TCONS_00071174 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071174
Unique NameTCONS_00071174
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length994

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071174 ID=TCONS_00071174|Name=TCONS_00071174|organism=Clytia hemisphaerica|type=transcript|length=994bp
tctagacgaaaaaaaatgcttcaaaaagaaaacacagAATTCTACAGCTT
CACCATTGAACTCTTCAAACAGAGCAAAGACGGAAGTTGAAAAATGCAGC
AATAACAAATGTTAATACTCAATGAAATGGCACAATACTCAATTCTTTGA
ATCGAAGAAAATCACAGTAGTTGGAAAacaactttgttttttatcataCC
ATAGGTTTTTGGAAGTTGATCGATAGTTCAGTGGAAATACCAGAAATCGA
AATTTGATTTTACAGAATGACAGATAAATGGagACCGTACGGCCTGATGG
AGAAAGAATTAGAAGAGTACCGCAAATATTTTTGGCAGCAGGACGTTGAC
GGAGACGGTCAACTATCAAAGAATGAATTCAATAACATGTTACGTACAAT
GGGTTTGAATCTTACTCGTCAAGAAGTTGAAAATTTATTCGCCAAAACTG
ACGTTGATAAAAATTACAGGATCAGCTTCCATGAGTTCGCCGAAGCCTTC
ATTGCAAAGAAACGGGAACATGTGAGTGGCGATCGGCTACGACGCGTCTT
TCAAGAGGCCGATCGTGACCGTGATGGTTACCTGACAACAGATGAGTGTT
TGGCCGCTTTAAAACAACTCGGTCACGTAATGGATGATAAAGGCATACGA
CGTGTGATGGGTTTGATGGATAAGAATAATGACGGAATGATAACGTTTCA
AGaatTCTGCAAGTTCATGGCTTAGAGGTTGGAACGTTCGATGGAAGGAT
TGGATTTTCATAAGCCAAAAGGGATGGCTTTTTTGTATATAGTTACTTGT
AAATGTGGTTAAAATTGTTTCAATAAAAGAAAGTCTTTAACTTCCAAGCT
TCTACTCTGGAACGCgtttaatgttttttaatgACACCCTATTCCTTAGC
TCTGGTTTAGTCGGCCCACTTTTAGCCCACTTTATGCCAACTCtagcaat
tagaataggcagggctaAAAGTGGGCCGACTAAACCAGAGCTTA
Run BLAST on NCBI

transcript from alignment at scaffold_6:199705..213466-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071174 ID=TCONS_00071174|Name=TCONS_00071174|organism=Clytia hemisphaerica|type=transcript|length=13762bp|location=Sequence derived from alignment at scaffold_6:199705..213466- (Clytia hemisphaerica)
TCTAGACGAAAAAAAATGCTTCAAAAAGAAAACACAGAATTCTACAGCTT
CACCATTGAACTCTTCAAACAGAGCAAAGACGGAAGTTGAAAAATGCAGC
AATAACAAATGTTAATACTCAATGAAATGGCACAATACTCAATTCTTTGA
ATCGAAGAAAATCACAGTAGTTGGAAAACAACTTTGTTTTTTATCATACC
ATAGGTTTTTGGAAGTTGATCGATAGTTCAGTGGAAATACCAGAAATCGA
AATTTGATTTTACAGAATGACAGATAAATGGGTATGTTATCACCTCCACT
TTTGCTTTTTAATACGTTTATTGTTTCAATTGCTCCCAACTTAATCATTA
CATCAAATTTGAGCAATGATTCTGCAGTGAATTTTTTTAAAACACCAAAA
TCTTACCCTGTCTCACAGTCTCGATGGAGCTTTTTGATACAGTTGGGGTG
ATAAGTTCTATTCCAATCCCAATCGGGATCCTCAACTCAAAAGAATCCAG
TTGAGATGTGTTTGAATTGCGATTTCTTCACTGAATTTCAAATGGGGATG
AAATCAAAGTCAATTTTGCAGTGGCGTTGAAATGTTAGGATATTTTTCCC
ACGGGGATGGAATTTTGGCCAAATTCTCCAGTGGGGCAGGATTGTGTCTT
AAAGGGAGATTGTTCTCAAAGCAATACTTCGAAACAATCAAAACTAAATA
AAAAACTTTTCTGATTGGTTGAAAAAAGAGAATATTTCAAGTGAGGGGAT
ATAGTGTTAATTATAAGAACTTTCTGAAATGCGAAGGGATTTTAAGATTT
TTATTGAGGAATGGCATTAAAAATCCTTTCATATCTGAAACATCACTATG
AAATACAACTTGAAATTTTGCACAAAGACAGTCTGATAACTTTTGGTTTC
CCTAGTATAAAAAATTTAAATATTCAATGTCAATTATTTTTGGAAATTTG
TATTCAAAAGTGGTGTTGTCTCAAAGTATAGCTTTAAGGAGAATGTGACG
GTTGTGGTTTAGATAGATATTTAACCTTTCTTTACTTAAAGATTTTAATC
AAACTTATGGTTAGGGATTACTCACGTAACACGCTAAAGTTTGTATATCA
GACGTCATCAAAAAGTTGTTTATTTTTCTTAGGTAAATGTCAAGTGTCTT
TATATACATTTTTCATGAAAAAATATCGTGTAAAAGTTTCTACTTTGTTT
TGATCTGAGCGATATGGATTTACGTTATAAAAGCTTGAGACAGAAGGGAA
ACTTAGTAGTAGGAGATTTTGTAACTGTTGTTCAGACTTTTGTGGAATTG
AGGGGCTAGTTGAGGATCAACTATAATTTTTGGACATGGCTCGTGAAGAA
TATGTAAGTCTTTTAAAAACATTTCACTACTTTAACCAGCTAAGCTGTTC
TTTAATAACACCCACTTCTTACAGACCCGGGTTTTTTGAGCCAAAATAAC
GGACCGAAACTCGAGGGGATTGATATTCCTATGTTATTTCATGGCTGGGG
ATTTGATGAATTCCATTGTTTTCAAGTCAGAAAATTCACTGGGGATGGAA
GAAATACCACAATATTTTGCAGTGAGGATTTGCTTATCTGATTATTTTCA
GTGGGGACAAAAATTGAGTATAATTTTCCACTGGTAACGTTATTTTGACC
AATTTTTCCAGTGGGAGGGGGTCCCAATGAGTCTGTGAGAAGGGGGTGTT
TAATACGGCCAATGACATATTATCTGGTAATATAGCTTTCTGGGTTTTCT
TTTAACTTTTATGATTTTGGTTCCTACAGTGTTTGAGGCCCGAAAATTCT
GTTACCCAATGGGCAAGTTAGTGAGCTCCAAATTTTTCTCCAAAACGAAA
AATGTCATCCTTGTACAAAGTCTTGGCAGCTTTAAAACATACCTCTCCGG
AATTCTGAGAAATTCGAATCATGGGAACTTTCTTTTCCCCTGGTGGGGGA
CCTTCCAAAAGTTATTCAGTGGAGGTAGATTACAGAAAAAAATAGTACGC
ATCGACTAGCAAAGTCTTTTTTCAGAATGTATTCATGATATTCATGACGT
AATGTTGTATAAGGAAGCACCCAAAATAGCCCAGGAGTTCTCTTCTAGTT
TTCTATTGTTTAATTTCAAATTAGTTGCACATACCCGGTTTTCTCTGGAT
GCTTCCGTATGAAACATTACGTCATTACGCCATGAATATCATTAATCAAG
AACAGTGACTTGTCAATAAACATTGATCGATTACAAACAGTTCTATTCCA
CGACCGATTGTAGATATGTGTAAATTCTTTTTCCACCGGAGTTAAAAAGA
CTGAAATCTTTTAAAATCTAATACGTACTGTCGTTTAATTTCACTTCCTG
CACTAAGATTCTCCTTAATTTTCAGGGACTTTTCCGGCATGCACCGACGT
GAGATTGGAAAGGGTTTTTTTCTAAAGTTATGGAATATATTGTGAAACTT
TCCGAAGCTCACTTTTCAACTACCCGGAGTCCTGGACTTTTTTCTATAGA
AAAGTGGAAGTGGAGTTTTAGTACGGGAAAATATTTTATGCAAAATGACG
GTATAGTTACTTTGTGGTGGCACTTATAATGGAGCCGATAGGAGTTTGTG
GTGGCACTTATAACGGAGCCAATAGGAGTTTGTGATGATAACGTGTGTTT
CAACTAAAAACTCCTATCGGCTCCATTATAAGTCCCACCACATACCTAAG
TATGTCTATCAAGAATAATGACTCATTGATTAATAGCATCACGTCTGAGG
AAGGGATTTAAAAAGAGATATTTCCCTTACGCAAAGCTCGTTAAAAGTTG
ACTGAGCGAATTGCGACCAATTAAGGTCATTATACTTACCATGGCAATTT
CGTTTCGAGAAAGGCAGCTTAATGTGAAAGATAAAATTTTCTTAATGATA
AGGAAAAGTTGAAGGTATTTTGAGTTTTGGACTTGTAAAGAGACGGAATC
TTAGTGTTGTTTTTTTGTTTTTACTTAAAGATGTCAAATACTCAAGTCCA
ACAAAATGTAAGATATGCCACTCATACTCTAAGGTCCCGAATAGGTGGGG
TCCGAATTTGTATCTCCAAAAACAGTAACGTAGACAGGAGGGGCGCAAAA
TTTGTGTAGAAGAGCAGATTTTTATGACACTGTAATTATCTTTTCATAAT
GTAAAAAGATAATTACAATGTCATAAAAATCTGCTCTCCTACACAGGTTT
TGCGCCCCTCCTGTCTACGCTACTAAAAAACCCACAATGATAAGGTACTT
ATAAGCTACAACCAGGCTATTGATAGCAATTCAGCCTTTGATAGCTGAAA
ATATTTTCCAAAAGAAATTAACAGCGGGTCCTAATAAGCATAGGCGTAGC
AAGATACCCTGCAAAATTTATGGATGAGAGCGGTTTTTACGACACTGTGA
TTATTGTCTTTATTATATGTCATAAACGTCTGCACTCCCTCATAAATTTT
GCAGGGTATCCTGCAGCGCCTATGATAAGAACGGGGACCTTTGAGTACTT
TGTTATTTGACGTCAGAACAGATCAGTCGCGCTCTTCATTTTTTTTTAAA
TGGAGAATTTTTAATAAAATACAAAAACATGAAAAAAACGACCAAATTTC
AACAAAAAACGGTATCGCCTAGCAGAATTTCAACAAGAGATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCTTT
GTAATAAACCAAACCAATGTATGAGCGATTTATAGAGGCCCATGTGCATG
CACGGTGGCCTGGAAATCTGTAAAACATTATTATTATTATTATATTATGT
TAATTTTCCTGATTTATTAAACAATCCTGAACCCATAGACGCCATCGGAT
GGACAATGGAATCCAAGGCGTTGAGTTTAAAGCGTCAAAGCAGTTAGAAA
GGAATCTTAAACCTTATTCTCAAGCAAGAAAAAGTGAAGCCTAAATATTT
GTGCCACATTTACAGCTAATAGAAGGCGATTGTAATACATTCGATCAAAA
GTACACCCTTACAGTGCATTTCCAGGGTCTCGAAAAACCTTCCCTTAAGG
GCGACACATGCCGTGGGTTGGACCTTATGAATGCCTCCCCCCGTCTGGGG
AGCCTCCTCAACACGTCATAGCTCAGAACCAACTTCACTTTCGGCTAATA
TCCCATTCTTGATCGGTGTTTGAGGTTTGAGATGATGGAGATAAGACATG
AGAAAATAAATTCATGTTAATAATTTTTCAATAATCCTTCCATTAATCAT
ACTGCAGTAAATCGTGCAGTAGTCCAACAACAAGTTTCTTACTTATGCTA
TCTCTTTCGTGAGAAGAATAGCCAGCAGCAAGAGTAGCCATACCCTGGCC
TCACTTTCGAATTCAGATCTATCAGAAATGTGCTTTGTGTGTTATAACCG
TACTCTCAGGTGCCTAATAAACGGCCCTCGGACCTTATTAGAACCCCCCT
CCCCGTTTATTACATTTGAAAATTTTCTCAGCTGTCAAAATAAGAATCCC
TTATTGTACTTTAAAAAGCCAGGTTCTTAGTCTGAAATTACCTAATTTGG
GGTATTTAGAGGTATTATTTACAACCCCCCGTTTATTAGGCACCTGAGAG
TATGCATTATAACAACCCAAATTATTGTATTTTTTTGCTAGTTGCCTGCC
AACAATTCTCTTCAAGCCTTACGAGCTTTTTGATAAAAATATAAATGACG
GATTAAATGCACCCCCTTTTTTCGTTTTTTAAGCGACATGTTTTTGAAAT
ATGGCAATGGGTTTTTAACCTGGTTGGTTACGCGTGAATTCATTTTCCAC
CTTAGAGTTTCAATTCTAGCCATTTCGGGGCTTTGAAATCAATGGTAATG
ACTAAATTAGCAGTTCCCAGGTTATCATATTCTCCTTTGGACATAGATAA
AGAAAACATTTGGCATATTAACATTTATTGAATGCTAATTAAGAAGGTTG
GATTAAATGATTATTCACGGCCTACCTCATACCACACTCCATTGAAGTCA
ATAGGTGTGTTAATCCTTCTCTGTATGAATGAAGCTTAAGTGCAATCAAT
AAGAATTATATGTGCCCCGCAAAGTAATTCTTGAACCCTAAGCATTTCTA
TAAGAATAAACTATATAAGAACATAAGGCTTCGAAGGCCAAAATATTCAG
GACAGGTTAAAAACATTTTAAGGCTTTGCGAACTCTAGAACATCGAATTT
TTTAAAGAAATACTCAAAAATGGTGAAATTAAGAACATGTTAAGAACATT
TTTAGGTTCAAGACTCAAAAAGTTAGGAACATCATAAGGCTCAAAAAATG
TTGAATGCTCTTAGAAATGTCGAGCGGGGCAAACGTTTTGTTTTGACCGG
ACGCCTGCATTTCGGATGCAAAAGTTAATACCCTAATAGATTTCCATTAC
GGATTAATTGGTCTTGTTGTTTTTATAGTATACTTTAATTAGACTTTTGT
TGTTTTACTTATACTTTAATTAGGGTTTTTGTTGCTTTGAAATATAAAGT
TTATAATTTTTGTTTTTCATTTTTGCTACGTTGTAGTATATATCAGTTTG
AGATTGATTAAGTGTTGTTGTTAGAGTTTTTTTTAATATTTTTTGGTTTA
TTCCTATTCCCTGATTCACAATCCTTGGTATATTCCTTGTTGGGAAATTT
GAATAGAGTCAAAGGTAGGTTGATTTGCGATTAATTTTTTGATAATATCC
ATTGCTAGGCGTCATTAAAAGGTTGCCATGTTAGTGATGCATAAAATTGG
CATAACATTTTTTGTCAGATTGTTTTTTTTTTTATTAACCTGTAATTTAT
GATCACGGCCTCTTTGGTGCTCTGTGATGGCTTTATTTTGTATCTGAGAA
AATATATGGATCTTTCAATTCTGGGTCATTTTGTATTGTTGAGCCATGGT
AACCACATCTTGATAAGAATCTTGAAATCATATATAAAAGGAACTGCATA
GATATCAGATACTCATAATTTGCTACACCACACTTATAAGTTTTTTTGCA
GTGTCATTTTCGCAGTAGGAGAGAGGCTTTCTTATTTTCTTCAACCTTGA
GGCGAGAATGAAAAAATTAATGATGGTACAGTTGAATTTCTATAATTCGA
ACAAGCACGGGGAACTCAAATTTGTTAGAGTTACTTATTTGTTAGAGGGT
TTATAGGTAGGCTTTTCCTAATCCGTGTACCCACTACGTACTCAGTTAGA
GTTGAAGAAATTTTGGAGTTATGAAGTAAAGTTTAATGACGCATTGTTAA
CTGAAGGGGCTAGAGAACTTATTCGAGTTAAGGAGAAATTCGACTTGTAG
AGGCTCGAAATATGGAGACTCTACTGTACGTATCTTTAGACAAGCCAGCA
GGTGACAGGTGGCAGAAAACCTAAAGCTATGTTAGTATCTACATCAGTTC
TGATCTTTATATACTTAGACTAGTAAACCACGTCGTTGCAGCTTACGCTT
GCAAAGGGCTCATTACTTGGGCTTTTGACACCACCCTCCCACAGCAATTT
ATCTTTTTATTATCTTTATTCACGCTTTTGTGTGTCTCAGTAAAGCCAGA
CGTTTGCTAGTCCATAAAAACTAAGCTTTAGCTCACTGACTCAACAACAG
TTTTCAAGCAGTTGGTAATAATAAGTAGTCTAAATGCAAAGAAGGGCTTA
TTTTTCTGGGACATCTCCAGGTCAGTCTCTTAAGGTTGTCTTGGTAGCTG
ATATCCACTAACGAATTTGTGCTCCTTATATAAATTTACTGACTTCGTCT
TTGCAGAGTCTGCAATTCAGACTGTCTAGCTAAACCTGGTCGAAATGCGA
TTTCCTAGAATTACACCCCTGTCTCACAGCCCCAGTGGAACTTCTTGCCA
CAGTGGGATGAAAATTTATATCAAAATNCGATTTCCTGGAATTACACCCC
TGTCTCACAGCCCAGTGGAACTTCTTGCCACAGTGGGATTTTGAAAATTT
ATATCAAAATTCCAAAGGGGATATAAATTCTATTGTTCCTAGGTAAAAAA
CCATTCGGGATAGTTTTGGATTGCAATTTTTCCCATTGTTTTTCAAATGG
AGATGAGAACAATGCAATTTTCCAATGGGCTGAACTTATAGGGTATTTTT
CCCAACGAGAACAAAACATCTTAGCCAAATTTTCAGTGGTTACGGGTCTG
TGACACAGGGTTGTTTCATTCTCCTTTGAAGAAAATACATGGAATACATC
CGCATTCATTTAGATGGGTAGGAGTATTTTATAGAGCTGTTTTCATTAAA
GGCGATGAACATTTTTTAGACTGCTGTGTATGCTCAAAGGCAGGGAGGAA
AAAAATGACTTTGAAAAGAAGAAAAACGGTTTTTCCTTTTTGTATTTTGA
GTTTACTCACGAAGATTGCTGCGATTTTTTCCGTTTCCTATGAGAATGAG
ATACGAAAACTTCCTTTTTCCATAGTGCTTGTCGGTTATTGGAAATTTTT
TTATATAAGAACGTTTTACGATATTTAAAAGAATTATTTAATAGGATTTA
TTGAGATTTCTTAGTGAAGATTTCTAGGAAGCTTACAGAAATAACGTTTT
AATGTGTCCCAACCTCAAACAAACAACATGGAAAATTTACTTGATATGAT
AAAGCTATATTAGTTGTACCTGGTTGTGCTATAGGTCAAAGCCTTTAAAC
TTTGAGAGATTCTTTCCTGGAATGTCTGGTTTAAGTCTTAGTAAAGTAAT
CTTAGCCTGTGTTCTTACAAAAAAGGAAATAATATTGTAAACGAATTGAT
CTTTTTCTTGAAAGAGAGTTTTCATGAGGTGTTGAATGAGAATCAAGTCT
GAGATAGATAAAAATTTGAAGTAATATAAGCCAAAATTTGTTTTCAAGAC
GTATTTTTTCAGTCAAAAGAAGGGGGAATATATAGCAATTGAAGAAAAAA
TGACAGTAATTATTTTCATTTTTCCCAGCCTAACACACGACGTCATTTCG
ACGTACATCTAACGTCAGATTAACGTCATGGGCGTCAAATGGATGTTGCT
TAAACGTTTTCTGTCTGAAAAATCCATATTTTCATATTTCGAACTAGCCT
CTAAACCATTTACGTCATAAGTACCCACTTTCATTTTTTCATTGTCAACG
TAATTCTGCGGTATAGGGGCTGGGCTACCTTTATATATATATTTTCTGTT
AGTCTGATCGAGGAAGGGAGAAACGATCTTTTTCTCGAGCAAAATAGACA
AGAAAATGTTTGGGGTAAGGTTAATCAAAACTAACCTTTTATACATTTTT
TAAAAAGGTGTTTCATTGTGAAAAATATTCTTCGAGGATAAGAAGCAAAA
TGAAACAGCCGAATTATCCGGTCGGGTATACTACGAAAAAGGTCTGCTAT
TTTTCGGCTGTATAAAGGTCGTAATCATTCTTGAAATTTTCGGAGAGAGG
GGTTTTTTACTTTTCATGATTTTCTTCTTTATTTTCTTTTTCTAGAGACC
GTACGGCCTGATGGAGAAAGAATTAGAAGGTAGGTTTTTGTTTCCAAGTT
TTTGTTTTTTGTTTGAGAGGATTTTCATATACGGCTACAATGCTGTTTGA
TACTGATTTCTTAATTCGTCGTTTCTCAAAATTCAATTTCGGGTGAAAAC
CGTAATTTCAGCTCTTCCACTTTATGTCATCGGGTTTTTTAATTTGGGAG
GGGTTTATCGGCTTTCAGGCTATATTCTAAATCTTATTGTATCATTTTAA
AACTTTTAGATCATGAGATCCTTAAGTCTTAAGTCTAATGTTAAAACTCA
GAGTTAGAACTCTACTTTCCCACCATCAGTTAAAGCACTTAAAAATCACT
TGCTTTTTTGAAATTCTGCCAAATATTATGATCTGCATTGTAGATAGAAT
ATTTTACATATATATTTTACGTGGATAGTTCAATAATCAAGGACCTTTTA
GCCAGTCTATAACATCATCCACTGCTAGCCGGTTCGGAATATTTATTAAC
TGAACGGAGCATTGGCTAGAGCGGGAAACCGAGAACCCTTTAATTTGTGG
TGCTGAAATCGTAGACAACATGGCAATCTCTTCTTGATTCAAATCCTAGT
CATTACCTTTAAAATTAAACTTGCTAGCCTCCAGGGAAAGGTGTGACCTA
GCTTTGAAACCTTTTTAAAGTGCGCTAAAAGGATCATTGCATACACTAGA
TTGATGATTCCAAAAGAACGGTAGCAAAGATTTTCTTTATTATCAAAATT
CAATACGATAGTAGACAAATTCATTTATTTTCTCTATTTTTAGAGTACCG
CAAATATTTTTGGCAGCAGGACGTTGACGGAGACGGTCAACTATCAAAGA
ATGAATTCAATAACATGTTACGTACAATGGGTTTGAATCTTACTCGTCAA
GAAGTTGAAAATTTATTCGCCAAAACTGACGTTGATAGTATGTATCCCAG
CTGGAACACAACGTTGTTTCAATGTTTATCTAACGTTAACGTCAACGTTA
GATTAACGTTGAAACAACGTTGTGTGCCAGCTATGTATTGATTCCTTTTT
AGGGGGCTTTTTTACACCCCCCTTCTCACAGACCCGGTGGGATTCTATCA
GCTAGTGGGGTTAAAAATAACGGTCAAAAACTCGATAAGGATTGATATTC
CCATGTTTTTTATGGCTGGGGATTTAAATTCCATTGTTTTCTAGCCAGAA
AATTCTGTGGGAATGGAAAAAATAGCACAATATTTTACAATTATCGTATC
TCCGTTCGCAGTTTGTAATAATGAACACTTAATGATTTTACTAGCGAGCA
CCTCACTAAAAACCGGGATTTTTCATCATCAAAGTTCCACTTTGCCGATT
TTCGAAAAATAAAAGCCTTTCAAGTGCTTTGACGCAAATTCGATTATTTT
GATACTGCAGGAGCTTCGAAAGTTATAAGTGACGTCAAAAAATCGAATGT
TTAGAGCCCGAAAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCCGAAAAC
CCGGGCTCAAAACATTCGAAAAAGTCGCAAAGTGGAATAGACGTTAATTG
CGTAAAAAAACGCGGGTGACGTCTAGTATAGGCTAGAAAACCTGGGCTCA
AAACATTCGAAAAAGTCACAAAGTGGAATAGACGTTAGTTGCGTACAAAA
ACGCGGGTGACGTCTAGTATAGGCTATGATTGTATATGGTATAAAAAAAA
CGGGGAGGATTGGCATGTGTCAGTCTCGTCGCAATCGTGACGGGATCTTC
TAAATAGACACAAGACAAGGACAGGTCGATGACACTACTGCCTTGCCAAA
GATGTTGTCCTCTTCTACTGCCTTGCAATCATATTCTCTCTATAGAAGAT
ATACAACTGTTGCTCTCTAAAATAGACTGACGCACCAGTCAGGCTAACAT
ATCATGCGGGAATAGTGAGCGTAGTAGGAAATTCTGTCGATGAGAGGTGC
GCTTCGCACGAAAGTGGACATCGGGCTTATCTGATATTCCGATGGCGCAT
TGGCGGCCGCCCACGCTAAAGCTCTAAAGGAGCGGGCCAAAATTTTCCCG
ACCTTCAGAGCTTTAGCGTGTCGGAAGAAAATTTCTCCATCGAGTACCAG
ATAAACATCGGGCTTAAGTTAGATCGCTTCCAAATAGTTTTTGGGAAGAT
TTCGTGGGAATTTCCCTACTTTCTCAATTCATACCCACCTATTTTAACCC
GTTCTCATGCGCAGTTCCTATTTTACCAAAAACCCCACACAGCCCTCTAA
CATGGTTTAATTAATAGACTATTTCGCTAGTCTCTAAAGATGTCAACTTC
CAAAAGTGTTAAAGGGACTGAAAAAAATAGTGTTTAATGTACGCCACTTG
TTCTCTCTTATCTACCTGCAGAAAATTACAGGATCAGCTTCCATGAGTTC
GCCGAAGCCTTCATTGCAAAGAAACGGGAACATGTGAGTGGCGATCGGCT
ACGACGCGTCTTTCAAGAGGCCGATCGTGACCGTGATGGTTACCTGACAA
CAGATGAGTGTTTGGCCGCTTTAAAACAACTCGGTCACGTAATGGATGAT
AAAGGCATACGACGTGTGATGGGTTTGATGGATAAGAATAATGACGGAAT
GATAACGTTTCAAGGTACCTTAGCATTTGTTTTCTTTTCATGTTACACAT
TTCTTTTAATAAAAACATCCAAATGTTCTTAACTTTTTGATTTTTAAACC
AAATATTATTCTGATTTTCAGCATTTTGTGAAGATTTATATTTGATTTCT
ACAGTCTGTTTCATTAAGTTTAAAGCCTGCAGGGTTAGAGTAGAATCTCT
AACCTTTCCCAGGCAAAAAAAAAAGTGAAGCCACTTATTTCCCATTCAGA
ATGTGCCTGGAACGCGTCGCAATCATGACGACAGATTGTATCTAGTGGTT
CCTTTGTTTTTGAGGACTACATTTTTTGAAATCTAGATCTTAATTTCAAT
CCAGCGTTTGTGTAAAAACCACGCGTGGGCGTTCTGGATTGGAAATAAAC
GACTTCATTTCCTATCCAGGAGTCTTGAGCCTAGCCCCTCGGGCTTAGAA
TAAGTCAATGGTTTGTACCTCTAAAGAATCCTGCATTATAACACGCATGC
GTAATTTGTCGTTCTTTAAACATATGTAGTTAAACTGCGTGATAATCAAA
GAGGAGTAAATTCGTACTTAGGGGTGGACAAACTAACCGGGTCGGGGTTG
GGTTATGGACGGCGAAATATGTCATATTTTGTGAAATATGTTGTTCTTTT
TGTCTATTTTTAGCCAATGTAGGATTCTTTAAATTAAGCCTCTCATAAAT
CTTGTTTTCTTTTGTTTCAGAATTCTGCAAGTTCATGGCTTAGAGGTTGG
AACGTTCGATGGAAGGATTGGATTTTCATAAGCCAAAAGGGATGGCTTTT
TTGTATATAGTTACTTGTAAATGTGGTTAAAATTGTTTCAATAAAAGAAA
GTCTTTAACTTCCAAGCTTCTACTCTGGAACGCGTTTAATGTTTTTTAAT
GACACCCTATTCCTTAGCTCTGGTTTAGTCGGCCCACTTTTAGCCCACTT
TATGCCAACTCTAGCAATTAGAATAGGCAGGGCTAAAAGTGGGCCGACTA
AACCAGAGCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044235XLOC_044235Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071174-exon-scaffold_6-1575043694:213186..213466TCONS_00071174-exon-scaffold_6-1575043694:213186..213466Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1575043694:203838..203871TCONS_00071174-exon-scaffold_6-1575043694:203838..203871Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1575043694:202930..203073TCONS_00071174-exon-scaffold_6-1575043694:202930..203073Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1575043694:200703..200945TCONS_00071174-exon-scaffold_6-1575043694:200703..200945Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1575043694:199705..199996TCONS_00071174-exon-scaffold_6-1575043694:199705..199996Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1510915933:213186..213466TCONS_00071174-exon-scaffold_6-1510915933:213186..213466Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1510915933:203838..203871TCONS_00071174-exon-scaffold_6-1510915933:203838..203871Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1510915933:202930..203073TCONS_00071174-exon-scaffold_6-1510915933:202930..203073Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1510915933:200703..200945TCONS_00071174-exon-scaffold_6-1510915933:200703..200945Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1510915933:199705..199996TCONS_00071174-exon-scaffold_6-1510915933:199705..199996Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1491911889:213186..213466TCONS_00071174-exon-scaffold_6-1491911889:213186..213466Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1491911889:203838..203871TCONS_00071174-exon-scaffold_6-1491911889:203838..203871Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1491911889:202930..203073TCONS_00071174-exon-scaffold_6-1491911889:202930..203073Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1491911889:200703..200945TCONS_00071174-exon-scaffold_6-1491911889:200703..200945Clytia hemisphaericaexon
TCONS_00071174-exon-scaffold_6-1491911889:199705..199996TCONS_00071174-exon-scaffold_6-1491911889:199705..199996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:199705..213466 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.51303	4.11851	4.32051	3.27102	0	0.867174	1.3631	1.12949	6.69891	4.5847	7.81168	6.51874	3.48977	1.77105	5.97343	9.75582	2.57739	4.71932	3.64971	1.90958	2.0233	1.08235	5.79011	4.19288	2.69359	5.28263	1.39891	0.979823	1.95492	1.1629
Blast
[Close]
BLAST of TCONS_00071174 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.175e-18
Identity = 40/143 (27.97%), Postives = 77/143 (53.85%), Query Frame = 3 
Query:  294 LMEKELEEYRKYFWQQDVDGDGQLSKNEFNNMLRTMGLNLTRQEVENLFAKTDVDKNYRISFHEFAEAFIAKKREHVSGDRLRRVFQEADRDRDGYLTTDECLAALKQLGHVMDDKGIRRVMGLMDKNNDGMITFQEFCKFMA 722
            L E+++ E+++ F   D DGDG ++  E   ++R++G N T  E++++  + D D N  I F EF      K ++  S + +R  F+  D+D +GY++  E    +  LG  + D+ +  ++   D + DG + ++EF + M 
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00071174 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM37.175e-1827.97Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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