTTCAGGAGGGGTGTTTATTCGAGGGTATATACCATTCTAC
CAAGAGTTATTTGATTCTCATAAAGTAGTTACTTATAGGAAGAATTACTA
TGCTCATAATATTATACGCCTTCCCTTGTTTAATTTGTAAGAACTAAATA
CTGAAAGGTATATGACCATCTATGAAAACTATCGATTTATTCTTATAAAA
TAGGTGCTTATAAGAAAAATAAATATGCTCATCTTATATGCGCCGCTCCT
TGTTTACTTCGTAAGAACTAATTACCGAAGGGTATATCACCGTCTATTAA
GAGTTATTAATTTAGTTCTTATAAAGTATATGCTTATAAGAAAAATGAAT
ATGCTCATATTATGCGTCATCCCTTATTTACTTTGAAAGAACTAATTACC
GAAAAGTATATGACCGTCTATCAAGAAAAATTGCTTTGATTCTTATAAAG
TAGTTGCTTATAAGAAAAATTATAATGCTCATATTATGTGCCATCCCTTA
TTTACTTTGTAAAAACTAATAACCGAAGGGTAAATGACCGTCTATCAAGA
ATTATTGATTTGATTCTTATAAAGTAGTTGCTTATAAGAAAAATGATAAT
GCTCATATTATGTGCCATCCCTTATTTACTTTGTAAAAACTAACAACCGA
AGGATATATCTCAGTCTATCAAGAGTTATTAATTTGATTCTTATGAAGTA
TATGCTTATAAGAAAAATGAATATACTCATATTATGTGCCGTCCCTTGTT
TACTTTGTAAGAACTAATTACCGAAAGGTATTATGGCCGTCTATCAAGAG
TTATTGCTTTGATTCTTATAAAGATGATGCTTACAAGAAAAATAGTCATA
TTCATTTTAGGCGCTATTCCATGTTTGCTTTGAAAGAACCAATCACCGAA
AGCTAAAACTTAGTGGTTGAAAAGTTATAGATCATTTTCTTATAAAGATG
ATGCTTAAAAGAAAAATAATTATTTTCATTTAAGGCCCTCTTCTATTCCA
TTCAAAAGTTATGGATATTTTTCTTATAAAGTTGATGCTTACAAGATATT
GCTTCTTGTATTTGATACCCTAAAATACCTAAGTCTTAAAAAGGTAAAAG
TAATGGTAAAAATCTATCAAGGGGGTACCATTGATTTTAAAGATCGTCTT
TTACATATCTGCGCAGAAATTTAATTACATATCTGCGCAGCTCGAAATTA
CATAGTTGCGCAAAATAATTACATATTTGCGCAGAAATTACATATCTACG
CAAAAATTACATATCTGCGCAGCTCGAAATTACATAGTTGCGCAAAATAA
TTACATATTTGCGCAGAAATTACATATCTACGCAAAAATTACATATCTGC
GCACAACAACGGTAAGGTTCTAACTTTTCTACATCCTGACTGACTGAGGA
CGACGGTAAGTCAACACTTTTACCCTTGGCAAAATTGCAAATACATCAAC
TTGCTATTTGATTGCAAAGGGAAGCTCTTTACAAATAGTATGCATTCTTT
TTACCATTCCCCACAACAGGCTTTGAAAATGACCATACCTATCGATGGAG
AAACAAACACTGATGCCATCAAATCCACTCTCCTTTCCAATGTTGCACAA
AGTGACCAAGACAGAGTGGCTGGGTTTATTTTTTCGATCTTTGACCTCTA
CAAAGATTTGTTTTTCACCTACCTGGAGATCAATCCTCTTGTTGTTAAGA
CGGACAGTATTTATGTTTTGGACCTCGCTGCAAAGATCGACCAAACGGCA
GAATTTTTGTGCAGTGCCAAATGGGGCAAGATTGGTTTCCCGCCACCATT
TGGACGTGAAGCCTACCCTGAAGTGAGTTTTTTTTTTTTTTTTTGGCTAT
CAATTCGATTTTCAAAATCCCAAGTTTCATATTTGGTTGTTATATAAACC
CCTTTTTCTAACTTTTGCACTTTTGTTTGTTTCAGGAAGCGTTTATAGCA
GAGTTGGACGCGAAGAGTGGAGCATCGTTGAAATTAACAGTGTTGAATAA
AGCAGGCCGTGTGTGGACCATGGTGGCTGGAGGTGGCGCCTCCGTCGTCT
ACAGGTCAGTCACCTTTACCAAAACAAATTTTAACCCTGTAACTTGCTAG
TCAACCCATGAGTATTTTGTCGAAATTATTTTTACTTAAAATCAAGGTCA
ACACTTCCCGGGTAAGACAATGAAATCTATTTTATAAGTTTGATTATTTG
AAACCATACGAAGCCTAATCTCTTCTTTACAGTGACACCATCGCAGATTT
GGGAGGAGGTGATGAAATGGCCAACTATGGAGAATACTCTGGTGCTCCAA
GTGAAACACAGACCTTTGAATATGCAAAAACTATTTTGAAATTGATGACT
GAAGGAGAACCACACCCTGATGGTGAGATTACTTCATCTACCCGTTCAGA
CCTAAATTGTGCCGGGTTCTCAGAATTTTACATAACCTGCTTCCTCGAAA
GCCAATTTTTAATCTTAAGATTTGTAACAGAGGTGTATTCAGGTGTATTG
TGTATTTCGGTAAGAAAGATTGTTACTTCTTATGTGGTCATCTAAAACGT
GAACTGATGGAATACTTGAACTCTCTTCATTTCATGGGTCCATCGTAAGA
AGCTCTCTGTTATTGTGAGTAAGGTCTTTGTGAAATTATCGTGTTTTTCA
AATGGAAAACTTTTTATTTTTCAGGAAAAGTTTTAATCATCGGTGGAGGG
ATCGCCAACTTCACCAATGTGTCCGCTACCTTCGCCGTAAGTTCCTTGTA
TCTTATGTTCACTAATATTTTGTATTATAATGTCTTGTGAGTAAATGGAC
CTAATATTCCAACAGATCCATTCTGCGCATACCACGCTCTCGCTCTGCTC
TAAAGGGATGTGGTGAATGTGATAATCTTACCTGGTTGTCCAGCTAAAAC
ATTCAAAGCTGCGTTGCTTTTTTCTTGAAAACGAAAGCGATCAAGCAACT
AGAGTGTTTATTTATTGTTTTTGTACATGATTGATAGTTGATTCTGGTGC
CTTGGTTTTTTGCTTCAGCTCAAAAGCTAATTTAATATTCGTCCCAAATC
TAGATGAAAAAAATCAAAGTGGTGCACCATCCAGAGCGAATTCTCTTACG
GAGCCATGGCATTTAGAGAGAATATGTGTCATGCTTGGAGTATCGAAATC
TGCTAGGAGATAACATGACTTTTAGACCATATTCAGACGTTACGGCTTCG
TATCGCTCTGGTATGGTTTTCGCTACAGATAGGAAGTGTTCATACTGATT
TTGGAACGTTTCGGAGCAACGGAACGGAGGAGTTTTGTTCCGATGAAAAA
AGTGGAGCGAAACTGTTTCGATACGTTTTGCTTTGTAACGTCTTCTTTTG
ACGTTCCGAATTTTGACACTCACACTTGTTTTGGAAACATTTCGTTTCGG
AACGATACGGATCTGTAACGTCTGAACATGGTCTAAATTCTTAATGTTTA
TTTCCAGGGTATCGTGAAAGCTCTGCAACTTTACCAGCAAGAATTGATTC
GCCACAAAGTGAAGATTTTCGTTCGTCGTGGAGGTCCAAATTATCAAGAA
GGACTGAGGATCATGAGGGAACTTGGTAAGGTCCCCTTTCTCGAAAACAA
CAACAACCATGCTCCTTCTTGCAGGGATAGTCACATGAAATCAGTTCTTT
TAGACGTTTCGTTGTTCTTAGGTCCGACTCATTCATTACTCAAACCTTCA
TCTGTTTCTTCTTTGCAGGAGCAACATTAGGAGTACCGATGCATGTTTTT
GGCACAGAAACACACATGACAGCTATCGTGGGAATGGCTCTCGGGAAAAC
CGAAATTCCACGTACGTCAGTGTGCGATTCGAATGATGCAGCAAGTAAAA
TGTTCTTCAATACATACGACGTAAGGCTTTATTTTATCCCGTTGTCTAAT
TTCGGCTCTCAAAGAAAGTGTACTTTGTTACCTTATATGGAAATATGATA
AAGTAGAGCTTGCAAAGATTGACTCATACAGAATTATACAGAACTCTCAA
AAATATTTTGCTATGAAATTCATGTTTATTTTTCTCTGAACAGGAATCAG
CTCCAGCTTCAGGCAGTGGCACGCCCAAACGAAAAGCCAGCAATGAATTG
ACATCCAGTCAGGAGAGTGACAAAAAGAAACTTTGTAAAGCGAACAGTGG
AGACTTTGTGATGGTGCAACATTCAGAAACACCTCCCTCTGTTCTCTTCA
CAAAAGACACAAAAGCCATCGTTTGGGGCCTTCAACACAGAGCTGTCCAG
GTATGGTGAATATTACTTTGCTGTTTCAGCCATTCTATGATGAATACATT
TATCTTTCATGTGACGTTTCTTTGGTTTTAGGGGATGTTGGATTTTGATT
ACGTGTGCCAGCGAAAGGAGCCTTCAGTCAAAGCTATGGTGTACCCTTTC
AGTGGGAATCACAATCAAAAGTTTTATTATGGACACAAAGAAATCATGAT
CCCTGGTATTAAACCTTTGTCCTGACTGATTTTTTTTAAATATAGATAAA
AACATTATTCAGTTTTATCATTGACGACCCTAGAATGCATTTTCACTGCA
ATTGATTTCGATAGATTCACCTTTTTAAAGATTTCCCTTCAATTGCCAAC
GCCTTGCTTGTTCAGTTTTCAGTAAAATGGCGGTGGCGGTAGAGAAGATT
CCGGATGCTTCAGTGTTGGTGAACTTTGCTTCGTTGAGGTCAGCATACGA
CGCCACTGTTGATGCTCTTCAATACCCTCAGGTAAGAAAGACAATTTCTT
TTTGAATACCACTCATTTATCATCTTTTGTCTAAACTGTATTTAATTTTT
CCCTCTTAAAAATAAGTAATGAAATTGTATCGGGTCAAGAAATCGTGGAC
TGACCATATTTGATTTGTTTTCAGTTCCGCACAGTAGCAATCATTGCTGA
AGGAATTCCCGAGAGAATCACTCAACAATTGAACAAAAAAGCCAAAGATA
AAGGCGTTATCATCATTGGGCCGGCTACCGTAAGTTTACTAAGATAGTTG
TGATGTGTTTCAAAACAAAAGAACCAAATGAAATTATTATATAGCGGAAA
ATAAATTCGTTACTTTCTTCATCCATTAGGTTGGAGGGATCAAGCCCGGT
TGTTTCAAAATTGGAAACACTGGAGGAATGTTGGACAACATTCTGGCTTC
CAAGTTGTACAGACCAGGAAGGTAAATTATGGACATTGTAAAAGAAGTAT
TTAATCGATTTCAAATCGATCTCAAATTATCTCGTTCATGTCTTGAACGT
GTGACCATACATAAAGAATGAAATGTCTGACGATAACATGTTTCACAAAT
GGTGTACCATTCTCTAAACGTCATCACTTGTTATGCAAAGCTGCACATAA
CATTGTATTTTTTTCACCCTCAGCGTTGGTTACATTTCTCGATCAGGAGG
TTTATCCAACGAATTGAACAACATCATAGCGCGCAACACGGATGGTGTCA
ATGAAGGTCTGGCTATCGGTGGTGACAGGTGACAACGCATTCCAATTCCT
CCATTTTTACAATGGCTTATTTATATTATCAATAGTAGGGGCCATTCTTT
TGGACCCGTGACAACGATTTCCGAAGTCCCCTTTTTTTGAGAGGGGAGTA
ATCAATTCTTTTCATGGGCAAAAGACTGACGTCACGAGCAAAAAACCTTA
GGATCTGAAATTTGACGAAAATTCAAAGTCGCTAAAACCTAAAACCCCTT
ATACTATTTAATTGAAAACGTTTCGATACGATATAGTGGACTTATAAGGG
GATAATAGTCGATTTCTCAACGTTACTCGAGAAAAACGGCGTCAAAGTGA
CGTTTGCCTAAATGTTTGGCGTTCATTTTCTTGAGTTATAACTACAAGTA
ATTGAACTTTTTTATATCTTTGTTCTTGTTTTACTTATTTAGGTATCCCG
GTACGGTATTTATCGATCATTTTCTTCGATATGAAGCCAACCCCGAGATC
AAGATGATGGTCTTACTCGGAGAGGTAATGAATTTTAAATAGATTCTCGA
TAAAGGATGAATCAATGTTTTGAGATTCTCTTACATTATAAAGCCATTTA
ACCGTTGGCCACCTCTCCCACCCTCACTGTTTAAGCGGCATTTTGAGTGA
GAGAAGAGTACTTCCAAAGTGAAGTCATATCCGAAAGTAGAACAGCAAAA
TAAAGTGTCTGAACTTTTCCATTTTTTCAAGGTTGGTGGTAACGACGAGT
ACGAAATTTGTCGCGCGATCAAAGACGGCCGCATCACGAAGCCAGTGGTC
GGATGGTGTATTGGAACGTGTGCAAGTGTTTTGACGACAGAAGTCCAATT
CGGACACGCCAACGCATGCGCAAACTCCTTCGCAGAAACGGCCGTCGCAA
AAAATCAAGCTCTACGAGATGCAGGAGCTGCCGTGCCCGACTCTTTTAAC
GACCTCGATAAAACAATCAAGTATGTTTTCATCTTTTTTTGAATTTCATA
CTTTTTTCGAACAATGCTTATTTCAAAAAGTTTTCCATCCATCATAATTC
AGTGCAATGAAGAATGAATCTTCTATATAGGGTTTCTTTATATTCTTTAG
ATCTGTTTACGAGAAGTTAGTCATGGATGGTACCATCGTCCCACGACCAG
AAGTTCGCCCGCCCACCGTTCCTATGGATTACAGTTGGGCTCAGGTAAGA
CTATTAATTAACGCAGTTTTCATTAAACTGCCATTTTCATCAAATTTTGT
AATGGTTAATTCTATTTTTTTTTCATAGGAATTGGGATTGATTCGAAAAC
CTTCGTCTTTCATTTCGGCAATTTGTGACGAGAGAGGTCAAGAATTGTTG
TATGCTGGTACCAAAATCTCCGACGTCTTCAAGGTAATTCATCTAGGAAG
AAATTTTTGTCAGGCTATGAATAAATCAAACCAATGTAAAAAGGCAAATA
ACTCCTTAGTTTTTGAATAAAGCATTATTAGGCAAACATTTTCTTTGGAT
AACTTTGAACAGGATGACTTGGGAATCGGAGGTGTTCTCGGCTTGTTATG
GTTCCAAAGGAGATTACCGAAATATGCATCTAAATTCATTGAGATGTGTT
TAATGATCACAGCTGACCATGGACCAGGTTCGTTTCTTTACCATCTTCCT
ATACATACTCCCTTCTTTTATTACGCACGAGCGAGCGCAGCGAGCGAGTG
CGATTCTTTTGGCAAAAGCGCGGGAAAAAAAAGCTGATATGCGGGGTGAT
AAAATCGATTTTTCAGCTTTTTTAGCCTCGTTTCCATTCAGACTTTCGTC
GTCGTGTGCCAGTTAAGTCCGAACATGGAGAATTGTCAGTTACACCCGAC
TGTCTGTTGGAAGCATACGTAATGGATTTTTTCCAAATCTCTTTTTAAAT
CGAGCTCCGGCGTGAAAAACAGTAGGGTGTTTTTTATACGACGATGAAGA
CGTCATTTCTTTGAGAAACGTCGCGAGAAAATATAAGTATCCTTCTCGAT
CGGGAAACGTCGCCCGGTTCGGAAGCGTATTGTTGATCGGGCCATACTGC
TTTCTAACAGTCAAAACAAAGATGGCGGCAAAAATAAACAACTGGTTGCT
ACTGCTCTTTCGCTATTTTTCTTTGGTTTTTATGCTTTAATGAGTTGAAT
TGGATCATGATTTTTGTGTAATTGTTACAAGAAAGGTTGATGATGAAGTT
TTCTTATTATTCCTTCCTGGATTTGATGTTTCGTTTGGATTGGCATGAGA
GATTGATGCAATCTCTTGAAAAACAGGGACATTTTTATCAACTTTCACAA
CAACAAACTAACTTCAATTTTGCCCGTATATTTACACAAATTCTAACAAG
GCAGGTGACTGAATATTTGTGGATAAATCTGACCATGCTATATTTACTAT
ATTTAAAAATTAAATACTTGCAACATCAAAAAAGTTTGAACTCACTTTTT
TATGATGGTCAGAGATGGTAGATGCAGCACTCAAGGAAATGGTTGTGGTT
GGATATGAACTGGTTAGCTTTAATGTAAAAATTTAAACCCGGACCAAAAT
TTACTGATTGGTGATTGAATTTCCCTTGGTGTTNNNNGTGGAAACTTTTG
CTGTGAATTTGGACATTTCCTTCCACATGCATTTTAAACGTGGAAAACCT
TTGGTTGTGAATTTGGACATTTTCTTCCACGTGTGTTTAAAACGAGGAAA
TTTTTGCTGTGAATTTGGACATTTTCTACCACGTGCTTTTAAAACGTGGA
AATTTTTGCTGTGAATTTGGACATTTTCTTCCCCGTGCGTTTAAAATGTC
GAAAACTTTTGTTGTGAACTTGACATTTTCTTCCACATGCAAAAAAATGT
AATAGTAGAAAAGTTTTCATGCAGCCGGCCGCCAGAAAAAACATTTTTAT
TTGATTTTTTTGATGACTTAAGTATATAATATAATAAGATCATTGAAATA
GAACTTTAAAGATGACTTTTTTTCTTTTTGGAAATTATGATTGCCAATTA
TGTGACATTTTTTGCTTTTGCAGCATACTTTTGAAAATTATGAAATGCCT
TTTGCTAGGGGAATTTTTTCCTTTCGACGTTCTTTCAGATTATGAAAATG
TTTCCCAGTATATATGAGATTTTTTTTTCTTCTTTTTTGCATTACCCTTT
TTTTTATATAAGAACCAGTAAAATTTTTCTGAGCCTCGGCTGTTCTTTTT
TTTTTTTTTTGCCCTTTGGGTTTTTTTTTTTTTTTTTTTTTTTCCCTTTT
TTTTTAAAAAAAACCCAAAAAATTTTTTTCCCCCCCCCCTCTTTTTTTTT
TTTTTTTTTTGCACTTTGAGCCTCTATCATGTTTTTATTAATAGGATGTA
AGTGAGGTGTTTTAGGCATTATACCCAATTTTTATTACTTTGACCCTTAA
ATTGCTTGAAATTGAGTAGTTTAGTTTCAGGCTCAGCATTGTCCTATTTT
TTGTCCTATTTTTTGGCGATTTTGAGCCTCGTTGTTCTTATAAAATTGTT
CTTATATTAAAAAAAGTGTATGTTTGAAATTTTGAAATTGTTTCCCTGTT
TTGAAAGTTTTTAACTTTTTGACATGCATTTCAAAAAATATAACTTTTGG
ATGCTACAATATTTTATATATTTTACCTTTTCTCCAATATTTTATATAAT
AAACCTTTTTTCCAATATTTTATAATATGAAAGTATATGCAAAATATTTC
ATCTATTTTGAAAATATAAATTTTCCTTTGGTTTTCTTATTGTAAAATAT
TCTCAATTTTTGATGAACAAGATCAATTTTTGTAGATATGCATTACCCCC
TGATTTAACAAAACGAGAAAAGAGAAAAAGACGGAACGAAATTCTGTTAC
TTTGCGCAAAGAATCATAAGACATTTTTTATACCAAAAAATCCTTATTAT
GTTCTTATTTTAGGTCGAAATTTTAAGATGTTTGAGTTAAAAAAACTTCA
AAAAAGCAGTTTGATTTGAGAATAGAATATCAACTTTCTTTTGGTTCACC
AGAGTTTGTACATGTTTAAAATGCATTGATAGAAATTTTCCTTGCTCTCG
TGACGATCATTAAAATTACATGGTTTGTTCACCATGCAAGTATCGCGAAA
ATAGCCCAAATCATGCCTCAAATTATTTCCCGATCACGCATCACGCAAAC
GGCTGGGTATAAGTTTTTAAAATTGTATCATAAATTTGGCTAACTTTCTC
ATTCCCGGAAAAACATACCTGCCCCATCTCCGGGATCTTCTAGGCGTCTC
CGGCAAAAATCGGTCTTAAATCTACTTTCGTGGCGTTTTGGTCCTTTTCC
GTTGTACACAGCAATCGGAAAGTTTCGCTGGGAATAAGAAAGTTTAGCAA
TCCCACGATATGTAGTGTAAAAAACCTTTCGCTTGCGAACACGAGATTTT
CGTATCGTGCGTAACCCCTTTTACAATTGATTTTTTCAAGATTTGTCCCC
ACACATCACAAACTCTCCTTACTCATTTTCAAGATCAGCAATTCAACTTT
GTCACGATGTTAAGAGCCTGTTTTTCTTTTTTCAGCGGTATCTGGCGCAC
ATAACACCATTGTAACATCCCGAGCTGGCAAAGATCTCATTTCGTCACTT
TGCTCCGGTTTGCTGACAATCGTAAGTTTCAACTCTTCTTTCTCTCGCGC
AGTATTTGTTCCATTCACCGCTCTTCATTTGCTCCAATGCATATGTCAAT
TCAATTCTTATAATGCAATGTACCTTGGTCAAGCATAGGTTTCAACCAAT
GGTCAATTGTATTCAGATGGCCATCATATCTTGCGCTTTATTGTTTCATG
TTAACCACAGGGTGATCGCTTTGGTGGAGCTTTGGATGGAGCAGCCAAAA
TTTTCTCGGAGGCCTACGATTCAGGTACAGCGCCCATGGAGTTCGTCAAT
TCAATGAGAAAGAAAGGAAAGCTCATCTTGGGTATTGGCCATAAAATCAA
ATCGGTAAATTGTACACTATTTTGTTTGATGTGTCGTGTCGTCAGTTCGT
AAAGTTTCCAGATACCTCTTCAACCTCTCAATTTGCGCATCTGAATTAGC
AATTATTATTTTATCAAATTTGAAAGTTTTCCCTTTTGTTTTGTTTCAGC
TGAACAACCCTGACGCTCGCGTGGTGATCATGAAGAATTATATGAAAGAA
CATTTCCCACAGACAGACCTTTTGGATTACGCCCTGGAAGTTGAACAAAT
CACAACATCAAAGGTTCGTCGCCTCTCCAAGGGGTGAATGTAAAAAGGAT
GTTCTGTGAGAGAAAGAATCTATTTTCAATGAAATCTTGCACTTTTTTAC
CCCAAGAAACTAAGTGATCTTCACTTACTTTTTTTTATCGATTTGATCAC
ACTTATGAGAGATTCTACTTTTAGACCCTCTTTACTTAGAGGTTCACCTT
TTACACCTCAACAAATATTTTTCTCTCTTTTCTTTTCAGAAACCGAATTT
GATTTTGAACGTGGATGGGTGTATTGCCGTTGGGTTTGTTGACTTGCTGA
GAAATTGTGGTTGCTTTACGAGGTACTAGTATGTCAGTATGTGGAGGGGT
CAATCATTCTGTTTGGAGAAGATTTCGGTATGCTAACTAAGCTTTTTACT
ACTGTAAGCTATTAGCAATCCTTTTTCATCTCTTTTGATTTTTTTTTTCA
GGTCTGAAGCAGATGAATACGTGCAAAATGGTGCGCTCAACGGATTGTTT
GTTTTGGGACGTTCTGTCGGCTTCATCGGTTAGTTGTTCTTTTTTATTCC
TCCTCATTATGACAAACGCTCAGTTAATCATTCAGAAAACAGCTTCTCGC
TATTATACACTGTCAACCAAACTTCCCCTTTAATTCTTCAGGTCACCACT
TGGACCAGAAACGTCTGAAGCAAGGTTTATACAGACATCCTTGGGATGAC
ATCTCATACATTATCCCTGAAAGTGCTCAAGCTCCTTTCGAATGAGAACA
AAATAGTTTTTTTAACTTTACCGACCAATTGAATTCTTAGATATATTTTT
ATTTATTATTTACTCGTATTATTTGTAATTTTTTAAATTTTTCCTGTTTT
GTCGAAAATGCCTTTTTGAGACGTGACAAACGGCGGCGTGATTTCTGCTT
TCGATTATTAGACGTTGGTGTAGGTGAATTTTTAACCCTTAAATTTAAAT
AATTTGTAAAACCGAATTTTGAACTAAAATAAATAACTTGATCAAAATAT
AATGATTGATAAAAACGAAGCGAAACTCGACAGAACTTGCTTACCGTCTT
AAAGCAAGGATATTTGAGGCCCTCTAATCCTCTCCCCCTTCTTTCTGTTC
TCGAAACACGTCGAAAGGGATTAATATTTCGAAATATTCTCCGAGCTGTG
GATTACTTCTTTCTCAATCTTCCATTTCTTGTTTTTCATCTTTTAGAGAA
CAAAAAAAGAAAACTCAAATTTTCCTTCTTCGAACACGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044115	XLOC_044115	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_58	supercontig	scaffold_58:676583..690671 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.095	1.37033	11.5538	8.15154	1.4705e-06	1.18747e-07	1.37881e-06	4.41521e-08	25.9376	25.0333	1.12949	13.4855	8.25371	16.8443	18.3024	24.6649	27.5047	20.3154	10.2266	6.13542	0.0661266	0.000114186	5.64118	4.03435	7.54448e-09	0.000569997	5.57383	3.24306	5.26418	0.001164

Blast

[Close]

BLAST of TCONS_00070978 vs. Swiss-Prot (Human)
Match: ACLY (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 1383.24 bits (3579), Expect = 0.000e+0
Identity = 686/1011 (67.85%), Postives = 826/1011 (81.70%), Query Frame = 3

Query:    3 SGLLKKFIIEPFIEHDEKEEMYLCIYTQRDEDVILFHHEGGIDIGDVDSKALKMTIPIDGETNTDAIKSTLLSNVAQSDQDRVAGFIFSIFDLYKDLFFTYLEINPLVVKTDSIYVLDLAAKIDQTAEFLCSAKWGKIGFPPPFGREAYPEEAFIAELDAKSGASLKLTVLNKAGRVWTMVAGGGASVVYSDTIADLGGGDEMANYGEYSGAPSETQTFEYAKTILKLMTEGEPHPDGKVLIIGGGIANFTNVSATFAGIVKALQLYQQELIRHKVKIFVRRGGPNYQEGLRIMRELGATLGVPMHVFGTETHMTAIVGMALGKTEIPRTSVCDSNDAASKMFFNTYDESAPASGSGTPKRKASNELTSSQESDKKKLCKANSGDFVMVQHSETPP-------SVLFTKDTKAIVWGLQHRAVQGMLDFDYVCQRKEPSVKAMVYPFSGNHNQKFYYGHKEIMIPVFSKMAVAVEKIPDASVLVNFASLRSAYDATVDALQYPQFRTVAIIAEGIPERITQQLNKKAKDKGVIIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVGYISRSGGLSNELNNIIARNTDGVNEGLAIGGDRYPGTVFIDHFLRYEANPEIKMMVLLGEVGGNDEYEICRAIKDGRITKPVVGWCIGTCASVLTTEVQFGHANACANSFAETAVAKNQALRDAGAAVPDSFNDLDKTIKSVYEKLVMDGTIXXXXXXXXXXXXMDYSWAQELGLIRKPSSFISAICDERGQELLYAGTKISDVFKDDXXXXXXXXXXWFQRRLPKYASKFIEMCLMITADHGPAVSGAHNTIVTSRAGKDLISSLCSGLLTIGDRFGGALDGAAKIFSEAYDSGTAPMEFVNSMRXXXXXXXXXXXXXXXXNNPDARVVIMKNYMKEHFPQTDLLDYALEVEQITTSKKPNLILNVDGCIAVGFVDLLRNCGCFTRSEADEYVQNGALNGLFVLGRSVGFIGHHLDQKRLKQGLYRHPWDDISYIIPE 3014
            +G LK F+IEPF+ H + EE Y+CIY  R+ D +LFHHEGG+D+GDVD+KA K+ + +D + N + IK  LL +  +  ++ +A FI  +F+ Y+DL+FTYLEINPLVV  D +YVLDLAAK+D TA+++C  KWG I FPPPFGREAYPEEA+IA+LDAKSGASLKLT+LN  GR+WTMVAGGGASVVYSDTI DLGG +E+ANYGEYSGAPSE QT++YAKTIL LMT  E HPDGK+LIIGG IANFTNV+ATF GIV+A++ YQ  L  H+V IFVRRGGPNYQEGLR+M E+G T G+P+HVFGTETHMTAIVGMALG   IP      ++ A      N          SG+    A +   S  ES   ++  A      M Q S   P       + LF++ TKAIVWG+Q RAVQGMLDFDYVC R EPSV AMVYPF+G+H QKFY+GHKEI+IPVF  MA A+ K P+  VL+NFASLRSAYD+T++ + Y Q RT+AIIAEGIPE +T++L KKA  KGV IIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSV Y+SRSGG+SNELNNII+R TDGV EG+AIGGDRYPG+ F+DH LRY+  P +KM+V+LGE+GG +EY+ICR IK+GR+TKP+V WCIGTCA++ ++EVQFGHA ACAN  +ETAVAKNQAL++AG  VP SF++L + I+SVYE LV +G IVP  EV PPTVPMDYSWA+ELGLIRKP+SF+++ICDERGQEL+YAG  I++VFK+++GIGGVLGLLWFQ+RLPKY+ +FIEMCLM+TADHGPAVSGAHNTI+ +RAGKDL+SSL SGLLTIGDRFGGALD AAK+FS+A+DSG  PMEFVN M+K+GKLI+GIGH++KS+NNPD RV I+K+Y+++HFP T LLDYALEVE+ITTSKKPNLILNVDG I V FVD+LRNCG FTR EADEY+  GALNG+FVLGRS+GFIGH+LDQKRLKQGLYRHPWDDISY++PE
Sbjct:   99 TGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTR-EKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTA--NFLLN---------ASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQDSVPSPRSLQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISYVLPE 1097

The following BLAST results are available for this feature:

BLAST of TCONS_00070978 vs. Swiss-Prot (Human)

BLAST of TCONS_00070978 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ACLY	0.000e+0	67.85	ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ...	[more]

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TCONS_00070978 (transcript) - C. hemisphaerica