XLOC_002205 (gene) - C. hemisphaerica

Overview
NameXLOC_002205
Unique NameXLOC_002205
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000038:418950..420962-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002205 ID=XLOC_002205|Name=XLOC_002205|organism=Clytia hemisphaerica|type=gene|length=2013bp|location=Sequence derived from alignment at sc0000038:418950..420962- (Clytia hemisphaerica)
ATTATTTTGTATGTTAAAATAATTAGATCAAACAACTTCAGTTCAACCAA
TACCTCTTGGGAAGTTTTAAGAATCTGATTGCAAGGAATCACCAAAGTAT
TTCATTTTTTTAGAACACTGAAAATTAGAAATATGACTTTAACAAATACA
AATGGTATCTTTTTCAATGATGTCTCAAAACTCTGTGTATTGGAACCTGA
AGTGAACCAACAGACTCATGAGCTCAAAACAGAATGTAAAGATTTTGTTG
AAAAAATATCAGAATTTCAAGGTAAAAGGGTTGTCATCAGAAAATCTTAT
TGATTTTTATGTTATTACGCGGTAGAAACTTTCCATCCATGTGTTTCGAA
ATCTTGCTAAATGAACAAAATAGCTGTAAAATGTTCAAAATAACTTCATG
TGGAGGATACTTGAATATCTTTATAACCTCTAGTTGAAAATTTCAATCTG
AGTTTGGATTGATCCTTGAAAAAAGGATGCGTGTAATCACAGCGCAAAAA
TTTGCTATTTGCTACTATATTGAATGCTCTTGACGGTCTTAGCCCTGCTC
GCAGAGTGGATAGTATGTTTCCCATTGTTTTTTGCCTACTAACGGCTGAT
AATTGCGAAATCGTTAAATAAGGAAAAGGAATTGTTCTTAACTTGTTCTT
ACGTTGAAATTCGAAAAGAGGCTCTACTTGGTACCATGAGGTTATCTTCA
TTCTAAAAATCTTTGATTACACCATTTTTTTATATAAGTAACTCCAATAT
TTGGGTCAGGCCTAGTATTGCTTAGCATTCCAGCTACTTTTCTGAAAGAA
TTTGCTTTTACCACTACATCACTACATTTTAAAACTTATTGGGCCAAGGG
CTATACATACTTTAATCGGATTAAATTTCGCGAGCTAAAAAAATCGCGAA
ATTTTCTGGATTTAATTTCGCGAGTCAGAGTTTTGAAATATTTCCCGTGG
ATATAATTTCGCGAATAAGCCAGAAAACAGCTGAAAATAGCCATTTTTTG
CCATAAATGGAGACTTGGAACTAGTTTCTCCGCCAAAAATACAATTTTAA
AAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTATCCTTTATTTCGCTG
ATCATTGTATTAACGTCTTTGGACTTCAGTTGAGTGATTTCTACGTCCTG
GGCTTTCATTATATTTTCGCAAGCTTTTATCTGAAAAAGTGTGTATNGCG
AATCAGGAATCTCACGCGTGTTCGCGAGTTTTAATTTCGCGAAAATGGCA
AAAATTCGCGAAATCGCGAAATTTAATCTCGCGAAAATTTATCCGATTAA
AGTAACCATGGTATTATTCTCTAAATAGCATTTACTTTTTAAAGATAAGA
TAGTGAAAGAAATTTGAAAATTTCAGGGTTTAAGCTTTAGCAACACGGTA
CAGTTTTAGCGCAAATCGCCAAGAAAAAATGTGTATCTCTTTTAATAACT
TTTCCATCCTTAGGTATTGTGGGTGGTTTTATATCAGTTGTTGATGGTTT
AGCAAAAGGAGTCGAGAAGGAAAAAATGAAAGCGATAGGAGCACGAAATT
CACTCAAATCGATGACTAAACAGAGAGAAGCCCAACAGCAACAGTTGAGA
GCTCTTATTGCAGAGAAACAAACACAATTAGAGCGATTTCGACTTCAGTA
TGAATTATTATTGAAACAAGAGGCTGAACAGAATGATTTTATCGAACAAT
TCATGATGCAAAAGTAAAACGGACTATCTTTTGGGAAACTATATTTATAC
TGTGGTATGTGTCCTTTTAAATGGAAAGCTCGAACATAATTGGAACATTT
TAGAGAGAGACTACCTTAAAAGAAGAAATTTTGGCGGAAAGAAAATTTGG
CGGATTTGGCGGATTTGACTGAAATCCGCCAAATTAAGTTCCCGCCAAAA
TTTCTTTTTTCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003944TCONS_00003944Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003944-proteinTCONS_00003944-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:418950..420962 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IFT20intraflagellar transport protein 20 homolog isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.98	41.63	59.21	63.32	187.48	147.46	108.06	105.63	68.9	64.53	51.19	46.85	24.96	21.86	16.93	18.54	25.12	32.26	28.32	26.77	38.39	30.02	28.43	31.51	66.16	61.61	45.77	38.44	27.54	27.78