XLOC_002029 (gene) - C. hemisphaerica

Overview
NameXLOC_002029
Unique NameXLOC_002029
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000030:620925..631245-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002029 ID=XLOC_002029|Name=XLOC_002029|organism=Clytia hemisphaerica|type=gene|length=10321bp|location=Sequence derived from alignment at sc0000030:620925..631245- (Clytia hemisphaerica)
CGGCGGGTGGCAAGCACCCCACTCAAAGGATTAATGCGCCTGCGCATTGG CGAAATTCTGGAATTGCGCGCGCGAAAATCCATCAAACTGCTTTTAACCA GTTTGAGTTTACCATTGATAACGCCTGCAGTGAACAGCCTTTCTTATTCG GGTTGAAGCATCGAAATCTCATAATATCTGGACAATCTTTACACATTGTA TACAAAACAACATAATGGCAAATACCGAAGATGTCAAAGCTAAATTCAAG GTAACAATTTCACTTTAAGGGTTGAAAATCGAGAAATTTCGGTGTTTTAC TCTGACAGCTAATATTAACTGCTTAGCTCAATTTTAGAAATTCTCTCTCT TTGAAGAAAAGGAGAAAAACTTGCACATCTCACTTTTGAACATCATCCAC ACTTCTTCTGTCTGAAAGAACAGTGCAGTGGGGTGTTCAAGATAAAAATA ATAGTTATTGGCTATTGCTCTTTTCTGCAAATATTGCCAAAAGCGGCAAT ACACCGTTTAGGAGTCTCGCCATTTCACGGTACTCCATTGCAGAGGCCCG GTAAAAATGGTAGGTAAAAATGCGCACTTTAGTACTGTGAAAGGTTANNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNATTTCCCTTCGGCATGTTTTTTCAGAATT TTTCTTCAAGTCGCCATTTTTTTCGAAAGTTTGTTTTTGTTTTGTTTTGA AAGTGGCGGTCTATGGAGAGTCTTCATTTGATAAAAACGCGGGAATTTTT TATATCTATTCCAGACTTCTTTTTTTCTCTTCGCGTCTGGAATGTTTTGA TCGCAATGTAGAGTCTTCTTTTTCATTTTTTGAGTTTGGTCGGTCGCAGA CTGGACGTCAAATTTCGAAGCTGATTGCATCAACTTTTTTATCAATATTT CAAACGAAGGAAACTGTATCGAGCTGATTTTTACGGAAATGCTTTCTAAC ATATTTAGCGTTTTGGACAAGTATTTTTTGGAGTGGGAGTTGAAGCGTTT TTTCTTACGATGCTTTTTTGTCCACAGGTAGCCATTTTTTATTTTTTTCG AAAAATCCGGGTTTTTCATGTGCTTCCGTGCAAAGTTGGATCTTTCGGAT TCTACTCGTTCTTTTCTAGAACTTTTTTTACACAGTACAGGAAATAGGTC AAGGCAGATTACTACCAAAAGAAATTCTTAAGAGGTTTGTTTTTGCATGA CTTTTCTGGGTTCAAAGACGTTCGGTCGCCAACTAGACCGGTCGCCAACT GGGCAGGGTACTCTATTTGTTCAACAATGAAATGGTAAATCAGCAGAGTC TGGCGACCTCATCATGTGCGTTTGCTTAGGGTGAAATTTGAAATTGGCTA TTTCAGAAAAAAATTGGATTAGGCATTAGGGGGTGGAAGGATAGGAATTT TCAGATAGAAAAGGAAGTCCAGTTATTTTCAAAGCACAATGGAAATGCTG CTTGATTTTTTATTTAAACCCATGGAAATTCCAGTGTGGAATTGGTGCAC AGGCCACGCCAAAGGCGTAAAGACGATGTTGAATTCCTACGCGGAGGCGA AAATTTTTTAACGAAGGGAAAATTTGTTCGCCGCAGGCGCGTTTTTTTTA GCAGGGGGGTTTAGGGCAGGGGGCGCTGTTAGCCCCCCTAGTAGTCGAAG CCCCCGAAAACCCTGGGATGTTAAGCATTTTCACGCCTGAAAGTTGGCTT AGAATCTACTATTTTTCCTGGTTTGATGATTGAAAAAACTTGAAAGATAT CTCCAGGGATTTTTTCAAGCACTTTGAGCTACTACCGTTTATGTATAATT AGATTGAGTTTCAGATGCGTGACAAAACGCGAGCGAAGCAATCGCGATTT GGAGCTGTAAGAAAATTTGTTACTCCAAATTTGGCCCTGGATTGCTTTAA ACAAGAACAAAACGTGAATACATTAACGCCGCTTAATTAAAAATAGAAAG ATTTTGGCCCATTTTACGGCGGTCCTTTTAACGCCGGCCCTTAATCACGC CACGCACGAGCCCAAAAATAACACCAATAAGGGCCGGCGTAAAAAGGGCC GATTAGGCCGATTACCTTTCCCGAATTGTTATTTAGGCTTTTTGACTTTT TTGTTTTAATGTTTGAATGTTTCTATTTAGTTTCATAAAATTGTATGTTG CAAAACTAAACAAATAAAAAAAGAATTATGAAAAAAGCACTTCCGTTTCT TGAGTTATTTTGATTTGAAATTTCTTTATAAACAATAGAATTACATGGAA ACGAGGCCGGGCTGTATGTTTTAGTTTTTATAAGGGATTTCACCTTGAAC AAAAACAGTCATAAAAATTGATAGAAAAAAGCTTTCGAGCTCAAATTTTC AGCATGCACTTGTGTTTATAGGAGAAATACAAATATATAGTTTTCAATAT GGTTTGAAGACCTTCGAAAAAAACCAAACAATTCGGGAAAGGTGTATAGA AAGAGTTGTGGCAAAAGCGAAAGAAGAAATAACAACAAATCTGCTTTTTT TTAGGAAAAAATCTACAAAAGAATTTACAAGTAATAATGAGGATTCTCTT AAAAATTCATTTCATCAAGAACAAATCTCACATACACCCCTGTCTCTTAC TCTATTCTTTATCAAATTATGCGTGTTTCAAAGATCACTTTTATCAAATC GCGTTCTTCGAAACTTTTAAGAGTGTTTCAAAGATCACTTTTATCGAATC GCTTTTTTCGAAACTTTTAAGAGTGTTTCTAAGATCACTTTTATCAATTC GCTTTTTTCGAAACTTTTAAGAATGTTTCTAAGATCACTTTTATCAAATC GCTTTCTTCATAACTTTTAAGAGTGTTTCAAAGATCACTTTTATCGAATC GCTCTTTTCGAAACTTTTAAGAGTGTTTCTAAGATCACTTTTATCAAAGC GCTTTTTTCGAAACTTAAGAGTGTTTCTAAGATCACTTTTATCAAATCGC TTTCTTTGCTTCTTCACTTTCTTTTTTCGCTTTTTTCGAAACTTTTAAAA GTGTTTCTAAGATCGATCTTATCAAATCGCTTTTTTGTAACTTTTATGAG TGTTTCAAATATCACTTTTATCAAATCGCTTTATTCTTTGTGACTTTTAA GAGTGTTTCTCAGTTCACTTTTACCAAACTATCCACTTTCTCTATTACTG CAGCGAGTATTGTCCCAAGGTCACTTTATCTATAGCTTTACGTGTAACTT TCAAAAGCTAGCTTCTTATAAACGAGGTTAGAAAATATATTCTGCTAGTT GAAAAATTCCGACGAATGAATGACCGAGAAGATTTTAAGTTTTATCGACT GGATTTGATTTCAGTCGGACATAATGTCCGATTGCAGTCCTGCATTGTCC AAAATAATAATAAAGAATTTCAATGAGTGGGGCAGAGGTATACCAAACTT CATTTTTTATTAGGTTATTCTTATACAGGTTTTCTCTAAAAGATTATTAG TGGTAGGACAGGGGTATCTTCAAAGTTTTTCTTTTAACTTTAAATAGTCT GATTTTGTTTTTCAAATGTTGATTTGATTTGACAAGAAAAGTTCCTAAAG CTTCCTTATACCTCATCGACCCCGAATAGTTCTTTTAAAGCAATTTTGCT GTAAATCTGTAATGACTTTTATTTCAATTTTGACCCCTTCTATAAAGTTA TCCTTTTGAAAAAAACTTTAATGAAAGAAGTAACTCAATAAGTAAATTCA TTCCCCTTTCCAAAAATCCAAGTAAATGCAAAATAAATTTTCTTAGAAAT CTTTTCCCATTAAAATCCATTTGTTGCGTATGTTAAACCGTTTGTGACAA ACGGTTTTTTGAATGATTCTTTAAAAGCATTCGCGGCAAACGGAAAAGCA TACTTCGCGTATAAACGGTTTTTTGAATGATTCTTTAAAAGCATTCGCGG CAAACGGAAAAGCATACTTCGCGTACGGTTTCATATCTCAAGTTTTCGTA AGCGTTCTTCACGAACGGTTTTCTTTTTAGGCCGTTCGTCACAAACGGGT TAAAAAGCATAAGCGAACGGTTAACCCGTTCGTCACGAATAGAAAAGCGT TCGTGTCCAAATCGAACGGTTTCTGACCCAGTAGTGTTGTCTTTACTCTA TACTGATTAAAAACAAACAATTGAATTGGCGTTTCTGAGAAAACTGCTTT GAAACTTTTTTCTTGTAAATTTTTTTTTANGTCCGAATCGAACGGTTTCT GTCTGACCCAGTAGTGTTGTCTTTACTCTATACTGATTAAAAACAAACAA TTGAATTGGCGTTTCTGAGAAAACTGCTTTGAAACTTTTTTCTTGTAAAT TTTTTTTTATATTTCAGATTGAGTTTCATAACCCAATCTTGGATTGAGTA TTTTTGCCGGTATACGGTAGTAAAAAAGTGCTTAGAAAAATCCCTGATAT CTCATATTTATTTAATAAATTCTGTTCGGAAGAAAGCGATACAGCGATAA AGGGGAACGGTAAACTGCGATCTCACGGGCGGACGGGTGGTTTCTGAGGC GAACGGTGTTATTCTTCCGCTTTGTCATCCGTGTTCGACTTTTTGCTTGA AGCTGAAAGAGAAACAATCCGGCGTATACTGCCAATGAAAATGCGCTATG CGTAAGATAAACATTGTGCATTAGACTAATGATTTATAATCGGATGAATT TCGGGTGAACAACAGATTACTGAGAAGAATGAATCGAATATTGCCGTTTG CTAAACTTATCGAAAATGGCAAGAAGTGCTCCTGTGTTCTGTCGTCGTGT GTTGTCCTGAAAATAAAAATTTGAGTATCAGTATCTTACTTTGTAGCTGC TCCTTACGCCAATACGCCAAAAGGAATTAGAGCCTCACGCCGAATATATT CGGAGTAGCGTGCACCATTTCCAGACTGGTGGAAATTCCTTAGAATTTGT CAAAATGCTTAAAGAAGCCAGACTGTCAGTGCCTATAGTAGCCAAATTAG GAATATTTTTCTTATTTTTTCCTAATTGGGAAGAAAAATATTCCTAACTT AGGAATATGGACAAACAACTAGATTAAAAAATTGCACGTTAAAAAGTACT TAATAAGATTCTTACCATTCTAGTGGGAAAGAAAGATTGAGCTCTTGAAT TACTTGGGGGACCGATCTTTACTCTTGTCTCCCGAATAGACGTCCCCCGC TAATTGTTAAGAGAAAAAAATCCATCCACCCTGCTCTTATTAAGACTCCC CCCCGCTAATTAAATTCGAATAATTCAATATTTTATTACAGTGTAGATAG ACCTTAAACTTGTTAAAATTTTCCTTTTTGTTAGTATTGTTTCTTATTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCGTCCAGTGCTGCA AATAACGGCCGATGACCGGTCATTTTGTAGTTTCTACCGGTCATTCTGAA GCTCAGTTTTTCCATTTTGTCCGGTTAAAATTTTAGATTAGAGGCTTCTT AATAGCGCTTCTAATTAAAAGAGGAGTTTTTAAATCAAAATAGGTGTTTC AGCCAATCTAAAGGTCATTACAGACTAATATGGACCAGACCCCCTGCTCG TTACACTCGAAAATTTACCGGCCAACTGAAATTTCCCTATTTGCACCACT GCCCGTCTATTCAGGAGACAAGAGTAATTCCTAGAAATTTTCATTGTTAT GTTCAAATACCTAAATCATTGACAATAAAAAGGACAATATTTACATTCCT CTAACCTTCCACAGTACTAAAGTGCGCATTTTTACCTACCGCCTTCACGG TGGAGATGCAAGACTTCTAAACGGTGTATTGTAGATGTAATGCGAGAATT GCAATCGAACCAATCAATGTAATCGAATATCAATAATTTGATTGTGTGTT TAGTTGATTCAGCATTCAATTCTTTCGATTGACACCTTATGCCACCTTCA TTTAACTTCCTTTATATCTTGTTCTTCAGAAAAACCAAAGATGCCTTTTT TGCTGATTTAGCATTTCATTGTTGAAAAATAGCTGTCAATGATTGTAATT TTTATCTAAAACACCCCACTGCAGAATCTCTGAATCTTGCTTTTTCTTCT AGCACAATAAAAATTGCTTACAGTATTACCATTTCAACAATTTAAAAACA GTTCCACTAACACATTTTTTTGTTGCCTGTTTTGTTTGGGGTTACTTCAT CTGTCCTACAACTATCACATCTAAAAGCAACCTTTCGAAATTCCAGAATG GTAAAAACCGCAAACATTAGAACCCGCGAAATGCAATTTTTCGTAAATTT TTTTGACCGCGAAAATTAGTTCCAATAAGGTAATTGACGAGATTGACGAG CGTTTTACTAAGCGCGAGCGCGATCGCGCACATCTTATTGAAAAGCATGG TATACCTTATATGGAAATTTAATTTTTTTCTCTTTTGTCTTAGCTTGTTC TTGTTGGGGATGGAGGTACTGGGAAGACAACCTTTGTTAAAAGACATTTA ACTGGAGAATTTGAGAAAAAATATATTGGTTTGTATTTTTTTCATTTTAA TTGCTTTCTTGGCTAATAATATTTTGATCTTAAACTTTTTTCAAAATAAA AAAAACGGGATCTGTTACCCAAAATAGGTAAACCCTTTGATATCCAACAT TTTTTACTACCTGGTTCAGGTAAATGAAGTCTTTTGCAGTGTCACCACTA CATTCCACTTTTTTTATGGCTTACTCTTAGGTTCCAAATAAACAGGGGGG GGTTCAAATAAACGGGAGGGTTGGAAAATTTTCTAGATTGTAATAAACGG GGGGGGGGGGGGGGGGAAATTGTACTTCTGAAACCCAAAAATAAGGTAAA AATAGGCTAAAATCAGGCTATTTAGAGCAAAATAAGGGGCCTTCTCTTTG ACAGCTGAAAATATTCCTAGAGATTAATAAATGGGGGGGTCCTAATAAGG TCCGGGGGGTTGGAAAATTTTCGAAAAATTAACAAGCGGGGGGGGACGTT TATTTGGAACCTAAGAGTATGCTTAAAAATGCATATTAAATATATTCTAA ATTTGTTTTTTACTTACCATTTCAGCTACACTTGGAGTCGAAATTCACCC TCTTAAGTTCTACACAAACTTTGGTCCTATTCAATTTAATTGTTGGGATA CTGCAGGTCAAGAAAAATTTGGTGGACTTCGAGATGGCTATTATATTAGA GGAAACTGTGCTATTATCATGTTTGACGTCACTGCTCGTATTACATATAA AAATGTGCCAAATTGGCATAAGGATTTAGTTCGTGTATGTGAAAATATTC CAATTGTTTTGTGTGGAAACAAAGTCGATGTAAAAGAACGTAAAGTCAAA GCGAAATCAATCACATTCCACAGAAAGAAGAATCTCCAGGTGAGGTTTCA GTTTTTTTAATAAGCAACTAGGGCTCGAGCCCTTAAAAATTAGCCAGATT TTTTTCACTATCTCGTAAAGTAAAAGCTTTTTAGTTTTAATCCAAGCATG GCAAACAACAACCCAATAAGCATAAATATGGTATAATATCAGGGGTGGTC ATAGCAAATTTTTCAGAAAATGAGGTTAGAATATCGAGCAACCCCAGGCC TGACCCAGGGGGGGGGGTGAAGCAGTTAGTACAAGACATCATGCCAGTTA GTACCGTGGTGGTGTGCCATATGAATTGGATAAAATCACTTAGTACTCAG ATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTTTGGTACTAACTGT GTAAAAATAGGATTTTGTGAGAAAATTAAAAAAAAAGACCGTATTTTACC AAAAAGAATTTTTGGGAAGTAGATTTTTTTTCAAATCTTAAAAACAATTT GCTGGTTGCAATATAGCCCGGGGTCCACTTAAAGCTTTTTGATAGACTGG ATGGCGCGATTAAGTGGCCCGGTAGTATATGGTAATATACTTTTGCCTAG GCGGACTGTAAAACAGTCCGCCAGATTTTAGTTGTTTTTGGAAGGTAAAA ACAGTATGAAGCAATGTTTTTATTTGAGAATAAGGAATTGCAAATCTGTT ATTGATGTTTGTTTCTCATTTTTGATTACATCTTTCAACTCCAAGTAGTT TTTTTTCTTATTTGGATTTTAAACATTCTTTTTCAAAATGGCGACCTCGC CAAACGCTCCTAGTCTACTTCACTGGACTCAGCGTCATCAGAAATTATCA AAAAGCAAAGTTCAGCCAGAAGTAGACTCTAGTCTAGTTGCAATAGAAAT TTGATTTTCTAAAATGTTGTTTTTTCCTATTGAAAGCTATGGAAAATTGA ATCATTTTTTTTAAGATATTAAATTTTATTTTATTTGATTTTATTGAATT TATGAAGGTCAAAAGCCTTTTTCAAGGCTATATTCAGTTAGTACTAACTG TACTAAGTGTACCAAGGTGGTGGTGTTACTAACTTCTTCCGAGAAAGCAG TTAGTAGGCATGATGTCTTGTAATAACTGCTTCACCCCCTCCCCCCCTGC CTGACCCAAAAAATGGAGCTTGCTTATAAAAAAAGATGTGTACTGACTCC TTGTAGGAGACGTTTTTCTGGTACCCCAATTCTAATGCAGTTGTGCCAAA ATGCAAACGGTATCCCTTAACAAATAACTTTCTTTCTTGCTCTTTAGTAC TACGATATCTCTGCCAAAAGTAACTACAATTTCGAAAAACCCTTCTTATG GTTGACACGTAAATTGACCGGTGAAGCTGAATTGGAATTCGTTGAAATGC CTGCCCTTCAACCACCAGAAGTTCAAATAGACCCTCTTCTTCAAAAACAA TTCGAGAAAGATTTACAGGAAGCTCAAAATTGCGAACTCCCTGATGACGA TGGGGATGATATCTAAAGAGGAAGACAAATTCAAATAATGAGAATTTTTC GCAATGGTTTAGTTTGGTATTTTATAATATTTCCAGAAGAAAGTGCTACA TTTCAACCCCTAACCATCACACGATTGGTGATAACAATGTTCTTGTAAAA TGCTTATTAACACAGAAGAATGAACTGGATATGTCGATAATAACACAACA TTTCATTTGTACATAACATTAATGACCTGATTTTATCGCTTTTTCGATAG TAAACTTGCAAGAATCTAGCGTTCCACTTTTTAAAAACTCCTTACATTGA ACGTTTTTTGGATAATTATTTATTTTTTCCAACACTGTGCATCAACGAAG TGTAATTCTACCAATGAAAATGTCTTACAATATGATCCAACTTTTCATAA TACATTAAAAGATCAAATAATAAAGATTTCCTATCTTCTCCTATCTTTTG TATTGCATCCTTAAAACTTTTTACCATTGAAATTACAAAACTGGGATGTG ATATTCTACCGTTTTAATCCCAGTTTTCTTCTTTTTTGCGAAGTTTTTAA GTGAGGAAGTATAATAAAAAGAAAACTTGGATATACAACAATAATTGTAT TCTTTTTGTCTTCGAAGTGGTCTCGACCCATTTCTACATTAGTACTAGTA ATCGTATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAACAAAGAAA ATAATAATTTACAGTCCGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003662TCONS_00003662Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003662-proteinTCONS_00003662-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:620925..631245 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RANGTP-binding nuclear protein Ran isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1570.32 1595.33 1531.91 1573.92 400.94 309.82 417.52 429.5 471.23 323.74 460.63 484.36 588.88 557.47 597.37 554.58 557.32 613.88 290.42 308.55 695.9 663.04 1000.83 897.97 745.34 841.58 466.47 448.06 544.75 609.19