XLOC_001719 (gene) - C. hemisphaerica

Overview
NameXLOC_001719
Unique NameXLOC_001719
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:269349..273130+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001719 ID=XLOC_001719|Name=XLOC_001719|organism=Clytia hemisphaerica|type=gene|length=3782bp|location=Sequence derived from alignment at sc0000025:269349..273130+ (Clytia hemisphaerica)
CGCGAATCTTGAATATGTCAGTTGGTTGGtccattttttaatattttttg
ggACATTATTcttgaccaaattttgactttatAAATAATAACGAGGAAAA
ATGCATATAATTTTGTTCCCAGCATGATGTAATCCAATTTAGTAGTCTAG
TTGTTTCGAAGTAAAATTCTACGACAGTCTTTACTACAATATTTCCATAA
TGTCCAAAGTTAGATCAAcgttagtctagcaagctagacgactaattcag
gcatagtagaaataaagcaaaaagtaatggagggaacaaagtaatcccgt
aacaataatcgtattatcatatgtATAACGCCtatatactactgtattac
acgcattatgaaCGACTGCCGTCTAGATCAACGGTCCAACGAGTATGGAA
AGTCGAGTTTTTGCTCGTATGTTTTCATAGAATTTTTGCAACAAGGAAAA
AGGCTTTAAAGTTAAATCGTGTCTCCAAGTCtatacttttctttttaact
GGACACAATGTCAATATTGTATCAAAGAGTAAATCTTAGTCTATTATGGT
CCAGGCTTTTTATCAGGCCAGCAAGatctggagaaaaaaaatccccaGGG
GCACTCATATActccgacccacggcatgtgtctttaagggtaggtttttt
aagcccctcgaaatgcactgtaagggtgtacttttgatagcgTGCAATAA
AAGGGTATTCTTTTAGCTGAATACACTGAAAGGGTGTGTTTAGGGACTGT
TGAATTGCAAGTCTGATAGTAAAAATCTAATGTATCTTTAGTAGTTTTGA
CTCGCACCTATTTTGATTTGCTTTGCACATTCTATCtacatctcaggctc
attttcaggtggTTTCAGTTAAGCAAAGATATagactacactgtaagggt
cagaaacgttcggGAAAATGCGCTGTAAGGGTGCCTTCTCACTTCTCCAG
GGctgtactgtaagggtacgattttgaaagctattttttgGCGGtacatg
ccgtcgtttagagTGCCCCCCCTGGGTGAAATTTAATGGTAATGATTATT
TCTTTATTTGTTATTACgcataaataggatttctttgACAAATCTCCAAA
AAAATGGCCAAACGTTATAAAGAAATGGATCCATCAAAGCAACAAAAATG
CGGACCTATCGTCACAACCAATTTCACAGTGTTTTGGATATGTTTATGTT
TCATAATGGAGCTGGTTGCCTTGGGAACGAATAAATGGTACGTGAGACAA
GATAAAGAAATCAAGTTTTGGCATGGTGGACTTTGGAATCAATGTCTTGG
TGAAATTGATCGCACTTTCTGTTCTTACATCAGAGATACTCCAGGTatat
tcttttttaaaagaaaagtcaatttttgatgacgctcggctgttcttatt
gtTTTTGGCACTgtgagcctaaaattgttctcgCCCTGTTCTTATTTCTA
GGGCAAAACTGAGGTTCCCTACATATTTCACTAATTTGACCCTTAATTTG
CTTAAAATTCATGCATTCCAACATTGTTCGTAGTTTTTTTTTCCAGTCTT
TTTTAGcctaatttttcttataaaattgttcttatatatataTTATTCCA
ATAGTATATTGGATgactaaaatctcaaaattgttcggttttttaattaa
tttcagCGTGGTTGAAAGCCACTCAATCCATGTTACTGATCGCTCTCTTC
TCCATGTTTATTAACATCATTTACATCATGGTTGGTATCGCAAGAAAATC
GTTGAGAGTCAGTGTCATGCTTGGAATGACCAATTTCACGAGTAAGTCCT
CCTAGTATTTAAAGAATCTCCTGTTCAATGTGGAAGAAAATTGACTCCTC
ATCCAGTGGTAGATCTGAGGGAATtctaaattaatatttttttagtcATA
CTCCTAATAAGGAAACAAAGGCTCTGCCCTTCGTAAATTTTGAACCCCCT
CAAACTCGCCACTGCCGCATCTCTCATAGACTTACTGCAGGGAGATCTTT
CAGATCATTGAACTCATCGAAGATGAAAATagacatttcaaaatttgacc
tAAATTTAGGAGGAGAGTTTAACTTTCAGAACTCAATTTGAATACCGTTT
CTTTAGGTTTCTTTACCTTTTCTGTTCCATATGGATGATAATGTGCCCCA
CATTTCTCTCTCAGACTTGCTACAGGAAGATCTTTCAGATAATTTAGGTG
ATCGAAGATGAAGATATAAGTTTCAAATCTTGATATTAATTTAGGAGGAA
AGGTTTACTCTTACTTTTGAAGTCGGCTAAAAATTGGTATTTGAATTGGT
TGCATAAGATCTTACATGACGAAGGCTAAGATCTAACTTACAAGCCTAAG
ATCTAACTTACAAGCCTAAggaacaatacaccttttcgaccgtagccacc
aattgccgcacattttaccaccctaaaaccgtcccagttttttttttcgc
acctaaagacaatagaaaaagtgtaaaaaaaggattggatcaagtttagg
gtggtaaattaaataataaagtggcacacACGTTTGACCACGCAACTACG
ATCGAAAATGTGTATTCAAAAGTCATTGTGCAACTTATTACTTTCCACTG
CGTTTCTAATGTTAATTGATgaccttttctttttccttttagcTTTCTTC
TTTCTACTGGGAGTGATCATCTACACAgccaaaggattttcagacaTCAT
TAGCCCAAGTACCACATATTACGTAGCCTGGATCACAGTAGTGTTCCATG
TCATAGCGGCTATCTTATGTGTCATCTCCTTTATGAGAGTATCCAAACTA
TCGAAAAAGAAATCGGTAGATTCGGGGATCAGAATCTAAAAATGGTATTC
GAATGGTGTAACATCAACTGCTTTGCGAAAGATACCTCAATGATGTGAGG
ATATTTGGTATATATCATGGTATCTAGAAAAGAAAACAGCAAATGTAGCA
GGATGCTATTGTTTTTAGATCCCTGGATTACTCTGTGATATGTTATTTAT
GCTTCACTTGCAGTTATATGAAGTAGCAGTAAGTGGAAAAGTCGGTGAga
ataatttgaaagaattgGAAATGACGCAACATCAgcgaaaatttcaaaga
aatgatTCTGCAAGTCGATATCAATATGTGACAAAAATTAAATGTGCATA
TACAACTGACACACGCAAATGGTTGTTTTTATGTTGATGTAGTAGGTGAA
GTTCTTACACCAAAAAGAACCCTATAATGCCATGTGCTGGTTTCATGATA
TGtaccattacaatgtcttccacgaacccaacagctggttggttgtaagt
gacgtattgactgattgtaCGTCAactgcaaccaatcagctgttgggtcc
gcgATGTAATGCCAGAAGTCAtcgcaatggtgcatatcatgaattaaaga
CAAATCTAGATGATACAAAGCAACATACATTGAAAAAGGAGTTGATTAAA
TTTGAGGGTTCCTGACGCTATTCAATTTCAAGGAACGCTAAAAAAAAGCT
TACATGATATTCGCAAAACCTGAAAATGTTGCTGTTCTTACTCAACTTTC
TAACTTATATTAAATCTTTGAATCCTGAATCAGGAATCCCTTTAATACTT
TTATAAAGATATTTTGTCAAACTATTTATATCTTGAGATTAGGACGTGGT
AGACAGAAATAACTGAACGAATTTATAAAAAATGCTGACTTGACACTGAA
TTTTTTACACATACATGATGAGGTTTCATGTATGAATAATTTCAGCTTCG
TTAAATCTTCGTTAAGTCTAATTGCTTCCTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003097TCONS_00003097Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003097-proteinTCONS_00003097-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:269349..273130 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.4	4.38	1.18	0.64	26.76	20.29	26.64	25.75	21.33	22.07	18.06	15.93	9.72	7.53	1.04	2.15	1.57	2.52	11.75	13.15	3.89	4.49	7.38	6.31	3.93	5.24	38.61	32.99	8.14	6.79