TCONS_00073645 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073645
Unique NameTCONS_00073645
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2474

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073645 ID=TCONS_00073645|Name=TCONS_00073645|organism=Clytia hemisphaerica|type=transcript|length=2474bp
CAtagtaaaatattcaaaattaaaatctcaaaaaatgtcGCAAAATTTCG
TACCATTACGTAATCAACCAAGTACAATTCATACGTCATCAAGAGCCAAT
CAGAACACAGTATCTGCTGATGCCGTCCGAAGTCGTCACGGAATTGAAAT
TGAAGGTGACAATGTACCTGACCCGATATCAAGTTTCGATGAGATGGAGA
TTCCACAAGcgttgaaaatctttttaaaacgtGTCAAGAAAATCTCGAAA
CCTACACCAATTCAAATGCAATCGACAAGTTGTTTACAAAATCAACGTGA
CATCATATGTCTTAGTGCAACAGGCACAGGGAAAACATACGGCTACTTGC
TGCCATTATGTTCGTTCCTATGGAAACGTCACAACAATATTCATCACCAG
GcacaacaaaatcaacaaaCAAGTCAGCCATTATGTCTCATCATTGTACC
AACAAGAGAATTAGTGAACCAAGTGTTAGCCATCACACGAGAATTGTTAT
CAGCTTCTAATATTTTCGTGCAATCATCAAACAACTATGGTCATTCACAA
AACGGGCATTCGACTCCAGGTCCTTCGCACTTCGTCGATAATTCGTCACC
TGTGATTCACCCTCCATTTAATAATACGGGTGGCAGGGTATTACCGAATC
AATGGAATTTCCACCCTCCACGGTCACAATTTATTCAACAACCTATAAAC
ACTACGAACTATAATCAATACCCGCCCTACACACCGCCTCAACGACCACC
CTATCATCAACAAATGTCTAATATGACCAATAATGTCGGATATGCATACG
AACCTCAATTTACGAATGCCAACCAACAATACGCTAACATCGAAAAGATT
GTGGAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGATGA
CGTTACACGACTCAATATTGATCAACCTATAGTTGTTATAGCAACTCCAG
GTCGTCTCTTAGACCTATGTTCAAGGAACGTGTTGAGTCTTGATGGAGTG
AGATATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATGGA
GGAACAATTGAGACAAATTGTTGCCAAGATGACAATCAACTCCAACCATG
ATGATATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCGTTAGAA
AGAATCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGCGGTAT
CAAAAATTCCGTCCCACGTAACATCCAACAAGACGTACGTTTCCTACATA
CGTATCAGAAACGTGAAGTCTTATTAGACGTTTTACGTCAAATTCCGTAC
CCGCCCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgacgtcac
tgaATTTTTACAAGGTGAACAGTTTCACGCAGCTGCGTTGCATTCTGGGT
ACCCACAAGACTACCGTAATAACGTGATAACGTCTTTCCGTAGCGACGAG
ATTGATATTTTAGTTGCGACTGACTTAGCGAGCCGTGGTCTTGATGTCCC
AACTATAACACACATTATTAATTATGATACACCTGATACTATAGAGGATT
ATATACATCGTGTCGGGCGGACAGGACGTTTCGGTCGCGCGGGTAACGTG
ACTACTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAAGAACT
TTTGGAATGTTCGAATTGTGACGTCCCTCTTCAGTTGAGGGATGCGAAAA
TGTTTGGGCAAAAAGTACTTCATACGGAGATGGGCGATCGTTTCGCGTGA
TGGAAAAAGATAACATTTTTTTAAGAAACGTGATTCCAGCTCAGCAAGGT
CATCCAAAGCAGATTCACTTTATCAAGCACTTCAAGTTTTTCTAAAGGAA
ACAAGTAACTAATCCAATCGATCATCATGAATGTTTTATGGGCTATCATT
TGGTTCCTTGTTCTCATTTTCATCGGATGGCCAATTTCTGGATTCTGTGC
ATCTTGGTACGTCTGTTGTCTCCCATTCGAAGTCTGTATTGAACCTATCA
AACAATTGAATGAGATGTTATTTAAAGGTGTGAAATTATGTTATGAGGTT
GCTGTTCATATGAAGGAAGGGAAATCTGGATGGTAAATTCTTCATTGTCT
CGGTTATACATTTCTATATGTGTAACCAAAAACttgattttaactttttt
ttgacttatgGTTTCTTGATTGCCATTCACATAACCTTCGGCATCAATAT
TCTTTTGGTGGATACTTGGAACTGAGTGCAATCATTAACATTGACATGTG
ATCCAGTTTATCTTATTAACCAAACTCTCCAATATGGTATATATAGATTT
TATGATTATTTTACATCTATTTATATATAatcttttgtttacattttttt
gacattttctttgttaaaCTGTACAATTGACTTAAACTAGGTATCTTATA
ATAGTAAGAAACATTTTATGTTAATCCAAATAAATTCTTATATCCTTACC
GTCTTTGAAATGTTTTAGACGAAA
Run BLAST on NCBI

protein sequence of TCONS_00073645-protein

>TCONS_00073645-protein ID=TCONS_00073645-protein|Name=TCONS_00073645-protein|organism=Clytia hemisphaerica|type=polypeptide|length=582bp
IVKYSKLKSQKMSQNFVPLRNQPSTIHTSSRANQNTVSADAVRSRHGIEI
EGDNVPDPISSFDEMEIPQALKIFLKRVKKISKPTPIQMQSTSCLQNQRD
IICLSATGTGKTYGYLLPLCSFLWKRHNNIHHQAQQNQQTSQPLCLIIVP
TRELVNQVLAITRELLSASNIFVQSSNNYGHSQNGHSTPGPSHFVDNSSP
VIHPPFNNTGGRVLPNQWNFHPPRSQFIQQPINTTNYNQYPPYTPPQRPP
YHQQMSNMTNNVGYAYEPQFTNANQQYANIEKIVEQKIIGLCGGTPVHDD
VTRLNIDQPIVVIATPGRLLDLCSRNVLSLDGVRYFVIDECDRILDMGME
EQLRQIVAKMTINSNHDDIRTSLWSATLPESLERIARSAVIHPIYVCCGI
KNSVPRNIQQDVRFLHTYQKREVLLDVLRQIPYPPVLVFTSSKDKVDDVT
EFLQGEQFHAAALHSGYPQDYRNNVITSFRSDEIDILVATDLASRGLDVP
TITHIINYDTPDTIEDYIHRVGRTGRFGRAGNVTTFLTLDCKIANELKEL
LECSNCDVPLQLRDAKMFGQKVLHTEMGDRFA
Run BLAST on NCBI

transcript from alignment at scaffold_97:125959..144668+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073645 ID=TCONS_00073645|Name=TCONS_00073645|organism=Clytia hemisphaerica|type=transcript|length=18710bp|location=Sequence derived from alignment at scaffold_97:125959..144668+ (Clytia hemisphaerica)
CAtagtaaaatattcaaaattaaaatctcaaaaaatgtcGCAAAATTTCG
TACCATTACGTAATCAACCAAGTACAATTCATACGTCATCAAGAGCCAAT
CAGAACACAGTATCTGCTGATGCCGTCCGAAGTCGTCACGGAATTGAAAT
TGAAGGTAAAAGCTACTTCGTAGTTGGTACAGcggactctcgctaattca
aaTTTCTATCATTCGAATCAACTTATTCTCGACTCCCTTTTAGAGAAATC
TCCTTAAAAtattctctataattcgaatctttctggaATGTCGAACAAAT
TAGACTTGATGGGGCAGTCTGTTGTTGACCTCTCGGACGAagaaatctaa
gaaaaaagactgtttttccaaatcttcGGTCGAGGCAAACTTTTGGAATG
TATCAATACATACGTTGGATAAACCCTTCATTTCACTtttaaagtaaaag
attttttcgtGTTTTGTTAAGTAATGCCATTAtgaaagcaaacgttcgaa
tctgtaaaggcgaaatcgaacgtttgcttccataatggtggacgTTACGT
AActtagaaaaatatcaaaaattctaTAGTTTTGGAGCTAAATGATATGC
ATCCTTAAGGTATTCTACctcatttttctttgtttcttagGTGACAATGT
ACCTGACCCGATATCAAGTTTCGATGAGATGGAGATTCCACAAGcgttga
aaatctttttaaaacgtGTCAAGAAAATCTCGAAACCTACACCAATTCAA
ATGCAATCGACAAGTACGTATCAGTTGATTATTCTGCAATGCTTAAGTCT
AAAGTCTGTCTAAAAATAATCTGTAGTGGAAATAAAAAAggttataactt
ttgatagagttcCACTTATAAAAAGAACACTTCTAAAAAGGTTGGATTTC
TTCTTAttcgtttttcatcttcatttttcaattttttcttatttgttcTC
TTTTTGGTAATATTCAACTCTGGAAtataacgagcacaaaatcgctatCT
TATTCTTATTATATCAAAAGTGATAGCTTAATAgtgcttttcataaatta
tgtcacgaacatcacttgcctcgttttgaaattattgccatggtgattaa
ctcccagcggattttattaaaactactttttattcataaaagaataattt
aacgtctcaagggacataatcaccatggcaattgtttgaatacgaggcaa
gtgatgttcgtgacgtaatttatgaaaaggtctattattttcagaaaatc
tttAGGAAACCTTTCGATACCCAACTACAAGATAAATCCTGGGAAGGAGC
TTAAATTGACTGTTCAGCCCAATTATTATACCTAACAGGACTGGGGAGAC
TATTTAATCCAGTAGGGAATGAAACTTTCAGTTTTTAATGGTTTCGAATC
TCAAATTAAATTGTAATGCTTTTTGCAGTAGGGATAAGGGTTGGGTTCAT
TTTGGCAAAGGGGTGTGAGGGGTTTTTTCCACCTCATTTGGTGCAACCCT
ACATCCAGTGGCtcgacatttttttgttttctcccTTTCTAGTCCTAATC
AAAGCCcaataaacaaaatctttcatttgtaaaatattttctcgTTCCAT
CTAGGTTGTTTACAAAATCAACGTGACATCATATGTCTTAGTGCAACAGG
CACAGGGAAAACATACGGCTACTTGCTGCCATTATGTTCGTTCCTATGGA
AACGTCACAACAATATTCATCACCAGGcacaacaaaatcaacaaaCAAGT
CAGCCATTATGTCTCATCATTGTACCAACAAGAGAATTAGTGAACCAAGT
GTTAGCCATCACACGAGAATTGTTATCAGCTTCTAATATTTTCGTGCAAT
CATCAAACAACTATGGTCATTCACAAAACGGGCATTCGACTCCAGGTCCT
TCGCACTTCGTCGATAATTCGTCACCTGTGATTCACCCTCCATTTAATAA
TACGGGTGGCAGGGTATTACCGAATCAATGGAATTTCCACCCTCCACGGT
CACAATTTATTCAACAACCTATAAACACTACGAACTATAATCAATACCCG
CCCTACACACCGCCTCAACGACCACCCTATCATCAACAAATGTCTAATAT
GACCAATAATGTCGGATATGCATACGAACCTCAATTTACGAATGCCAACC
AACAATACGCTAACATCGAAAAGATTGTGGAGCAAAAAATAATAGGACTC
TGTGGTGGAACACCAGTACATGATGACGTTACACGACTCAATATTGATCA
ACCTATAGTTGTTATAGCAACTCCAGGTCGTCTCTTAGACCTATGTTCAA
GGAACGTGTTGAGTCTTGATGGAGTGAGATATTTTGTGATTGATGAATGC
GATCGGATACTTGATATGGGAATGGAGGAACAATTGAGACAAATTGTTGC
CAAGGTTCGTCTGCTCAATATTACACTGCAGTCTCAAGAACTCGAACCCT
TATTtaatctgaatcgcagacctctatagatatacttcctataagaaact
tttttcgctagaggatgagcagaagcctaacccttattatcttaggttcc
aaataaacggaaCCAGCTtgttaattttcgaaaattttccaaccctacgg
accttattaggaccccctcccccgtttattaaattttaagaatattttca
gctgtcaaagagaaggcccctattttttctctaaatagcctgattttagc
ctatatttaccttattttggggttttcagaagtacaatgccccccggcaa
ttaggcccccTGTTTATTTAGAACCTAAGAGTGTTCTTATGTCTCATTAA
TTCTTTCTTATCCCTTCAGTTAGCTATGCCAAACCTTACTTCATAACTCG
AGATTTCAATAAATCAAGCAAATTAGTGTTTCCAGTGCGTGTTCGAGTTG
TCTCAAGTTTGTGCTTAATATATTTCCAATATCTTATACCGCATTTACGA
GTAGCAATCCAAAATTTCGCTCAACAATCAAGTAAAAATTTATCCGAATA
ATTCGAGAGACGAACCAAGCTGTAGCTGGCCCCTCAAAAAAGACTcttaa
aaaagtcatttaaCAGCCATATGATATTTTTTAAGGTAAAAACTAAATTC
CACCAGACTAAAATAACTCATCATTAGAAAAAGAAGTTCCTTCTGTGCCT
GAAATAGGGATGTGTTGCGCGCTTTTTAGcctttgtttttttgttgattc
TCAGATGACAATCAACTCCAACCATGATGATATCCGTACAAGCTTGTGGT
CAGCGACTCTTCCCGAATCGTTAGAAAGAATCGCACGATCCGCGGTCATA
CATCCAATCTACGTCTGTTGCGGTATCAAAAATTCCGTCCCACGTAACAT
CCAACAAGACGTACGTTTCCTACATACGTATCAGAAACGTGAAGTCTTAT
TAGACGTTTTACGTCAAATTCCGTACCCGCCCGTTCTGGTTTTCACGTCG
TCAAAAGATaaagttgatgacgtcactgaATTTTTACAAGGTGAACAGTT
TCACGCAGCTGCGTTGCATTCTGGGTACCCACAAGACTACCGTAATAACG
TGATAACGTCTTTCCGTAGCGACGAGATTGATATTTTAGTTGCGACTGAC
TTAGCGAGCCGTGGTCTTGATGTCCCAACTATAACACACATTATTAATTA
TGATACACCTGATACTATAGAGGATTATATACATCGTGTCGGGCGGACAG
GACGTTTCGGTCGCGCGGGTAACGTGACTACTTTTTTGACTCTTGATTGT
AAGATTGCGAACGAGTTGAAAGAACTTTTGGAATGTTCGAATTGTGACGT
CCCTCTTCAGTTGAGGGATGCGAAAATGTTTGGGCAAAAAGTACTTCATA
CGGAGATGGGCGATCGTTTCGCGTGATGGAAAAAGATAACATTTTTTTAA
Ggtaattttagcttttttgtcttaaaaactttttcgagattttacaacta
cactcttttttttcttcgagATTCGATATGGTTAGCAAAATCTCATTCTT
TTCAGCCTCAATTTATGCACATTTATATGCGTACTTCGATTTCGATTTGT
TCTTCGAGTTGATCTTATttggtttcatgaaaatttcgaattttttaagt
CGGAAAATTCTTTCGactcaaaatatgaaattttgtttgtaatttggcgc
cgcaggtgaaaatctttggtctaagaaagctCAAACAGCTTTATAAGTAA
CCCTAAAAAGATCAGTGTTTTAGAAAAGCTTCAcggtttttttgcatttc
agcttggaggtatgcttagcattatgcttgatttttaccgaatttgagtc
taagtatgcttataaacgttatgcttacaaaaaagaGTGTAACGGGTATT
CCTCTATGACTCTTATGTAAAAAAGTATGACTTTAAAAAgtgtattttac
aaaaaagttgacAATAGACTTGCGAGTCTGGCATTTTGTGAAATTTCGCG
TCTCGTTTACGCAAATCTTTTTTTCCGTGAACGGTCGGAAGATTCCTTTT
CGGGgactttgaaattttagcgcTTTCAGCTCGGTCGGaaaattcttctt
cttcttgcgTTAGACTGTGATTtaaccgagtttatgtatcggaggatatc
gagggcgacggtgagtgaaatcgatacaaaaaaaagtcgatagttgatga
acggctctatatcgcctttgctcacctaaacagacgacggtatcttggtg
tttttaccgtcatcgagcaaagtggacggcgatttcgaccccatgtcagc
tttgctttataccgtccccctcgatttatctcgaatacataaactcgctt
ttgTCTGACATAGCGAGGCCAAAATACGCTAAAAAGATTGTAAACAATCA
ACATGGCGGAATCAGAAACTATCAGAAAAGTTTCTGGAATATGCCGACCA
TGAAGGAATCTTCCGACCGTTCACGGAAAAAGAATTCGCGTCTCGTTTAC
GTTGATTGGAATTACAATCCtctaaattttatcaaatttggttCTTACCT
CAACAAATGGTAAACCTGTTTTTATGCTTTAGAATAAATTATAGCACAAA
Ttgttgaagaagttgattttcttattcttcaattttaatcttcatttttc
gatcttttttgaattattttttttgatattattcCACTCCAGATTATCTT
TTTTAACAAAACCGCTATCTTGTCTctgctgcaaattatattgagacaaa
tttaataagaaattttgacgTTGGTGAACATTTTGATTTGTCTGATAACT
ATTTTGTTCAATGATATTCTTTTCAATTCCGAAAAGATTCTTATTCTTCC
ATCTATAACACGCATGCACTCCAGAGTAGATCAATACGGAAAATTGGGTT
GCTTTAGTCCAAAAAACGGAAATTATAAGCAGAAAAATTGGCACAAATCA
TTCACAATTTCCGGAATTATTGGCggaaactcaaaatttaaaataaattt
tcagtggTTAGCTCTCGTCTAGACGTACTGCGAGTTTCACAGCTTTGTTT
TCTGTTAGATGTAACCTGTGATAGTGGATCATAACAATTAGAAATTCCAG
TGAATCCTTGAGATTTTCGCCGCAATCATTAAGGATTAAATCTAGTGGAA
TCTTTATGTCTTCGTGGCATTAACGTGGTGGGTCGACAAAAATCTgggca
aactggggaggcaatttttAGTAGATTTTGTTTTTGGCGTCCCTATGAAA
TGTAAAGTAAATATTTAGtactttctctctttttggcccagaactgccat
atctaaggtgtaaaagagcaaaaggggcgccgaaattagtgattagaggc
gtctttttgtaccctttgtatttcggcgcccctttgAAAAActtccgctg
ggggggggggcatctGACCTCcttgccaccacgctactgcttCGTGGTAC
ATTTCTGAAAGTTGGTGATAGATTCTGCTTTCATTCCAGCGATTGCTTAA
AAAACTAAGCGGGTCATGTGATTTTGGATTTCTTCCGCCCTTTGATACAC
CCCTGTCCCACAGCCCTGGGGGAACTTTTTCCCCCGTGCcgagataaatt
ttttttatggaaattcgAGTGGGGATACGCAACAGCAGAAATACTTTgtt
aaaagctaaaaaaaatcaGTGCGTCATAGGGATGACTTTGGAGTTGAATT
TTTCAGTTGAATTTTAAATGAGgatgaaaaaaattgcactccaaaatcaA
CGGTGCACTATGTTCTTTCAGCTttgaacaaaaaagttaatgtgccagta
gggctgaaattttagtgtatttttccACCATCGACGAAATATAGACAAAA
TTATCCAGtccacacgttttttttataagaataagcttcaaaattttgga
tgttcttataaaataaaacttgaattgCTATTTGGTCTGTGACAGAGGGG
TGTATAAATTTATTCTTAAACTGACAGAAAAAGGGGAAACAACGCGCGAC
CAGCGAAAAGAAAAGTaggaaatttgagaaaataatgaATGAAAAACTAT
AgtagaacatttttgaaataacAAACGTTATAAACAATACTGATTGGGCG
CTAAAAAGGTGAGTGAAACACACTCCATCGTTGGGGTTAATGAAATTTAC
TCTGCTTGAAATCGAGAAGAATAATTTGCACAAAGACCAAAAGAGAGGag
ctaaacgttttttttataagaacaaaactaTAGAAGATTAAACTTGAGGT
TTCGAttaccaaaatgttaagaacaagttaagaacactttgAGGCTTCTC
GGACccgaaaacacccaatttcttaggaaaatggacaaaattactcaaaa
aatggcgaaaataagaacacgccAAGAACAATTATAGGtttaaaactcga
aaagttaagaacatccgaaagcttcaaaaattttggatgttcttattaaa
aaacgtgtacagggCTCCAAACGTAGACCAAGTGAGGCGACCACTgtatg
gggggggggtttgtaggggttcgaaataccgttttcccgtcaaaattttt
gctgaatcccggaatcccgaaaattgaaaaaataataacaccgNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaggca
aatgcaaaattaagcctttcccccaataatttcttcctcgcagacccgta
agatgtcttttatattgagaattaattcaaaatcgaggtttgggccaatG
ATGGTCTGAGAAGtcgtagacttcaacacaggcatcatagaggtggtgct
gtggtgcaactagaggacgCGAATTCTAAAGATGAACTCCCCCCTATGGG
AGGGAATAAAATAATAGGAAAAtaagaacgcgagcgaagcgagcgcgaaa
atttttcgacaattattgaaaaacggccttaatacgctattgttagccaa
gtatgccttgtttggtcacacaatttttgattttatttaacactgaccat
ttgttagCAAAAATATGGTAACGCGAGCGACGTACCTaccgtacccggtg
cggcgttccaagaaTTTTGCcctagaaaaaatttaaaatttaaaatttag
aatgcctatgtattgtattgtagtagcaatNgtcacactttcttagagaa
agcgcaagttccgaagtttggtttttattttagtaagtgaggacagcgct
aaattcaaatttcccactgtaaattttttgaggcagaaatctgcctcGCA
GCTCGTGCCCGTCGTATAGGGGCCCCCTGTATCTCTTGCTACCATTTCCA
CAATTTCCATTAGGAATTTttgattcttatgaaaaatcagATTTTACCGA
CAAacgaaatgtttttttattgaacATCATACCAGCTGAAggggggggtt
ttcaggggtcttaaataccgtcataccgacaaaattttgggtcatatacc
gtaataccgtcggtgaaggaagcctaataccgataccgataNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtagtgctgacggagaaaattttatctagactcaatgcagaaaaata
actaaaatatttgtttagatatcgcaAAGTTtaacttattttgaataacc
tcatcatgacaataagtcaataggaaatccaagattgtgcgagcgaagcg
agcaagaaaattttactggttaaaatagcggtATAGActcatcttttttg
aaaatttttctacatgaaactcatgaagaaactaaaaggtaaatagtttt
ataccgaaataccgttttttattgataaaaatatcgaaataccgacaaaa
aaacaggcaatttaccgataccggtagaaaatgaaataccgtaatcccgt
cgtttttttctcgtaataccgatttaccgggagtaaaaaggcccaatacc
gtcataccgtaaaagtgaaaacccccccccgCTGAATGAATACAATTCAT
CAAAAAGGTGATAAAAGGCCTATTTAATAAATAGTTGTTTCAAAGCTCTA
TAGCCATATTTCGATTCAttcttatttttatcaaaaagggGGGACGCAGG
CTTAggagatttttctttttctaagaaAGTTGTAGGAAAATTTTATGTGA
TATCGGAGATAAGCCGTTCCCAAGCAGCCGTTCTTGTCCTCCGATTAGGT
GTAACGAATTTTAATTTCCAGATCATTAGTATCAATTAACTCAATTAACT
CTAATGAAAAATTCAATCTGTTTTATTAAAAGTTAAATTTGAAATGGTTG
CAATTGAACTGTCATAGTTGAGATAACAAAAgcttatatgttcttataaa
aaaagatccACTCGAAGCACTGCGGTGGAGTTCAATCTCATGAGaccaca
tttaaaaaaaaacataaaaacatattATGTTACCGTTGGTGTAATAACAA
AAGCTAATCTATTGTTATCTACGACTAAGCGCCCGGGTTTTTCGTTGAGT
TGAAAACATACAATATATATAAAAGTAGGTGTGTGCTTTTTATAGTAGAG
ACGACTTCATAAAATAACTTTTCGTATTATTTTTTGCATTCAGAAACGTG
ATTCCAGCTCAGCAAGGTCATCCAAAGCAGATTCACTTTATCAAGCACTT
CAAGTTTTTCTAAAGGTATGTTTATATTTCTATTTTGATTATGGTGTCAA
ctgtcaaattttgatttttatgttcgTTTATATTGTTATTCTTGTATACT
TTTAACTCCTACATTGATAAATCTATGAAAAAGGGGGGAAAAGTGCTACT
TTTCAGGTCTTTGTGGTTTATGAGAAAATCTTTACTTTCAAGAGGTATTT
TTAGTTTCTCTTCCAAAAATCTAAACGAAGCAAAAGATaattattttaat
tcttttttatctAACTATGTTTTAGCgaatttattgttttaaaaaccCTG
TGTCAGTCTATATTCTATGGGATAGCAACTAATTTCGTTCAGAGTGTCCT
CgaacaaccctgtctcacagccccggtgtgGAACTTCTTCCCACAGTGTG
GGAATGAAGATTGAAATTGTATTGCTCTCAGGTTAAAAATCCAatggaat
ggttttggagtgcaatttttaattcaatgtTCCAGTGGTGCTGAAATTAT
AGGGTATTTTCCCTCACTTTTCCTACCGAaaacaaattttgaccaaattt
ttcaGTGTTAGGGTgataccgggtctgtgacatagACACGTGTCTTTGAG
GTCAAACCTGTATAATGAAGTCTGGCCACTTCACTGAAAAACTAACTTGC
TAGCCACGAATACAATCATTTAcccctctttaaaaaaaattatactaaaa
gtctattcacgataagtgtgcactcttatttcttttacctataacttttg
aaaggaattcttcaatatttataaatttggtatcgttggagagatatttg
tgagtggaacaattttaaataaaaaaatctttaaaaaattctaaaaataa
agatgaaaatgaataagaaaaaaatgaaaatcttgtagaaaagtgctata
actttcattttcactggcgagattctttgatcttaggaggtcatcactgt
gaagaaatttcattaaaatatttattcaatataaagttatgatacaaagt
taataagtgattgaccccaaaaaaactgcagaaaacagcgtttttagacg
tcaatggCAGCTATAACTTTGTttaatatcttttgactgaatgattattt
ttgagaatttattttacagtgatgacgttcgatgatcaaggattcaatga
aaatgatagttatagcacttttctacaagatcgtcatttttttcttcttc
attttcatcttcatttttagatttttttatttcaaattgttccactcact
aatatctttccaatgataccaaatttataaatattgaagaattccttcaa
aagtaataggtaaaagaaaaaagagtgcacacttatcgtgaatagacttt
agtattTTATACTATTTACAACCTAACATTTAAAATTTCTACATTAAATa
aatatttgtgttttttgtttacaactAAGTAAGAAAAACTGGTTTAAGGC
TGTGATGTTTCTACTTGCAGTTTTGGCGAACTTTTTTTACACGAGCTCTG
CAGCCAGGATCtgtcttttattagaacaatgacgcttaaaatttcaaaaa
taccaaAGATTAAAAAACAACACTGGAACGAATggatttttaccaaatta
aGAAATAAAGTAGTTATAATAGGGTTTAATCTAAagcgttctttaaaaaa
agtaatgtAAGACTGACAGATGTATCATTGACAGCAACAGAATTTATTGA
TCTTGCCAAAAAAATTAACGAAACACGATTTAATGTAAGCTCTACTTTGA
TATTTGCatgattttgcatgatattgtcgatttagagtagtctgaaaatt
taagaacgcatctaagaacatttcaggctgaaaattgctaaaaataagca
catccaggctcagccaaattttaggtgttctaataaaaaaaaaacgtgta
aatagAATTCTTAAAATCTCTTGGCTATAtctttcataattttttctgCC
AGGtcatatttttgtcattttttgtagacattttaaagctttacgAGGTT
TATGCGCACCCTTCATTCATAAGTTTAAAAAGTGGTTGATTAAAAtcttt
cataattttttctgCCAGGtcatatttttgtcatttttttgtagacattt
taaagctttatgAGGTTTATGCACCACCCTTCATTCATAAGTTTAAAAGT
GGTTATGATTAAAATCTTATCCTCAGGAATGCTAGACAAGAGACCCGTCC
TGTTTTTTTCATAATCTGATGTAAACAGGACGGGTATGTCCTATGAGGCa
tatttctgcctcaaaaaatttacagtggaaaattcgaatttagcgttgtt
ctcacttactaaaataaaaaccaaatttcggaagttacgctttctctaag
aaagtgtgaccagtaaaagaatagcaaaatttgattggttatgttttcaa
ccgttattaggatctggaaaattcaaactctcagcccataccatgctata
tatttagCCATCagtcagtatatagaataagacatcatagcatggatctc
caggctacagGAATGCAAGATAAAATTTATGTACATATTGCTTTGGGCTT
TGAAAAGAGaaatgcttgttttttttcagatcaGGCTTCGcaactcaaat
tttttttaatagttGCTGAAAATTTGGGTACCAATTACCAGGTTTTTAAA
TCTAAGAATTAAATAATTTGGTATTTTagagtcctcaaagccttaaaaac
tttaaactggttcttgatattttggtaatcgccttatgttctcatatttt
gttcttataaaaaacgcgtTTGGACGGTACTCGGGAATTGTGGTATGCAC
AGCTTGAGATGCAAAAATGGTTTCTtacgttttttaaaagaacatacATA
AACCTTTAGATTCGAAaagtaacaaaacaaaattGGTGATCATTTTTAAA
ATACGTTTATTTCTCTACTGGCATTGATATTTACAAGCCAAATGACTAAT
CCCCACTTCGAAACCTTATTAAAGATATTGTCGTTGTTATGCAAGCTTTC
GTAGCCATAGCAATATAAAAAGCGCTATAAAGTCTACTCCCTTTGTTAGA
GTTAATATGCGACAGCCTGCTGCTAATTATTGATAATTATCTTATAATTG
GCTTATTATTCTATATAGGTACATGCTTATTAAATCGAAGTggttttgtt
ttctatttaattTCATTAAGTATGCAATTAAAAGCTATTCCCCTGTCTAA
TATTCTTTGATGCTTGTTTTGACAAAAGTTTTGACACTTAATGTCTTTCT
AAAAACATTAGCATTTTAGCCGTTTTCTTTGGTGGTGgatattttttgag
ttttgaaagCCCGAAAGGCTTGAGAGGGAACATTTCTTAACTAAGAATAA
GGGAAGCCTTTAAGGTTTATGTAGATTTTAGAatgatggattgaatctag
cgccTTTGTTATTACGCGGCttgcttttttcgaaatctggcgatgaattt
tactttcaatactCAAGTTACGCACTACATGGGGACACTCGGATGGGGGA
ATAAGAGGCTTCATTTCCCAACCAATCCAATTCATCTCTACCTCCGACGG
GGCTTTAAACACAAAGAtggtacaagtttttttataagaacagccaaaat
ttttgaagccttagaatattcttaagtttttgagtttaagcctaaaaatg
ttcttagaatgttcttattttgaccattttgtgaatatttttgtgcaatt
tccttaGAAAAAGGGTGTTTTTTGAGACCAAAgtcctaaaatgttcttaa
cattttgcccatcgaagtcttatgttcttatatagtttgttataAGTGTT
TTATAGTGTGTCCCCTACAACAAAAACTTTCTTGGTTTGGCTTACATGCC
CAGAAAGATGACCGGTGTCCAGATAAGTccatgagacaggggtgtgtaat
AGAAATATTTATCTGATTATTGATGATATACTTAGGGGGGAGACTTTAAC
TATGTGCATGGCAAATAGAACTAAAATCTGACATCTGCATGTATTTTCTT
GCAgagatatacacgttttttgataagaataaacaatataagaacataag
acttcgatgtccaaaatactaaaaacattttaaggtttaattgcggactc
gaaaacacccgattcttttggaaaatgggtcaaaatggtcacaaaatgga
gaagataataatatttttaggctaaaacaaaagttaagaacatccgaagg
cttcaaaaattttggatgttcttataaaaagtcaaAGTGTAGTCAAATTG
CTAAGCTTGCTCGCAATATTTGTATTGAGCAAagcttacacgtttttata
agatcaAATTATGTAAGAACGTAAAGTTTTCGATGGCCAAAACATTTAGA
ACAGTTAGGCTTTAAGATTCAATTTCTAAGGAAATTGCACATTGCTGAAA
ATGATAACAATTGTTAGCttgaaacttaaaaagttaaatcttaaatacat
tcaaatcttggaaaaaaatttggacgttcttataaataaaatgtgTAGAT
CAATTGACGGTTTGAAGTAAACAACTGTTCTTTTACTGATTTTATTTGCC
TCAAAAAATGTATAATCAGATATTAAAAACCGCAACAATTTAATCAAATA
GACTAGATGAATGATATGATATTAAAAACCGCAACAATTTTATCAATTCT
GAGATTCATTTGATTTATTATCTTGAAGGATGATACGATTATGCTTTTCT
AAGACACTTTTTCTATGTCTATTTTCAAGGGTTTTTACTGTGAATGtgtt
tttttggtaattttagtgctttgtgtgtgtgtgacaatttgaaaattttg
tgagtCAAGGTTAAAGAGGTTATTTAGTATATCAGAGCTAAAGActggat
ttcaaaaattttgtccctTTGACGTTTTTATGACCTCACGAGAGTATTTc
catagatttttaaaaaccgaagggctagatggcgtgctttaagctcttcc
aagcaaaaaatattgctgcttttgttttcaaaaaacctgcgaagcttctg
attggtcagtcacttgacttaggtaggatttcctacctaacctcggcaca
cttttcagcaaaagcactctatctagtccttcgggcttcgGGCTAAATCT
ATGAGTATTTCCATAGTTTTCATGCAAAGTTTTCAAACGTAAATCCAAAT
TATGAGATTGTATGACCTTCTAAGGGAGTcaatttttttgggaccctttc
agagacttaATTGCCAATTTATGATTTCTGCACCGCTGTGAGACACTTTG
AGGTTGTTAAAAGGACCATCATAACTCACGCATACCCGACACCTATTTTG
TCTAAACACCCCCCTCTCTGAATGGGACTCACAGGTGTGACAATAACGTA
GCAAACATTCccgtgcacgtttttttatataagaacacaatgttttgatg
gccaaaatgttaagaacattttaagactatgtAAACACCCTATTTCACag
gaaaacggacaaaaatactcaaaaaaaggtgaaaataagaatatgttaag
aacattttaggcttaaaactcaaaaggttaagaacatcccaaggcttcaa
aatttttggatgttcttataaaaaacctgcACTTTGACTAAggctgtttt
tataaaaaaccttTATTCTTTTTACNttttcgatggccaaaaaattTAGA
ACAGTTAGGCTTTAAGATTCAATTTCTAAGGAAATTGCACATTGCTGAAA
ATGATAACAATTGTTAGCttgaaacttaaaaagttaaatcttaaatacat
tcaaatcttggaaaaaaatttggacgttcttataaataaaatgtgTAGAT
CAATTGACGGTTTGAAGTAAACAACTGTTCTTTTACTGATTTTATTTGCC
TCAAAAAATGTATAATCAGATATTAAAAACCGCAACAATTTAATCAAATA
GACTAGATGAATGATATGATATTAAAAACCGCAACAATTTTATCAATTCT
GAGATTCATTTGATTTATTATCTTGAAGGATGATACGATTATGCTTTTCT
AAGACACTTTTTCTATGTCTATTTTCAAGGGTTTTTACTGTGAATGtgtt
tttttggtaattttagtgctttgtgtgtgtgtgacaatttgaaaattttg
tgagtCAAGGTTAAAGAGGTTATTTAGTATATCAGAGCTAAAGActggat
ttcaaaaattttgtccctTTGACGTTTTTATGACCTCACGAGAGTATTTc
catagatttttaaaaaccgaagggctagatggcgtgctttaagctcttcc
aagcaaaaaatattgctgcttttgttttcaaaaaacctgcgaagcttctg
attggtcagtcacttgacttaggtaggatttcctacctaacctcggcaca
cttttcagcaaaagcactctatctagtccttcgggcttcgGGCTAAATCT
ATGAGTATTTCCATAGTTTTCATGCAAAGTTTTCAAACGTAAATCCAAAT
TATGAGATTGTATGACCTTCTAAGGGAGTcaatttttttgggaccctttc
agagacttaATTGCCAATTTATGATTTCTGCACCGCTGTGAGACACTTTG
AGGTTGTTAAAAGGACCATCATAACTCACGCATACCCGACACCTATTTTG
TCTAAACACCCCCCTCTCTGAATGGGACTCACAGGTGTGACAATAACGTA
GCAAACATTCccgtgcacgtttttttatataagaacacaatgttttgatg
gccaaaatgttaagaacattttaagactatgtAAACACCCTATTTCACag
gaaaacggacaaaaatactcaaaaaaaggtgaaaataagaatatgttaag
aacattttaggcttaaaactcaaaaggttaagaacatcccaaggcttcaa
aatttttggatgttcttataaaaaacctgcACTTTGACTAAggctgtttt
tataaaaaaccttTATTCTTTTTACCTCTCCAGGAAACAAGTAACTAATC
CAATCGATCATCATGAATGTTTTATGGGCTATCATTTGGTTCCTTGTTCT
CATTTTCATCGGATGGCCAATTTCTGGATTCTGTGCATCTTGGTACGTCT
GTTGTCTCCCATTCGAAGTCTGTATTGAACCTATCAAACAATTGAATGAG
ATGTTATTTAAAGGTGTGAAATTATGTTATGAGGTTGCTGTTCATATGAA
GGAAGGGAAATCTGGATGGTAAATTCTTCATTGTCTCGGTTATACATTTC
TATATGTGTAACCAAAAACttgattttaacttttttttgacttatgGTTT
CTTGATTGCCATTCACATAACCTTCGGCATCAATATTCTTTTGGTGGATA
CTTGGAACTGAGTGCAATCATTAACATTGACATGTGATCCAGTTTATCTT
ATTAACCAAACTCTCCAATATGGTATATATAGATTTTATGATTATTTTAC
ATCTATTTATATATAatcttttgtttacatttttttgacattttctttgt
taaaCTGTACAATTGACTTAAACTAGGTATCTTATAATAGTAAGAAACAT
TTTATGTTAATCCAAATAAATTCTTATATCCTTACCGTCTTTGAAATGTT
TTAGACGAAA

Coding sequence (CDS) from alignment at scaffold_97:125959..144668+

>TCONS_00073645 ID=TCONS_00073645|Name=TCONS_00073645|organism=Clytia hemisphaerica|type=CDS|length=6996bp|location=Sequence derived from alignment at scaffold_97:125959..144668+ (Clytia hemisphaerica)
AtagtaaaatattcaaaattaaaatctcaaaaaatgtcGCAAAATTTCGT
ACCATTACGTAATCAACCAAGTACAATTCATACGTCATCAAGAGCCAATC
AGAACACAGTATCTGCTGATGCCGTCCGAAGTCGTCACGGAATTGAAATT
GAAGGTGACAATGTACCTGACCCGATATCAAGTTTCGATGAGATGGAGAT
TCCACAAGcgttgaaaatctttttaaaacgtGTCAAGAAAATCTCGAAAC
CTACACCAATTCAAATGCAATCGACAAGTTGTTTACAAAATCAACGTGAC
ATCATATGTCTTAGTGCAACAGGCACAGGGAAAACATACGGCTACTTGCT
GCCATTATGTTCGTTCCTATGGAAACGTCACAACAATATTCATCACCAGG
cacaacaaaatcaacaaaCAAGTCAGCCATTATGTCTCATCATTGTACCA
ACAAGAGAATTAGTGAACCAAGTGTTAGCCATCACACGAGAATTGTTATC
AGCTTCTAATATTTTCGTGCAATCATCAAACAACTATGGTCATTCACAAA
ACGGGCATTCGACTCCAGGTCCTTCGCACTTCGTCGATAATTCGTCACCT
GTGATTCACCCTCCATTTAATAATACGGGTGGCAGGGTATTACCGAATCA
ATGGAATTTCCACCCTCCACGGTCACAATTTATTCAACAACCTATAAACA
CTACGAACTATAATCAATACCCGCCCTACACACCGCCTCAACGACCACCC
TATCATCAACAAATGTCTAATATGACCAATAATGTCGGATATGCATACGA
ACCTCAATTTACGAATGCCAACCAACAATACGCTAACATCGAAAAGATTG
TGGAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGATGAC
GTTACACGACTCAATATTGATCAACCTATAGTTGTTATAGCAACTCCAGG
TCGTCTCTTAGACCTATGTTCAAGGAACGTGTTGAGTCTTGATGGAGTGA
GATATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATGGAG
GAACAATTGAGACAAATTGTTGCCAAGATGACAATCAACTCCAACCATGA
TGATATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCGTTAGAAA
GAATCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGCGGTATC
AAAAATTCCGTCCCACGTAACATCCAACAAGACGTACGTTTCCTACATAC
GTATCAGAAACGTGAAGTCTTATTAGACGTTTTACGTCAAATTCCGTACC
CGCCCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgacgtcact
gaATTTTTACAAGGTGAACAGTTTCACGCAGCTGCGTTGCATTCTGGGTA
CCCACAAGACTACCGTAATAACGTGATAACGTCTTTCCGTAGCGACGAGA
TTGATATTTTAGTTGCGACTGACTTAGCGAGCCGTGGTCTTGATGTCCCA
ACTATAACACACATTATTAATTATGATACACCTGATACTATAGAGGATTA
TATACATCGTGTCGGGCGGACAGGACGTTTCGGTCGCGCGGGTAACGTGA
CTACTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAAGAACTT
TTGGAATGTTCGAATTGTGACGTCCCTCTTCAGTTGAGGGATGCGAAAAT
GTTTGGGCAAAAAGTACTTCATACGGAGATGGGCGATCGTTTCGCGTGAA
tagtaaaatattcaaaattaaaatctcaaaaaatgtcGCAAAATTTCGTA
CCATTACGTAATCAACCAAGTACAATTCATACGTCATCAAGAGCCAATCA
GAACACAGTATCTGCTGATGCCGTCCGAAGTCGTCACGGAATTGAAATTG
AAGGTGACAATGTACCTGACCCGATATCAAGTTTCGATGAGATGGAGATT
CCACAAGcgttgaaaatctttttaaaacgtGTCAAGAAAATCTCGAAACC
TACACCAATTCAAATGCAATCGACAAGTTGTTTACAAAATCAACGTGACA
TCATATGTCTTAGTGCAACAGGCACAGGGAAAACATACGGCTACTTGCTG
CCATTATGTTCGTTCCTATGGAAACGTCACAACAATATTCATCACCAGGc
acaacaaaatcaacaaaCAAGTCAGCCATTATGTCTCATCATTGTACCAA
CAAGAGAATTAGTGAACCAAGTGTTAGCCATCACACGAGAATTGTTATCA
GCTTCTAATATTTTCGTGCAATCATCAAACAACTATGGTCATTCACAAAA
CGGGCATTCGACTCCAGGTCCTTCGCACTTCGTCGATAATTCGTCACCTG
TGATTCACCCTCCATTTAATAATACGGGTGGCAGGGTATTACCGAATCAA
TGGAATTTCCACCCTCCACGGTCACAATTTATTCAACAACCTATAAACAC
TACGAACTATAATCAATACCCGCCCTACACACCGCCTCAACGACCACCCT
ATCATCAACAAATGTCTAATATGACCAATAATGTCGGATATGCATACGAA
CCTCAATTTACGAATGCCAACCAACAATACGCTAACATCGAAAAGATTGT
GGAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGATGACG
TTACACGACTCAATATTGATCAACCTATAGTTGTTATAGCAACTCCAGGT
CGTCTCTTAGACCTATGTTCAAGGAACGTGTTGAGTCTTGATGGAGTGAG
ATATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATGGAGG
AACAATTGAGACAAATTGTTGCCAAGATGACAATCAACTCCAACCATGAT
GATATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCGTTAGAAAG
AATCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGCGGTATCA
AAAATTCCGTCCCACGTAACATCCAACAAGACGTACGTTTCCTACATACG
TATCAGAAACGTGAAGTCTTATTAGACGTTTTACGTCAAATTCCGTACCC
GCCCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgacgtcactg
aATTTTTACAAGGTGAACAGTTTCACGCAGCTGCGTTGCATTCTGGGTAC
CCACAAGACTACCGTAATAACGTGATAACGTCTTTCCGTAGCGACGAGAT
TGATATTTTAGTTGCGACTGACTTAGCGAGCCGTGGTCTTGATGTCCCAA
CTATAACACACATTATTAATTATGATACACCTGATACTATAGAGGATTAT
ATACATCGTGTCGGGCGGACAGGACGTTTCGGTCGCGCGGGTAACGTGAC
TACTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAAGAACTTT
TGGAATGTTCGAATTGTGACGTCCCTCTTCAGTTGAGGGATGCGAAAATG
TTTGGGCAAAAAGTACTTCATACGGAGATGGGCGATCGTTTCGCGTGAAt
agtaaaatattcaaaattaaaatctcaaaaaatgtcGCAAAATTTCGTAC
CATTACGTAATCAACCAAGTACAATTCATACGTCATCAAGAGCCAATCAG
AACACAGTATCTGCTGATGCCGTCCGAAGTCGTCACGGAATTGAAATTGA
AGGTGACAATGTACCTGACCCGATATCAAGTTTCGATGAGATGGAGATTC
CACAAGcgttgaaaatctttttaaaacgtGTCAAGAAAATCTCGAAACCT
ACACCAATTCAAATGCAATCGACAAGTTGTTTACAAAATCAACGTGACAT
CATATGTCTTAGTGCAACAGGCACAGGGAAAACATACGGCTACTTGCTGC
CATTATGTTCGTTCCTATGGAAACGTCACAACAATATTCATCACCAGGca
caacaaaatcaacaaaCAAGTCAGCCATTATGTCTCATCATTGTACCAAC
AAGAGAATTAGTGAACCAAGTGTTAGCCATCACACGAGAATTGTTATCAG
CTTCTAATATTTTCGTGCAATCATCAAACAACTATGGTCATTCACAAAAC
GGGCATTCGACTCCAGGTCCTTCGCACTTCGTCGATAATTCGTCACCTGT
GATTCACCCTCCATTTAATAATACGGGTGGCAGGGTATTACCGAATCAAT
GGAATTTCCACCCTCCACGGTCACAATTTATTCAACAACCTATAAACACT
ACGAACTATAATCAATACCCGCCCTACACACCGCCTCAACGACCACCCTA
TCATCAACAAATGTCTAATATGACCAATAATGTCGGATATGCATACGAAC
CTCAATTTACGAATGCCAACCAACAATACGCTAACATCGAAAAGATTGTG
GAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGATGACGT
TACACGACTCAATATTGATCAACCTATAGTTGTTATAGCAACTCCAGGTC
GTCTCTTAGACCTATGTTCAAGGAACGTGTTGAGTCTTGATGGAGTGAGA
TATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATGGAGGA
ACAATTGAGACAAATTGTTGCCAAGATGACAATCAACTCCAACCATGATG
ATATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCGTTAGAAAGA
ATCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGCGGTATCAA
AAATTCCGTCCCACGTAACATCCAACAAGACGTACGTTTCCTACATACGT
ATCAGAAACGTGAAGTCTTATTAGACGTTTTACGTCAAATTCCGTACCCG
CCCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgacgtcactga
ATTTTTACAAGGTGAACAGTTTCACGCAGCTGCGTTGCATTCTGGGTACC
CACAAGACTACCGTAATAACGTGATAACGTCTTTCCGTAGCGACGAGATT
GATATTTTAGTTGCGACTGACTTAGCGAGCCGTGGTCTTGATGTCCCAAC
TATAACACACATTATTAATTATGATACACCTGATACTATAGAGGATTATA
TACATCGTGTCGGGCGGACAGGACGTTTCGGTCGCGCGGGTAACGTGACT
ACTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAAGAACTTTT
GGAATGTTCGAATTGTGACGTCCCTCTTCAGTTGAGGGATGCGAAAATGT
TTGGGCAAAAAGTACTTCATACGGAGATGGGCGATCGTTTCGCGTGAAta
gtaaaatattcaaaattaaaatctcaaaaaatgtcGCAAAATTTCGTACC
ATTACGTAATCAACCAAGTACAATTCATACGTCATCAAGAGCCAATCAGA
ACACAGTATCTGCTGATGCCGTCCGAAGTCGTCACGGAATTGAAATTGAA
GGTGACAATGTACCTGACCCGATATCAAGTTTCGATGAGATGGAGATTCC
ACAAGcgttgaaaatctttttaaaacgtGTCAAGAAAATCTCGAAACCTA
CACCAATTCAAATGCAATCGACAAGTTGTTTACAAAATCAACGTGACATC
ATATGTCTTAGTGCAACAGGCACAGGGAAAACATACGGCTACTTGCTGCC
ATTATGTTCGTTCCTATGGAAACGTCACAACAATATTCATCACCAGGcac
aacaaaatcaacaaaCAAGTCAGCCATTATGTCTCATCATTGTACCAACA
AGAGAATTAGTGAACCAAGTGTTAGCCATCACACGAGAATTGTTATCAGC
TTCTAATATTTTCGTGCAATCATCAAACAACTATGGTCATTCACAAAACG
GGCATTCGACTCCAGGTCCTTCGCACTTCGTCGATAATTCGTCACCTGTG
ATTCACCCTCCATTTAATAATACGGGTGGCAGGGTATTACCGAATCAATG
GAATTTCCACCCTCCACGGTCACAATTTATTCAACAACCTATAAACACTA
CGAACTATAATCAATACCCGCCCTACACACCGCCTCAACGACCACCCTAT
CATCAACAAATGTCTAATATGACCAATAATGTCGGATATGCATACGAACC
TCAATTTACGAATGCCAACCAACAATACGCTAACATCGAAAAGATTGTGG
AGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGATGACGTT
ACACGACTCAATATTGATCAACCTATAGTTGTTATAGCAACTCCAGGTCG
TCTCTTAGACCTATGTTCAAGGAACGTGTTGAGTCTTGATGGAGTGAGAT
ATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATGGAGGAA
CAATTGAGACAAATTGTTGCCAAGATGACAATCAACTCCAACCATGATGA
TATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCGTTAGAAAGAA
TCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGCGGTATCAAA
AATTCCGTCCCACGTAACATCCAACAAGACGTACGTTTCCTACATACGTA
TCAGAAACGTGAAGTCTTATTAGACGTTTTACGTCAAATTCCGTACCCGC
CCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgacgtcactgaA
TTTTTACAAGGTGAACAGTTTCACGCAGCTGCGTTGCATTCTGGGTACCC
ACAAGACTACCGTAATAACGTGATAACGTCTTTCCGTAGCGACGAGATTG
ATATTTTAGTTGCGACTGACTTAGCGAGCCGTGGTCTTGATGTCCCAACT
ATAACACACATTATTAATTATGATACACCTGATACTATAGAGGATTATAT
ACATCGTGTCGGGCGGACAGGACGTTTCGGTCGCGCGGGTAACGTGACTA
CTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAAGAACTTTTG
GAATGTTCGAATTGTGACGTCCCTCTTCAGTTGAGGGATGCGAAAATGTT
TGGGCAAAAAGTACTTCATACGGAGATGGGCGATCGTTTCGCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045734XLOC_045734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073645-exon-scaffold_97-1491911889:125959..126113TCONS_00073645-exon-scaffold_97-1491911889:125959..126113Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1510915933:125959..126113TCONS_00073645-exon-scaffold_97-1510915933:125959..126113Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1575043694:125959..126113TCONS_00073645-exon-scaffold_97-1575043694:125959..126113Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1491911889:126599..126721TCONS_00073645-exon-scaffold_97-1491911889:126599..126721Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1510915933:126599..126721TCONS_00073645-exon-scaffold_97-1510915933:126599..126721Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1575043694:126599..126721TCONS_00073645-exon-scaffold_97-1575043694:126599..126721Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1491911889:127563..128362TCONS_00073645-exon-scaffold_97-1491911889:127563..128362Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1510915933:127563..128362TCONS_00073645-exon-scaffold_97-1510915933:127563..128362Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1575043694:127563..128362TCONS_00073645-exon-scaffold_97-1575043694:127563..128362Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1491911889:129163..129859TCONS_00073645-exon-scaffold_97-1491911889:129163..129859Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1510915933:129163..129859TCONS_00073645-exon-scaffold_97-1510915933:129163..129859Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1575043694:129163..129859TCONS_00073645-exon-scaffold_97-1575043694:129163..129859Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1491911889:137052..137123TCONS_00073645-exon-scaffold_97-1491911889:137052..137123Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1510915933:137052..137123TCONS_00073645-exon-scaffold_97-1510915933:137052..137123Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1575043694:137052..137123TCONS_00073645-exon-scaffold_97-1575043694:137052..137123Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1491911889:144042..144668TCONS_00073645-exon-scaffold_97-1491911889:144042..144668Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1510915933:144042..144668TCONS_00073645-exon-scaffold_97-1510915933:144042..144668Clytia hemisphaericaexon
TCONS_00073645-exon-scaffold_97-1575043694:144042..144668TCONS_00073645-exon-scaffold_97-1575043694:144042..144668Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073645-proteinTCONS_00073645-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:125959..144668 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.622	27.5246	32.7881	33.7427	70.8755	56.5695	28.4065	31.5068	7.42704	9.07124	5.51397	5.51815	5.94268	4.44631	2.8598	3.42788	8.62867	10.2817	4.31753	4.45021	9.22791	7.92987	15.2281	12.6167	9.1139	8.2507	2.67322	1.87224	5.86042	6.70572
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00073645 vs. Swiss-Prot (Human)
Match: DDX41 (Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 2.019e-54
Identity = 101/251 (40.24%), Postives = 153/251 (60.96%), Query Frame = 2 
Query:  932 VVIATPGRLLDLCSRNVLSLDGVRYFVIDECDRILDMGMEEQLRQIVAKMTINSNHDDIRTSLWSATLPESLERIARSAVIHPIYVCCGIKNSVPRNIQQDVRFLHTYQKREVLLDVLRQIPYPPVLVFTSSKDKVDDVTEFLQGEQFHAAALHSGYPQDYRNNVITSFRSDEIDILVATDLASRGLDVPTITHIINYDTPDTIEDYIHRVGRTGRFGRAGNVTTFLTLDC--KIANELKELLECSNCDVP 1678
            +++ATPGRL+DL  + ++SLD  RY  +DE DR++DMG E  +R I +           +T L+SAT+P+ ++  A+SA++ P+ +  G   +   ++ Q+V ++    K   LL+ L++ P PPVL+F   K  VD + E+L  +   A A+H G  Q+ R   I +FR  + D+LVATD+AS+GLD P I H+INYD P+ IE+Y+HR+GRTGR G  G  TTF+   C   +  +LK LL  +   VP
Sbjct:  316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQR-----QTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTP-PPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
The following BLAST results are available for this feature:
BLAST of TCONS_00073645 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDX412.019e-5440.24Probable ATP-dependent RNA helicase DDX41 OS=Homo ... [more]
back to top