XLOC_001936 (gene) - C. hemisphaerica

Overview
NameXLOC_001936
Unique NameXLOC_001936
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:346371..351183-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001936 ID=XLOC_001936|Name=XLOC_001936|organism=Clytia hemisphaerica|type=gene|length=4813bp|location=Sequence derived from alignment at sc0000028:346371..351183- (Clytia hemisphaerica)
GATATATATTCCCAATTTTTTGAGAAAAAAAACAGCAATATATATAATGG ATCCTAAAGAGCAAGAAGAAACTGATAGGGTGAATCTCATTCACAGTTTG AAGAAACGTGTTCGTATTGAATATTCAAGGATCTGTCGACATCGAAGACA GAAAAAAGCAGAACAAGCCAAGGTATGCTGCTCGCTTTTTTGCTTTCATG CGTTCTTCTTTTTTCACTGTTATCTAATTCTAAATCTGTATTTTGTCACT AACATCGTCAACATACTTTTATGTAGATAATCTTGAATATTGTGGAAGAT AATCATTACAGACCTTTAGGTACTTGGATATAAAAGCACAACATGTGATA TCAGAAAATTTATACTTACTCTGCAATCTCAGAGCAGTCTGGTTGATACC AACCATTATTTTGATTATTGATAATTTTAGATAATAACAAACCTAGAGTA GACAGATGTTTTTTCTGCATCATACATGATACATTGTAAAAGTTGTTTGT TCAATAAATATCTTATGTTTTGGTAGCTTATATATTTAATATTACATACA TTTCAGAACAACTACAAGACAAATAGGGGTAAAACAGCTGAATTGTTGCA GAAAAGACAAGATTTACTTGAGGAAAGGCGAGAGCTGTCAACCATTCCTA TTGCTGCACTCACTGAAGCTACAACAAGAAAGGTAATTTAACTAAAAGTA TGCTATATGCAATTCCTATTTCTTCTAAACATGTTTGAAATTTCTTAACG CTTATTAGTAGAGGGAATTTTGTAAAATCGCTCGACTGTTTTGTTAGAAG CACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAATTAC TATGTTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTCCCCTA CCCCTTAGCTTTCCAAAAATGTATAACAAGTGCTTCTAACAAAACAGTCA AGCGATTCCAAAAAATCGAACAAAATTCCCCCTACTATATGCTAAAATTG AAAATTAATTTTCAGAACTTACTGTTCCATATGGTAAATAGTTTCTTTGG CTTTATCATGTAAAGTTGTGAATATTTACTCCTCGTGAATTACCATACTT TATTTTTTACTCTATCTTCAGCTATTCCAAATTCTCTTCTACTTTCTAGG CTGTCATTCATAGTGGGTTCAGTTATCCACCACAGTGTGTGAGCTTGCAG ACTCTGTATTCACCACCTGCTCTCCCTACCATGATTGCATGGGCTCCTCT GCAACAAAACTTCATTGTGAGTTATCTTTTACCTTCAAGCACACTCTATA AAACCCTTTGAAATATGACCTGAAGATATTTGGCACGAAGCAGCCAGTAA CAGAATAAAATATAAAAGTTGTCCGATTTCTTAGGCTATTTTTTTTTTTT TTTTGCAACAAAATTTTATTGAAAATTATGATTTTAAACATTGCTGAAAT TGAAATAGAAATCCAAGCTCAACCTCTGTCAGAGTAATATCTGTACATCA AAAGAATTTTGCTTTGTTTTGTTCATAAAGGAAGACCCTCGAAAAGTTTC TCTGTATATTATAACTTAAGACTTGGCAGTCAAATCAGTAATAAACCAAA CAACACTTTCTCAGGTTGAAGATGAAACAGTTCTACACAACATCCCATAC ATGGGTGAAGAGGTGATTGATAAAGATGGTCAATTCATTGAAGAACTCAT CAAAAATTATGATGGAAAAGTACACACTTCTAGTGCTTTTGGTAAGTCGT ATTTTTAATTAAATCGTTCTTGCCAAGATACAATTATTTCATATTATTGG CAAGATAGCCCTTAGAATTCATCTGACGTGCTGAAAATGAGGTAAGAAAG AATGAACATGTTTACTTCATCTTGCTGAGACTAGTTCTTTTAAGTTATTA CACTTTCCATGACTTTTAGATGGCATAATGGACGATGAGATGTTTTTGGA GTTGCTTCAAAACATGCTTCCATATCAAGATGAAATAATGGATGTGCCAA CTACTGATGATAACACCTCCATGGATGAAGATGATGGTTGGTTTCTTGTT GTAACTATGATAAGTTTTTACAAGCCTGGTGAAACAACAATAAAAGTGGG GAGGCTGAAGGCTAAAAATAAGATAAAATTTGCACGTAATTTGAAAAAAA ATCTTATTTGCTTAAAAGTGAGTGGGGAGGCTGAAGTCGGGCCTGTTTTA CCATAGTGCATTGGTCAAACATTTCATTTAAAAAAACATCATTGGTTTTT GAAGGCAAATTTGATCACCTTTGAAAACCAGCTGCACATTTCAAAATGCA GGAAAGCCATACATCTGGATTAATTGGTATATCTTTAATACCAGTTACCT GATGTATGCTCTGTTGCCATCAGATAACAATTATTCGAATTGCTTTTAAC CCATTCTCTGAAAAGAGTAAAGACAGCTTGAGAGAATATTTACTTTCTTC GTTTTTTCAGAAAAGAAACCCATGCCAATATCATCATCAGCTAAGAATAA GGAGCCGGATCCAGTCCTTTTTGAAACAATCGCTCAATATTTTTCGGAAC ATGGTGTCACAGTTGAGGAAGTTAAACAAAGGTATTATTGTTGCAAGTAC ACTGGTTAGTTATATTTATTCACAGGTGGTATTTGTCCTCCCAAGGTATA CAGCTCAATTTTGAAAATGTAAAATGAGAATAAATCACATTGCTGTGTGT TAGTGGGGATCGCTTGTTGTAAGCAGATGCAAAAACTTGCTCATCTGTTG CTTGGGACAAGCTGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCG TTAAGATGTAATAAAAGAATCTTATTACTTTTTCTAAAGAACGCGTCATC TCTATCACTTCAAATGACCAATTAGTGAAGTATCTTGTAAAAACTCCAGC TCATCCCTGTTCCTTCTTGAGATCCCAAAACATCATCAAGTTATCTAGAG TGTATTTAGAACTCAATAGAGTTAAAAGCTGTAAATGTAATGTTGTGTTT TATTTTTTGTGTTAGATATTTGTCATTGAAGGAAAAATCCAGTGTAGAAC CTCCAGAAGAGTGCACACCAAATATTGATGGGTACGATCTTGAATTATTT TTCAAAAAGCAATATGGTATATCCAGATATTATCTTTGTTTTGTAGATTG ATTTATAAAATGTAAGACAAGGATTATATAAGCATTTAAAACATCTACAC AAACAAACTTTCACTTCAGATTTTTTTTTTTAATATTGAAGTCTGAAAAA TCTTTATATCTACTACATTCCGACAATCAACAAGGAACGACCAGAGACTA ATATTTCAGCCATCGACCATTTCACTAAATTTTCTCAACAAAAACATAAA TTTTATTTTACAGACCTGATGCTATTTCGACCACCAAAGAAAGAACAATG CATTCTTTCCATACTCTGTTTTGTAGACGTTGCTATAAATATGATTGCTT TCTACATGGTATTTTGATATATTTGTTTGTTCTTTTAATGTATTGTTCGG AGAAATGCGGCTTTTGGGCTCTTCCAGAAAATGTTAGTACATGGTGGGTG GATGATATAATGTGCGGGGGTAGTAAACTTGCTCTGTTTGGGGGTTTTTG CTCTGTTTGAGGGTAATTTCAGCTCTGTTTGAGGGTAATTTTGCTCTGTT TGAGGGGTAATTTTGAATGTCCAGCGAGTCAACTGATGCTTGTCCAGGGA GCTAGACCTGCTGTCCGAGGGGTCAAAAGTCTGGGGGTAAATTTCCAAAA AATGTTATATCCTCCACCCCCCATATTCAAAATTTTTCTGAAAAAGCCCA TTATTATTTGATATTTTCCGTCATGTTTCAGACTTCTTATGCCTTTAAAT ACAAAGTCATCTTATTCAATCAGAGAATTTGGAACAATTCATTTTGCTTT AACAGTTTTGCTTGTAAATAAGACAAGAGTGATATCGTTTGCTTACTCAT CAATTTTAATTTACAAGCTACAATGCTAAGAGCTATTAGTTTCATTGGAA TCTAACTCTTCAAAATACTTTTAATTTTTAGGTAATAAAGTTGGCCCGTT CAAAGNGTGCACAAAGATGCGTATTAGCAATGCCCAAAACTTGGCCGAGT CCGATTTTTGAGAAAAAATCTTTTTCGGTCGAAAATGCCGGAAATATGCC GGAAATCGCTGTTTTTGCAGATTTTCATCGGACTTTTTCCTTAAATTTCG TTGTTTTTTCACACAAAAACATTATTAATAGCAATTTCCACGATCAAGCA TGATTCAATTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003484TCONS_00003484Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003484-proteinTCONS_00003484-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:346371..351183 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.88 21.68 22.86 21.27 34.73 29.64 25.84 26.5 19.61 22.32 21.31 14.42 15.35 17.3 19.04 25.43 20.72 22.55 11.43 11.39 14.03 15.45 31.72 29.82 28.3 29.55 7.19 6.85 30.34 34.68