XLOC_002033 (gene) - C. hemisphaerica

Overview
NameXLOC_002033
Unique NameXLOC_002033
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000030:766564..776135-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002033 ID=XLOC_002033|Name=XLOC_002033|organism=Clytia hemisphaerica|type=gene|length=9572bp|location=Sequence derived from alignment at sc0000030:766564..776135- (Clytia hemisphaerica)
TTTAGATCAAAGTAAAACAGATCAAAAAATCAAACTTACATAGCCGCAAT
CTTGAAATGACATTGATGCAATGCTATTACCGAATACTCCACTTGGTTTT
GATTTCTCTTCTACTGTTGATACCAAATCATGTTTTCGCAATTTCCACGC
ATCTAAATTCAAAGGTAAGAGTAGTGCGATTAGTTCTATTGTCTATTGTC
GTTTGAGTATCTTATCGGCCCTTTTTACGCCGGCCCTAATTTAACACCGC
GGCCCCTTTTACGCCGGCCTTTATTCCGCCACAGCCTAATTTTGGGCTTA
CGCCAATTAGGGCCGTAAATAATGTCAAAACTTGTAAAATAGGTATTCCA
GGCTTCAAAACAGTAAGTATTAACTGAAACTTACATTAAAATGTCATCTG
TCAGTATTAAACTGTTGAAAATTCCATTGAAAATCATTGATTTTCCTTTA
ATCCTGCCTAAAATCCTTTAAATGGAGAAAAAATGGTCAAAAATTAACGT
CGCTTTTAGGTAAAATTTGCAAAATTTTGGCCCTTTTTACGCCGGCCCTT
ATCACGCCATGAGCCTAAAAATAACGCCAAAAAGGGCCGATAAGGTATAC
ACCTATTCGACCGTAGCTACCAATTGCCGCGCGAGCATCTTTTGTCCGTT
TTACCACCCTAAAAGTCTGTTCAGTCTTTTTTTCGCACCTATAGACAATA
GAAAAAGGTGTCAAAAAAGGATTGGATCCAGTTTAGGGGGATAATTAAAT
AACCAATTGGCACGCTCTAGATCGCCCGACTATGGTCGAAAAGGTGCATT
GAGTCCTTAAAACGAGCAAAAAATGAAACCGGTTCTAGATGAACTCAGCA
TGGTGTACGGATTTATGAAATAACAATGCGAATGTCACGATATCGTACTT
TCTTACTTCCTTCATCAAGCCTCGATACCATAGATTTATAACGCCCGAAG
GGCTAGATGTCAAGCTTTGGCTGAACAAAAGTGTGCCGAGGTTAGGTAGG
AAATCCTTTTTTTTTTTTTGCTTGGAAGAGCTAAAAACACGACATCTAGC
CCTTTGGGCTTTACAGAAACTTGTGCTCAATACCCGGGTTTTGACTTAGC
TCTCTGTTTTGGTTTCATGTAAACAGCATGAAGAAAGCAAACTTTCTGAT
TGGATGATAAGTTAATGTGTGTAGTTTTCAACCAACCAGATATTTTTTTC
GTGCAAATTACACGAAATCAATGCAAAAAAAAACTACTCTGTGTATTTAG
TAGTTCACTACAAGTTGAGGTCCTTAGCTTGGGCTCTTCCAGAAAAAATC
ATCAAAATTTGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCGAAAAATCATCAAAATTTGCCTTGCCCGGGGGGTA
AACCCGTTGTCCGGGGGGCCAAAAGTCACTTTGTCCGGGGGGTATATCAC
TGAAAATGGTTATATCGTCCTACACCCCCCTTTTTCAACCTTCCACATCT
GAAAGATTTGAATCAATATTTCACTCCGATTTACATTTTTTTAAATTTTT
TATATACCAAGTTTTCTACACATAAGACAAGTTTGTTTACCTTCTATTTT
TTTAGAGATCGGAATGTTTTCAGAACAGTGATTGTCCGAAAATGTTCATT
TGCGAAATCGGACGCTGTATCATGATCTCTACAGAAAAACAAATCATCGC
TAAACAGACTGTAAGTTTTCCCTCTCAGACTTTTGTATACTCTGAACAAA
GCTATATCCACCATCCTGACCGGGGAATTTAAAAAAGTGGTAAAGATTGA
AGCACTACTCGATGTGGGTCAATTTGTATCGCAATGAAACTTTACGTTTA
AAATCTTTTTATCGACATTGAGTAGTGCTACCATTCGGGTACCACTTTTC
TTTTTATTAGTGGGAAATTAGTATGCCATTAATCTCGGTTAAATTGTCTT
GATCTTTCGGCCCCGAAAAACAACAACAACAAAAACGTTGGGATGCAGCT
TATTGTGATTTTCACAAAAACAAACTGCGTTGTTTATACATTCATATAAC
GTTATGGCATGTAAACGAAGGGGGAATATTTGAATTCGGTACCTCTAGAA
TGCCTGACGAAAAAGGGTGTAGCTAATCTTTGAAATTTATTTGGGGGTAT
AAACTCATTGACTTCCAATCCCGAAGACCTAGACTTTAGACTCCCAGATG
GGAAATGAAACCACTTATTTCCCATCCAGAACGCTGGCGCGTGGTTTTTA
CATAAACTTCAGATTGAAACTAAAATCTATCACTAAATTTCAAAAAATGC
AGTCCTCAAAATTAAGGGAACCACAAAATACAATCCGTCTTCATGATTAC
AGCGCGTTCTAGGCGCGTTCTGGATGGGAGTGGGTTCACTTTTTCTTCTC
TGGGAAAGGTTAGAGATTCTATTTTAGCCCTTCGGGCTTTAAATTCAATG
GCTAATCCGCCCTTGCCTCCCGGTAGATACGACACTGTACTTAGACTCTG
ACTAAATCCCGATATAAAAAGAGGACAATGAACCTTAATCTGAATCTTAT
ACGCTGCCTTTAAGTTTCTCTTCTGTTGAAATCTCTAACAAACTGTTTGT
TTTATTTCTGTCACAGTGTTCGAACTTAAAATCAAGATGTGCAGTAGATA
GCGATTGTACATGCGCAGAACGATCCATGGTTTGTATCAACACTGAATGT
GTCTACAGTGATTTCCATAATCGAGTGAGTTTTCTTGATTCTCTGATTCA
TTTGTGATTGATTTTTGGATTTTTTCCACCCACGTACCTTATTAGGACCC
CGCCATCGTTCATTAATTTTTGAGCGTCAAAATATTAGAGAGCATCAACT
GTATCTTTTTCTCCAATTTATTTCTGACCAATGAAACTGTATGAGATTAA
TGTTTATGAAAACAAGAAAAGTTTTATTATCGTCGAAAAGAGTTGACGCT
TTCTAATTTTACGTTCTTCAATTCGCTAATGTTGAATATCCTTGTCAACA
AGGGACTCTCATAAACGAAGCCCTACTATTGATAGACAGCTCCCTTAATA
GATGAAAATCTAATCCCCCTCGAAAATCGTAAACTGTACCGTAATTTGGT
CTAATGTCGACATCCCTCTTCTAATCCCAACACCTTTCTTTAGAGATAGG
AATAGTAGAAAGGTCAGAAACGCTTACAGAAACTTTATTTCTTTCCTTAG
CGACCAGAGAGGAAAAAATCTTTTGTCTATCAGTGATTCTGACCTTACTA
TTATTCCTATCTCTAAAACTGAGTTTCGGAATTAGAAGAGGGGTGTCGAC
ATTAGACCAACTTACTCTTGAAAAATACACCTGACTTTCTACTGATTATT
TCATTATATAACTTTGCAGCCGATGCCAGTGATGTGCCGACAACATTCAG
ATTGCAATATTCCATATCTATGTAAAGAGAACAAATGTAAAGAAGCCAAG
AGTTTCGAAGAGCTTATGATATTAACGGCCGCTTATGATGTAGGTGAAAA
ATCCATGGAGTCTCAGGTTGTATTGAGATAACTGGGTTAAGGGTTAAGAG
TGTTTCCGACCCTGGGGGTAATAGGGTTGGAAAATTTCGGGTATGCGCGG
ACCAACCCTTCGAGAGGCTAAATTTGTGCGAAAAGCTTTCCTTGGAACGA
CAAAATTGGCGCAAAAGCGACACTTAAAGAAACCCAAATGGGGAAAATTG
CGACCTTTAGTCTTTTTGTCTTTTGGTCTTTTTGTTCTTTTTCTAACATT
TGCAAAGACTTTTGGGAAGGTCAAAAACCGACTCTTATTGTTCACACATA
CCAATTACGTATTTTTGCCTAAATAGCTCCCGGGGAATTTTCAAACGGCA
AAAAATTACACATTGCTGTCTCAAAATTTTGTTGAAGCATGAATTTCAAT
TCAATGTCTTTTCCATTTTAACGTAATTCTGCTAGCGAGGCAGTAACCGG
TTTTTTAGATTATGTTAGATCAACTATCCATAAGTTAATTGTAGAATTTC
AACAAAAATATCTCTACCTGCTTTTTCTTTCATCAGAGTTGTTCTGGTAG
CGATGGGTGTCCACAAAACCATGGCTGCATGCAAGCAACCCATAAATGCG
TCGCTCTAGATGTCATGCCTAAAGCCAAATTCTATAAGGTAAGAACAATA
ACTTCACCAGTTCTCAATTAGAACTAGCATAGTTCCGGTATTTCGTATTT
GCTAAAAAGAGTTACTGAAGTGTTCCAAAATTTTATGCTGTTTCAAACGA
TTTCATGAATGCAGTCGGTAGAGAAGCGTATTAGTGGTGCGAAATTTATG
AGTTCAAATGTTTTTAGTTTATGATCTACGGTTGACGCTCTCTACATGTT
TTTTTTATAAGCATAACGTTTATAAGCATATGCAGGCTCAGTTTTTGGTA
CCTATACAATGGTTCTACTGCTTAAGAATAATAGAATGCTTAGCACAATG
CGAGCCTGATATAGGGACAGACACTTGCTTATAAAAAACATGTACTTCGA
TTTGTCAAGGGGAATTGGTTTTCAATCGAAAAAAAAACAATAGAGCATCG
TTTTCGAGAGTTTCTTGTTGACAGCGACTTTCAATTTGATCAAAAAATGG
AACTTTTTGAAAAGTAGTGTATGCGTCGAATTTAAGAGTTTCTTGTTGAC
GGCGACTTTCAATTTGATCGAATAAGGGAGCCTATCGAAAAGTAGTGTAT
GCGTCGAATTTAAGAGTTTTTTGTTGACGGCGACTTTCAATTTGATCGAA
TAAGGGAGCCTATCGAAAAGTAGTCTATGCGTCGAATTTAAGAGTTTCTT
GTTGACGGCGACTTTCAATTTGATCGAATAAGGGAGCCTATCGAAAAGTA
GTGTATGCGTCGAATTTAAGAGTTTCTTGTTGACGTGACTTTCAATTTGA
TCGAATAAGGGAGCCTATCGAAAAGTAGTGTATGCGTCGAATTTAAGAGT
TTCTTGTTGACGGCGACTTTCAATTTGATCGAATAAGGGAGCCTATCGAA
AAGTAGTGTATGTGTCGAATTTAAGAGTTTCTTGTTGACGGCGACTTTCA
ATTTGATCGAATAAGGGAGCCTATCGAAAAGTAGTGTATGCGTCGAATTA
GAGAGCGTCAACTGAAATACTGAATTGAAGACACTATTGGGCTCTTCCAG
AAAATGTTCGTACGTGGGGGTGGAGGATATAGTGTCNTGCAATGGTGCAT
ATCATGAATTGGGCTCTTCCAGAAAATGTTCCTACATGGGGATGGAGGAT
ATAGTGTCCGGGGGGTAGTGAAAAATTTACAAAATTTACCTTGACTTGTC
CGGGGGGTAAACTTGCTCTGTTTGAGGGTAATTTTGAATGTCCAGGGGTC
AACTAATGCTTGTCTGGTGGGTTAGACCTAATTTCCGGGGCTTAAAAGTC
ACAAGGTCCGGGGGTTAAATTTCCAAAAACTATTATATCCTCTAACCCCC
ATATTTAAATTTTTCTGGAAAAGATCATTCTCGTGTGGTGCTCTATAGTG
TCTCTTCCAACCATAATACATCTAAACTCTAAACTTTACATTCCATACCT
TCACTTCCAGCGGAACGAGGAATGTATCTACAACAGTGATTGTGCCAAAG
GATTGACATGTAACGGCAATATCTGCACCAAGGATCTGTCTTTAGTAAAT
GTAGGTAATATTCCAGTTTGCTGAGGACACGTTGTTTCCTCATTAACTCC
TTCATTGCTGGAGGAAACTGAAATTTAAGGATTCTTTCAAAACAACGATA
CGTCATCTTCAAATGCAATTTTCTCAGCTTTGGCTTTAGTTAAATATGTC
ATGTGTTTGGGTTCGTTGGAAAGCTCTTTTCGAGATCTATCTGTTAAGCA
TGCTTATTTTTTCGATAATATTCTCAATCGAAATTACCGGCAACCGAAAG
ATTCGTTCATAATTATGAAGGAAATTTAGCTGTACTGAAAGAATTAATTT
TTCTCACCATGAAAATGGTCCAACTTGCAGACTGGTACGTTTATTCAAAG
ATGTCATCGATTTGAAATAGTTTTCGGACAGCTATCCCGTAAGAGAAAGA
AAGCTGAATGAGAAGAATAGATAAGACATTTCAATATTTTTGCAAAATAT
TTTTTATCATACATGTTTTCAATTTCCATTTTAGACTTGTACGAAACATT
CAGACTGTCAAATACCTCAGTACTGCAGTAAGAGAGGACATTGTAGAGAA
GCAGAAACGTTATCACAGCTACACTTATTAACAGATTCGTATTCTGTAAG
TCAAAGAAATCCATGTTTATTCATGACGTAATGTTTTATAATTGACTCTC
TCTAATTCGATCTTCTTGACCCGTGACCAAGAACTTTCTTCAAAATGAAA
TAATCGAATTACAGAAAGTATTTTATTTGGATTTAACACAGGTTAAATCG
CGGTTTAACTTTTATTTGATAAGCGCCACATACAGTATTCGAATGGCTGG
GTGGCCGCCCTCCGCCAACTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTGCAGTTAT
GGTTGTAGGCGATCCTCACTTATTTATACTAATATTGTATTTATCGGGAC
AAATTTTCCCCAAAACTTACTATTCGAGGATTAGCCATAAAATTATGCCA
AACATAAGTACCGACTCACACTTACTTCTCAGCCGTCCGACAACTTAATT
GGTTTCTACCCCTAATCTAGGCCATAGGCAAATGGAAAGTTAGATGCTAA
TTTCTTGCTAAGGGGACAAATATTTTAGTTCGAATTATAGAAAGATTCGA
AGAATAGAGGTTCGAATTAGAGAGAGAGTTTGCTATATACGGAAGCACCC
AAATTAGCCCGGGTGTTTGCCACTAGTTAGATTATTTAAATTTAAAACAA
GTGGCAATCAGCCAGTCTTTTTGGGTGCTTCCGTATAAAACATTACTCCA
CGAATATCACAAATATTTACCCATGATTTTTTGTGATCAATCGACTTCAA
TCATTTGGATATTGACCAAAGTCATACCAAGACACGAATAGAAATCTTCA
TTTTGCCATCAAGTTTTGTTTTGATTTATTTTTCTCTTTGAACGTTTAAT
ATTTGTAGTTATCTATTTCATACATTTTGCTAAAAAATGAAAAAATAATT
CTATTAAATCTGCTAAAGGAGGACAGTTGGCGCTCTCGATTTTTCAGAGA
ATTCGGATTTCTATTCAATAAGGGAGCCTATCGAATACTAGAGCGTCGTT
TATGATTGGGGGTGGCTTTCAACATTATCGAATAATGGAGTGAACGTCGA
ATTAGAGAGGGTCAACAACTGTAACTTATCGAATTGTATTTATTTGTTAC
AGCATTGTTCATCAAACAACGATTGTCCTTCAGCGTACGATTGCGATATA
ATGGCAAAGTGTGCTCTATCAACTGTTGATAATACCTCATTACAAGTAAG
GGTAAAAAAATCCTGACTGACTGAGGACGACGCAAAATCAGCACTTTTAC
CGTCCTGGATTTTGCAGGTCAAAACTACGGATATTAAACTACGGGCTATT
AATTCCAAGTCGCTTAGTACAAGCGTAAAGTACAAATGCATAAACTCGCT
TATATTAATCCCAATAAGATACTACAGTTTACTACAGTAAATATTTTGTT
GACATCCGAATCGGTTTGACACATAGAATAGCTGTTGTAAGCAGTAATAT
CTGACTATTCAATGAACTTTATGAGAGATTATTAATAGTATCCGGGGGTA
GTGAAAAGTGACCCTTAGAGAGACGTATTATGAAAAAACTTTCTTCAATT
TTCGAAAAATATATATTTCCTTCCCTTGGAGACTTTCTACTGATTTTCTC
TTTTCCTCATTTGACGTTTAGAAAACTGACCTATGCATATCAAACGGTGA
CTGTGGTACGCATGAAGTTTGTAAGAATTTACGTTGCGTCAAGAGTTTAC
CGGCTGTGCATCTAGCCTTCGTAAGTACTAATTCATACAATATAATTCCT
AGACTAAGTCGTATAATTCCATAACATAATACATCTATCCACAAGTACGT
GTTTCGTCCTTCGCAGGACTCATCAGGTGCGGCTCAAGTAAGTCGTGGGT
TTCTCAATTTTAGAGATGTGTTTTTCTACCTAGTATGGTAGCTAAGGGTT
AGGAAAACATGCCATTATAGTAAGACCCAGAATCTACACCCACCTAATTT
TTAGTACGCCCTTAAAGGACACTTCAAAAATATTATAGTGAATGCGATAT
TGCAGAAAAGGATCCACTACTTTATCAAAAAATTTGCCAAATGTTATATA
GCCGTTTTTCCTCTTTCAGTGTTTGGTAAACGCTTACAAATCAATATGCC
TCGATGATTCAGATTGTCCATCCTGCAAATCCATACAATTTCATTGTAAA
ATGCATAAATGTTCGTACAAATAAGCGAGACGAAAAATGACGCAAAAATG
AAAACCATAAATGATTGGCGGATAGCTCTCCGTTGGAGCGCTTAATGTAT
TTCCCGATTCCCCGATCGTCAAAGTCAAAGTCGGATTTTATATGAAGGAA
ATATGGCTACTTTAAACAAATCAGACGTCATTAACGACTTGACACTTCCA
ACTCAATTAGATACAGTCTTATCTTATATGACTAGAGAAAATTTTAATTT
GTATTTATCTATACGTTACCTTTGTGAATGACTGACTTATATAATGTATT
TATATTAAATTCGTTTATGAATTTACAAATGATAATTATTTTGAACGAAA
TATATTGACAACAAGAATTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003672TCONS_00003672Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003672-proteinTCONS_00003672-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:766564..776135 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.87	10.69	8.61	5.98	0.27	0.06	0.33	0.62	1.04	1.14	0.23	0.73	3.26	3.8	1.83	1.77	8.46	14.46	6.5	7.38	10.82	9.78	5.17	9.78	4.03	2.73	0.55	0.38	0.48	0.55