XLOC_002188 (gene) - C. hemisphaerica

Overview
NameXLOC_002188
Unique NameXLOC_002188
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000038:550172..558248+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002188 ID=XLOC_002188|Name=XLOC_002188|organism=Clytia hemisphaerica|type=gene|length=8077bp|location=Sequence derived from alignment at sc0000038:550172..558248+ (Clytia hemisphaerica)
attttttaatacgtcgttcattaactcaaatcaaatgactttggagattC GGTgtaatggtggccgaattgccgtcccatgttttgtcagatagtcccaa gttagagcagttgacgttactattcctatctctaaagaagggtgttgaga ttagaagagggatgttgacattagaccaagttacggtaaaaTATATTGCC AGATTTCTAAAAATATGTCCTGGGAACAAAAGAAAGTGCtactttcaatc tgtcattctgAATGATGCCCGAATCTTTACTTTTCTTGAATAATATAATA TACAGCAAAGGCGAACAAACATTCTTATATATTTGATTTGTATATTACAG ACCTGCCAACTCTTGCGCATTGAGCGTGAGTATTTCAACATTGTCtcatg caatttttgaaaaacttgatttctCATGCACTCACAcattattgattttt gaaaaaactttctctgatttcccgaattttggcaaaaaagtcTCCCTGAT TTTccaatttccgaaaaaaattttccctaattttccaattttcggaaaaa agttttcccccgatttccccgatttcgGAAAATTGGAAAACCGGGCTACA ATTTCAGATTTGACttggaaatttttatctcatgcAAAATGGACATCTCA AGTTGGCAGGTCTGACAGGGTCTCATGATATTTGCGCGCCacatttccgg aaacaagactaTTTCTTTTTATTGGCCTGAGAAAACCATGACCAGACATA TTAATTAATTGAGGCGTATGCATGTTTCCCTCCAGTGATGCAAGATTTCA CTCCAGGTAGGATTCAATATCAAACAGGTTGCctttaaacattttaaaac tatATTGTTTTTTCCCATCCAGATTAAATTAGAATAACatattatttaca aaaaagaaGAGGAGAGTTTTCTTTAGATCAAATCAATGTGGAGACAAGCT TGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAACTT TCTTAAAGGAGTTTGGGGTATGTTTTTTATATATACTATAAAACTTTAAC CACCGCAATAATACCTACCTCGATGCCTACTAAATTTTTGAGGTTATTTA AAGTTTTAATCTAAATTGAACTGAGTTTATATATGTTTTATCATTCGATT CACTGAATCTAGTCATGGTCATGGCGATTCCTTACATAGACTTATTTTGA TTAACACAACAGTTGTGTTAATCAAAATAAGTCTATGTAAGGAATCGCCA CAGTTACTGTGATttattgaaattgttttgatttaataaaCAATCCAGGT CGAGGTAATTCAACCCTCTCAACAGCCATTTACTCAAGCGAGATGAAAGT AAAACTATTACCAGCCCTTCAAGACAATTACATGTACATGATCATTTGTG AGCAATCACGAGAAGCTGCTATTATTGATCCTGTGGAACCGGAGAAATGC TTGAATGcactaaaagaagaaaatgtcaaattgACACACATCCTTACTAC TCATCATCATTGGTAAGAAAATTCAgattctttttcttattttaagaTAA GAGTCTTTTTAAGACTATTGCTTAAAAAGCAACATTTAAAGCTCAGTGGA AAAATGTTGAACAAACCAAACCCAAGGTTGCTGGTTTTTAGACATTTTTA GATAAGGCTTTTATTGTTCTAGCTATACAGAgctatattgaaaataaata tcatTTGAGATTGCTAAGTGAAATTACCAGACCATTACCAAACTGTGTGG CGAggtagctcagttggtagagcatTCGCTTTATGATCCAAGGGTTGTGG TTTGATCCCTGGTCACTGCCAACTCAGTGAATAAGAATcatagattgggt aatctggtCTAACTGTACAATCAtggtgttgaaatattttgaaatattag tgtattttaacgtttttcaggatttaaagTTTGGACGAGAATTGCTTTTG CAAtggcacttccactttctttcattcaatatttcgattttggaggggtt cggtggctttTAGGCTACATTCCACGCCTTATTGGAGCagattttaatct tttaaatcctgagGTCCTATAAGGTCCCAAGTCTTAAAAGTCTCATGCTA AAACTcggagttaaaactctacttcccaactgtagtttaatgcgcttaaa aatcatttgtgatGTTTAAGATTTTGCAGGAAAATCctctttgtctcaaa tattttgtccatgattgtaggtaAGTCACTAGGAATTTATAGTAGGTGTG CATTCGACCTCCAAGGTCTAGGGCAGATAGAAAAAGGGGAAGGATTCCAA CACTCCCAGCCTATCGACAGCCACCAAAAGAATATACTTATTTTACTTTA CTTAATAATGCTTTAAAAAATACAAGCTGCTTGTCAAAAGTCCCTTCAAC CTAATACAGATTAACTATCTGCCTGATTCTAAAAAACCTACTTGTTTGCT TGACAGGGATCATGCTGGCGGAAATGAGGAGATGTGCAAATTGGTCAAAG GACTGACTGTGTGCGGTGGCGATGATAGAATTGGTGCTCTCAATAAAAAA GTTGAAGATGGTGATAAACTTAAGGTTAGTATATTCTGCTTTGCACTTAA TCTCTAAACAATGTAGACAGGAAACTCGTCTCTTTTCAGtgcagaaattt tgaaaaacactggAATTCCATATTCAGCAGATACAGTTTCTCTCATCACT ACTTAAGATAGGAGAATTTTAACCAGAGTTTCCCGGCTGAAAATGATAAT GTTTTGCTGTTGGCATAGCCTACTGTATGTAcgaaattttatttgaattg aatttaatgatTTAAATTTTCCAAAGCCCCTTCCCCTAGGGCAATAAAAA TGCATTTCCATACAATAATTATATTCCTTCTATTGAATTTGTTATTTTGG CAAACCAAATGTGTTTCAACATTTACTATCACGTTATTTAGGTGTTCAGA CCAAAACAATGAACATGATTACAATTGTTTGTGTTTAGATCGGTAACCTA GATGTCACGTGTATTTTTACGCCATGTCATACAATGGGTCATATTTGTTA TTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTTCACAGGTATATATC TTAATCATATATAAGACACGATATAATTAATAAGTGTTTTATTTGCATCA TCTAGTAGTTATTTTTGCTACAAACAATGAGATTACTTTTCAATGCGATG CTTCAATAACGGTTCAAAACATTACTCTCATTATCCCTATCCTGATTTGA AGTCGTGAAAGACAAGAGTATAATCCTCGTAATTTATTTTTGGTGCATCT TCATCTTTAAAACTTGTATGTATTTTGATAATTGATAATAATGATTGTAA TAATGCATTATTAATATCTAATGACGAAAAAAAGGGCTACATGAATCTAA TATTTCTCTTATATTTTTAATCATAGGAGACACATTGTTTGTAGGCGGTT GTGGGCGGTTCTTTGAAGGTACACCACACCAAATGCATGAAGCACTCATT GAGAAATTATCAAAACTACCCGATCATTGTGTAAGTATAAAATAACTGAG GTGTGCTATATAGCGTATCAGAAGGTACATAGGGTGGTGACACAAAGCTG TGTTTAAAATCATAGGATTGTTTTTACAGGATACACATAGCAATAAagct attttttgagaaatatttcttttttagaaaatttattttcactCATCAGT ACACTCAGTTTTGAGAGATTTAAGGAATAACTTATAATATCAAACTGTTC CAGTTAGTGTATTTGGTTAACCGAATGTATTGAATAATTACATAATTTCT TACCTTCAGAACAAAATGATGTAATTGTTTGAAATTCTTTCagttaaaac tttaaaaaaagatttaaccCTACAACTCTCTACATTTTCTTACCTTTTGT CTTTTCTTAGAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTAC AATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATG GAGTGGGCAAaggtttgaaaatttgatttattcGTTGATCATTATGTGTA ATTCTTTTATATCAACGTCTATTCGCTTATTGAAGTTATATACCACTGAA AATAACTTCAAAAATgcagaagaaaataaaaaaaattcatttgatGAAAC TTTATTTTTGGTATAGAGGTACCTGATTTCAGCTATACAATCGCATCTCT CTAATTCAATTCCCAAGGGGCTAAATCATTTCTTCGAAtaagagattcga attatagagagtgttTTGGAGTGCTTTTCGACTAAAGTGACCAACAATGT TTAgtcgaattaaagaaaaatcCAAATTAAGAGGTTTGGgtattattttt cattcaaaattattACATAGAAAGTTATAGCTTCCAGAACGTAGCAGAAA GTGAAACTTTGAAACCTATTCCCAAATACCAAACTACATTACCATATGTA TTCATAAACATAAaaatttctcttcttttctgttCAGGGTCGCAGAGAAA GAAATCTTCCAACAATACCATCTTCTTTAAACGAAGAGAAGTTATACAAT CCTTTCATGCGAACTAGGTATGATGAGTAGTAAACAGTGTACTCtcaggt gccaaataaacggggggggagAGAGTCCTCGAATAAACGAGATCGGAAGA GCGGTTCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNcgcacgatgggttattttttcttatttg gcacgccctcaaagagagcaattaatcgttaattgcatcctgtagagagc aattaatcgttaatcacactctctaatgcggcgccaatgtttacgaaatt gattttaatattttttcttacattttttttcgcatcgaacgttttaattg cattcgaaatttattttgtgagagagaaaatcaataaacaacaacaaaag aaatacataaagagaagagaaaaatataaaactctcagtgtaatttctgt aatttactttcctaactgggaaaaagtagtgacagccattgtgcgattag ctcgtaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGTTtgtttggcacctaagagtaaactCTAAATTGAT CTATTTTCAACATGATGGTGAGTACTTCAGTTGATGATAATATCTCGACT GATAACCTAGATAGGCTTGGCCTCATTTAAAGATACTTTCATAAATTGGA TGACTAGACCGTACCAGTCATTGCAAGAATAATAAGATACTTTCCTTTGA TCAGAACTGTAAGTAACAAATTCaaaagggaacttattttgacgagaact aattttgtTGGCGAGTAACGAAAATCTTGAAAGTTTTTAAtattggcgag aactaattttggcgaattttctCTAAACTCGCTGaattgccaaaattagt tcttgccAAAATGTGTTCCCTTAAGGATTTACATTAAGGAGGTGTGCAGT CTTCCCTTATCTCTATCTGGGCTTTGGACAGATTTGGTAACTACCCTTCA GTATTTCTTTCCTGGTAGATTTTAACAAATTCTGGTCTTTCTTTTTATTG CAGTCAACCAGCTGTTCAACAACACGTCCAATTGACGGATCCAATCGAAG TGATGGGTGCtattagaaaagaaaaagatactTTTAAACCCAAATAAAGA TGATATGGTTAAGGCTATGGTGTTATTGTTCATTCAAGAAAACGTTTTAG AGGATGAAAATGACTTGAGATCAAAAGCGACTCTTGAATCAAACACCTTG TCAATTCCTGGGAATTAGTTGACAAGTTCAATGAATCTAGAAGATGTGTG ATGTTTATTCGAAGTTCACTGGTTAAATGCAACCATGTCGCCAGAAACTC AAGCACATACCCTGTCTTCGAAATTGTATTTGGACGAAAATGGATGAAAG AAGGTCTAGAAGAATTAATGACGTTTAAAGGAATATGCAAAGGAGACTTT TTAACCTACTTTACACACATAATTTACACAAGACACAAGCATGAACACAT TGAGTGAATCCACGTTTATAACATAGAACATGTTGCTTACCGTATTTCCT TAAGTAACCGCCGCGTTGCTCTttagatttttaagattttgggtgcggca aaattgaaattatcttAAAGTGATGATGGCCGATTTTTGGCGGAGGATTT AATTTGgggatttttgccaaaattcgccaaatctgACCCccaccaaaatt tatccacttatgTCAGCTATTTTGCACCCTGGGTGTAAACTATTTTACAC CCTGGGTGTAAAGAAAAGCACAAATTTCACAACCAGCTATGCAGTTTTTG CACTTAAAACTGGTATATGCTTTATTTCGATAGCTCCAATCTTCCGTAGC ACAAACTCCTTGAAGTTCAAAGGGATTAGGAATCTATCGAAAAGTCAATG ACTTTCTAATAAGttctctcgggtacctaataagcgtccccctgattaat ttttcgaaaattttcctaccAAGGCATTCTCTTTCCAatccccccctgct tattaatttttggaaaatgctTTTTGGAAGTTCACTCTTTTGCCCAAATT CTTGCTGTGTTGGCCtccattttaaaaattttccacccatgacattttta ttcatagaaaaacagccataacttttgatgcattaatttagaagattttt ccgaaaaatttaaaacagttcaattctttgcggacagtttgaaaaaactt cgaaacaaaaaagttaattacccattaaaacttagcactttttatagaag gaggtgatgcaacatatcattaacgtctttttaaagttcacaacgtcatt tttacaattaaattcttaattactcttaagagatttgattaaaaagcaat ttataaaggcaattctttgtcaaaagtgttaaagaacctaaaaagtaact tttatgttcaaatacttaaatcaatttttcgactatggtcagagccccta agttttgtgattttttcaCCAACCCCGATTATTCCAAAAAACCCAATTAT TAGGAACCCGAGAGTACCGCTTTCTGGGGCACAGCGCGCCTTCTACTAAC TTCTTGATTAAGGTATGGTGCCTGGCGCTCTAAACATAGGAAATACAGTA ATCATATCTTAGATTCATGAGCTTAAAAGAAACTTGTACGTTAAAAGTTT GATAccaattgaaaaagaattaaatGGTTGAAAATATATAATCCGTTTTT GTACCCgttaattttgacgttcacGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003909TCONS_00003909Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003909-proteinTCONS_00003909-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:550172..558248 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HAGHhydroxyacylglutathione hydrolase, mitochondrial isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.86 24.79 13.03 10.31 48.47 37.18 82.87 87.15 60.72 47.41 51.57 42.76 38.67 40.8 32.08 32.53 54.05 55.58 42.32 43.55 56.35 53.94 39.1 42.69 47.82 51.47 25.5 23.46 34.05 29.31