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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072100 ID=TCONS_00072100|Name=TCONS_00072100|organism=Clytia hemisphaerica|type=transcript|length=1491bp
CTTTCCTGGAAACCAAAAAGTCTGACGAACAAAAGAACTTCCTGTTTATC
CAATACAACATGACGGCCACCAGTGGTAATTTAATCACATGCGCACAACA
CATCACTGAAGAACTATGCCTCCAACACACCCTACAAGACAATACTTTCA
TTGTTTTCATACTACAAATTACCCGTCGCTTCGACAGTACCTTGAGCGGG
TTAAGCTGTTCACAAGCACATTGGGATTACATTCACATCGATGATCTGCG
TGAACCAGACATTCACATGCCGTCTTTCATGAAATATTTGGACCGTCCCA
TGAGTGATTTATTTGCACCGGATTGCCAGGAGGACCTAAGCATGTTGATC
AAAGGGAGTGTTCCATCTGCCATGAAAACATTGAATACGATGGGTGAGAC
GAGAATTGATGAATTGGCAGCTAAATTGCGAGTGGTGAATCATCTGTTTG
ATAAGAATAAAGGTGAACACTTTTTTCATTctctctaaaaataaaaattt
ttgcatcgaatctctacaactcgaatgtctccttaactcgaacaaatatT
ATGgttcctttagttaacaatgacTTATACAGCTtatactccataactcg
aaatttcttaactcgaacaaatttgtgcgccccgtgcgtgttcgagttat
agagactccactttAGTTCTTTATTGTTGATCCTTGACCCGTATTTGTGG
GAAAACCACAGATATCTCAAAACACTAGATTGAGCTTACTTTCTTCCTGT
CCCCTGAAAGTAGACGAGGCAATTCGCCTTCTCGCTTTCCCTCCATGTCA
AATGTTTGTTCTGATTGAACAAATTACCGGTACCGGAATTTGGTCCACTA
CTGTGCTCTActcagcaaagatggcgcatGGATGGCTTGAGAAAAACATG
GTAGCTCCATCTAATGTTTTACAAAAAATGTCTGTGGGAAAAACTCAAAA
TGTATGGCCTTGTAAAgaattttgttttattatttatttgacGAAAATTG
ATCATACTATTAAAACTCGTAAACTTTTCTACTTCTAACGTCGCCATGAC
ATGATTCTTACAATCTCTTCCATTTCAGTATTTTCGAGCACGGTCATCAG
CGAAATCCACAAGCAACTTTTACACAAAGAATCACAAGTCTTACCAGAGC
ATTCTAAAGGTTGGGTAATGCGTGAGGCAGTTGAACAACATTACATTCCA
AACTATGGAACATTCCGTGCATCTCTGGCGCTCTGTGTCGAAGACAAAGT
CATTCCAGTTTGGAAGAGTTTGTTAACGCTGATGGATGAGAATAGTAATT
TGATGGTTTTGCACCAAGGCATGGACCTTTATGGTGGTTTATGGACACTC
TTGTTTCAAGCATTCACCACCTCTGGTGAACACAATGAGAAACCGATTGA
AGAATCAAAACAAAGCAATTATTCTAGATTCCCATTTTCGAAAAGAATCA
GTTTGATGTTGGATAATGTGATGCAGACTTACGTCATCGGA Run BLAST on NCBI transcript from alignment at scaffold_71:75772..77262+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072100 ID=TCONS_00072100|Name=TCONS_00072100|organism=Clytia hemisphaerica|type=transcript|length=1491bp|location=Sequence derived from alignment at scaffold_71:75772..77262+ (Clytia hemisphaerica)
CTTTCCTGGAAACCAAAAAGTCTGACGAACAAAAGAACTTCCTGTTTATC
CAATACAACATGACGGCCACCAGTGGTAATTTAATCACATGCGCACAACA
CATCACTGAAGAACTATGCCTCCAACACACCCTACAAGACAATACTTTCA
TTGTTTTCATACTACAAATTACCCGTCGCTTCGACAGTACCTTGAGCGGG
TTAAGCTGTTCACAAGCACATTGGGATTACATTCACATCGATGATCTGCG
TGAACCAGACATTCACATGCCGTCTTTCATGAAATATTTGGACCGTCCCA
TGAGTGATTTATTTGCACCGGATTGCCAGGAGGACCTAAGCATGTTGATC
AAAGGGAGTGTTCCATCTGCCATGAAAACATTGAATACGATGGGTGAGAC
GAGAATTGATGAATTGGCAGCTAAATTGCGAGTGGTGAATCATCTGTTTG
ATAAGAATAAAGGTGAACACTTTTTTCATTctctctaaaaataaaaattt
ttgcatcgaatctctacaactcgaatgtctccttaactcgaacaaatatT
ATGgttcctttagttaacaatgacTTATACAGCTtatactccataactcg
aaatttcttaactcgaacaaatttgtgcgccccgtgcgtgttcgagttat
agagactccactttAGTTCTTTATTGTTGATCCTTGACCCGTATTTGTGG
GAAAACCACAGATATCTCAAAACACTAGATTGAGCTTACTTTCTTCCTGT
CCCCTGAAAGTAGACGAGGCAATTCGCCTTCTCGCTTTCCCTCCATGTCA
AATGTTTGTTCTGATTGAACAAATTACCGGTACCGGAATTTGGTCCACTA
CTGTGCTCTActcagcaaagatggcgcatGGATGGCTTGAGAAAAACATG
GTAGCTCCATCTAATGTTTTACAAAAAATGTCTGTGGGAAAAACTCAAAA
TGTATGGCCTTGTAAAgaattttgttttattatttatttgacGAAAATTG
ATCATACTATTAAAACTCGTAAACTTTTCTACTTCTAACGTCGCCATGAC
ATGATTCTTACAATCTCTTCCATTTCAGTATTTTCGAGCACGGTCATCAG
CGAAATCCACAAGCAACTTTTACACAAAGAATCACAAGTCTTACCAGAGC
ATTCTAAAGGTTGGGTAATGCGTGAGGCAGTTGAACAACATTACATTCCA
AACTATGGAACATTCCGTGCATCTCTGGCGCTCTGTGTCGAAGACAAAGT
CATTCCAGTTTGGAAGAGTTTGTTAACGCTGATGGATGAGAATAGTAATT
TGATGGTTTTGCACCAAGGCATGGACCTTTATGGTGGTTTATGGACACTC
TTGTTTCAAGCATTCACCACCTCTGGTGAACACAATGAGAAACCGATTGA
AGAATCAAAACAAAGCAATTATTCTAGATTCCCATTTTCGAAAAGAATCA
GTTTGATGTTGGATAATGTGATGCAGACTTACGTCATCGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072100-exon-scaffold_71-1491911889:75772..77262 | TCONS_00072100-exon-scaffold_71-1491911889:75772..77262 | Clytia hemisphaerica | exon |
| TCONS_00072100-exon-scaffold_71-1510915933:75772..77262 | TCONS_00072100-exon-scaffold_71-1510915933:75772..77262 | Clytia hemisphaerica | exon |
| TCONS_00072100-exon-scaffold_71-1575043694:75772..77262 | TCONS_00072100-exon-scaffold_71-1575043694:75772..77262 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:75772..77262 + |
Blast
The following BLAST results are available for this feature:
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