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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072663 ID=TCONS_00072663|Name=TCONS_00072663|organism=Clytia hemisphaerica|type=transcript|length=1438bp
ACGATTCACAAAGAAGTTTCTCAGAAAGTTTGGAAGATATCTCATGGCTC
GATCTAAAGAGGGAGCTCCAGATGATGGGGAAATATGAACTCGTTGACCA
TATCATAAACAAAACTTTGATTACTAAAGGTCTTAAAGCTGCTTCTGACG
GATTACGTAGACATTACGTAAACGATTTGATCCATTGTCTGGTGGAGCAA
CCCTTATCTCAAGCAGATGAAGATACCAATTCCGTGTTGCGAGAAGATGT
GTTTATTGATCTGGTTGTGCTACCATCTTCGACCGTCGACAAAGAATGGT
CAAACTCCGATCGTGCTGCTTTAATGGAACAGCAAAACATTCCTAAGACC
TCAACAAAAAGGGCAGTCAACAACATCTTTTCTCAAAAAGACGAATTGGT
CTTCGTGAGGGGGATTGGAGGTATCGGGAAAACGACACTTCTTGAGATGC
TGACTTATAAATGGGCGAAAGGAGAGCTTGATGCAGAAGTCAatattgac
tttgttttcaaatttacatGTCGTAATTTGAACacaatttcaagtcaatt
tacAAACGTCCAAAAACTTTTCGAACTGAAGTATCCTGAAGTCATGAAAT
TGATTTCATTCGACGATCTGATGGAGATTTCTGAGAGGGTTTTGATAGTT
ATTAATGGATTCGACGAACTAAAAGACTTATATCTTCCAGAAAGCTCATC
AGCTTCAAATAGAGACAGTCTTAATCTAACCGTTTTCAACCTGATAAATC
CTAAAGCAGATTGCCTCCCAAACCATAAGGTCATCGCATGCGGACGACCA
AAAGCTGTCGAATTTCtgaagaaagaaattcctatcAATTCCAATCGAAA
GAACATTGAAGTTTGTGGGTTTGACGATGAGAACATCTTGAAATATATTC
AGAACTTTTTCGGTGAACGTAAAGACAAAGCATTTTCTGTCCATCAACTT
ATCGAACGATCATACAATTTACGCATAATGGCGCGTGTTCCAGTCTTTTT
ATCCGTAATCTGTACAGTTTTCGAGGaagatttgataaaaaatcccATTA
ACACACAAACTGAACTTTACTTCTTCACAACACTCATTTTCATTAGAAAC
TATCTCAAAAGACAATCGCAGTCTTACACAAACTTGATGGATATTACCAA
AGATAAAACCGTCGCTGAAATATTGTTATGTTTAATGAAACTATCTGTCA
CAACGTATATGCAAAACAAGGTGGTCTTTAGTGAAGCAGAAATCGCATCG
TTGAGGTGTCCGATACCGCTCGAGGAAACCGGCTTTATTACAAAGCACCA
GAGATCAAATTCTACGGAAGTGACTTTTCAATTCCGTCACTTAATACTCC
ATGAGTATTTGACAGGATTGTATATCTCAATCACAAAAGATATCACACCA
TTTTTTGGGAATAAAGAATTATCGAGTTGCAAACCAAC Run BLAST on NCBI protein sequence of TCONS_00072663-protein >TCONS_00072663-protein ID=TCONS_00072663-protein|Name=TCONS_00072663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
DSQRSFSESLEDISWLDLKRELQMMGKYELVDHIINKTLITKGLKAASDG
LRRHYVNDLIHCLVEQPLSQADEDTNSVLREDVFIDLVVLPSSTVDKEWS
NSDRAALMEQQNIPKTSTKRAVNNIFSQKDELVFVRGIGGIGKTTLLEML
TYKWAKGELDAEVNIDFVFKFTCRNLNTISSQFTNVQKLFELKYPEVMKL
ISFDDLMEISERVLIVINGFDELKDLYLPESSSASNRDSLNLTVFNLINP
KADCLPNHKVIACGRPKAVEFLKKEIPINSNRKNIEVCGFDDENILKYIQ
NFFGERKDKAFSVHQLIERSYNLRIMARVPVFLSVICTVFEEDLIKNPIN
TQTELYFFTTLIFIRNYLKRQSQSYTNLMDITKDKTVAEILLCLMKLSVT
TYMQNKVVFSEAEIASLRCPIPLEETGFITKHQRSNSTEVTFQFRHLILH
EYLTGLYISITKDITPFFGNKELSSCKP Run BLAST on NCBI transcript from alignment at scaffold_81:40668..49531+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072663 ID=TCONS_00072663|Name=TCONS_00072663|organism=Clytia hemisphaerica|type=transcript|length=8864bp|location=Sequence derived from alignment at scaffold_81:40668..49531+ (Clytia hemisphaerica)
ACGATTCACAAAGAAGTTTCTCAGAAAGTTTGGAAGATATCTCATGGCTC
GATCTAAAGAGGGAGCTCCAGATGATGGGGAAATATGAACTCGTTGACCA
TATCATAAACAAAACTTTGATTACTAAAGGTATTAATTGATTTTATAATT
GATTCACAGTGGCGTATTTAGGAATTTTCGCAAGTAGGTCTAAAATTTGA
AGCAGAGTTGTTTCAAGTCCGGTTTTTGGAAAGGCTATTTTCTTTGCATC
TTACgtttatcatttttcatttcatcgctATCTGAGTTATTCTATACAAG
ATTCCACTTTTGTTTAGACGTACTTTGTATCGCACTTGTACTTTGcaaat
taaaaataagaaatttttttctcaacgaATACCCGTTTCACgttttgact
acctttttacGCTAATTAACCGCTTATGGTAAGAAAATAGATACTATGGT
GTATGGTCGCTCATAAGTGCCgagtaattttttattgaaaactcaaaaaa
aaaaaatcataaaagaaaatagatttaattttacaatttaaattgacttt
catttcaaaatcaatttaaaagtactttaatgggatgaactttcgcgggg
attaaatttcgcggatttctcagatttgggtgtcatccgcgaaaatccgc
taaattaaatcccaatggaaatttggaaagggcTCATCCacgaaatattt
ttaatcaaaactcaaaatatgtcaaataaatactttttgaatggttactt
gcatcataAAATAacgtgtatttcaacaaccaatatgcatgatttgacag
tataaagatacaaaatcgtgaaaatattgccactcaatagtgccacccgc
gaaactAAATCCCTgcgaaatttgaatttcgcggataggcccaaccgcga
aatttaatccccgcgaaattttatcccatcaaagtaattaaatatttccc
gttttccaaaagagaaatatttgttaaaacgggctttcttctaatctcat
aaccgatcaccatattgctaaggcatatgatgatctgaaaagtttattca
gcggaatttaaaaaaaacctcGTTTTCGGTGTCTGGGAAAAAACTATGAC
ATGTGACCAGATACCGGTATCTGATTGGCCCGCATTTTTCAAGatatatt
ctttattttatagGAAGCATTTTTTTGTATGGGTTAAGTAACAAAAACCT
CTGTATCTtgtcaaatattgaaaattttctaaaaagtttttcagataatc
ATAGGGTGCTCCAAGGTTCAGGTACCCCCAAAGAGTTTAGGTATCCCCAA
TCATTTTGAtacccccaaaatttttagaattctaaagtaaccccccaact
ttgagttacccccttttttttgctcttttgtcattcctgggAAAATACTT
CCATGGTGGCAAGCacttctttttcaacaaattcaaggGTGTCATTTTGA
CTATAATTTTCCAGAGATTTTTATATACCACAAACTTTCAAGGGTTTCTA
AGGTTTTTAGCTGATCTTTGctagttttcaaagatttcaaggaaatctgt
cgacaaaaggaattttcaatttttgtgtaaAGGAGGGCCCTTAAATTGcc
tgataattgataattttacaaCCACCTATTCTATCACCCAGACCTGCCAA
TCTCATACAATTCCAGTGGCACTTAACGGGTTAAAAGGTAAATCCCCTAA
GAAAGAGCGTGGAGTATCCCCTTGAGTCTCAGGTTCCAAAAGTATGTTTT
CTCATTTCTAAGTCACTGCGATGTTTGTATCCCATGCCATGGGATGTATT
TCTGAAagttaaaatggctgaaaattgccacaaaatttggcatttcaagg
gtttcaagggtatAAATCTTGCATTTCAAGGGTCCCCAAAATAATATTGA
CTTTTCAAGGttgtttcaagggtttcaaggaattcaagggtgatgacttc
atacaaaaacaacagcccccgcccccactaatgaaaatgcaggtaccccc
aaacatatcaggtaccccctaaatttaagaatacttccaggtacctggct
tttttaatacttatttttttaggtacccccaaatctCTGGGGGTGGATCC
TATGATAATAACATGCAACTGTACATGGAACAATCTGACTCTTCACctga
aaaaaatactaaattttTTGCTGCTGGAATGCCCTTTGAGCACATGAAAA
TATCATGGCTACAAAACTgtaaaacaaaatcatttaatTTGGAGTTTTTA
GACCTTTGCAAGCCAAAAAATACTTTCCAGAACTTAGAGTTGGTATTTGT
TTATCTTCCAAAtctattaaaaagttctcatgaaAGGTTTTTGAAGTCTG
ATTGTAAAAAGTATGCAACCCAAAAAACTGATCATCAAAACcgcttaaaa
aagctcaacaaacATAAAATGTCACCAATATATTATCCAAAAAGAGTATC
CAAATATCTAACAATACAAATAGAGCCTAAACTAATCAGCCTCTTCGTAT
TTAAATCAATTATTTGTCGGTTGATGCTTGACAGACAGTTCACACACGTT
AAGTTATAATTATATCGATAAAATGCTTCATTCCTCCTAATAATCAAGCA
GATAGCAAAGAGAGAAGTAATCATTACATAAGAGAATATACCTGTAATAA
TTTGGTTGGTGTTTGAGCCTTcatattgaacaaaaatgagaaaacatccA
AGCAAAAGCGGTGTAAAAATACAACTTTCAAACCAGTCTTTCAAAGCTTT
TAGGTCAATAAGTATGAGTATAAGTATATACTTTCTCAGCTCTTCCTTAA
ACAGCActgacttcattttttttattttaaacaaacCTACCACTGGTAAT
TAGATTGATATAGATTACCCGTCTGCTTTCAGGATTTCTGTGTCGTGGGA
TAGATCTTCCCACGCTACCGAAAACCTGGACAGCATAATAGTACCAATCT
CACCGACCTTGTCTACTTCCCAGAACTTCTTTAAATCCTCTTTCAAAGTG
TCTCTACCACAATATTCCGTCAAACAACGCAATAGATGAGTTTACACTAA
AGAACAATTTTGAACCGTTCCAAATTTTTTCCCCAATGAACCACTCAGCA
CCCAACCAAGACAAGACTGACTAGCCACTGGACCACTACAGCATTTCTTA
TACTTACCCGTGAAAAACTCATGATAAAAATCTGAACCGATCCATATTTC
AACCTCCGCATGACCTTCATTCGAATCCACTAACGTCAAACCATCAAGAT
GCTCAAAACTCCGACCTGCATAATCAACATCCTGCCTTGCGATGGGAATA
CAAACAACAGGTACACAGAGTACTTTGCAATCTATGTATCCCTTTCCAAC
TTTACGTTTCACTTTAAACCGAACcaccttcaatttttttacctttGCCT
CTTCATTCCCAAATGTCTTGATTAGGACTTTCTCCGTTCGAACCGTTTTC
AACTTCAATCTTTCAACCACATACTCAGAGGCGTAAGTCCTTTGACTACC
AGTATCAAACAAAAGCCTTGTATCGGTAGAGGTAATCTCACTACAAACTG
AAGCTTTGGCTGTTTGCAACAAGATACCTCCCTTTGCTTGAATATGGGAG
CCAATGTTTTCCTCTATTTCATCcacttctttttatttttccttttcttt
ttgctCATCCTACTTGCCAGGAGTTGCAAAACACAAACTAACATGATGTC
TTCCTTTGCATTTCCGACATGCATAACTTGAGCTGCATTCCTTGGCAAGA
TGATCAGGACTGGAACAAATAAAACACCTTCCTTTCCTAATTACAATACC
TTTCTGCGCTCTTGGTTTTGTAATTGTTCGGCATTGAGAAGACGAATGTC
CTTTACTGCAATACAAGCAACGTAATTGAGACTGACCCTGAATGTGCATA
CCACTCGTCGTGTACGGTGAATGCCGAtccttttctttctttactCCCTC
GCCACTAGTCTTCGGCACAATACAGTTTTCGTAGGCTCTAAGCTCTTCGC
ATTAAAATGCTGCATCATACTATCCAAATTCCAACTTGTGGCCCAAATTT
TCTAGAAATCGTCAACAAAAGGTCACCAGGAAGCCTTTCCTTTAAAATTG
GAATCAGAAGACTTCCATAAGCTGCTGtctttattttcaaagcttTCAAA
TTCCTGAGACAATTCTCAACATCATTATACAACTTTCTAAGATTCTTTAA
GTCATCTCTACTCCTAACCTTGTTCATCTTTAACAATGCTTCCATATGTG
CTGATATAAGAATCTGCTAATTTTCGTATCTGTCATTCAATATCTGGATA
GCCTGTTGGTAATTCTCACTATTCAAAGACAAACCTGAGACCGATCTCAA
AGCTTCGCCACTCAAGAATCTATTCAAGTAATTGAACCTATCACTATCTT
TCAAACTTTCGTTTTCATGTATTGCAACATTGTACTGATCCCGAAATCCT
TGCCAAACAAGAGGGTCTCCCTTGAAACTGGGAAGCTCCATCTTTGGCAA
CCTGCATGTCTGTATGTTGCTGGTGGAAGCTATGGATGAGGCTGAGCTTG
GGGGCAGGACTGTCTTTTAAAACCAATTCCTGCAATTTGATATCAATACT
CGCCCCTAGGTCATTGGCTGACTGGACATAGGTAAAAGACTGAACGATGT
CCTCGCTAATCTTATCTGCTTCTAAGCCTTTGAGAACATCCTCATTTGCT
GCCTCCAGCTATTTTATGACTTCCTTCTCTTAAAACCAGCTAACCTAGAC
TGTTGAATACCTTCCCCTGCAAGATAATCTTTATCTGAATCCACCGCTAA
ATTCAAAACTAGCCTCAAACCCTCTCTTTTCAAATATACGCAAACCTCCT
ATTATTCTAAATTATTAGAACAATGTACCCAACTGTGCTataacaataaa
aattaaacgtgctgtaaaaaacttaaaaatttggAAAGCAGAATTGCTGT
AAGAGAGAAAATAGGAGTTTGAGTGaaataaaatttcagaaaaatttaaa
agaagaaatcgttaaatttttcaaaacgtcCTCTAGGAgaatagcgagca
cctcactaaaaaccgggatttttcatctcgtttcttagtgagttccactt
tgacgattttcgaaaaatagaagcctttcaagtgttttgacgcaaattcg
atttttttctatactgcaggagcttcgaaagttaaaagtgacgtcaaaaa
ttcgaatgtttagagcccgaaaacccgggctcaaaacattcgtacaagtc
gcaaagtggaatagacgttaattgcgttaaaaaacgcgggtgacgtctaa
tATAGGCTACTAGGAGAAAAGtcctcagaaaaaaaaactccatCACAAct
ctaaaaaattttcaaatttcagtaACTGTCTTTACCGCTGACAGTAACCA
CACTTTATTTGCTCAAAATATCATAGGGGAGATAAACTTGCCTAGATTAA
CTCCAAAAACTTCTTACTGCTAAGAAGTCTCAAATTTCAAAGGAATagcc
ccccggggggggggcagctgggcaaaaggaccgacgggtatgtgcgggtc
ctaagggtaccttttatATAGCAAAGAAGAAGGATATcggtgtgaaaaaa
aatttagatgaTACGTAAATTTGTGTATATACCGTGCTGCTCTTAGTTCA
TTTTGTACAGTTGAACGACTCGAATGCTGACTTCTCTGATGTCCCTAATC
TGGGCGCCAtgtaaaatctttttaactCTTAATAGTTCTGGATCATGAGT
ATCAGTAAAAACGTAGAAACATTGAAGATTTTAGATATAAACTTTATACG
TATTTCCGCTCCTGAATATACTTTTAGAATGAATATAAAAGCTATGTACT
GTACGCAATCTAAAAATCGTGTTTAAGTCACGTGATTGCGCACGCGCCGT
TTCTTTCCCCAGACTTCTCGCTACTTTCCACACATAGTGCTTTTAGCAAA
ATAAGAAAGtgttaaaatctaaattttctttGCACTTAGATATTAGATCG
TTCGTCTGATATACAGAGCTAATAACAgttgaaaatgaagttttcaaCAG
GCTATCTCTTACTCCTTATTTCATCAACAATTCTTGCAGTTGAAATACCT
TTCCTCACGAAATAGTcctaaaataaaatctaaaacttGTCGGTGACCGT
ATTTCTAGTTTATCTTTTCCGTTATTCTGgtattttgggaaaaaatcgcc
ggtatttcggtattcagTACCAtttgagccccccccccctcttcaAAAGT
AAACTGGGTCGCTTCAGAAAATTTCAGCTCTGGAAACTGAGCTTCTCTCC
ATAAAAACTGGGAATTCagtattgttttttattaaactTAAAGCTATCAC
CCAATTTTttcagggaagaaattttcgcggaagttAATTTCAcaaatcag
agtttcaaaatgacaaattttgcggaatttaatttcgcgaatgagccgat
ttcaaaagtttcacggaatttaatttcgcgattgagaaatttcaaaagaa
tttctttttttacagagaaaatgtttttcatatttttcatcgatttcaag
ACATATTTCAGTTACGTTAACAAACTTTAACAAACTTTATcaacaaaata
ataacatcaaatatGAATGTTTCTATGATAATGATTAAACTTCATCGCCA
TATTTGTCTATAtctgataaaaaatacacgttacatgcttaaaaatcaat
tgtgtccatccTTTTTGGTAACACCTGGTtaataacaacaaaataaaaca
agaaaaaaaatcgaatttcacggaatttgatttcgcgatttagccatttt
ggtgtgtttcgcggaatttaatttcgcgaattacgcccaatttcgcgaaa
ttaaattctgcgaaaatttcttccgcgaaaatttcttcctagaGGGTATG
TCTCTCAGCTCCATATTATCTCTAAATGAAAGGCGGCCAGAAATATAAGC
AGTCATCGAAGGTCATTACACGTGAATTTTTACAGAAGTTGAGCTCAGTA
ATAATATATGATCCCGATTTGCTAGGGCAGAAGAGGTCAAAAAGGGTATT
TCTAAGTCACTCAGGCGGGACGATATGGGTCGGGCGGTATTAGATAGGTT
TTcagattatcaaaataaaagctttcaaataacGAAAGGTTCACTGGCAA
AAATTAGGGAGGTAAAACTGCGGAGATAAATGTTTAAGTCAAAGTTTTAC
TAAGAGTAAAGAAAGCCTGTTtcacaatttttcatatttttcaatttctc
ggaACTATGTCACTTGACCTACTTGACCTACCCTATATACGCCCCTGCTG
ATTGATCGGtcaaattattgattgattgattgacattgattgattgattg
attttttatattatcgacttgttgatttattgattgatctatcgattgat
tgattgattgattgattgattgattgattgattgattgattgattgattg
attgattgattgattgaatgtTGAAGGTTTTGAACACCATTTCATTTTAC
AGGTCTTAAAGCTGCTTCTGACGGATTACGTAGACATTACAANTTCATTT
TACAGGTCGTAAAGCTGCTTCTGACGGATTACATAGACATTACGTAAACG
ATTTGATCCATTGTCTGGTGGAGCAACCCTTATCTCAAGCAGATGAAGAT
ACCAATTCCGTGTTGCGAGAAGATGTGTTTATTGATCTGGTTGTGCTACC
ATCTTCGACCGTCGACAAAGAATGGTCAAACTCCGATCGTGCTGCTTTAA
TGGAACAGCAAAACATTCCTAAGACCTCAACAAAAAGGGCAGTCAACAAC
ATCTTTTCTCAAAAAGACGAATTGGTCTTCGTGAGGGGGATTGGAGGTAT
CGGGAAAACGACACTTCTTGAGATGCTGACTTATAAATGGGCGAAAGGAG
AGCTTGATGCAGAAGTCAatattgactttgttttcaaatttacatGTCGT
AATTTGAACacaatttcaagtcaatttacAAACGTCCAAAAACTTTTCGA
ACTGAAGTATCCTGAAGTCATGAAATTGATTTCATTCGACGATCTGATGG
AGATTTCTGAGAGGGTTTTGATAGTTATTAATGGATTCGACGAACTAAAA
GACTTATATCTTCCAGAAAGCTCATCAGCTTCAAATAGAGACAGTCTTAA
TCTAACCGTTTTCAACCTGATAAATCCTAAAGCAGATTGCCTCCCAAACC
ATAAGGTCATCGCATGCGGACGACCAAAAGCTGTCGAATTTCtgaagaaa
gaaattcctatcAATTCCAATCGAAAGAACATTGAAGTTTGTGGGTTTGA
CGATGAGAACATCTTGAAATATATTCAGAACTTTTTCGGTGAACGTAAAG
ACAAAGCATTTTCTGTCCATCAACTTATCGAACGATCATACAATTTACGC
ATAATGGCGCGTGTTCCAGTCTTTTTATCCGTAATCTGTACAGTTTTCGA
GGaagatttgataaaaaatcccATTAACACACAAACTGAACTTTACTTCT
TCACAACACTCATTTTCATTAGAAACTATCTCAAAAGACAATCGCAGTCT
TACACAAACTTGATGGATATTACCAAAGATAAAACCGTCGCTGAAATATT
GTTATGTTTAATGAAACTATCTGTCACAACGTATATGCAAAACAAGGTGG
TCTTTAGTGAAGCAGAAATCGCATCGTTGAGGTGTCCGATACCGCTCGAG
GAAACCGGCTTTATTACAAAGCACCAGAGATCAAATTCTACGGAAGTGAC
TTTTCAATTCCGTCACTTAATACTCCATGAGTATTTGACAGGATTGTATA
TCTCAATCACAAAAGATATCACACCATTTTTTGGGAATAAAGAATTATCG
AGTTGCAAACCAAC Coding sequence (CDS) from alignment at scaffold_81:40668..49531+ >TCONS_00072663 ID=TCONS_00072663|Name=TCONS_00072663|organism=Clytia hemisphaerica|type=CDS|length=4302bp|location=Sequence derived from alignment at scaffold_81:40668..49531+ (Clytia hemisphaerica)
GATTCACAAAGAAGTTTCTCAGAAAGTTTGGAAGATATCTCATGGCTCGA
TCTAAAGAGGGAGCTCCAGATGATGGGGAAATATGAACTCGTTGACCATA
TCATAAACAAAACTTTGATTACTAAAGGTCTTAAAGCTGCTTCTGACGGA
TTACGTAGACATTACGTAAACGATTTGATCCATTGTCTGGTGGAGCAACC
CTTATCTCAAGCAGATGAAGATACCAATTCCGTGTTGCGAGAAGATGTGT
TTATTGATCTGGTTGTGCTACCATCTTCGACCGTCGACAAAGAATGGTCA
AACTCCGATCGTGCTGCTTTAATGGAACAGCAAAACATTCCTAAGACCTC
AACAAAAAGGGCAGTCAACAACATCTTTTCTCAAAAAGACGAATTGGTCT
TCGTGAGGGGGATTGGAGGTATCGGGAAAACGACACTTCTTGAGATGCTG
ACTTATAAATGGGCGAAAGGAGAGCTTGATGCAGAAGTCAatattgactt
tgttttcaaatttacatGTCGTAATTTGAACacaatttcaagtcaattta
cAAACGTCCAAAAACTTTTCGAACTGAAGTATCCTGAAGTCATGAAATTG
ATTTCATTCGACGATCTGATGGAGATTTCTGAGAGGGTTTTGATAGTTAT
TAATGGATTCGACGAACTAAAAGACTTATATCTTCCAGAAAGCTCATCAG
CTTCAAATAGAGACAGTCTTAATCTAACCGTTTTCAACCTGATAAATCCT
AAAGCAGATTGCCTCCCAAACCATAAGGTCATCGCATGCGGACGACCAAA
AGCTGTCGAATTTCtgaagaaagaaattcctatcAATTCCAATCGAAAGA
ACATTGAAGTTTGTGGGTTTGACGATGAGAACATCTTGAAATATATTCAG
AACTTTTTCGGTGAACGTAAAGACAAAGCATTTTCTGTCCATCAACTTAT
CGAACGATCATACAATTTACGCATAATGGCGCGTGTTCCAGTCTTTTTAT
CCGTAATCTGTACAGTTTTCGAGGaagatttgataaaaaatcccATTAAC
ACACAAACTGAACTTTACTTCTTCACAACACTCATTTTCATTAGAAACTA
TCTCAAAAGACAATCGCAGTCTTACACAAACTTGATGGATATTACCAAAG
ATAAAACCGTCGCTGAAATATTGTTATGTTTAATGAAACTATCTGTCACA
ACGTATATGCAAAACAAGGTGGTCTTTAGTGAAGCAGAAATCGCATCGTT
GAGGTGTCCGATACCGCTCGAGGAAACCGGCTTTATTACAAAGCACCAGA
GATCAAATTCTACGGAAGTGACTTTTCAATTCCGTCACTTAATACTCCAT
GAGTATTTGACAGGATTGTATATCTCAATCACAAAAGATATCACACCATT
TTTTGGGAATAAAGAATTATCGAGTTGCAAACCAGATTCACAAAGAAGTT
TCTCAGAAAGTTTGGAAGATATCTCATGGCTCGATCTAAAGAGGGAGCTC
CAGATGATGGGGAAATATGAACTCGTTGACCATATCATAAACAAAACTTT
GATTACTAAAGGTCTTAAAGCTGCTTCTGACGGATTACGTAGACATTACG
TAAACGATTTGATCCATTGTCTGGTGGAGCAACCCTTATCTCAAGCAGAT
GAAGATACCAATTCCGTGTTGCGAGAAGATGTGTTTATTGATCTGGTTGT
GCTACCATCTTCGACCGTCGACAAAGAATGGTCAAACTCCGATCGTGCTG
CTTTAATGGAACAGCAAAACATTCCTAAGACCTCAACAAAAAGGGCAGTC
AACAACATCTTTTCTCAAAAAGACGAATTGGTCTTCGTGAGGGGGATTGG
AGGTATCGGGAAAACGACACTTCTTGAGATGCTGACTTATAAATGGGCGA
AAGGAGAGCTTGATGCAGAAGTCAatattgactttgttttcaaatttaca
tGTCGTAATTTGAACacaatttcaagtcaatttacAAACGTCCAAAAACT
TTTCGAACTGAAGTATCCTGAAGTCATGAAATTGATTTCATTCGACGATC
TGATGGAGATTTCTGAGAGGGTTTTGATAGTTATTAATGGATTCGACGAA
CTAAAAGACTTATATCTTCCAGAAAGCTCATCAGCTTCAAATAGAGACAG
TCTTAATCTAACCGTTTTCAACCTGATAAATCCTAAAGCAGATTGCCTCC
CAAACCATAAGGTCATCGCATGCGGACGACCAAAAGCTGTCGAATTTCtg
aagaaagaaattcctatcAATTCCAATCGAAAGAACATTGAAGTTTGTGG
GTTTGACGATGAGAACATCTTGAAATATATTCAGAACTTTTTCGGTGAAC
GTAAAGACAAAGCATTTTCTGTCCATCAACTTATCGAACGATCATACAAT
TTACGCATAATGGCGCGTGTTCCAGTCTTTTTATCCGTAATCTGTACAGT
TTTCGAGGaagatttgataaaaaatcccATTAACACACAAACTGAACTTT
ACTTCTTCACAACACTCATTTTCATTAGAAACTATCTCAAAAGACAATCG
CAGTCTTACACAAACTTGATGGATATTACCAAAGATAAAACCGTCGCTGA
AATATTGTTATGTTTAATGAAACTATCTGTCACAACGTATATGCAAAACA
AGGTGGTCTTTAGTGAAGCAGAAATCGCATCGTTGAGGTGTCCGATACCG
CTCGAGGAAACCGGCTTTATTACAAAGCACCAGAGATCAAATTCTACGGA
AGTGACTTTTCAATTCCGTCACTTAATACTCCATGAGTATTTGACAGGAT
TGTATATCTCAATCACAAAAGATATCACACCATTTTTTGGGAATAAAGAA
TTATCGAGTTGCAAACCAGATTCACAAAGAAGTTTCTCAGAAAGTTTGGA
AGATATCTCATGGCTCGATCTAAAGAGGGAGCTCCAGATGATGGGGAAAT
ATGAACTCGTTGACCATATCATAAACAAAACTTTGATTACTAAAGGTCTT
AAAGCTGCTTCTGACGGATTACGTAGACATTACGTAAACGATTTGATCCA
TTGTCTGGTGGAGCAACCCTTATCTCAAGCAGATGAAGATACCAATTCCG
TGTTGCGAGAAGATGTGTTTATTGATCTGGTTGTGCTACCATCTTCGACC
GTCGACAAAGAATGGTCAAACTCCGATCGTGCTGCTTTAATGGAACAGCA
AAACATTCCTAAGACCTCAACAAAAAGGGCAGTCAACAACATCTTTTCTC
AAAAAGACGAATTGGTCTTCGTGAGGGGGATTGGAGGTATCGGGAAAACG
ACACTTCTTGAGATGCTGACTTATAAATGGGCGAAAGGAGAGCTTGATGC
AGAAGTCAatattgactttgttttcaaatttacatGTCGTAATTTGAACa
caatttcaagtcaatttacAAACGTCCAAAAACTTTTCGAACTGAAGTAT
CCTGAAGTCATGAAATTGATTTCATTCGACGATCTGATGGAGATTTCTGA
GAGGGTTTTGATAGTTATTAATGGATTCGACGAACTAAAAGACTTATATC
TTCCAGAAAGCTCATCAGCTTCAAATAGAGACAGTCTTAATCTAACCGTT
TTCAACCTGATAAATCCTAAAGCAGATTGCCTCCCAAACCATAAGGTCAT
CGCATGCGGACGACCAAAAGCTGTCGAATTTCtgaagaaagaaattccta
tcAATTCCAATCGAAAGAACATTGAAGTTTGTGGGTTTGACGATGAGAAC
ATCTTGAAATATATTCAGAACTTTTTCGGTGAACGTAAAGACAAAGCATT
TTCTGTCCATCAACTTATCGAACGATCATACAATTTACGCATAATGGCGC
GTGTTCCAGTCTTTTTATCCGTAATCTGTACAGTTTTCGAGGaagatttg
ataaaaaatcccATTAACACACAAACTGAACTTTACTTCTTCACAACACT
CATTTTCATTAGAAACTATCTCAAAAGACAATCGCAGTCTTACACAAACT
TGATGGATATTACCAAAGATAAAACCGTCGCTGAAATATTGTTATGTTTA
ATGAAACTATCTGTCACAACGTATATGCAAAACAAGGTGGTCTTTAGTGA
AGCAGAAATCGCATCGTTGAGGTGTCCGATACCGCTCGAGGAAACCGGCT
TTATTACAAAGCACCAGAGATCAAATTCTACGGAAGTGACTTTTCAATTC
CGTCACTTAATACTCCATGAGTATTTGACAGGATTGTATATCTCAATCAC
AAAAGATATCACACCATTTTTTGGGAATAAAGAATTATCGAGTTGCAAAC
CA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072663-exon-scaffold_81-1491911889:40668..40796 | TCONS_00072663-exon-scaffold_81-1491911889:40668..40796 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1510915933:40668..40796 | TCONS_00072663-exon-scaffold_81-1510915933:40668..40796 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1575043694:40668..40796 | TCONS_00072663-exon-scaffold_81-1575043694:40668..40796 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1491911889:48170..48202 | TCONS_00072663-exon-scaffold_81-1491911889:48170..48202 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1510915933:48170..48202 | TCONS_00072663-exon-scaffold_81-1510915933:48170..48202 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1575043694:48170..48202 | TCONS_00072663-exon-scaffold_81-1575043694:48170..48202 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1491911889:48256..49531 | TCONS_00072663-exon-scaffold_81-1491911889:48256..49531 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1510915933:48256..49531 | TCONS_00072663-exon-scaffold_81-1510915933:48256..49531 | Clytia hemisphaerica | exon |
| TCONS_00072663-exon-scaffold_81-1575043694:48256..49531 | TCONS_00072663-exon-scaffold_81-1575043694:48256..49531 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_81 | supercontig | scaffold_81:40668..49531 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00072663 vs. Swiss-Prot (Human)
Match: NOD2 (Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens GN=NOD2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.075e-19 Identity = 91/365 (24.93%), Postives = 160/365 (43.84%), Query Frame = 3
Query: 345 KTSTKRAVNNIFSQKDEL------VFVRGIGGIGKTTLLEMLTYKWAKGELDAEVNIDFVFKFTCRNLNTISSQFTNVQKLFE-LKYPEVMKLISFDDLMEISERVLIVINGFDELKDLYLPESSSASNRD--SLNLTVFNLINPKADCLPNHKVIACGRPKAVE-FLKKEIPINSNRKNIEVCGFDDENILKYIQNFFGERKDKAFSVHQLIERSYNLRIMARVPVFLSVICTVFEEDLIK--NPINTQTELYFFTTLIFIRNYLKRQSQSYTNLMDITKDKTVAEILLCLMKLSVTTYMQNKVVFSEAEIASLRCPIPLEETGFITKHQR-SNSTEVTFQFRHLILHEYLTGLYISITKDITP 1400
K+ + +FS L V V G G GK+TLL+ L WA G+ E FVF F+CR L ++ + LFE +P+V + F L++ +RVL+ +GFDE K + S D S+ +FNL+ + + L N + + RP AV FL+K I N K GF ++ I Y++ E A + +L++ + L + +PVF ++ +E L++ T T++Y F+ + S S + + + LL L +L++ VFS ++ + + GF+ + + + +F H+ + Y++++ D+ P
Sbjct: 271 KSPATLGLEELFSTPGHLNDDADTVLVVGEAGSGKSTLLQRLHLLWAAGQDFQE--FLFVFPFSCRQLQCMAKPLSVRTLLFEHCCWPDVGQEDIFQLLLDHPDRVLLTFDGFDEFKFRFTDRERHCSPTDPTSVQTLLFNLL--QGNLLKNARKVVTSRPAAVSAFLRKYIRTEFNLK-----GFSEQGIELYLRKRHHE-PGVADRLIRLLQETSALHGLCHLPVFSWMVSKCHQELLLQEGGSPKTTTDMYLLILQHFLLHATPPDSASQGLGPSLLRGRL--PTLLHLGRLALWGLGMCCYVFSAQQLQAAQVSPDDISLGFLVRAKGVVPGSTAPLEFLHITFQCFFAAFYLALSADVPP 623
The following BLAST results are available for this feature:
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