XLOC_001760 (gene) - C. hemisphaerica

Overview


Name	XLOC_001760
Unique Name	XLOC_001760
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000025:537568..547590-

gene from alignment at sc0000025:537568..547590-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_001760 ID=XLOC_001760|Name=XLOC_001760|organism=Clytia hemisphaerica|type=gene|length=10023bp|location=Sequence derived from alignment at sc0000025:537568..547590- (Clytia hemisphaerica)
AGTGAAGATTGAGATACAGAGACTGGGACGGAAAGATGCGGCCATCTTTT
TTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTGTATG
CTCTGAGTCAAAGAAAGGACGAAAGNTTTTAAAGGGTTTGGCATGTGCTC
TTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGGACGA
AAGGGTAAATGTAGAGCATGTGAAAAAATGGAGAAGGAAAAAGAGAAAGC
CGAGAAAAATATCAATGTATTAATGGAATCGTGCAAGCCCGTGCCCAAAC
AAATACAACAACTGTTTTCCACAAACATAAAGCGCAAATGGAGTAGCCGA
CAGATTAAAAATGGTTTGTTAAACTTTCTTTTTTATAATACACGTTTTTT
TTAATAAGAATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTATTTTAATGTACAGTTT
TGAAAATATTTAGATACCAATGATCGAATTGTAACATTAGTAACTTTGCA
GTGAATCACTATTCAAAATTTGAGAACCAAAAGGACTATTTTATAAAAAG
TTATTCGTGAAAAACTGAAAACCGGTTTCTACAAAACATTCACTGCTAGG
GAAGAAAACCATAGACAGCGTACTTTCAACACAAAAAGTTTAAGCCTCAA
ATTCCACCTAAATTTTCAGATAGAGGGTACCTCTATTCTTTGTAGGTTTT
AAGGGGTATCCACCGGTAACAACAAATCTAGGATCAAAATACTAAATTAT
AAAAAATGAGTGTTATTGTGTATTGTTAACCGGTTACTTTTTCAAAGCGG
GCTACACGGCTTTTTGCGCAATGCTATTGGTTCTTTTTGCATGACGACGG
GCCTACACTGTCCAAAGTTGCCCGTCGTTAGGAAAATTCATTGTGACGTC
ACTTTTTTAAAGGAAAATGAACAATGCATTGACATCATTTCTCTCATTTT
TTATTTCTGATATCAGAAATAATAACAATTTTTGATCTCTTTTCGCTTGT
TTTTTTCGCTTTATTTCGCTATTTTTCCTGGACAAAGCGCTGAAAATCAA
TCCAATGAAGGAAACGGTTAACAAATACAATAATGACCGGTTTTTTTCGG
GATGTACTGAAAATATTGTCTTCGGTCAACGCAACAGCCTCGCAAGCTGG
GTTGTTACTTGACCTCGGGCAATATTTCTCAGTACAGCCCTCACTAACCG
GTCATTATTGTATTAATTCAGGTTAACAAATTACCAGTTGGTCTAAAAAT
TATAAATTTGAGAAACTATTTGACAATCACATAAGTGGTTGATAATAAAG
TGCTCAGACAGGCTGGAATCAATTTCAGTATACAGTAGTGTCTCCGGAAA
AAAAGCCGAACAACATTTAAATACCCAAAATAAATAATCCTCGTAATTTT
TATGACCTTGTAAAACTGAATTAATGCCCGTTTTATTACTTCGGAAATTG
ATTCTCTATTGAACGAACAAAGAAAATTTTAATTACATCTTGCATAGTTC
TAATACGCAATCTACTGGCAGATTTAACAAAAAAGAGCAAGTACGTCGGA
AACACGCGAAGGAGTGCAAAACGTTTGTTAAAAGAAAATGGAATTACAAT
TGAAAATCTCGACATGGTCTAAAACCATGGCAATGGCAATCTACTTATTT
TTTTCCATTTTAGATTTGATGGAAATTGAGAGAAGACTCAAAAGAATAGT
TGGTAAAAAATGCATGAAAGAAATTCGAAAGGTGGTTATGAAGTTTTATA
CCAAAATGATCGTGACAAAGACGACGAAGACGAAGATAAAGAGAATCATT
TTTAAAAAGACAGTGATGAGATTTATTAGGTAAGCATATCCAATACGCAA
TGTGTCTGCTGAAGAGAATTTTTTTTCATAATGTAAATGAAAATTTTATG
ATATGACACTTTAAGGGCTCTGACCATATGTAGTGAATTTTGATATTTGT
CACGTACAAAATATAAATTTCTGCCTGATGTAGCTAACAAAACTTTGACA
TGATANAGCAAAAATAGGGTCGGTCGTGCCCGTAGAACAACAAACTAAAT
TGGTCTAGCCTAAGCACGTTTTTCTGTTGATGTGTTTCATGTTTGATCTC
GTATTGGTTTTATTATACAGTCAATATCCAAGATCAATTCTGCCGTATTT
TACCAAAATTTATGAGTCTGCCAATTTGCTGGGACAAGTTGGAGTTTTTG
CAAATACTTATTTGATTTGGTTATGGTCGTTAACCCTTAATACAGTGAAC
CAATTGTTACTTTTTATAAAGAACGCGTCATCTATATTACATCAAATGAC
CAATGAGTGAAGTATCTTGTAAATACTCCAGATCATTCCAATTTTCTACA
TGTTCGGAAAAAAAGCGGAACAGATTCTACAGCACCTGACCCCGAGAATG
TAGGTGAAATTTGAATCAGACCTGAGAGATGTAGATTTGCATTTAAAAAA
ATATTGAATGTTTTAAATGAAATTTTGAACTCCCAAAATCCTTTCCCAGG
GGTTAGTTTCATTACTTTTGATAGCTAGGCTAATTTTTTTGGTCCTTGAA
GTTGACTCCCATTTTCGTTATAACCCCCAGAATGTAGGTTTGGTTTTATG
GCATTAAATCTAGTAATAGTAAAATGTTGATATTTTTTCGATTGAATTAA
TTATAACAGGAAATTTTAGAAATATTTTATGCCAAAACAATANGAATTAA
TTATAACAGGAAATTTTAGAAATATTTTATGCCAAAACAATATTCTAAAG
AGCTTTTGTTATTCTGAAAATTGGATTTTTTCGCATTTTAACCCCCAGAA
TGTAGGTGAAAAGATTCGGTTGCTGAGAGCGAAATTTCAGTATTCATCGG
AAATTTTTGTTCTCTAAGTGATATTCATACTTTAGAAATATACTCTGACA
AAAAATTAACAAAGATATTAATTTTATTGTGCTACAAATGATGAAAAGTA
AAAGAAAGGACGAAAATAAGAGACAAGAAAGTTGTTTTTATTTTGTAGGT
TGAAGATTCTGTGTTAAAATATGTGAATAATGTAACCCGGTGGAACTTTT
CCCACATAGGGTCAAACATTTCTACTAAATTCCCAATGGGGATAGAAATT
CTATTGTTCCAAACAAAGGCAAATTTTCCGATTGGACTGGGGTCCCAGCG
GGTCTGGGACACGTCGTAAAAGCTTAAAATGCCAACATTAATCATCTCTC
AGGTAATACTTTCATGTTATGAAAGTACAACAAAAAAGTTTTGTAATAGA
CTATTTTCCACATTTCCTTAGTTCATTAGGAATAAGAAAATACCGTATCA
TCATAACTTAATTCCAATAGATTTCGATTTAGAGAGGATTTATTTAAAAA
ATGTCTCAATTCGAGTAGTATCCAATCAACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTAAAACAGTTCAATTTTTTGCGATCAGTTTG
AAAAAAATTCGAAACGGAAAGGTTAATTATCCATTTAAACTTATCACTTT
TTATAAAAAGAGGGTAATGCAACATATTATAACGTCTTTTTTAAAGTTCA
TAACGTCATTTACTGTATTGTAATTAAATTCTTAATTTAAATGCAATATT
CTTTGTTAAAAGTGTAAAGGAACCTACCTGAAACATAACTTTTATGCTCA
AATACCAAAATCAATTTTTTTACTATGGTCAGAGCCCTTAAGCGCTATTT
CCACCAGTGCGATTTTTTTCATCGCCTTATTTTTTGATTGGAAAAATCAG
TAGGAGTGGATTATCATACTGTAAAGTGCTTTTGAGGGGAGAGGATAAAA
TACACTTTTTATTTGCAAGTTTTAATGTTAAAGATTTTCCCCAGCGTTGT
CCGAGATATTACCATGATAGTTAAACTGGCTTCGCTCACTATTGAGAAAT
TAAATGTATTTCTTGCTTATGAGAGAAATGTAAATGATTTCTTGTATTTT
CCAAGGAAAATGAACAACAAAATTTTCTTGTATATTGAATTAGAACCTTG
ATTAAAACATTTTCCTAAATTTTCCAAGGAAAATTATGCAGATAAAATGT
CTCGTATTTTCAAAGGAAATTTACCGTAAATAATTTGTGTATTCTCCAAG
GAAAATTAAATAAAACAGATGGTAAGGGAAATAATTTAAACAGATTCTTT
TATTTTTTGAGGCAAATCGACCGATAAACAATTTCTTGTATTTTCCAAGG
AAAAAATTAAGATAATTTTAATATGTTTCAAGAAAATTATCTAAAGCAAT
TTTTTGCTACTTTCATTAAGCTGACTTTTCAAGTAAAGTAAAAAATAGTA
GGGTTATTTTGAAAGGAAATCGAATCGAAAATGCCTTTTTTTTCAATCTA
GTGGCAAGGACAAAAGATCTTGCATTGCTAAAATCAACCAAAATCAAGAG
TATCTCTTGAGTAAAACTATTCTTATTCTAGAAGTAGTTCAGCCATCGTG
GCTAGCCATCGTTGGCGGACATTCGAGGGTGATTCTGAAAGACTTTGAAT
GAATAGCTTTGAAAAATGAGTGTTCGTATTTCAAAGCGCTCTTCATAGTT
CACATGGGTAGAAACGTGGGGGTGGAAAGGGAGAAGTTTTCAAAAGGGGG
AGGGTTCATCTAGAAGTTTCTAGTTTTGCAGTCTTGGAGTGAGTAAAAAT
CCTAAAAAAATTCTATTATAACCCTTTTAGTGCTACGGTCTTTTTTTCTA
AGTTTTCTTTTTAAATCTTCTAAAATTTTCTAGGTAATTTTTTTAATGAA
CTAACGTTCAAACTTTAAAGGCGATGAAAAGGTGCCTAGTTCAAATCAAT
TCGNCTTCTAAAATTTTCTAAGTAATTTTTTTAATGAACTAACGTTCAAA
CTTTAAAGGCGATGAAAAGGTGCCTAGTTCAAATCAAACCACTAGAGGAT
AGAATAAAGTAAAATAGGGTCTAAATTTGGAGGTTCTTTGATCACTCGTT
GACCAAAAATGGTCAAAAAAGGTCAAAATCTCAAAAAAGTGAGCTTTTTT
GCTTAAAATCCCACAAGAAAGACTCACTTTTGAATTTTTTTAATCGAACT
TCATCGTTCGATGGATCTCGATTAGTTCGGTTGTCCGATCGGTTTGAAAA
GTTCGATCGGGTCTGGACTATATCATGTTGAATAAATCAAAAAATTCAGC
ATCAAAATAAAATTTTAAAAATTGTGATTGTCTTTGGTTGAGTGCGAATC
AATTTTTCTTTTCGATTGGGTTAGGCAAGACAAATTTTATCTATTGTTCT
ATGGGAATAAATGATAAATAAATAAATTGTACCATCCCCTAAGGGGAATT
GGCCTAAAAATTTTTAGACATTAAAAAACTAGCACATTTAGAATATTCAT
TGCGCTAGCTTCTATGGGAAGACCTTCAGAAAATATTGGTCGGACGGCCG
AAGGTCAAAATCTGNCGGCCGATATGATAGAAGAAAAATGTCTTAAAAGC
TAGGGTTGGAAGGTCAAAATCAAAAAGATTTGTGACATTTTTCTTCTTCG
ATGAGCGATTTTCGTGACATGTCCATTGTAATATTTTACGAGAAATCAAT
CATAACTTGATGAAATCAAAAGAAATCATGTCATTCATTGTATTTTCTAA
ATCGATTCTTTCTCAACCTGTTTCAATTCCATTCAGTCCATGTTCATACG
TTACCGTTCCGTTTTGCTACGGATCGAGTGAGTTCATATTGGAACGTTTC
GGAGCAAGAAAACGGAGCAGTTCCGTTCTGATGAAAAAAGTGGAGCGAAA
TCGTTTCGATCTGTTTTGCTTTGTAACGTCTTCTTTTTAGACGTTTCGAA
TTATTTGACGTTCACACAGTGTTTCGGAACGGTTTCGGAACGGAACCGTA
ACGTCTGAACATGGTCTCAGTCCTATTATTTTTGGTAATGAAGTTGTAGT
AATAACATTCTTTATTTGTTTCGTTTGTACACAGTGTCAAAAAGAGGACG
ATCATTCGGAAGACCACAAATCGAATCATGAGAATCAAAAAAGATGTCAC
CAAGAATAAGAAATTGGGAAGAACTATGAGAAATATTAACAATGCCAGAA
AACAGTGTGCTTTGATACCCCCAAAATGTGAAAAAAGAGCTGAAAGAGTT
ATTAGAAGGGCAGCAGGAAAAGTCCTTCAAAATTCAGTAAGTAACTAAAT
AAAAGGACTAGAAGGCTCCTCTTTCGATAATAGCTATCTATCCAAATGTA
GGGGAGAAACAACTCTTTCTCGCTCCCTGGATTGCTCAATATGACCCTTT
ACTTTGATTGCTGAGCATTCAGCAGGGAGTCCTAAGTACTACTCTGTTAT
CTTTGATATTGCGGCTCACATTAAAAAGGTTTACATTTTTTATTACTTGA
CAAAAAGAAATAACTAGACGGTTCCCTTCGTCGCAAACGCCGGTTTAGCA
TGCGTGGGGGAGGATATTTTTATTCCAACCCCCCCCCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
TGATAGAACTTATCAAGGGTCCCCCCTTTACTAACGGTTTTTTCGAAGTC
TGAAAATCAAATATCTGAGGCTACCAACGGATTCAGCGTGAAAAGTAGAA
AGAGAAAATGGGGTTATTTGTTAAGTTTCGACCACCTGTTACCGAGAAAT
GGCATTTTTTAGGCGAAAAATCGACGCTTTTAGCGTTTTCCGATGACGTT
TTTCTAGAGGGATTTTCAGAAAAAATCTTTATCACGGCTGGATAGCCCTG
AATTAATAGTATCCAAAAATGGTATGGTTTGTCAGTTTTCGATGTCTAGA
TCTCGAGATATTTTGGTTTAAATATTGAAAATGATCGATATTTTTTCCTG
AGTCAGCAGTTTTTCAGCTTATTTACCCACCTTACAAAATGAAATATCTC
AAGATCGGAACATCGAAAGTTGACAAACCATACCGTTTTCGGCTGTTCTT
ATATCTAGGGCAAAGTTGAGACATTTTAGGCTTTAAATCCAGTTTTTAAT
ACTTTGACCATTAAATGTTCTCGAATTGCGTTCTTATTTTTCGATGATTT
TGAGCCTTATATTGTTCTTATAAAATTATTCTTACTAAAAAGAGTTTATG
ATTCATCAAAATAATCATTTATTTCTTGTTAATTGATGATAGAAATACAA
ACGATTCTGTGGTTAATATGTTTTGGCTGAGTTGCCTTCTCCTCAGTTTC
GGTTTTTTCTCTTTTATAAAGGGCCAGGGCCAAGTGCCAAAAATAACAAG
AAAGCAAAAAGAGCCAATCGTAAAAGAAGCTCAAAATATTCTAGAAAATG
AACCACAAACGTTAGAGGGTATGTATGTTGTATTATTATTTCTTTTAACT
TAAAGTTCGTAGCATTTTCTAGGGGACACGGAAACAAATCTTCTCGGGAC
ACAAGTCGCATGGATATGTTTCATTGTGTCCCCACATCAGATATCGCTTT
TTTGCAACATTTTCCTCTAGATGTTTTTGTTGCTGAAAGAAAAAGAAAAA
ATCAAACCAGTTAGTTAATATCAAACAAATTCATTTTTATTGCAATCGCA
CAAAAAATGTTTCTGTGTCCCCAAAGCTTTAGCCTATTCCGTAATGGAAA
GCTGACATTGTCCATAAATTTGTTCTTAGTTTATCGCAAAAGAACCTCCT
GTTCTCAAAAAAAATATGCACTATTTTCTTTCATTATGAAGACGAAGACG
AAGAAGATGAACCAGAACCAGAACAACAAAAAACACCAAACAAAATTCTC
GCTATCTCGGAACCTCAGAGCTTACAAAGACCACCAGCACCTCCTATTCC
TATTCCGGTATGTTTATCGCCCAAGCTGACACACTGACAGTAGTTCCAAC
GGGAGGCCTCGATAGTTGGTACTTAATCTGAAAACTACGCTCCAAAAATT
ACGGACAAGAATTCGGGCATCAAAATTTAATACAGTAAAGAGAAAATTTA
ACCATATTTGAGCAAATTTTGGCAATAAATTGACCCTACCGATGCATCTT
TGAAAGTTTTTGTCCATTCTAAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00003191	TCONS_00003191	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00003191-protein	TCONS_00003191-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000025	supercontig	sc0000025:537568..547590 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0	0	0	0.1	0	0.32	0.13	0	0.08	0.34	0	0.2	0.15	0	0	31.9	32.06	0.08	0.37	13.62	13.42	2.06	1.39	20.77	14.9	0	0	0	0

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XLOC_001760 (gene) - C. hemisphaerica