TCONS_00073055 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073055
Unique NameTCONS_00073055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073055 ID=TCONS_00073055|Name=TCONS_00073055|organism=Clytia hemisphaerica|type=transcript|length=2578bp
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT
CAAAGATGAAGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTA
GCTGGAAAAGATCCAATTTTGGGCAAAGATGTGAAACTTAGTCCTCAACA
ATTGCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAAACAAG
AAGATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATGATAAC
TCATATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCTGTCAT
CCCTTACGTCATTGACTGCTCACTCGAGAACCTTCCCGATGCAGTCGACT
CCATCAAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGTTTT
GTAAAGCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATACCCA
CTGCTGGGGAAACGTCGGTATGGTTTCTTACTCTCGTATCTCAGTCGGTT
ACGGATGTGAATATCAACACGTCATGACTCACGAAATTGGTCACGTTGTT
GGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATACGTCACAGT
TCACTGGGAAAATATTGGTCAATTCAAGAGTGCTTTCGATATTGTCAAGA
ACACAGACTCCCTTGGTGTCCCATACGATTACGAAAGTATTATGCACTAC
CCATGGAACGCTTTCTCTGCCAATGGCCGAAATACCATGACTCCAAAACA
AGATACACGTGGACAGACCCCATATGTAGCCTTGAGTGACCTCGATGCTA
AGCAAACTTCATTGATGTACAACTGCCCAGCCATCGAAAAACAACGCAAA
GCAGCTGCTGCCAAAAGACACATTGGACAAATCGATGTCAAACCTGGAAG
TGAATGTGTCGATAAAAACCAATATTGTAAAGATTGGGCCAAAGCTGGTC
ATTGTTCAAAATCTTCATACACACGTGAACACTGTAAATTATCATGTGGT
TCACCAACCGCATGTCAAGGATCTGACTGTATCGACAAATACGCAGATTG
TCCAGCATGGAAAGACTGGGGACATTGTCATTTGAACCCCACTGTTGCCA
GGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAAGGGTCTCCACCAACC
CAACCACCAACCCAGCCACCAACTCAACCGCCACAAACCCGCCCACCAGT
TACCAAAGCACCCACACAAAAACCAAACCCAACTGGTCCAACCGAAAAGC
CAAAGCCAAATGGAAAATTCCTAGGAACAGGTATCTTGTGCATCGACACA
CACAACAAGTGTGGCGAATGGGCTCAACAAGGAGAATGCAAAGCCAACCC
TGGATGGATGTTACGTAACTGTATGAAATCTTGCAACGTCAAAACTTGCG
ATAAAGGAATCCAAAAACCTCAAGGACAATGTGCTAATCCCCTTGGTTTG
GCCATGGACGAGCGTGGTCAATACAAAATCCCAGATAGCGCTTTTTCAGC
ACCTACTGGATGGTTGGCTCCAGgaGCTGGATGGGAAGCTTCCGCCTCAA
ACGCCCGTCTCTACATGGGTGACGATTATGATAAAAAACGTATTGGTGCA
TTCTGCTCCGCCTCACACGATGCCGCCAAACAAGCCAATGGATACGTTCA
AGTTGACTTGGGAAAACAAAATACCATCCGATACATCGCTACACAAGGTC
GTGACAAATATTTTGAGagaatcgagaaattcaagatcTCATACAGTAAT
GATGGAAGCAACTTCCAAATGTACCAAGATGGAACCGGACAAGATAAGCT
TTTCGACGGTAATTGTGATCACGTGACACCAGTCTTGAACCAATTCACCA
CGCCCATCAAAGCTCGATACATCCGATACCATCCATGGAACTGGAACTAC
CCATGTCTCCGTATGGAATTGTACGGTTGttaagaaaaattatgaaaaat
tatgaaaaacattgaaacaTAGAATTATTGTAGAAATCAAACGTGAAATA
TAAATCTTATTTTTCTCGAAGTAataccattttttgaattttttttgact
ttgaaagAGATGAATCTCAAAGCACAATGCCCTATACTAGGAAAGATTCA
ATATCTTTAGGGTAGGAAAATCAATAAGCTCACTGGTTCAAAAATGATCC
CTGGTCAATTCTTACCAAACAAAAATACATCAATTTTAATGCACCAGTGA
AACAGCAAGACCACATGGGTACTGATATTAACTTGATGAGGAGTCTCATT
ATATATAGTTGTATTAATTAAACATTCATTAAGCAAGGTGATAAATACAT
ATGTTTCTCAAATTAAATTAactagattttgaaaaagattagGTCGACCC
TGTGTATTTCACATCACTAGGATATCTTGTAACCTTGTAAAAGTCCAATG
CCAGAAAGAAATACAAAGTATTCTTAAAAGTATACCCCCTGTTTAATCCA
AATTAAAGGTCTTTGGTTTTGAATATTGTGTTTAAGTCCCaaggggctag
agaggaatcccCTTCCTCAAACAAGGAAAAGTCCAGCCTCAATATTTGCG
CCGCATTACCATTAGGAATGACGGCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_86:1090236..1103447-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073055 ID=TCONS_00073055|Name=TCONS_00073055|organism=Clytia hemisphaerica|type=transcript|length=13212bp|location=Sequence derived from alignment at scaffold_86:1090236..1103447- (Clytia hemisphaerica)
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT
CAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAATCTTTTT
GAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAGGAACAAATTTTTGC
GGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGCAAAATT
TAATATCGCGGTTAAGAGGATATTTTGTATAAAATAAGACCTATTCTTCC
CTAAAAAGATTAATTAGATCAATTTATAGGTGATTTTCTAAACCATGAGA
ATATTTCGTGCTTCACGGAATTCAATTTCGCAGATTTCTCGATAAACCAC
GAAAGTAAATTCCACAAAAATTTATTCCGCGAAAATCCAGTGGGGATGGG
TTTGAAGTGCAATTTTTGAATATTGAATGGAACCCACCAAGTCAAGANGA
ATCACGGCATGTGCCGCCCTTAGGGTAGGTACTTTTGATAGAGTGTACTA
CAAGGATCTTCTTTTAGCTGGATACACTGTAAGGGTGTGTTTGGGGAATA
CTGAATTGCAAGACTGATAGTAAAGATCTGATGTATTTTTATAGTTTTGA
CTCGCACATTGTCGACATATCAGGCTCATTTTAGGAGAATAAGACATGCA
GTCAAACTACACTGTAAGGGTCAGAAATTTTCTGTAATATGCACTGTCAG
GGTACGTTTTCACTGCTCAAAAGCTGCACTGTAAGGGTCCCATTTTGAAA
GCCATATTTTTGGCGGCGCATGCCGTCGTTTAGAAATCGAGTGCCCCCTC
CCACCCCCTCACCCCGGTAACGATGGGGGTAATTTACTTGCAAAACAACA
ATTTAAGAAATCGCTTGATGAATCTAATTGTACTTAGGCAAAAATCTGTG
ACGCCCCTTTATGAACCTGTTTTGTTATTTACCCAGTGTCTAGAATTATA
AATAAATCTAATAAAACAAATCTGAAACAAATTGTTGATAGTTCTTCTTT
CTATAGCATAAAATTTCTACCCACATACTGGTAGTGCAAAGAAAATTTCA
ATTAATTCAATTGACTATCAATATTTATCGATTGATAATTTAATAAGTGG
GAGCCGAGTGCAAAATTGAAAATGAGGCAGTATATAAGATGTGTCGATTT
GAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAATCAAAGGTA
AGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAATCTTTTTGAAAAGGT
GCCTCTACCTAACTCGTCTACCTTAAAGGAACAAATTTTTGCGGAATTTA
ATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGCAAAATTTAATATCG
CGGTTAAGAGGATATTTTGTATAAAATAAGACCTATTTTTCCCTAAAAAG
ACCAATTTATAGGTGATTTTCTAAACCATGAGAATATTTCGTGCTTCACT
GAATTCAATTTCGCAGATTTCTCGATAAACCACGAAATTAAATTCCACAA
AAATTTATTCCGCGAAAATCCAGTGGGGATGGGTTTGAAGTGCAATTTTT
GAATATTGAATGGAACCCACCAAGTCAAGAAATTCATGAAACAAATCAAG
TCAGATTTTGAAGTTACTAATACATTGCTTCTCTGTTCAATTATAGATGA
AGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTAGCTGGAAAA
GATCCAATTTTGGGCAAAGGTAAGCAATCTACTTCCCAAAAAAGAGGTTC
TAAAAGTTACAAAGGTTTGACTCAAAATCAAGGTTTAAAAGGCTTTTGAA
TAATTAAAGGAAGGGCTTAACTTTTGATCAAACGCTTTCTTTTAGAGACA
TGGCATTTGGTAGAGTACTAAACTAGGGGCTAAACTGTGCTTTCATTTTT
TAATGGAGATGAAACAGCAGACTTGCCTTAGTAATATTCTACAGACAGAA
GCTAAATTGATCGAACCCTGTCTTCAACAATCACAGGCTAAGCTTCGGTT
TCATAAATTAAAACAATCACACGAAAATTTCAAAATCTATTATTTTCCTT
ACAGATGTGAAACTTAGTCCTCAACAATTGCCCGGTAAACTTTACTNCAC
GAAAATCAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAAT
CTTTTTGAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAGGAACAAAT
TTTTGCGGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGC
AAAATTTAATATCGCGGTTAAGAGGATATTTTGTATAAAATAAGACCTAT
TCTTCCCTAAAAAGATTAATTAGATCAATTTATAGGTGATTTTCTAAACC
ATGAGAATATTTCGTGCTTCACGGAATTCAATTTCGCAGATTTCTCGATA
AACCACGAAAGTAAATTCCACAAAAATTTATTCCGCGAAAATCCAGTGGG
GATGGGTTTGAAGTGCAATTTTTGAATATTGAATGGAACCCACCAAGTCA
AGAAATTCATGAAACAAATCAAGTCAGATTTTGAAGTTACTAATACATTG
CTTCTCTGTTCAATTATAGATGAAGTTGGTCATTTTAATTGCTGCATTTA
TTCAACTTTCCTTAGCTGGAAAAGATCCAATTTTGGGCAAAGGTAAGCAA
TCTACTTCCCAAAAAAGAGGTTCTAAAAGTTACAAAGGTTTGACTCAAAA
TCAAGGTTTAAAAGGCTTTTGAATAATTAAAGGAAGGGCTTAACTTTTGA
TCAAACGCTTTCTTTTAGAGACATGGCATTTGGTAGAGTACTAAACTAGG
GGCTAAACTGTGCTTTCATTTTTTAATGGAGATGAAATAGCAGACTTGCC
TTAGTAATATTCTACAGACAGGATAAATTGATCAAACCCTGTCCTCAACA
ATCACAGGCTAAGCTTCGGTTTCATAAATTAAAACAATCACACGAAAATT
TCAAAATCTATTATTTTCCTTACAGATGTGAAACTTAGTCCTCAACAATT
GCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAAACAAGAAG
ATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATGATAACTCA
TATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCTGTCATCCC
TTACGTCATTGACTGCTCACTCGGTAAGATAATATTTTAATGTTTCATCT
ACTTCCTTCAAACCAACTTATTTCCGAAAAGGAGTGTTGAACCAATGACA
CTTAATAATTCTTTAATGATTCCCCTTTAAGAAAGTAAAAAGATTCAAAC
TTACAGTGTGCATCTTTTCCAGGGTTTTAGCAGGTTTCCCAATCCACAGT
ACTTTTGAAAGAATTCCCTCGTTGGTTGTATTAGCCTCCTCAATGATTAC
CTGAAGTAGCAAAATACAGATAATTTGACTACCGGGTGTCCCAGAAAAAA
ATTCCGCTCTTTGAAGTGAATGTTCTCGAATTCTATGAATTTCTAAACAA
TCAATCCTTTTGCATTGGAAAGAAGGAGGATAAACTTAAATTTTGAGGGG
TCATTTATTAAATTTGGTCAACTGGATCAAAAGTTAAGCCATAATGAATG
AAAAATTATTTTTTTGTAATTGCTCAAAAACGTTGAAAATCGACCTATCG
AATTGTGATAGAAGCATGATTGCATGGAGCATGATTTTCATTGTTGAAGT
AATAAAAACCTAATAAAAGTATCTTTTTATGAAAAAAGAAGTAAAATTTT
AAGTGAAACAAAGAAATTTATCTAAAAATCTGAAAAGTTTGATAATTCCA
ACGGATAATTCACTTCAATGGCTACACTGATGAAATCAACGCTACTTTTG
ACTTTCCGGGTGCATAGGCCAAAACTTGAAGCTAAACTCCATAGAAAATA
ATTTGAAATGACCCAAATGAAAATCTTTAGCCCTTTAGAAATTATTTCAA
GCATTTTTTGTTTTCGTGTCCACTTTAAACTCTTTATTCCTGCAAAAAAG
TAATAATTAGGTTATAAAATTTGATGGGTCGATTTTCAACTTTTTCGAGC
ATTTTCAAATAATGAAACTTTTATTCATTTCAGCATAATATTTTATCTAG
TTGACCAAATTTGATAAATGACCCCTCATAATTTAAGTTTATCCTTCCTC
TTTCCAATGCAAAAAAGATTGATCATTTAAAAGTTCATAGAACTCGAGAA
AATTCACTTCAAAAAGTGGAACTTTTTTCTGGGACACCCGGTATTTTATA
CTGATATATACCAGGATCTACCTAGCTCTACTTAGAGAGTTCACTTCACC
AACGTCAAAAGAACCAACCAGCCAGCGGAGTCCCTGATGGCACACCAAAA
TGAAATTCTAATTACGCCAACCCGCCAAAAATATTCTGCCATCACGTCAT
TACACCGAAAAAAGTCTCCTATTAATCACGTATAACGCTTTTTGAAATTA
TTCATCACGCCATCACGCTAAAAAAGGCCGAATAAAACCATTGCGAAAAC
CGCTTGGAGGTTTCTAAAAGGTAGCAAAAGTACAGCTCAAGAAAAAGGGT
TTTGAAAAAGTGAGATTATACTGTAATAGCTGGGCTATATCACAAGATTC
TATCTTTCTTTTTTTTACCAGAGAACCTTCCCGATGCAGTCGACTCCATC
AAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGTTTTGTAAA
GCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATACCCAGTAAG
TCTTTTTGCTAAACACCCATGTCTTACAGCTCCGGTGGAACTTTTTACCT
CAGTATGGCGATAAACCCAATGTGGATAGAAATTCTATTGTTCCAAGGTT
AAAAAATCCAGTGGGGATGGTTTTGAAGTGCAATTTTTGAATATTGAATG
TCGAATGGGGATAAATCAAAGTCAATTTCCAAGTGGGGCTGAAATTTCAG
GATATATTCCCACCGGTGACGAAATTTTAAAAAACCCGTCCCAGCGGGTC
TGTGACACAGGGGTGTGCTTAAGTCTTCATTTTAGATAATACACCTATCA
AAAACGAGAAAAGGCGTTAGAGTTTACCAGGGAGACATTACGTTAAAAAG
TCCATATCTGCCAGAGCATCAATTCTTAATGACATGACATTCTGCTTCAA
CTCGTCTTGGTAACCTAAAGATCGCTTTCCTCACGCTAGTGTTTTTGCAG
TCAGATGCAGCAACGATAGATGTTGGAGAGTGGGTTAAAAACCTCCAAAA
ACTAAAGATTTTGGTANACGCTAGTGTTTTTGCAGTCAGATGCAGCAACG
ATAGATGTTGGAGAGTGGGTTAAAAACCTCCAAAAACTAAAGGTTTTGGT
AGAGACACAGCTCATTTTGAATTCAGGTTACCAACTAAAAGGCAACTTCA
ACTACTTCGTAGTCTAAGGGTTATATCTAAACTACTAAGGCGTCTTCTTT
CAGTACATTGAAACGATTATTCATTTATAGCTGCTGGGGAAACGTCGGTA
TGGTTTCTTACTCTCGTATCTCAGTCGGTTACGGATGTGAATATCAACAC
GTCATGACTCACGAAATTGGTCACGTTGTAAGTTTTATTGAGCAGATTTT
CTTCGTTGTGCCGACAGACCTTTTTGTTTTCCAGTAACCCATAGACATAG
ATTAGTAATATACAACATGGTATCTCTTTCGAAATTATTCGAAGAGCTAG
CAGCAAACTTTTTTTTACGTTTTCAATTTCTTATGATTTCAAATGGGCTA
TTCCAGAAATAAGTACTTACCCTTACAATACATTTATCAAAAGTCCACCC
TTACAGTGCATTTCTGCTATTTTCAAAAACATACCCTTAATCGACGCACA
CATACCCGTCGGTCAATCTTTCTAACTCCACTCCGTGTTTCAACGTCAAC
ATTTCTAGTACCGATCAACTCTTATCATCGTTTGATAGATGTTTTTTTTA
CGTTGCAATAATAGTCTCTCACTGAAAGGGTTAACCCTTTCCGGACGCAC
GGGCCACTGGGTGGCCCATGAATCGTGTTCCTATATGACGCAGGGGCCAC
CGGGTGGCCCATAGCTTTGTAAAAGATTTTAACCGTTTTCGCGCCAAAAT
ACAATAACATGGTTTTGAATAATGATTTTGAGATAAATTTCCCGTAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCCTTTTACTCTATTTCT
TTATTCAAAGTCAAAAATTTTGCCTTTCCGAAAAAAAATCTGCCGATTTT
TCGGTCACGTGACCAGGTGTCAGCCATATTTAAAATTATTTTTTTGGTTT
TTCAAAACCCCTTTTACATGTGAAAAAAACGAGGTATTACTTATCGTGAT
ATCTTTTATCAATCACTTTCTATTGCAATTTTAGTGAAGCCAGTCAAAAA
TCAAATTTTTGTTTGCGTCATATAGCCGTGAAATCATGCGTCCGGAAAGG
GTTAAGAAAAGACAGGTAATTTCTAATGTTTGTGCTTTGTGCTAGCGTAC
CACCAGTTAACGTGATAAAGCCTGAGATTCATTGGGTTGAGATTCCTACT
GTAGGCAGGTTTATGAAATACACATGATTTGTTTTCCTCCGTAAACACAG
TCTCGAATCTCATTAGTTTTCATAACTGAATGGTTTACTCAGAAATGGTT
TTCAACCGTATTGCCTGTAGGCAAATACTAGTTTTCATATTTTCTAGGTT
GGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATACGTCACAGT
TCACTGGGAAAATATTGTAAGTTTTTTTCGAGAAAATGTTTACCTAACGT
CACAATTTCTAGCTACGATCATCTCGAGAGAACTTAATTCTTAGAAAGTC
CTAGCAACAGAGCTAAAAAACACAATAATTTCTGTTAGTGAGTGTCCTCT
TAAGCAATTTTTGCAAAAGCGACACCATTGCAATCTTTCAAAAGCTTTAA
AAAACAATAGCAGTGGCGTCAAATCATCAAAGAAGTACAGTACAAGCCAT
GAATGTCTAGTATAACGTTTAGCTGTAAGATAGGGTTTTATTCCAGATAG
AAACATAAAAGTTTTCGGAGTTACTCAAAAAAGTAAAAAAATATTGTTTG
ATAGAATGTCCCATTATATTCCATCCATATCTTTAAAGTTCATTGCAAAC
GAATTTTTTATCTTGAATTCCAGGGTCAATTCAAGAGTGCTTTCGATATT
GTCAAGAACACAGACTCCCTTGGTGTCCCATACGATTACGAAAGTATTAT
GCACTACCCATGGAACGCTTTCTCTGCCAATGGCCGAAATACCATGACTC
CAAAACAAGATACACGTGGACAGACCCCATATGTAGCCTTGAGTGACCTC
GATGCTAAGCAAACTTCATTGATGTACAACTGCCCAGGTGAGATTTTCAA
CATTTACTTAATTTAATTATATTGCCTGCTAACGTTAAAGGGTATATTAC
GTACACGTCATTAAGCTATAATTGGTAAGCTTTTTCTAGACTCTCAATGA
TACAACATAGAAGTAGAGAATAAACTTGCAGGCCCGGTGGAAGCGGGGAG
ACTTGAGCCTACCCAACTTTGAGCAAATGACATTTTTTTATCAAATTCCA
AGCGAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTTTACGGTTG
TTCCACCGGGCCTGACTTGTGTATCAGTAAAGCAATTATCTCGATCGGAG
AACCAAACCCATTTTGGGAATTTGCCCTCTTCTGGAAACGAAGTAGTTCA
TTTTTCTTGACATTTATACATTTGACGCAATCACGCAAATATACGTTCCA
AAGAGATATTTTTGCCTTCAATTTTCCCGTGGTCAGTATATACTGTATCA
GAAACCTTTGCAGATAAAAATATCTTTTAAGAGAAGTCTGATACAGGACC
GTTTCTTGATCGAAGTATTTTACTTTACGCTGTACAAAAGTCACCATAGC
AAAATATTTTACCAAAACGCAAAAGAAGACTTGTTACAATCAAAAATTTA
TTTCGATTCTATTTCAGCCATCGAAAAACAACGCAAAGCAGCTGCTGCCA
AAAGACACATTGGACAAATCGATGTCAAACCTGGAAGTGGTAAGCGATTG
ACAGATTATCTAAAGTGAAATCTATTCATTCACTCAAATCTTCTGTCAAG
TCCCAGTTGGCCATTGAAACTGTGACAACCATTGAAAGACTGTATACCAT
TCTAATAAAATATTTCTAACAATCTAATCCAAGGCCATAAGAGGTCCGAA
AAAGAAAGCGCAGAGAAATTTCTGGAATACCTCAATACAAATTTATCAAA
CCACAATTTATTTGTGTTGTTTTAGAATGTGTCGATAAAAACCAATATTG
TAAAGATTGGGCCAAAGCTGGTCATTGTTCAAAATCTTCATACACACGTG
AACACTGTAAATTATCATGTGGTTCACCAACCGCATGTCAAGGTAAACAT
ACAATCGAGTTTCAAAATTTCCATGTGCAAATCCTTTTGAACTAATCATT
AGTCCCTTCAAAGAATCTCAAAAACAAAAACCTGAATCTCACAACCATTT
CAATATAAAATTAGACTTTCCGTTGAGGTTTAAAATTAGAGAAACACAAA
TGCACCATATACATACGCAAACACCACATTGCATTGTTTTCTGACATTGC
ATCATGGATCAAACAGCTGATTTGTTGCAATTAACGTATTGTCTGATTTT
ACGTCACTCATAGCCAATCAGCTGTTGGATTTGTGATTTAATGCCAAAAG
TTATTGCAAAGGTGCATATCAAGAATAGATGACGATCAGGGAAATAATTA
GAAATAAAGAAATTAATGCTAAAAGAGTACCTTGTGTGCGATTCACTTTT
TAAACCATTTGTTCTCTCTCTCATAGGATCTGACTGTATCGACAAATACG
CAGATTGTCCAGCATGGAAAGACTGGGGACATTGTCATTTGAACCCCACT
GTTGCCAGGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAAGGTAAGCG
TTCATACAGGTTCATAAGATAATTCATGATATTCATTACGTAATGTTATA
AACAGAGGTACCTAAAACGACCGAGTGTTTGCAACTGATTTTCACTTTAA
ACAATAAGACTGGTGGTAAACGTCCGGGCTATTTTGAGTGCTTCCGTATG
AAACATTCACGTCTTGAATACCATGAATTTAATTTATAGTCCATTCACTA
TCATCTGGATAACCGTTAACGACTTTTAAGTAAAAACTTTTCTTTTCACA
ATCAAAACAAATAATTTGAAGAACTTTATTCACATGGTAGTGGACTGAAT
GAAATTATCTGACAGTATCTGTTAGAAATGTGAAGATATTTATTGTTTGA
AGATCAACTTTGGCTAAAAGCAAACTGGCTTCGTTTTGGTGTGATGTGTC
TGTATGTAATAGAAATGCCAGTACTAAAACGACTGGAAAAGAAAAGCTTA
GAAAACTCTGAATAATCTAAGCAATAACAAATATCATAACGAATTACCTC
GACCCTTTTACAATCATAGGGTCTCCACCAACCCAACCACCAACCCAGCC
ACCAACTCAACCGCCACAAACCCGCCCACCAGTTACCAAAGCACCCACAC
AAAAACCAAACCCAACTGGTCCAACCGAAAAGCCAAAGCCAAATGGAAAA
TTCCTAGGAACAGGTAAAGTTTTTGTCAGAGTAATGCATTTAACCTTTTA
GCGAGTCAACCCTTTTTTAAATGGCCAAAAAGACGAGCTTAAAAAAACTT
AAAAAGTTAAATTTGAAGAGACTCATATTCATGATATCCACCATTGTAAT
GTCTTCCACGGACTCAACAGCTGATGTGATTGGTTGTAAGTAGCGTATTG
ACTGATTTTACGTCACTTAAAACCAATCAGGTGCTGGGTCCGTGATGTAA
TGTCAGAAGACATTGTAATGGTGCATATCATGAATATGTGAGCTCAAGTA
TCATAAACTGATAAGATTCCTGCAACTTCTTTTACAGAAAGCAATAGACT
CTAGAAGCAAAGCTGTTTACCTTTCTCATTCTCATTGGTAATTTCAGGTA
TCTTGTGCATCGACACACACAACAAGTGTGGCGAATGGGCTCAACAAGGA
GAATGCAAAGCCAACCCTGGATGGATGTTACGTAACTGTATGAAATCTTG
CAACGTCAAAACTTGCGATAAAGGAATCCAAAAACCTCAAGGACAATGTG
CTAATCCCCTTGGTTTGGCCATGGACGAGCGTGGTCAATACAAAATCCCA
GATAGCGCTTTTTCAGCACCTACTGGATGGTTGGCTCCAGGTTAGTGAAT
GGGCTTTTCCAGAAAACATTTTTACTCCGCTCACTGTTTGAGAATATTGA
TTTTTCGAAGTATTGAACCCCCTGGATATCCTCTCTTATAAAGATGCTTA
CCCCTAGATATCGTATTTTTTAACTTGAAAATACACTTTACCCCCTTACT
CCCTTGTAGATATTTAACCCTCTGAATATCCACTTTTGAAAAGAAATCGT
TAACCCCCTGGTTATCCGACATCCTCAACAGGGGGCGACACGGAAATTTT
CTGGAAAAGGCCAATCTTTCGTTTAGAATATCCAAGAGGCTATTGACAGT
ATCTGTTAGAAGTTGCAGCACATTGGCGATATATTCAAGAGGCTTTGGAA
TGCCTTTAAGCCTGAATGGGAGTATAAGAATATATTAGACGTGATTTTGG
TTTAAAAAACCAACTATAGAGACGAAAACAGATCCCTGTAATTCTTTAAT
GTAAAATAACAAGCTGATAATTCAATCCTCGTGATTTCACGAGTCAAAGT
CAATCAATATCAACAAAAATTCAAACTCGTCAAAAATGATAACCTTTGCT
AATCTCAACAAAAGACTTACCAACATTTTTCAATTTTTCTTTTTTCTAGG
AGCTGGATGGGAAGCTTCCGCCTCAAACGCCCGTCTCTACATGGGTGACG
ATTATGATAAAAAACGTATTGGTGCATTCTGCTCCGCCTCACACGATGCC
GCCAAACAAGCCAATGGATACGTTCAAGTTGACTTGGGAAAACAAAATAC
CATCCGATACATCGCTACACAAGGTAAGCTTTTTTTGATAACACCTTAAA
CGGTAACAGAAAGAAAACTGGTAAATTCGAGATAAGTCTAAAATACTAAT
TCAGTTGACACACTGTTTTTCACAACATCCATGAACGTTAGATGAACGTT
GAATGAAACAGCGTTGTGTGCCAGCTGGATTACAAGGTGTTATGGGGAGC
CAGCATGTAGTACACCCCCTTCTCACAGACCCACTGGATAAATTGACCAA
AATATTGTCTCCGGTTGAAAATTGTCATCCGATTTTCGTCTCACTGAAAA
TAACCAAATAAACCAATCCTCGCTACAAAATATTTACTATTTTTCCAGTC
CCCAATGAATTTTCTAACTTGAAAACAAAAGAATATCGATCACCATCCAT
AAAAAATATGAGAAAACCGATCCCCATCGAGTTTCAGCCCGTTATTTTTA
TCCCCATTGGCTAAAAAAATCCTACTAGGTCTGTGAGAAGGGTAGTATGA
CAACATAGTACAGAAGAGCAATCTCCAATATACTAAAATATTTACTTTGA
TTGATATTGATGGATAGATTAAACTGTTATTGATCAATGTTTCTTCACCA
CATCCAGGTCGTGACAAATATTTTGAGAGAATCGAGAAATTCAAGATCTC
ATACAGTAATGATGGAAGCAACTTCCAAATGTACCAAGATGGAACCGGAC
AAGATAAGGTATGATAGAAATCTTTCAAACTAATCTTGAATAATCTAAAT
AAGCTTGAGTTTATCGACCCAGTGATATTTAGAATTTCTAAGTAGCAATG
AACTGACCAAACCAGATTCTGAAGTTTATTTCGAGATCAAGTTACCAAGA
ATAATCATTGTTTTATATCCGCCAAAAACAAAAAGACATATTTCGATAAA
ATTTCAAATGATTTCTTAATTTCGAAATAAAAGATGGATATGTTTTTCTC
TAACCTTTTATCTATATTTTCATCTTCTTTAGCTTTTCGACGGTAATTGT
GATCACGTGACACCAGTCTTGAACCAATTCACCACGCCCATCAAAGCTCG
ATACATCCGATACCATCCATGGAACTGGAACTACCCATGTCTCCGTATGG
AATTGTACGGTTGTTAAGAAAAATTATGAAAAATTATGAAAAACATTGAA
ACATAGAATTATTGTAGAAATCAAACGTGAAATATAAATCTTATTTTTCT
CGAAGTAATACCATTTTTTGAATTTTTTTTGACTTTGAAAGAGATGAATC
TCAAAGCACAATGCCCTATACTAGGAAAGATTCAATATCTTTAGGGTAGG
AAAATCAATAAGCTCACTGGTTCAAAAATGATCCCTGGTCAATTCTTACC
AAACAAAAATACATCAATTTTAATGCACCAGTGAAACAGCAAGACCACAT
GGGTACTGATATTAACTTGATGAGGAGTCTCATTATATATAGTTGTATTA
ATTAAACATTCATTAAGCAAGGTGATAAATACATATGTTTCTCAAATTAA
ATTAACTAGATTTTGAAAAAGATTAGGTCGACCCTGTGTATTTCACATCA
CTAGGATATCTTGTAACCTTGTAAAAGTCCAATGCCAGAAAGAAATACAA
AGTATTCTTAAAAGTATACCCCCTGTTTAATCCAAATTAAAGGTCTTTGG
TTTTGAATATTGTGTTTAAGTCCCAAGGGGCTAGAGAGGAATCCCCTTCC
TCAAACAAGGAAAAGTCCAGCCTCAATATTTGCGCCGCATTACCATTAGG
AATGACGGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045295XLOC_045295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073055-exon-scaffold_86-1575043694:1103393..1103447TCONS_00073055-exon-scaffold_86-1575043694:1103393..1103447Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1101729..1101801TCONS_00073055-exon-scaffold_86-1575043694:1101729..1101801Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1100275..1100472TCONS_00073055-exon-scaffold_86-1575043694:1100275..1100472Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1098703..1098826TCONS_00073055-exon-scaffold_86-1575043694:1098703..1098826Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1097871..1097967TCONS_00073055-exon-scaffold_86-1575043694:1097871..1097967Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1096282..1096350TCONS_00073055-exon-scaffold_86-1575043694:1096282..1096350Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1095661..1095874TCONS_00073055-exon-scaffold_86-1575043694:1095661..1095874Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1094959..1095030TCONS_00073055-exon-scaffold_86-1575043694:1094959..1095030Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1094606..1094722TCONS_00073055-exon-scaffold_86-1575043694:1094606..1094722Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1094055..1094171TCONS_00073055-exon-scaffold_86-1575043694:1094055..1094171Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1093385..1093528TCONS_00073055-exon-scaffold_86-1575043694:1093385..1093528Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1092758..1093000TCONS_00073055-exon-scaffold_86-1575043694:1092758..1093000Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1091975..1092148TCONS_00073055-exon-scaffold_86-1575043694:1091975..1092148Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1091290..1091390TCONS_00073055-exon-scaffold_86-1575043694:1091290..1091390Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1575043694:1090236..1091015TCONS_00073055-exon-scaffold_86-1575043694:1090236..1091015Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1103393..1103447TCONS_00073055-exon-scaffold_86-1510915933:1103393..1103447Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1101729..1101801TCONS_00073055-exon-scaffold_86-1510915933:1101729..1101801Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1100275..1100472TCONS_00073055-exon-scaffold_86-1510915933:1100275..1100472Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1098703..1098826TCONS_00073055-exon-scaffold_86-1510915933:1098703..1098826Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1097871..1097967TCONS_00073055-exon-scaffold_86-1510915933:1097871..1097967Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1096282..1096350TCONS_00073055-exon-scaffold_86-1510915933:1096282..1096350Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1095661..1095874TCONS_00073055-exon-scaffold_86-1510915933:1095661..1095874Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1094959..1095030TCONS_00073055-exon-scaffold_86-1510915933:1094959..1095030Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1094606..1094722TCONS_00073055-exon-scaffold_86-1510915933:1094606..1094722Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1094055..1094171TCONS_00073055-exon-scaffold_86-1510915933:1094055..1094171Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1093385..1093528TCONS_00073055-exon-scaffold_86-1510915933:1093385..1093528Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1092758..1093000TCONS_00073055-exon-scaffold_86-1510915933:1092758..1093000Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1091975..1092148TCONS_00073055-exon-scaffold_86-1510915933:1091975..1092148Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1091290..1091390TCONS_00073055-exon-scaffold_86-1510915933:1091290..1091390Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1510915933:1090236..1091015TCONS_00073055-exon-scaffold_86-1510915933:1090236..1091015Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1103393..1103447TCONS_00073055-exon-scaffold_86-1491911889:1103393..1103447Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1101729..1101801TCONS_00073055-exon-scaffold_86-1491911889:1101729..1101801Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1100275..1100472TCONS_00073055-exon-scaffold_86-1491911889:1100275..1100472Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1098703..1098826TCONS_00073055-exon-scaffold_86-1491911889:1098703..1098826Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1097871..1097967TCONS_00073055-exon-scaffold_86-1491911889:1097871..1097967Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1096282..1096350TCONS_00073055-exon-scaffold_86-1491911889:1096282..1096350Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1095661..1095874TCONS_00073055-exon-scaffold_86-1491911889:1095661..1095874Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1094959..1095030TCONS_00073055-exon-scaffold_86-1491911889:1094959..1095030Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1094606..1094722TCONS_00073055-exon-scaffold_86-1491911889:1094606..1094722Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1094055..1094171TCONS_00073055-exon-scaffold_86-1491911889:1094055..1094171Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1093385..1093528TCONS_00073055-exon-scaffold_86-1491911889:1093385..1093528Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1092758..1093000TCONS_00073055-exon-scaffold_86-1491911889:1092758..1093000Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1091975..1092148TCONS_00073055-exon-scaffold_86-1491911889:1091975..1092148Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1091290..1091390TCONS_00073055-exon-scaffold_86-1491911889:1091290..1091390Clytia hemisphaericaexon
TCONS_00073055-exon-scaffold_86-1491911889:1090236..1091015TCONS_00073055-exon-scaffold_86-1491911889:1090236..1091015Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1090236..1103447 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0019546	0.00526675	0.00191844	0.00188187	0.000846274	0.000569072	0.00748962	0.00222655	0.00189402	0.00137529	0.00396081	0.00618436	2.86377	0.786348	11.844	47.462	12.6293	4.88398	34.2304	32.6813	26.8203	45.7904	52.5839	68.3649	64.4088	70.585	0.00698609	0.00598779	0.018468	0.0875756
Blast
[Close]
BLAST of TCONS_00073055 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.713e-29
Identity = 76/195 (38.97%), Postives = 104/195 (53.33%), Query Frame = 2 
Query:  284 WTNAVIPYVIDCSLENLPDAVDSIKRAMAEWEAKTCIRFVKHTNEKYKLTF-FRDTHCWGNVGMVSYS--RISVGYGCEYQHVMTHEIGHVVGFYHEQNRKDRDQYVTVHWENIGQFKSAFDIVK----NTDSLGVPYDYESIMHYPWNAFSAN-GRNTMTPKQDTRGQTPYVA----LSDLDAKQTSLMYNCPA 832
            W   VIPYVI  +      A+   K+AM  WE  TC+ F++ T+E+  + F +R   C   VG        IS+G  C+   ++ HE+GHVVGF+HE  R DRDQ+VT+  ENI Q    ++ +K       SLG  YD++SIMHY  N FS     +T+ P+QD  G  P +     LS  D  Q   +Y CPA
Sbjct:  159 WPGGVIPYVIGGNFTGSQRAI--FKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENI-QPGQEYNFLKMEAGEVSSLGETYDFDSIMHYARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQARKLYKCPA 350
The following BLAST results are available for this feature:
BLAST of TCONS_00073055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL27.713e-2938.97Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
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