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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072653 ID=TCONS_00072653|Name=TCONS_00072653|organism=Clytia hemisphaerica|type=transcript|length=994bp
TAGGACATAAATTGTTATTTTATTATAAAGAGttggaaaaataaatatat
caaataaagttgaaattttacaaggaaaaaatgtttctttgATGCTAGTA
CAATCTTTTCTATAAACTAAATGCAGAAATTGTTATTGAAACTGAACCAT
GGAAATCTCTATACACTGCCCGAGTCTGATTAGTAACGCAGTAATCAAAC
TTGTAAGGAGtgattacgtaatgttttttcACCATTTAAGGAAAAAAGAT
TAAGTCAAGGGACAAGATAAGTTTGATATCACGAGTAATGGAGTTTAAAA
GAAATATGACGTACCGTCCGTATAAACGGCAACTATACATACTAATCTCC
ATGTAAATTTAAAGTCAAATTTGATTGAACAGGCCGTTAAGCTGATCAAA
TAAGTGCAAAACCTAAGCAGATCTGCAAAGGTTTTGagtaacttgaaaaa
aaaacggcGAAGCAAACATCTATTTGATTTCACCTCGTCATATTTCAGTC
AACTCTCTATCACTGCAACTACACGCACTTATTAACGGCCACTCCAAACG
CAGAGTTGGATCTTCATTTAATTCGGGCATttcttattccaaaaaaaaaa
taaaatgaaaagaaattctgATATTAAAAACATCAAGTATAGATACAAAA
GTGCTTTTGTAAAGGAATGATTGCTAAATATATGACTATTCTGACTTCCA
AAACCCGGATAAATCTTCGTTTAGaattttatctttatttcaaatataaa
gATGGCCTACTTAGGCAATCACCCTTTCCCGATTCTAAAACGTAACATCT
AAATATAATATGaaacaaaaatcataacatcATATCATAACATCCTGTCT
TACACATATTatataacaaaatatttgaagtaAAATAAAACAcgagaaat
taaatttttgaacagtgcaataatataaaaaacaacaacccAAGTCCGGA
AAAACTTAGGCTTTTTCGAAAACATACGACATTTTCTAACGTTT Run BLAST on NCBI transcript from alignment at scaffold_80:142245..143238 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072653 ID=TCONS_00072653|Name=TCONS_00072653|organism=Clytia hemisphaerica|type=transcript|length=994bp|location=Sequence derived from alignment at scaffold_80:142245..143238 (Clytia hemisphaerica)
AAACGTTAGAAAATGTCGTATGTTTTCGAAAAAGCCTAAGTTTTTCCGGA
CTTgggttgttgttttttatattattgcactgttcaaaaatttaatttct
cgTGTTTTATTTtacttcaaatattttgttatatAATATGTGTAAGACAG
GATGTTATGATATgatgttatgatttttgtttCATATTATATTTAGATGT
TACGTTTTAGAATCGGGAAAGGGTGATTGCCTAAGTAGGCCATctttata
tttgaaataaagataaaattCTAAACGAAGATTTATCCGGGTTTTGGAAG
TCAGAATAGTCATATATTTAGCAATCATTCCTTTACAAAAGCACTTTTGT
ATCTATACTTGATGTTTTTAATATcagaatttcttttcattttatttttt
ttttggaataagaaATGCCCGAATTAAATGAAGATCCAACTCTGCGTTTG
GAGTGGCCGTTAATAAGTGCGTGTAGTTGCAGTGATAGAGAGTTGACTGA
AATATGACGAGGTGAAATCAAATAGATGTTTGCTTCgccgtttttttttc
aagttactCAAAACCTTTGCAGATCTGCTTAGGTTTTGCACTTATTTGAT
CAGCTTAACGGCCTGTTCAATCAAATTTGACTTTAAATTTACATGGAGAT
TAGTATGTATAGTTGCCGTTTATACGGACGGTACGTCATATTTCTTTTAA
ACTCCATTACTCGTGATATCAAACTTATCTTGTCCCTTGACTTAATCTTT
TTTCCTTAAATGGTgaaaaaacattacgtaatcaCTCCTTACAAGTTTGA
TTACTGCGTTACTAATCAGACTCGGGCAGTGTATAGAGATTTCCATGGTT
CAGTTTCAATAACAATTTCTGCATTTAGTTTATAGAAAAGATTGTACTAG
CATcaaagaaacattttttccttgtaaaatttcaactttatttgatatat
ttatttttccaaCTCTTTATAATAAAATAACAATTTATGTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072653-exon-scaffold_80-1491911889:142245..143238 | TCONS_00072653-exon-scaffold_80-1491911889:142245..143238 | Clytia hemisphaerica | exon |
| TCONS_00072653-exon-scaffold_80-1510915933:142245..143238 | TCONS_00072653-exon-scaffold_80-1510915933:142245..143238 | Clytia hemisphaerica | exon |
| TCONS_00072653-exon-scaffold_80-1575043694:142245..143238 | TCONS_00072653-exon-scaffold_80-1575043694:142245..143238 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_80 | supercontig | scaffold_80:142245..143238 . |
Blast
The following BLAST results are available for this feature:
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