XLOC_001618 (gene) - C. hemisphaerica

Overview
NameXLOC_001618
Unique NameXLOC_001618
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000024:147143..158939+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001618 ID=XLOC_001618|Name=XLOC_001618|organism=Clytia hemisphaerica|type=gene|length=11797bp|location=Sequence derived from alignment at sc0000024:147143..158939+ (Clytia hemisphaerica)
CTTTTAGTATAATAAATACAGAAACAATGCGAAGTATACAGAACGCAATT CTCATCGGCGTCTTATCGCTTTTCTTATACGTTTATTGGTAAGCTacgta atacacctttttttataagaacatccaaaatttttgaagcctttagatgt tctttactttttgagtttcaagcctaaaaatattcttattttccccattt tttatgtatttttgtccatttttctatgaaattagctgttttagagtccc cgaagccttaaaatgttcttaacttgttcttaacattttagccattgaag ccttatgttcttatatagtttgttcttataaaaaaacctgtaTGTTGCAT TTACTTCTAACTGTTCTGGTGGGAGCATCGTCCAATGAAAAGCGAGTTTG TTTATGGAGAGTGTTCCGGTAacgacaaataaacaaaaaaagaacagcGA TAAAAACGACATCTTTATCCCCGACCATATATCATAGCCCAAAGACCTTA AATTCACTTTTGTCCCTTAACACTGGCCGCCCAACAAGTCGAAGCTACTT TGGTACCTACCCAGTGTGCTGATTTTTTTCGCTGTAAAGTGGTAATCGGA AAGTTTTTCCGGAAATGAGAAAGTTTAGCGGTATGAAGTTGAACTTTATA TCTCCCATTACTAGTATGTACCCAGTCTGTTcttctaaagaatcctgcat tgcaacacgcatgcgtaatttgttgttcttctaaaccacatgcagttaat tcccgtgatgaACAAAGAGACTTTCAGTCGGccggcgaaatatgtcgttc tttttgtctatctTAAGTAATTCAGGATTCTTTAGAAcatttagataaac cccctcacTTGACACTTAGAAAATAACACTGTTTTTCTtccattcttttt atttttagcaaaGTGAATACAGAGCCTAAAGTTGCAAAAGCaggtaagaa aattttacttcagTCCTCAGTTTAGTAGTTCTCTATCAAACTGAGGTCAA TGCGCACATACATACGTGTTGGCACTTACAGGTAAGAAAAGTGGAACATT TATCGTCACAAACAAATAGGGTATACCGGTTATCTTCAGTTcacatatat cgacgctgtgccgacgaatagagattctattcatcgtNtaaactgcatac tgatacagtctgctagacattaataaggtaatatttgctcttcatctttg attctttctacagtgattagattgacacaccCGCGATAagatttctatta ttggtcttcagaggttaatatattctttgaaaacttaacctctgatactc agcaGGGTAATGAAATCGCCTTAGAGGAAGGTAAATTTGAAAGTTGAGAC AATGATTGCTCCAGGGCTTTTAAgtgtaaaatatcgactctgtTTATTCA ACATAAtgatacccctgtctcacagccccaatGGGACTTTTTTCCATAAC GGGATAAgaattttgatcaaattcaaATGGAGATATAAATTCTATTATTC CGAGCGAAAGATCCAGTGGGAATGGTATAGGAGTACAATTTATgtacatt gaatttcaaatgagcAGAAATTAGAGGGTATATTTCCAACCGAGGGCAAA ACTTTACAGACTTTAGCCAACTTTTCCAGTGGGGCGTGGTCCAACCGGTT CTGTGATACTGTACAGGGGTGTATACTATAAAACGATGGTCAATTGAGAG ACACCGTGCGCTTTCAACCTGCAAAATCTTATTCTAACTTCTATTCGAAT CTCTCTTGACTCGAACTTCCCATCGAtgtgaaacactcttaaaatacTTA CTGCAATTctaatctctctgtaattcgaacaaattagattcTCTCATTCG AATTCGAATTAGCGCAGAGTAAACTGTAATGTTTTCCCCATATTATTCTT TTACAAAACTCTTCAATGATTGCCATTCCATTATTAAAACttgttggacg gtgaaaaagaatgcggctattatattttgatttttcccattATTAAAACT TGAATATTTGGATTTACGCGGTTTCTTGCCTGTGACCCATCCAAATATTC AAGTTGTAAaaattgtaatatattttagGATATTCGAACGCCAAACGTGA CGATAAAGAAGACCcagaaataaacaaagattatTATAAAGCACGTGAAT TCAACAAATACGCGGTTGCCGCAGACAATGTTATCTGTTCACGAATGGGG AAAGATATCNtctctgtaattcgaacaaattagattcTCTCATTCGAATT CGAATTAGCGCAGAGTAAACTGTAATTTTTTCCCCATATTATTCTTTTAC AAAACTCTTCAATGATTGCCATTCCATTATTAGAACTTattggacggtga aaaagaatgcggctattatattttgatttttcccaatATTAAAACTTGAA TATTGGATTTACGCGGTTTCTTGCCTGTGACCCATCCAAATATTCAAGTT GTAAaaattgtaatatattttagGATATTCGAACGCCAAACGTGACGATA AAGAAGACCcagaaataaacaaagattatTATAAAGCACGTGAATTCAAC AAATACGCGGTTGCCGCAGACAATGTTATCTGTTCACGAATGGGGAAAGA TATCTTGAGACAAGGTGGCAACGCAGCCGACGCGATCGTCACGACCCATT GTTGCACGGAAATCATAAATAGTCATTCCACTGGATTGGGCGGTGGTGGC TTTTTATTGTATTACGATAAAGATACAAGTAAGTCTCGCAGCtaacacac aacgttgtttcaccGTTTacctaacgttcacaacgtctatataacgttag ttggacattgaaacaacgttgtgtgtcagcagGGTTGTTTGAATTGGCCT TTTTGAATTAGCCAGCCATGTCCGCGTTCTAGAAATAATGATAAGATAAT GTAGTTTGCAGTGAATATAATAAATTCATCGCATTATAAACCAAAGACTA GAGGAGAATCTTCAGCTTTTTCTAGCGCAAGACAAATTGATGCCACAAAA AATTACCCTGCATGTCGGGACGGATTAAATCTAGCACTGTGTTGGTCTTC GCATCTTACATATTTCCGATTCTGGCGGTAAATGTTACTTCAAGTGTTTG TATATTAAAACCGTGCAAGCCGTGCAACTTATGTAGGATGTAAGTAATAT GTGGCTCAATATCTATATAGGAGATTCATCTCTAGCCTCCAGTTATGTAT ACCTTATTAGTTACAATGTggcttttcgaccgtagccgccaattgccaca TTTTgggtccgttttaccaccctaaaactgtCTCAgccttttttgcacct atagacaataaaAAAAGCGTATAAAAAAGGATTAAATCGAGTTTAGCGGG GTAATCAAATAATAAAGTGACACGCGCCGGACCACGCgcctacggtcgaa aagatgtataAGGCATGAATTGCgctaatttttttgacaaaaatttgtgT CGCTTCCTTACCGTGAAATACACGTATAGGTACCCAAACTCAAACCCAGT CCCTCagttcacttttttatgaatCCGACAGCGCTCACGAAAGGttgtat cacgtccatcagtgAAATTAAAAAGTGATACAAGTGTCTCTGGGTATGAG ATTGCCAGTGACCCTTATTTTCACCAGTATGTATtctatttattcttttt ttttcagacaaaGCTACATCATACAATTTCAGAGAAGCTTTGCCGGAAAA ATATGTTGAAGGCATAAGTAAGTACCAGCCAAAAATATTACAGAAATGCT ACACTTTTTTTCACAGAACgacaaacatttttgaagcctttggatattgc taactttttgagttaaaaatgtttaaaaatgttactataatgttttcatt tcaccattttgtgggtTTTATTGTGTATTTTCCTAAGAtatttggtgttt tagagtctacaaAACTTTAAGATGTCCTCAACTCGATATTTTGGTCATTG ATGTACCAACTTTCGAGATGCCTGACAAATAATGCAGGATAATAATAAAA ATCTCTACCTCCACCCATTGCTGGGTATGGTTCAACATTAGGCCTATGTT TTGAAggttttctatttttgaaacaaagaaCTTACAATCTAGTCAATTTG GATTATTTATTACATTCTTTCTATGTAGACAAAACAGCTGGTGAGACAGT CTTGGTTCCCGGTGTTTTACGTGGTTTGGAAGCGGTACACCAAGATTACG GAAAACTGGAATGGAAAGAATTATGGAAACCATGCATCAATCTAGCTGAG AAAGGGTTCCGTATCCACCATGCTTTGGAAATGGCTATTGCACATAAAGC TATGTTTATACATCGGAACTTAGGCTTAAAGTAAGAACCTAGACCTgaaa actagtctgttaattaatcaagTCAGAGGACGGGAGCCAAAGGGTGCTGG GCGTTTTTTGAAATAGGACCTTCATTGGAGAACTAGAAAGAGGGTGCTGA TTAACATCGCTTACCAACCCTCCCGCcgacaatttttgtttttacgcTTG CTTAACTCCTTCGCTCACTTTTCTCGTGTGATATCGCTGCAACCTAACTG GCGTGTCAGTCTAGAATTCGAAATTAATTTAAATCGTTCCTTTTTACTAA GAAAGCACTGTTTCTTTTAgcttgagagaaaaaattaaggTTTTTTGATG ATAAAGCCCTATTTTTACTTTGTCAAAAATCAGTTAGTCTAGCTCATATT CTttataaattgttcttattttttggcgtttTTTGAGCCCGATTCACGGT TGACCCCTCGAATTTCCCCTATCATGCATCAGGACTAAATCTTTAACAAG CCCATTAAGAGATTTAGAATCACACTATCATGCAGGAAAAAAAGCTACAT TCAAGAAATAATGCAAGCTGCTTGGGCCCTGGGATTCGCTAAAGATTTTC AACCTGATAAAAAcaaatagcgagattatgtatctgtgTTTTCAATGACA GAGACGGTTAGCTTCTATTGACTACATCCTAACTGAATGAAGCCAACGGT AAATTAGTACTTTTCACCGTCCCTGATTTTGCAGGTCAGTACTGCAGGTT ATTTACTTTAGTTTTAGTCAATCCACCGTCctaaaaagtgcaaatacata aactcgctgatAAATCCTCAATCCTGAAATTACAgatccaaatttttgtt tcgtATTTTAGAGAACTTTATGCTCCAGACGGTTTCAAACTGAAGAAAGG AGATTTATTGAAAAGAACAAAACTGGCAAAAACTTATCGTCTCATCGCTG ATAAAGGAGCTAAAGAATTTTACGAGTAAGATTTTTATAACAGCAATTAA GTCAGTGCAAAAGGGTGAAATTTTGACTGTGAATTGGTCAATTAGAGACG AATTAACAGAATGTGGTCATATATAAGTGACTGGTCctacaaaacaaaca aatacaAGGTGTCCCAAAAAATTGAACAAttaaaggaaaatcaaaattcc cTATTAAATAATAGATATTCAAGCCCCAAGTTGATTGAATaagtttttga gattgaaaAGGAGATATAAAGTTTTAGGAGCAAAAACAACAGACTAAAAC TCGATGGAGTTTAATTTTCCTGTTGCGACAactttttgtccaatttttcc agtgggttgtGGTTCCTGCCAGGTCTGTGAAAAGAGGGTGTATTCAGCAT TTCACAACTCTTGCTttcaaaaaaatagcaaaagtcTTCTTTTTGAGTCA ACATGTTTTGGAAGGCTGATTTGAATCCcttataacacccctgtgtcact gaAAGATTTGGCCAAATTTTTGTTCCCGGTGGACAAAATACCTTacaatt ttagccccactgggaaattgactttgacttcatccccatttgaaattcaa tgcaaaaactAGCTGTCCAataccatccccactggatgtTTTAAGCTCAG GAACGATAGAATTTCTATACCCATTGGGACGggcattgggatttcgatag acattgttatccccactgtgggaaaaagttccaccggggctgtgggACAG GGGTGTCTTTATAACAAAAACTACTCAGAAAGGCATACATATTTTGAATG GTTGTTCATATGGATGGCTCGGCTAGGTGAGGTGGGATAGATTTTCGAGT GTCACGTGATCTATTTTTAGCCACTTGATCCGTCAAAAACTATGCCGTAA TCCCTTACCTAACTTAGCCGGGCCAGCTCGCCTCCATATAAACAGCCCCT AACAGTCTAGATCAGATTATGACCTTACCTTCATCAATGTATTTTCTAGA GGTGAGATGGCTAAACAAATCGTGGCTGATCTTAAACAACATGGCGGCAA AATGTCTTTAGAAGATTTGAAGAAATACCAAGTGATTAAAGAAGAAACTC CAATTCATATCAAACTAAAAGGAATGGACATGTACTCCACTTCTGCTCCC AGCTCTGGTGCTTGGCTTGCATTGTGTTTGAAGGTTAGTGCGTTACGTGT GCGTTTTATTAGagtagagtctacttctggctgaactttgctttttgata atttttgatgacgctgagtccagtgaagtagactaggagcgtttggcgag gtcgccattttgaaaaatgatgtttaaaatccaaataacataaaaaacta cttggagttgaaagatgtaatcaaaaatgagaaacaaacattaataacag atttgcaatcccttattctcaaataaaaacattacttcgtactgttttta ccttccaaaaacaactaaaatctaaACAAAAGCATAtttattaccatata ctaccgggccacttaatcgcgccatccagtctatcaaaaagctttaagtg gaccccgggctagtgttttataagaatgtcaaaatttttatttgagttCT AAgcctgaatgttcttaacttgttcttaatattttggtcatcgaagcctt acgttcttaaaaaaacacgTGCTTGCGCGTTTAAGgtaatacagtggagt ctctttagcTCGAAACTCTTAACTCAAATatcttcttaactcgaaaaaat tcTCAGGTCCCTTCAGTTGACAATCCGTTataaccttactccataactgg aaatttccataactcgaacaaatttgtgttccccgggAGTGTTCAAGTTA TGTAGACTCCGCTGTGGTATCACCAACCCGCAGGGGGAATCACCTCATTC TACATTCATAAACTTGAACTTACGGATCTTTcacaaaatagatttaccta attttacttgaaaatccttttttccAAAAGGTCCTGATATTTTGACTAAA TATTTTGACTAAATATTGGTTAGGCTAGGTTAGGTTTTTTTCCACAGtga tgataaaaatttatatctAAATCCCAATAGGGATAGAGATTGTATtcttc caaggttaaaaaacttAGTTGTGATGTTTTGCaatgcaattttttaaaca ttaaaaatctAGGGTATTTTCCGAATCGATAACGAAATTTGGACGGGTCT TTGACCAGTAGTGTAGTGGCAGGGGAATGAAGGGCGCCGAAAGACAAGGG GGGGGGAGGACGCTGTCGATTACTTATTTCAGCGctcctttgttttttta aacCTTATAATTAGCAGTTTTCAGCNGAGGACGCTGTTGATTACTTATTT CAGCGctcctttgtttttttaaaccttataattagcagttttcagccaaa attagaaaaaataccGCAACATTTTCgtcctcgcttcgctcgcgtaaGTT TGCCGAAATTTTGATCCATTCACTACGCTActgtctgtgacacagggatg cTTTTGAGTTTCATGTAACACGGAAGGTGATCAAATAGATTCACTACTCT TTGCCTTTAGGTTCCTGGTTTAGCTTCCTAGATTAGTTCCGTTTAGGGAG CAGGAAGGGTGACCAATAGATTTACTTCAATGTCCTAATGATCAACAAAA CTTCCCAGAAGTACAAGTCCACCAGTAAGGAGTCCTTCAAGGTTAACTTT GAAATCTCAATTTTTGGTAGGGAACCTTAGTTGAACACGATACATTTTCT ACCCATAGGTGATCGAGAATCTGGACATGACAGCCAAGAAGTATAAGAAG AATCCAACTCGTATTTATCATCAATTCGTTGAAGCTTTCAAATATTCGTA TGCTGCTGCTTCGTATCTCTCAGACaccaaattcaataaaaatgcCAACA AGGtaaaagataggtagcttttgaACTCGTAATATCGGGTTTACTTGTCT TTGGAAAATTGTCTCTCCAGTTTACTtttattttggccaaaaaaggaAAT AGAAATCTATAAGTCATCAAACGGGCTCAAGAAGGGCCTTCGACTTCGCA CCTGGACCCAGTGATAAAATAATTGACAGTCGATCTTGCTAATTGCACTT GTAAAGCACCCTAAACATTGAACAAAATCAGAGATTTCCATTTTGGAAAG TTTATCTTCTAACATCTCTCGACAATTTTCTAAAGAATATGCTCCAGATG CTCCGCAATATTTGGTAGTAAGAGATGTAGTGTTTTCAAAGAATTTCGGG CTGCACTTTTcacttatttcgcccagtgaaaaaattgaaaacaaattctT TAATTCACTAATGTTTCAAACCATTATAACTTCAATTTTAAGATCGAGCA ATGGATGTTGAAACCTGAAACTGCCAAAGAAATTGCGCAACGTATAGACG ATCATTCATACCAAGTTGAACACTACCAACCTTATAGTAAAGCCTTCTTA GAAGACAAGAAAGGAACAACACATATGGGAGCTCTTGACGCACATGGTAG TGCTGTCTCATTGACATCATCAATCAACGCTTAGTAAGTGGAGCCATATA GCCACCCCCTTCTAAAAGACCCGATGGCGGGATTTTTTGAAACAgctggg gtaaaaataacggaccaaaactcgatggggattgatattgatgtttttca tggctggggatttgaatttcattgttttcgagttagaaaatcTAGTGAgg atgaaaaaaaacacaatattttgaaatctttgaacGGAATCTTGCTTAAA AGTGATACCCAAATGGTAGTGCTGCCCAATGTCGGAGAAAATATTTTAGG TTATCTATTACTTCAGGGAATATAAAAGGTCAGTGTAGGTAACCCTACTT TCATCGTAGTCCTTATAAAGAACCTTAGTCTGGAAGCTTTTTGTGTTAGC TTTTTGTtggctttttcctttgttaatatcagACGATGAAAAGTCgtttt gctcagtttttgatctcgttaccaagtactcctctagggattggtttaag attcaATCACATGAtaaaaaagtgagcaaaacaaactcataatttctcaa cgcaaaacaagtaagaaacaatggaaagaaacaaaaggcttccagaccgg ggttttttatacgagCTATGATTACATTAAAGGTAATGAACGTTATGAAA TAGGCGTCAATAAAATGATTCTATTTTTTAGTTTCGGTTCAAAGATCAGA TCACGTGTCCTGGGATTCATGTACAATAACGAGCTAGCTGATTTCTCAGA ATTCTGGCCACAATTGTACAATTTAACAAGAGATGAAAAAATCCCTGGTA AAAGACCCATCTCTCGATCTATGCCAACTATTTTCGTCAAGAACAAGGAG GTGCAAGGAGTCTTCGGTGCAGCTGGAGGAGCCTTTATCCCAACCGCTAT GTCGACTGTAAGTCTCCGTTTCTGCAAGGGTGTCGCGAAAACAATATGAA TATCAAAATGAAAGATACAAAAGTAGTGATTTTGTGTTTCGCTAATTTTC TTTACGCAACGCGAGGAAGCTGTGAGTCTCTGTCATTGAGTTTAAATCCT CGAAGGGGCTAGAATCGAAACTCTTGAATGGGAAATGAAGCGGATTTCCC GATATCTAGGCTCTGTGAGCCACGTGGTTTCACATGCCTAACATAACTGG TGGGCGGGTTTGGGGCGTCTGtagaatccctttcgctttgcgaacacgag actcgttctccgtgcgtaaccccttttacataACCCCTTTCACATTTTCT ACGATCAGAGTCTTTAATTATACCAGGTTAGTGGTAGCTTTCATGCTACG GTGTACTATAGCAGAAAAAGTAAATAGAATAGATATTGGTCACGTGTGAA AAGGTACTGgactgttcctgactgttaAGTATTCACTATATTCTTCAATT TTCCAGGTTTTATCCAACTGGCTTTTCTTCAACGATAACTTGAAAGTTGC CATCACTCGTCCTCGCATCCACTCACAACTTTTCCCGCCAACTGTTTTGT ATGAGAAAACATTACCCCCTGAAATTGTGACCAGTTTGACGAAGAATTTC GGACACGTGTCAATCACGAATGATACTTATGATGTCTCAGGTAAGAGGTT TCTTCTAGTGCAGTTGAACCAACCCTCTACTAccccattattcgataata ccgagtttatgtatttccACTTTTGAAGACGGTAAAGtcactgaagcgat ttggaataacccacagttctgacccgcattatcgaggacggtaaaagtgc tgatttaccgtcgtcctcagctagTCAGGATCTtgccaaattagaacctt acttACTTATGAACTCGGTGATATTGAAAAGCAGTGTCAACAAGGAATTT TCCTAAGCGACGCTATACTATTCAAAACGCTTCCTTATTCGAGGAAAATC CGATCGAATTAGGGAGCGTATACTGTATGTAACGATGTAACGAGTTTCTG TATCTACCTTTTTGAAGACGGCGAAgcgactgaagcgatttgaaaaGTCT AAACTTTTGACCCAAAAAATCGAGGGCTGTAAAACCATAGATTTTTCGTC GTCTCCAATCAGTCAGGATCTAGAGGAACAGAACGAACCGTCTCCATTGC AGAAACAGCGCCatatataaactcgctactttCGCTATCGTGAGAAGAAA ACGAAAGCCCTTTTAGGAGGGTTAATGCTTGGATAAGACAAAAATGATAA TCATACATTTTAGTCTTAATTACTCCCTCCTCTCTTCTTTCAGGTCAACC AGATGCAATCCTCGGTGTTGTACAAGCTATCGTTCGAACACCAGCCGGAA AACTAGCTGCTGAATGCGATTATAGAAAGGGCGGTGCGCCCGATGGCGCT TAAGATGGAATCATTCATTCTTTATAGGAATCTCAATAAATAGTAGGATC TCTTTAACTCGATTAACATAGctcgaatatctccttaactaGAACAAGTT TTCTTCTTCCTTCTGTTAAAAATCCCTTATTAACCTTACTCTATGACTCG aagtttccttaactcgaataaatttatgtttcctatgcgtgttcgagtta tggagactcaactgtattaatacccagctggcacacaacgttgtttcgac gttcatgtaacgttatatggacgttgtgaacattagatggacgttgaaac aacgttgtgtgccagcttggtAACAAAGATTGAAACTATCAAAAAATGTA ACACTCCCTTCTCGGctaccctttgagagacttttatGGCCACTATGTGT GAATGATATAGAGGTTGACTTTTTCAATTGAGAGGGGTCTCTTCAGGTCT GTGGTACAGGGGTGTAATAAGTCTCACGGCAATGCGGTATAATATCTCAC TTTTTTCATAGAAACTTCtacaatacacgggtttcgaattaaatctggcg cgagagaaaaaatcaagtaaataaaaggagcgataaggggaaatgactta taaaaggttgatagatttcctttcttctcttttgaaagccaggtgttcat tcaaaagatgtttttctattttaaattcaataaaagaaatatgatta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002946TCONS_00002946Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002946-proteinTCONS_00002946-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:147143..158939 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.03 0.09 0.08 6.45 7.58 47.9 53.68 20.98 13.91 45.98 41.94 43.23 35.12 30.7 80.42 48.71 48.1 0.25 0.35 24.33 23.95 18.2 18.18 25.65 30.7 3.9 0.97 0.15 0.24